>input_sequence_86414
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------------------------------------------------------------ATGGCAACAATGGGCGTGGG
CGGAGCGGTGAAGATGATGATCGGGGCGAAGGAGGAGCGGGTGGTGGGCACGGGCAAGGCGCCCGGCGCGTGCCCGTCCT
GCGGCGGCCCGGTGGTGGCGACCGACGTGGAGAGCGAGCGGCGCATCCTGTGTCTCCCGCTGTGCCTCAAGAACAAGCGC
AAGTACTCTTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCTAG-----------------------------
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>chr2A_1_TraesCS2A01G432400
TCATTGTATTTTTTCATCGTTCTGTTTTTCGTATGTGTGTGTTGAACTCAATCCATGGCTTGTAGGGTGACGAAACACTA
CCGTTTAGACTAACTAATTTGTATACCTTGGAAGGACGGTTGGAACTTCACATGATTAAAGCGTGGAGGCTACTTCCAAC
AACAAAAATTTATGGAGACTGCGTTTTTTTTTGCTTGTGAGTTTTCCTGTTCAACAGACCTAGAGTTACATTGAAGTGGA
GTAATAATGAATTAAAAGAGAATTCGACATGGAGTACATGACACTACATGCAGTAGTATACTGGCGGTGTACGGTTTTTC
GGCAGCCGGTAG--------------------------------------------------------------------
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-----------------------ATATTTTTTTGGCAGAACGGCCGATGTTAATATGTTTCTTAAG--------------
-------------AAAAACAGATGTAGACATGACAATTTCGAATTATATAAATGCAGTATTATCTTGAACTACTGGTGCC
TGGCACGTGCATTTTTTGTCCATTTCTCAGTACTCATGACTAGTAGATTATTTTCAAACGAGATACACTAGCGGTTTGTC
TAAAAATTTAAATCAGTGCTGCTAGCAGCAGCTACTTTACCACATGGTCCATGTGGTAAGCAAACTATAAAAAAAAGCAG
CTGTTACTTTTTTTAGACAACTTTTTTAGGGGTTCTTTAATGGTTTTTTTAGACAACTAGCAGCTGCTACTGTAGCGTGT
ACTCCTCTACTAGAACTGGAGGGCCGCACATGGGCTAA---GCCGCCCGTGGGTTGCCCAC--------ACTCGACCAGG
TAAAAACCCAAATGGGCACCAACACCAAGCCTGTCGCTGCCGCACGCGCAAGCGCAGCGG-------TCCGCGCACGGTC
--CTG--CCTGCGCCCTCGTCCCCTCCTCCGCTATATAACGGGGCCTGGCA---------------TGCCATC-------
-----CCCGGCACCGGCCACTCAAAATCCCCAGACTTTCCAGACCC------AA-AATCCCACCTCCCTCCTCCGATCCC
CC--TCTTCTTCCACTCGTTCCGTTTCTTGCGACCGAGGGGATCGTCGATCGATC----GATGGCAACAATGGGCGTGGG
CGGAGCGGTGAAGATGATGATCGGGGCGAAGGAGGAGCGGGTGGTGGGCACGGGCAAGGCGCCCGGCGCGTGCCCGTCCT
GCGGCGGCCCGGTGGTGGCGACCGACGTGGAGAGCGAGCGGCGCATCCTGTGTCTCCCGCTGTGCCTCAAGAACAAGCGC
AAGTACTCTTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCTAGC------TCGGGCTTCTTCTATTACCG--
ATCCATCCATGGT-----------------GACG---T------------------------------------------
--------------------------------------------ACGGAGGGAATCAGATAATCCGCTCGAGTTCTTTGG
TTCTTC----T------------CGGCCCTAGAGTAGCTTGCTAGCCTGGCTAATGTAATGTAATGGTGATTCTGTGTTG
ATTCCTCT--------------AGTT----------------TC------------------------------------
------------------------------------------------------CTAG------------------TAGC
TAA--------------------------TTTGGTGAAGCGCTGGAAAACTGGCACTCTGCT------------------
-----GTATCTTGCAGTAAGCTCTCTGTCAATGGT-----------TCCGCTTTAATGCACCGGCCTGTATTG-------
-----GAAATCTCT---AATGCGCTT---------------CCTTCATTAAGATGGTACAATTAACGTACTGATGGGACC
ATCATGGACAC-------------GCAGATACGCAAAAGTACATTGGCCCGTCTCC----ATCGATC-----------CC
CAAAGCCTCGATCACTGCAGTGATGCACAG---------CTACGGAATCACTG--------TCGCTGCATGCATGTATTG
TGCTGATCACTA-------CTGTACATAGTAGCAGCCACAAATCGACGGCGACGCCAGCCTTTGGCCGG---------TG
TGCATGCTC---CCACAACCACAAGCCACAGCAACCGGCCGGCCGT------------CCGTCCGTTGGTTACCTGTTCC
TTTCGCGGG--TATCCCGTACGCCGTACGACTAAGGCCAATTCCAACGCACAATCCCATCCGGCCCGGACGTATTCGTTT
TGGTTCAAACGAACAGACGGCACGGCCCGACGCTCGACCCCATCCTTAATTGTCCATTTGCTATCCGGTCCGTCCCATTT
TTGACGTAAATTTACACCTGATTTACGTCCAGACGGACGGCGAACGGACGCCCATGCGCCCGTCCCGCGTCCGCCTCGAA
CCCGCATGATAGCCGCCCACCTACCTCCCACCGCCCGCATTTACGGCACACGCTCTTTCGATCCCACCTCGCAACCACCC
GGCCAAGCGGTTGTTATCCTTTTTAATGTGGAAGCCATGAACGGGTAAGTCCACACTTTCACACCCGGTGACATTTGCTC
CCTCAAAACCCGATACTCATCAAACTCTAGCTCCGTCCGCCTCCTCT
>chr2D_3
ATTGTATTTTTTTTCATTGTTCTGTTTTTCGTATGTGTGTGTTGAACTCAATCTATGGCTTGTAGGGTGACGAAACCCTG
CCGTTTAGACTAACTAATTTGTATATCTAGGAAGGACGGTAGAAACTTCACATGATTAAAGCGTGGAGGCTACTTCCAAC
AACAAAAAATTATGGAGACTGCGTGTTTTTTTTTTGTGGGG-TTTCCTGTTCAACAGATCTAGAGTTACATTAAAGTGGA
GT---AATGAATTAAAAGAGAATTCGACATGAAGTACATGCCACTGCATGCACTAGTATATAGGCGGTGTATTGTTTTTC
GGCAGCCGGTAG--------------------------------------------------------------------
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-----------------------ATATTTTTTTGGCAGAACGGCCGATGTTAATATGTTTCTTGAAGTCCCCTAAAAATA
TGTGTTCCTCGAAAAAAAAAGATATAGTCATGTAGTAATA----------------------------------------
-------------------------------------------------ATTTTCGAAGGAGATACGCTAGCGGTTTGTC
CAAAAATGAAAATCAGTGCTGCTTT-------------------------------------------------------
------------------------------------TT-------------------TAGCAGCTGCTACTGTAGCGTGT
ACTCCTCTACTAGAGTGCAGGGCATGGGC------------GCCGCCCGTGGGTTGCCCACCCTGACGTACGCGAGCAGG
TAAAAACCCAAACGGGCACCAACACCAAGCCTGTCGCTGCCGCACGCGCAGGCGCAGCGGACAGCGGTCCGCGCACGGTC
--CTGCCCCTGCGCCCTCGTCCCCTCCGCTATAT----------------A---------------TGCCATC-------
-----CCCGGCACCGGCCACTCAAAATCCCCAGACTTTCCAAGCCC------AAAATCCCACCTC----TCTCCGATCCC
CCCTTCTTCCTCCTCTAGTTTCGTTTCTTGCGGCCGAGGGGATCGTCGATCGATC----CATGGCAACAATGGGCGTGGG
CGGAGCTGTGAAGATGATCTGCGGGACGAAGGTGGAGCGGGTGGTGGGCACGGGCAAGGCGCCCGGCGCGTGCCCATCCT
GCGGCGGCCCCGTGGTTGCCACCGACGTGGAGAGCGAGCGGCGCATCCTGTGCCTCCCGCTGTGCCTCAAGAGCAAGCGC
AAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCTAGC------TCGAGCTTCTTCTAGTACCG--
ATCCATCCATGGATCTATCGATCGACTAGCGACG---T------------------------------------------
--------------------------------------------ACGGAGGCAACCAGATAATCCGCTCGAGTTCTTTGG
TTCTTC----T------------CGGCCCTAGAGTAGCTTGCGAGCCTGGCTAATGTAATGTAATGGTGACTCTGTGTTG
ATTCTTCT--------------GGTT----------------TCT-----------------------------------
-------------------------------------------AGGGAGTACTCCTAG------------------TAGC
TAAATCTAAGCTAATTTGGTGGGCGTGCATCGCGTGAAGCGCTGCAAAACTGGCACTCTGCT------------------
-----GTATCTTGCAGTAAGCTCCCTGTCAATGGTGGCGGGGCACCTCCGCTTTAATGCACCGGCCAGTATTG-------
-----GAAATTTGTAGCAATGCGCTT---------------CCTTCATTAAGATGGTA--ATTAACGTACTGATGGGACC
ATCATGGACAC-------------GCAGATACGCAAAAGTACACTGGCCCGTCTCGATCAATCGATC-----------CC
CAAAGCCTCGATCACTGCAGTGATGCACAG---------CCACGGAATCACTG--------TCGC----TGCATGTATTG
TGCTGATCACTA-------CAG----TAGTAGCAGCCACAAATCGACGGTGACGCCAGGCTTTGGCCGG---------TG
TGCATGCTC---CCACAA------GCCACAGCAGCCGGCCGGCCGT------------CCGTCCGTTGGTTACCTGTTCC
TTTCGCGGGCATATCACGTAC-----------------------------------------------------------
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>chr2B_3
--ATTGTATTTTTTCATGGTTCTGTTTTTTGTATGTGTGTGCTGAACTCAATCTATGCCTTGTAGGCTGACGAAACCCTA
CCGTTTAGACTAAATAATTGGTATATCTAAGAAGGACGGTAGAAACTTCACATGATTGAAGCGTGGAGGCTACTTCCAGC
AACAAAAAATTATGGAGACTACGTTTTTTGC-------GGG-TTTTCCGTTCAACAGATCTAAAGTTACATTGAAGTGGA
AT---AATGAACTAAAAGAGAATTCGACATGGAGTACATGGCACTACATGTAGTAGTATATAGGCGGTGTACAGAGTGAA
CACAAGGAATCTCCTACACAGAAAATCTTTTCACCTACCATCATATCAATGTGAGCTCTGCCAATCCAATGCTAAAGAAA
TCTCACTACATCTTTTTTGGGACCGTGACTTTGCCTCAAGTTGCTGGGAAGCTCTCATTGGTCACAGAAACAGAGGTTTG
TCACCCTATGGCGAAATTACTCTCTTGGTTAAAGCCCTTCCCACATCAATTGCCATGGAAATCCTCATCATGGGATGTTG
GAACATCTGGATTCAAAGAAACGGGAAAATTTTCAGCGCCAGGCAGCAGTCCATTCAGGCTTGGGAGAGACTGCTGAAAC
ACGATCTCCTGCTTCTCAAGCATAGAATCAAGTCCAAGTTTGAAGCCCAATATCCAGTTTGATTGATCAGTTTCTCAATT
AAGATCTCTTAACATGATGGGTTTTGATAGAACAGGAGTTGGTTAACTTGGTCCTTTGTGGCTTGTAACTTATTGTAAAT
ACTTTTGCTTTTACTAGCAAACATGCCCGTGCGTTGCAACGGGAGATTTTTTTACCTCTCATACACACTCTTGATACATC
AGCAAATCTCTTGAAATCGTGCACGATGCCACATGAAAAACAACATGATAAGTGATGATTTTGAAGTGTATTCAAGGTGT
TTCCAATTTAGACAATATAAATATCTATCTAGTTGCAGGTATATCTTTACGCATTTGTTGTCGTTCCTCCTCGCTGGTGC
CCAACAAATATTTGCATTACGACGAAAATACCAACGTATATTTTATTATTTCATGATAGCATTTGCATAAGAGCATTATT
TATGCCTCCTTTATATATGTGCTTTTTTTGTAATCCAAGTCAAATCTTAATTTGGTTGCAAACATATTAGGCAGCTCCAT
AAAAATCAATCAATTTGTAAGGACATGCATAGCAAATGTTCAAGGTTGCATATCAACATTGATATTCTTAAAAAAATGAA
AATAAATAAAACAATATGAAAATTAAAGTCAAGCCATTGGTTTACGTAAAGTTTGTATCAGCAACATTGTACATTTTTTA
TACATCAGAAACATTTTATATATACACATTTAATATTTTCCAATTTCATGGTCAACATTTTTTAAAACATATTTATTTTT
TATGTCTACTTTTTATACATATTCTATATTTTTTGTATACATCAGGAATATTTTTCATATACACGTTTAACATAGTCCAA
ATACATGATACTATTTTTGAAAACTTATTTTTTTTATGTCTGCTTTGTTCCATACACATTATATATGTTTCTATACATTT
TTCTTATACATCAAAAAACATTTTTTGTATGCACATTTGACATTCTTTAAATATATGATTAACATTTATTAAAGAATGAA
AAATGATAGTACTATTTTTCTATACGCGCTGTACTTTTTGGTATATAATGGAATCATTCTTTCTATACATGTTTGACATT
TCTTTAGTGCATGATTAACATTCTTTGGAAGTCTGCATATAAGTGATTTTTATGATTAAAATATTCATAGTATTTCGAAA
TAAAGCCAAAATAAAAAAATACAGAACATATGTAAAAAAATGTAAGAAAAATAAGTGCTAAAGGCCGCTCTGGGCCGGCC
CAATCGGGCATCTGTCTAGAGAAAAGGGGGAGCAAAAAGGGAGTAATAGAGAAAAAGGGGAGATGGGGGATCAAACCTGG
GTCTTATAGGTGGAAGAGAGAGAGTCCAGCCAGTAGGGCGGCCAAGCCCCTGGCATTTGGTGGGGGATCAGACACTATTG
AACCAAAATCAATGACCGACTAAAAAAATAATCGTTTTTTCCTGTTACCAGGGGCATAGGCGGGTAAATTATGTGAACTC
TAGGGGCAAATTCCGTGACGTACGACCAGAAACCCACTTTTCTTTATTATTAGGTGAAGATTAATATATATACCGCAGAA
CGATTGTTCTACGGGTTTCGGTTATTTTTTTTTGGCAGAATGGCTGTTGTTAATATGTTTCTTAA---------------
-----------AAAAAACGAGATGTAGACATGATAATTTCGAATTATATAAATGCAGTACTATCTTGAACTACTGGTGCC
TGGCACGTGCATATTTTGTCCATTTCTCAGTACTCATGACTAGTGCATTATTTTCAAACGAGATACACTAGCGATTTGTC
CAAAAATTTAAATCAGTGCTGCTAGCAGCTGCTACTTT------------------------------------------
--------TTTTTTAGATAACTTTTTTTAGGGGTTATT-------------------TAGCAGCTGCTACTGTAGCGTGT
ACTCCTCTACTAGGACTGGAGGGCCGCACATGGGTTAAGAGGCCGCCCGTGGGTTGCCCACCCTGACGTCGGCGAGCAGG
TAAAAACCCAAACGGGCACCAACACCAAGCCTGTCGCTGCCGCACGCGCAGGCGCAGCGGACAGCGATCCGCGCACGGTC
--CTGCCCCTGCGCCCTCGTCCCTTCCGCTATAT----------------A---------------TGGGGCCCTGCCAT
GCCATCCCGGCACCGGCCACTCAAAATCCCCAGACTTTCCAAAGCC------AAAATCCCAACCTCCGTCCTCCGATCCC
CC--TCTTCTTCCTCC--------TTCTCGCGGCCGAGGGGGTCGTCC----ATC----GATGGCGACAATGGGGGCGGG
CGAAGCAGTGAAGATGATCTGCGGGACGAAGGTGGAGCGGGTGGTGGGCACGGGCAAGGCGCCCGGTGCTTGCCCGTCCT
GCGGCGGCCCCGTGGTGGCCACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAACAAGCGC
AAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCTAGCCGGCCC-CAAGCCGCTGGTGGTGGTGCC
ACCGATCCATCCATCCTTCCATCAACTAGCGATGTACT------------------------------------------
--------------------------------------------ACCAAGCAAATCCATTAATCCGCTCGACTTCTTTGA
TTCC----TGTTGGCCGTGCTTACGGCTCTAGAGTAGCTTGCTAGCCTGGATAATGTAATGTCATGTTGATCCTGTCTTA
GTTCTTCT--------------ACAGTGTTTCTAGGGAGTACTC------------------------------------
------------------------------------------------------CTAG------------------TAGC
TAAATC-TAGCTAATTTGGTGGCCGCGCATCACGTGAAGCGATGCAAAACTGGCACTCTGATGTACCA------------
-----GTATCTTGCAGTAAGCTCTCTGTCAATGGTGGCGGGGCACCTCCGCTTTAATGCACCGGCCTGGCCAGTATTGGA
AATTCG-------T---AATGCGCTT---------------CCTTCATTAAGATGGCA--ATTAACGTACTGGTGGGACC
ATCATGGACAC-------------CCAGATACGCAAAAGTACATTGGCCCGTCTCC----ATCGATCGATC-------CC
CCAAGCCTCGATCGCTATAGTGATGCACAGTAGCAGC---CACGCAATCTCTG--------TCAC----CGCATGTATTG
TGCCGATCACTA-------CAG----TAGTAGCAGCCACAAATCGACGGTGACGCCAGGCTTTGGCCGG---------TG
TGCATGCACCGGCCACAA------GCCACAGCAGCCGGCCGGCCGT------------CCGTCCGTTGGTTACCTGTTCC
TTTCGCGGGCATATCACGTACGACGTACGA--------------------------------------------------
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>chr2D_756
AAG-----------------------------------------------------------------------------
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-------CCAAACGGGCACCAACACCAAGCCTGTCGCTGCCGCACGCGCAGGCGCAGCGGACAGCGGTCCGCGCACGGTC
--CTGCCCCTGCGCCCTCGTCCCCTCCGCTATAT----------------A---------------TGCCATC-------
-----CCCGGCACCGGCCACTCAAAATCCCCAGACTTTCCAAGCCCAAAATCAAAATCCCACCTC----TCTCCGATCCC
CCCTTCTTCCTCCTCTCGTTTCGTTTCTTGCGGCCGAGGGGATCGTCGATCGATC----CATGGCAACAATGGGCGTGGG
CGGAGCGGTGAAGATGATCATCGGGGCGAAGGAGGAGCGGGTGGTGGCCACGGGCAAGGCGCCCGGCGCTTGCCCGTCCT
GCGGCGGCCCCGTGGTGGCGACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAGCAAGCGC
AAGTACTACTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCTAGTAGCTCATCAAGCCTCTCCTCATGCCG--
ATCCATCCATCCATCCATCGATCAACTAGCGTGCGGAGTTCTTTGGTTC-------------------------------
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---TT---AGTTGGCCGTGGTTACGGCCCTAGAGTAGCTTGCTAGCCTGGCTAATGTAATGTAATGGTGATTCTGAGTTA
ATTCTTCT--------------AT--------------------------------------------------------
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---ATC-TAGCTTATTTGGTGGGCGTGCATCCCGTGAAGGGCTGCAAAACTGGCACTCTGCT------------------
-----GTGTCTTGCAGCAACCTC-----------TGGCGGTGCACCTCCGCGTTAATGCGCAGGCCAGTAATG-------
-----G-------A---AA-------------------------------------------------------------
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>chr2A_785
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---------------------------------TCGCTGCCGCGCGCGCAGGCGCAACGG-------TCCTGCCACTGCT
TGCCG--CCTGCGCCCTCGTCCCGTCCGCTATAT----------------ATACGGGCCTGC-------CATC-------
-----CCCGTCACCGGCCACA-ACAATCCCCAGACTTTTCAAATCC------AAACCACCAACTCC-----------CCC
CTCTTCTTCCTCCTCT-----CGT-----GCGATCGAGGGGATCGTCG----ATC----GATGGCGACAATGGGTGTGGG
CGGAGCGGTGAAGATGATCGTCGGGGCGAAGGTGGAGCGGGTGGTGGGCACGGGCAAGGCGCCCGGCGCTTGCCCGTCCT
GCGGCGGTCCCGTGGTGGCGACGGACGTGGAGAGCGAGCGGCGCATCCTGTGCCTCCCGCTGTGCCTCAAGAACAAGCGC
AAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCTAGCCGAATC-CAAGCCTATACTCC---T---
ACCGGTCCATCCATCCATCGATCAACTAGCGTGCGGAGGCGAACAATC--------------------------------
------------------------------------------------------------------CCCGAGTTCTTTGG
TTCTTGTT----------------GGCCCTAGAGTAGCTTGCTAGCCTGGCTAATGTAATTC------------------
ATTCATCT--------------AATT----------------TC------------------------------------
------------------------------------------------------CAGACTTTCCAGTAGCCATATCTAGC
TAA--------------------------TCTGGTGAGGCGCTGCAAAACTGGCACTCTGCT------------------
-----GTGTCTTGCAGCAACCTCTCTGTCAATGGT---------------------------------------------
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>chr2A_821
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----------------------------------------------------------------------------GGTC
--CTG--CCTGCGCCCTCGTCCCCTCCGCTATAT----------------AATGGGGCCTGCCA--TGCCATC-------
-----GCCGGCACCGGCCAGTCAAAATCCCCAGACTTTCCAAAGCC------AAAATCCCACCTCCC-TCCTCCGATCCC
CCCTTCTTCCTCCTCT-----CGTTTCTTGCGGCCGAGGGGATCGTGGATCTATC----GATGGCAGCAATGGGTGTGGG
CGGAGCTGTGAAGATGATCTGCGGGACGAAGGTGGAGCGGGTGGTGGGCACGGGTAAGGCGCCCGGCGCGTGCCCGTCCT
GCGGCGGCCCCGTGGTGGCCACGGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAGCAAGCGC
AAGTACTCCTGCACCCGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCTAGTAGCTCCTCAAGCTTCTTCCGGTACTG--
ATCTATTCATCCGTCGATCGGTCGGCTAGCGACGTGCG------------------------------------------
-----------------------------------------------AGGCCAATCAGTTAATCGTCCCGGGTTCTTTTG
TTGTTCTTC-TTGGCCGTGGTTACGGCCCTAGAGCAGCTTGCTAGCCTGGCTAATGTAATGTAATGGTGATTCTGTGTTA
GTTCCAGTTCTTCAGTACACAAATGAT-----------------------------------------------------
--------------------------------------------------------------------------------
--AATCGTAGCTAATTTGGTGGGCGCGCATCACGTGGAGCGCTGGAAAACTGGCACTCTGCT------------------
-----GTACTCCT------------------------------------GCGTTAATGCACCGGCCAGTATTG-------
-----G-------T---AATGCGCTT---------------CTTTCATTAAGATGGTA--ATTAACGTACTAATGGGACC
ATCATGGACAA-------------GCAGATACGCAAAAGTACATTGGCCCGTCTCG----ATCGATCGATCCCCCGAGCC
CCGAGCCTCGATCACCATAGTGATGCACAGTAGTAGCGGCTACACAATCACTG--------TCAC----CGCATGTATTG
TGCCGATCACTA-------CAG----TAGTAGCAGCCACAAATCGACGGTGACGCCAGGCTTTGGCCGG---------TC
TGCATGCTC---CCACAA------GCCACAGCAGCTGGCCGGCCGT------------CCGTCCGTTGGTTACCTGTTCC
TTTCGCGGGCATATCACGTACGAGGTACGAGTAA----------------------------------------------
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>chr2A_823
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------------------------------------------------------------------------------TC
--CCG--CCTGCGTCCTCGTCCCCTCCGCTATAT----------------AC-GGGGCCTGCCACATGCCATC-------
-----CCCGGCGCCGGCCACTCAAAATCCACAGACTTTCCAAGGCA------AAAAATCCCATTTCCCTACTCCGATCAC
CC--TCTTCTTTCTTT-----CCT-----GCGACCGAGGGGATCGTCG----ATC----GATGGCAACAATGGGCGTGGG
CGGAGCGGTGAAGATGATCGTCGGGGCGAAGGTGGAGCGGGTGCTGGCCACGTCCAAGGCGCCCGGCGCTTGCCCGTCCT
GTGGCGGCCCCGTGGTGGCGACCGACGTGGAGAGCGAGCGGCGCATCCTGTGCCTCCCGCTGTGCCTCAAGAACAAGCGC
AAGTACTCCTGCACCAGGTGTTTCCGCCGCCTCGTCACCATCTACAGCTAGA------TCAAGCTTCTTCCAGCAGT---
ATCGATCTGTCCATCCTTCGAA----TAGCCGCG---T------------------------------------------
--------------------------------------------AGGGAGCCAATCAGTTAATCCGCTCGAGTTCTTTGG
TTCTTC----TTGGCCGTGGTTACGGCCCTAGAGTAGCTTGCTGGCCTGGCCAATGTAAT-----GGGGATTCTGTGTTA
ATTCTTCT--------------AGTACTCCCTCCGTTCAGAATTACTTGTCTCGGAAATGGATGTATCTAGAACTAAAAT
ACGTCTAGATACATCCATTTTTGCGACAAGTAATTCCGAACGGAGGGAGTAGTTCTTAGCTGGTGTATTGATCGTTC---
-------------------------TGCGTCATGTGAGGAGCGCTGCGATTGGCACTCTGCTGCAGTAGTAGCAGTTCTT
AGCTGGTGTATTGCAGTAAGCTCCCTATCAATGGTGGCA----------GCCTTAATGCATAGGGCAGTATTG-------
-----G-------A---AATTTGGAATGCGCTTGCCGTCCGCCTTCATTAAGATGGCA--ATTAACGTACTGATGGGACC
ATTTCGCATGGATCGTACACGTATGCAGATACGCAAAAGTACATTGATCCGTCCCG----ATCGAGC-----------CT
--------------CTATAGTGGTGCTCATT----GC---CGCCGAATCTCTGTCACTGGCTCAC----TGCATGTATTG
TGCCGATCACTGGCCACTGCAG----TAGCAGCAGCCACCGATAAT-GGTGACGCCTGGCTTTGGCCGGCCGTAGCATTC
TACATGCTC---CCACAA------GCCACAGCAGCCGGCCGGCCGTTCGTCAGTCGGTCCGTCCGTTGGTTACCTGTTCC
TTTCGGCGGCATATCACGTAC-----------------------------------------------------------
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>chr2D_823
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------------------------------------------------------------------------------TC
--CCG--CCTGTGCCCTCGCCCCCTCCGCTATAT----------------AT-GGGGC----------------TGCCAT
GCCATCCCGGTACCGGCCACA-AAAATCCCCAGACTTTTGAAGGCC------AAACCACCAACTCCCCCCTT--------
---TTCTTCCTCCTCT-----CGT-----GCGACCGAGGGGATCGTCG----ATCGATCGATGGCGACAATGGGCGTGGG
CGGAGCGGTGAAGATGATCATCGGGGCGAAGGAGGAGCGGGTGGTGGGCACGGGCAAGGCGCCCGGCGCGTGCCCGTCCT
GCGGCGGCCCGGTGGTGGCGACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAGCAAGCGC
AAGTACTCCTGCACCAGGTGCTTCCGCCGACTCGTCACCGTCTACGGCTAGAAGAATC-CAAGCCTCCGCT---------
-CCTATCAATCGATCCATCCATCAACTAGCGTGCGCAGTAGAACAATC--------------------------------
------------------------------------------------------------------CCCGAGTTCTTTGG
TTCTTGTTAGTTGGCCGTGGTTACGGTCCTAGAGTAGCTTGCTAGCCTGGCTAATGTAAT--------------------
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>chr2D_871
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--------------------------------------------------A---------------TGCCTTC-------
-----CCCGGCACCGGCCACA-AAAATCCCCAGACTTTTCAAAGCC------AAACCACCAACTCA-----------CCC
CTCTTCTTCCTCCTCT-----CGT-----GCGACCGAGGGGATCGTCG----ATC----GATGGCAACAATGGGCGTGGG
CGGAGCGGTGAAGATGATCGTCGGAGCGAAGGAGGAGCGGGTGGTGGCCACGGGCAAGGCGCCCGGCGCGTGCCCGTCCT
GCGGCAGCCCCGTGGTGGCGACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAACAAGCGC
AAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGCCTACAGCTAGCCGATTC-CAAGCGTCTACT---------
-CCTACCCATCAATCCATCGATCAACTAGCGTGCGGAGTCGAACAATC--------------------------------
------------------------------------------------------------------CCCGAGTTATTTGG
TTCTT---TGTTGGCCGTGGTTACGGTCCTAGAGTAGCTTGCTAGCCTGGCTAATGTAATTC------------------
ATTGATCTAATTTCCAGTAGCCAT--------------------------------------------------------
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---ATC-TAGCTAATCTGGTGGGCGTGCATCACGTCGATCGCTGCAAAACTGGCACTCTGCT------------------
-----GTGTCTTGCAGCAACCTCCCTGTCAATGGT---------------------------------------------
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>chr2B_880
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------CCGCCACCGGCCACA-AAAATCCCCAGACTTTTCAAAAGCCAAGATCG--TCCCACCTC----CCTCCAATCCC
CA--TCTCCTTCCTCT-----GGC-----GCGACCGAGGGTATCGTCC----ATC----GATGGCAGCAATGGGCGTGGG
CGGAGCGGTGAAGATGATCATCGGGGCGAAGGAGGAGCGGGTGGTGGCCACGGGCAAGGCGCCCGGCGCGTGCCCGTCCT
GCGGCGGCCCCGTGGTGGCCACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAGCAAGCGC
AAGTACTCCTGCACCCGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCTAGTCGCTCCTCAAGCCTATCCTCC---T---
GCCGATCCATCCATCCATCGATCAACTAGCGTGCGGAGTTCTTTGGTTCTTACTCCCTCCGTTCCAAAATAGATGACCCA
ACTTTGTACTAAAGTTAGTACAAAGTTGAGTCATCTATTTTGGAACGGAGGGAGTAC-----------------------
TTCTT---AGTTGGCCGTGGTTACGGCCCTAGAGTAGCTTGCTAGCCTGGCTAATGTAATGTAATGGTGATTCTGAGTTA
ATTCTTCT--------------AT--------------------------------------------------------
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---ATC-TAGCTTATTTGGTGGGCGTGCATCACGTGAAGGGCTGCAAAACTGGCACTCTGCT------------------
-----GTGTCTTGCAGCAACCTCCCTGTCAATGGT---------------------------------------------
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>SNPs
SS---------------S-----------------------------------S----------------------S---
-------------------------S--S-----------S-S-------------------------------------
--------S-----------------------SS-SSS-S-S----------------S---------------------
--SSS-----------------------------------S-------------------SS----------S-------
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-----------------------------------------------------------------S--------------
------------------S--------------S-------------------------S--------------------
------------S-------------------------------SS----------------------------------
S----------------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS---------S---------SS---S-SS--SSSSSSSSSSSSSSSSSSS-----------------------
----------------------------------S------------------------------------S---S----
------------S-------------------------------------S-----------------------------
---------------------------S-SSSSSSSSSSSSSSSSSSSSS------------------------------
-----------------------------------------S--------------------------------------
-------------S------S-----------------------------------------------------------
------------------S-------------------------------------------------------------
----------------------------------------------------S---------------------------
--------S----------------------------------------------------S----------S-------
------------S-------------------------------------------------------------------
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------------------------------S-------------------------------------------------
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----------S-S---------------------------------------------SS--------------------
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-----------------------------------------------------------------SSSS-----------
--------------------S-SSSS-----------------------S--------S---------------------
------------------SSSSSS---------S----------------------------------------------
---------------S------S-------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2848
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----------------------------CCGCTATATAACGGGGCCTG--------------------------------
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>reverse_4588
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---------------------------GTGGAAGCCATGAACGGGTA---------------------------------
-----------------------------------------------
