>input_sequence_86319
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------------------------------------------------------ATGGGGAGAGCCATGGCCGTCGACGC
TGCTGCTGCCGTTGACGACGGGAAGTCGTCGTGGCCGGAGGTTGTGGGCTGGGACGGCTTTACGGCGATGATCAAGATCA
AGGCTGACAGGCAGGACGTCACCATAGAGTTCCACGCCGTCGGCGACAACGTGGCGCCGGACGAGGACGACCACCGCGTC
CGCATCTTCCTTGAGCACCACGTAGTCGCCCAGACTCCGGTCGTTGGCTAG-----------------------------
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>chr6D_1_TraesCS6D01G073400
TTTTATTTCGTTAATAAGATGGCCGTATGCATCATTCTGATGCAGAGGCCGGGGAGATCCCCTTTTCGAAAAAAAAAATG
TAGATGTCAT-CCGCAGTTTGGCAGGAGATCATACGACAGGTACCAACATCAATCGAGCAGTGACTCTTGGGCCAAAGAA
ATCAACCAAGGGGAACTAACATTCCAGAAGATAAACAGCAGTGTCGACATAAACATTAACTTGAAATTTTCAAACTGAAG
ATAAAAAAAATTATAAATACTTTAGCACGGAC------------------------------------------------
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--------------GATTTCTGTTTTTGGTATTCCGAAAGATCTATTATGGAGACATCAAGGTGTATAAATCAAAGTGAT
CAAACGGTCGAATGAACTAGTGCATCAATGATCTTGAAACATGCCTTTGTCTCGCT---TTATGTATGAAAC--------
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---------------GAACCACCACGTCCAAATATCAAGTCTAAGTGCCGGAAAGAAAGCACTGTGCATATATGGCACCA
GACTAAAAGAGTCCACATCA------------------------------------------------------------
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------------------------------------------AAGTTTTAATTATATCCATCAAATCCGATATGTTATAT
CCTGCCCTGGCACATAGACAGAGATACGTAGTGAACGGATAAGCGTTGAAGCGAAACGCACACTCATGACGAACGTGTTG
TCAGTT----------------------------TTTTCAGTAAACAACACAGGCCCGATACTCATGCATCGGGAAACAA
GTCGGGAGACTCAGTTTACAATGCGAATGTA---TAAGCTGTGACGGTGCAGGCGATGCCCCTTGTACTTAGTTACTTCC
ACAAAAGAATAACGTATGTACACCTACGCACGTGTATATATACGTACACTAGGTACCTGTCTGCACCATAACCACAAAGC
GTCGTCGACCAATAGATCACTCTCTA-------CCTTTCTTCTTCTCATTCGCTGGTACGAGCCGTGCCCGTACTATTTT
CCGCGGCCGTATCCCTCTCGTTTAAAAATGT----------------------A---CATATGATCCGCTGTTAATTAAA
CGTGCGTGCATATACTTGTTTGTTGGTATTTTGCAGCTAGTGCGCGTACGATCGATGGGGAGAGCCATGGCCGTCGACGC
TGCTGCTGCCGTTGACGACGGGAAGTCGTCGTGGCCGGAGGTTGTGGGCTGGGACGGCTTTACGGCGATGATCAAGATCA
AGGCTGACAGGCAGGACGTCACCATAGAGTTCCACGCCGTCGGCGACAACGTGGCGCCGGACGAGGACGACCACCGCGTC
CGCATCTTCCTTGAGCACCACGTAGTCGCCCAGACTCCGGTCGTTGGCTAGCCGGCCTGTCCTGCTTCCGTTTGTGCTTG
TGAGCGTTGTGACTTGTGTGGGGTGTACGTAGCTACCAGCTACGCCCTTGCGCGTGTTATGTG-----------TGCTTG
TGTGTGGTGTGTGCGTAGCTACCAGCTACGCCATATAGAAACGCTACTTGCACTCTACATAATCCACATATATAGTGTTT
ATGTGAAATAAGAGCTGCTAGC-TTTTATGGTACCCATAAATTAATCAGATTTGCTAATTCTGTCAACTGAGATGTTAAA
CCACAGTCGACTCTGTAGCCAAGCGATCTTGACGCCGTGATT--------------------------------------
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-------------------------------------------------------------------------------C
GTTATGTCTACACACGTAAGCAGACACGTTAAGTATATTCTTTGTTATATTTTAAAAATAACTAAATA-AAATATTCCAT
ACATTACTTCACTTAAATCTCTGAAATATTCACGGTGCAAAAAAAAG-TTCATGGAATGTAAAATTTTGTTCGCATAATT
TGTTAAGAACTGCTCATATTACTAAGAAATTATTCATCACAGTTGTCAAATTGTTCATGCCTTTAAAGTTAT----ATGA
CACTGTAAAAGGAGGCCAAACAATGTA---AAAAATGCACACAATTCTTTCAAATATTTTATACTAATCTTCCTGAAATT
TAAAAAATGTTCACTCATTTCTAAATTTGGCCGTGACATTTTCTAAAAGTGTTCATGAAAATATAAAGA-TTTTTTGCTT
AATTATTAGAAAATGTTCATACCATTCAAA-ATTTCAAGATAGTTTTACAAATTACAAACATTTAAAAATATGTTTTACG
ACATTGAAACAATGTTCATGGAATCTAATAATTTTTTCATTCTATTTTAGAAAATGTTCAACGTTTTAC-TAGAAATATT
CAGAGTTTATTCAAAAGGTATTCAATATGAAATTTGCAATTGTTCAACATCTATTCGGTTAAAAATGTTCAACGTGCATC
TTCAAAATGTTCAACCTGTATGTGAAAATGCACAACGAGTATAAAATAAATCAACATCTATTTTAATAATGA
>chr6B_78
-----------------------------------------------------------------------------ATG
TAGATGTCATGCCGCAGTTTAGCAGGAGATCATATGACAGGTACCAACATCAATCGAGCAGTGACTCTTGGGCCAAAGAA
ATCGACCAAGGGGAACTAACATTCCAGAAGATAAACAGCAGTGTCGACATAAACATTAACTTCAAATTTTCAAACTGAAG
ATAA-AAAAATTATAAATATTTTAGCACGGAT------------------------------------------------
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--------------GATTTCTATTTCTGGTATTCCGAAAGATATATTATGGAGAGATCAAGGTATGTAAATCAAAGTGAT
CAAACGGTCGAATGGACTAGTGCATCAATGATCTCGAAACATGCCTTTGTCTCGCT---TTATGTATAAAGCGAACCACC
CTCTGGCGGAGCTATGTGTATGGCTGGGGGGCTGTGGCCCCCCCAAGCCTGGGATCTTCTGTGAAGATTTTTTTTTTGTG
ATGACATAGATTAGAAAAAATAGGAAGTTTTGCCTCTTCATAAACCCATATTTTGCCATTTACCCCCCAATGATCTTGTG
CTAGCTCCGCCACTGGAACCACCACGTCCACATATCAAGTCCGAGTGCCGGAAAGAAAGCACCGTGCATATATAGCACCG
GACTAAAAGATTCCACATCAAAGTTTTACGGAAATGTTAACGCCTACACGTGTGGGCGTTTGCACATCGCCCGCACGCCT
TCATCATCACTCATTTTGTCACGTATGAATAGATGACATCAGCAGATTTTTTTTTGGCTTTCGGCTTAAAAATATTGTAT
CTCCTAAATAAAAAAGCGAACTAAAAATCCGTTTTCACCATTAAATCCGTCTTGATGAGATCTTCAAAACTAGACCCAAT
GTTGATATGTTTCGACGAATTTTTTTTTACCAGAAGTTGCCATGATGTTTACACTGCAGTTGCCATAGGGCTTAAACTAA
AGTTGCCATGTGGCAATTTTTGTTTGTAGATCATGGCAATTTTAGTATTTTGATGATGGCAACTCCAGTACTTTGACCAT
GAAAATTATTTTTTGTATGAACCATGGCAATTTTACGTGCATGTATCATGGCAATTTTAGTTTATGGTTCATGGCAAGTC
TAGTTTCTTAATTCCCCGTTTTATAAACGTCAAAATTTACTTTTAAATGTAGAAGAAAATAGCTGAAACATATCATGGCA
ACTTCAGTGTAAACATCATGGCAATTCATATGCAATAGACATGGCAAATTTTAATCCAATTTTTTTTTCATCAAAACATA
TTTCGAAGATCTCATCGCGAGGGATTTAATGATGAAAACGGATTTTCAATCGGATTTTTTGTTTAAGAGATAAAACATTT
TAAAAACTGAAAATCCAAAAAGATTCCTGCATGCATGCATGCGATGACGTGGCAATCTGTTTACATTAAAAACGTGTGGT
GCGTCTTCCTTCCTGCCACACGTGTGGCAGTTAGCGCGACCCAAGTTTTAATTATATCCATCAATATAT-TATGTTATAT
CCTGCCCTGGCACATAGACAGAGATACATAATGAACGGATAAGTGTTGAAAC-AAACGCACACTCATGACGAACGTGTTG
TCAGTT----------------------------GTTTCAGTAAACGACACAGGCCCGATACGCATGCATCGGGAAACAA
GCCAGGAGACTTAGTTTACAATGCGAATGTACTATGTGCTATGGCGGTGTAGGCGATGGCCCTTGTACTTAGTTACTTCC
ACAAAGGAATAACGTATGTACACCTACGCACGTGTATATATACGTACTTTAGGTACCTGTCTGCACCATAACCACAG-GC
GTCGTCGATCAACAGATCACTCTCTA-------CATTTCTTCTTCTCATTCGCTGGTACGAGACGTGCCCATACTATTTT
CCGCATCCGTATCCCTCTCGTATAAAAATGTACTTCTACCTCTAGTCTAGTATATTACATATGATCCGCTGTTAATTAAA
CGTGCGTACATATACTTGTTGGTTGGTATTTTGCAGCTAGTGCACGTACGATCGATGGGGAGAGCCATGGCCGTCGGCGG
TGCTGGTGCGGTTGACGACGGGAAGTCGTCGTGGCCGGAGGTTGTGGGCTGGGACGGCTTTACGGCGATGATCAAGATCA
AGGCTGACAGGCAGGATGTCACCATAGAGTTCCACACCGTCGGCGACAACGTGGCGCCGGACGAGGACGACCACCGCGTC
CGCATCTTCCTTGAGCACCACGTAGTCGCCCAGACTCCGGTCGTTGGCTAGCCGGCCTGTCCTGCTTCCGTTTGTGCCTG
TGAGTGTTGTGACTTGTGTGT----------------------GCTCTTGCGCGTGCTTGCTTGTGTGTCAGGCTGCT--
TGTGTGTGGTGTGTCTAGCTACCAGCTACGCCATATAGAAACGCTACTTGCACTCTACATGCTCCATATATATAGTGTTT
GTGTTAAATAAGAGCTGCTAGCTTTTTATGGTACCCATAAATTAATCAGATTTGCTAATTCTGTCTACTGAGATGTTAAA
TCACAGTTGACTATGTAACCAAGCGATCTTG-------------------------------------------------
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>chr6A_78
-----------------------------------------------------------------------------ATG
TAGATGTCATGCCGCAGTTTGGCAGGAGATCATACGACAGGTACCAACATCAATCGAGCAGTGACTCTTGGGCCAAAGAA
ATCAACCAAGGGGGACAAACATTCCAGAAGAAAAATAGCAGTGTCGACATAAACATTAACTTGAAATTTTCAAACTGGAG
ATAA-AAAATTTATAAATATTTTAGCACTGACGATTTCTATTTCTGGTATTCCGAAGGATCTATTATGGAGACGTTAAGG
TATATAAATCAAAGTGATCAAATGGTCGAATGAATTTTTTTGCTATTTTTTTATTTTACTGTTCACTTCAGAGTAGATTA
ATTTTTTATTTTTGCTGCGAGCTCCTCGAACTTCCAAACATGATGAAAATTTGCACGCACATGGCACACCTGAGTATCTT
CGATGTCATAACATTGCAGATTTTTTTTAATTCTTTTTGCTCTATTTTTCGAATTTACTGTTCATCTAGTGTACTGTTCA
CACGTGGTCAAAACCGGGTTGACTCAGTCGCAGGGACGAAAAATAACCGGTTTCGAGAGTTCGGGGTGCACTCTGTCCGG
TTTTAGAGTTGAGGGACGAAAAGTAAACTCAGCGAAGAGTTGAGGGACGAAAAGTATACTTTTCTCAAAAAATTATAAAT
ATTTTAGCACTGACGATTTCTATTTCTGGTATTCCGAAGGATCTATTATGGAGACGTTAAGGTATATAAATCAAAGTGAT
CAAATGGTCGAATGAACTAGTGCATCAATGATCTGCAAACATGCCTTTGTCTTGCTTTATTATGTATAAAACGAACCACG
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---------------------CCTCGTCCAAATATCAAGTCCGAGTGCTGGAAAGAAAGTACTGTGCATATATGGCACCG
GACTAAAAGATTCCACATCA------------------------------------------------------------
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------------------------------------------AAGTTTTAATTATATCCATCAATATAT-TG-----TAT
CCTGCTCTGGCACATAGATAGAGATACATGGTGAACGGATAAGTGTCGAAGCGAAACGCACACTCATGACGAACGTGTTG
TCAGTTCCGTTTAAAAAAAAACGTGTTGTCAGTTGTTTCAGTAAACAACACAGGCCCGGTACGCATGCATCGGGAAACAA
GTCAGGAGACTCAGTTTACAATGCGAATGTA---TGAGCTATGGCGGTACAGGCGATGCCCCTTGTGCTTAGTTACTTCC
ACAAAAGAATAACGTATGTACACCTAAGCACGTGTATATATACGTACTTTAGGTACCTGTCTGCACCATAACCACAA-GC
GTCGTCGATCAACAGATCACTCTCTAGTGTCTACCTTTCTTCTTCTCATTTGCTGGTACGAGACGTGCCCATACTATTTT
CCGCGGCCGTATCCCTCTACTTTAAAAATGTACTTCTACCTCTAGTATATTATA---CATATGATCCTCTGTTAATTAAA
CGTGCGTACATATACTTGTTGGTTGGTATTTTGCAGCTAGTGCGCGTACGATCGATGGGGAGAGCCATGGCCGTCGGCGG
TGCTGGTGCGGTTGACGACGGGAAGTCGTCCTGGCCGGAGGTTGTGGGCTGGGACGGTTTTACGGCGATGATCAAGATCA
AGGCTGACAGGCAGGACGTCACCATAGAGTTCCACGCCGTCGGCGACAACGTGTCCCCGGACGAGGACGACCACCGCGTC
CGCGTCTTCCTCGACCAGCAGATAGTCGCCCAGACTCCGGTCGTTGGCTAGCCGGCCTGTCCTGCTTCCGTTTGTGCTTG
TGAGTGTTGTGACTTGTGTGTTGTGTGCGTAGCTACCAGCTACGCCCTTGCGCATGTTATGTG-----------TGCC--
TGTGTGGTGTGTGTGTAGCTACCAGCTACGCCCTATAAAAACGCTACTTGCACTCTACATGATCCAGGTGTATAGTGTTT
ATTGGAAATAAGAGCTGCTAGCTTTTTATGGTACCCATAAATTAATCAGATTTGCTAATTCTGTCAACTGAGATGTTAAA
TCACAGTCGACTCTGTAGCCAAGCAATATTGGTCGCGCGATTGGTAAAGACCTCCTGAAGTGGGCCTACCAATCAGGGTT
CAAATCCTGGTTCTCACAAAAAAAAGCCTCTCGCTGTATCTAATTGTGTTGTGCAAGCCAGCGAGTTCGCTGTGAATACT
TGAACTGCGCAAGCCAGCGTTCGGGGCCTTTATCGACCTTACAATATAATGCCTTCGGGATTTCTCTCCCCTTAGGTCGA
GTTTTTTTTTTCTCGATTGTCGTCTTTTTGTTTCATCCGGGCAGGGTTCACACAAAGATGGGACAGTCTTGGCCACGCAA
CAAGCGAGATCGAAGCTCATGTCGCCTCAAGTGTCTTCATTAATGGGCCAGACCCAGTGTGCGTGCATCTGCGACAGACC
GCTATGTCTACACACGCAAGCAGACATGTTAAGTACCCCTTTTGTTACATTTTAAAAATAACTAAATATAAATATTTCAT
ACATTACTTGACTTAAATTTCTGAAATATTCACGGTGCAAAATAAATATTCATGGAATGTAAAATTTTGTTCGCATAATT
TGGTAAAAACTGCTCATACTACTCAGAAATTGTTCATCACATTTGTCAAATTGTTCATGCGCTTAAAATTATTGTTATGA
CATTGTAAAAGAAGGTCATACAATGTAAAGAAAAATGCACACAATTCTTTCAAATATTTCATACTGTTATTCCTGACATT
TAAAAAATG-TCACTCTTTTCTAAATTTGGCCATGACATTTTCTAAAAGTGTTCATGAAAATATGAAGAATTATTTTCTT
AATTATTAGAAAATATTCATACCATTCAAAAATTTCAAGATAGTTTTAAAAACTTCAAACATTTAAAAATA-GTTTTATG
GCATTGAAACAATGCTCATGAAATCTAATAATTTTTTCATTATATTTTAGAAAAAAATTCAATATTTGATTAGAAATATT
CAGAGTTTATTTAAAAGGTATTCAATACGAAATTTGCAATTTTTCAACATGTATTCGGTTAAAAATGTTCAATGTCCATC
TTAAAAATGTTCGACCTGTGTGTGAAGATGCACAGCGTGTATGAAATAAGTCAACATCTATTTTAATAAT--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
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----S--------------S------------------------------------------------------------
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---------------------S---S-------------------------------------S----------------
----------------------------------S--------------------------------S------------
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-----------------------------------------SS------------------------------------S
----------S---------------------------------------------------------------------
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----------------------------------------------------------------SSSSSS----------
---------------------------S---------------S------------------------------------
----------------------------------S---------------------------S-----------------
---S-------------------------------S----S--S------------------------------------
-----------------------------------------------SS----------------------------S--
--------S---S-------------------------------------------------S-------S---------
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-------S------------S-------------------------------------------------------S--S
-----S---S----------------------------------------------------------------------
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----S---------------SS----S---------------------------------------------------SS
-------------S----------------------------------------------S-----S-------------
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S------------------------------SSSS--S------------------------------------------
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-S--------------S---------S--------SSSSS-------S----------------------------S---
---------S--------S-----------------------S---S---------------------------------
--S---S-----------S----S-------S---------S------------------SS-----S------------
--S--------S---S--S----------------------------------------S-----SS-S-------S---
---------S------S---------------S-------------------------------S-------S---S---
--------------S---------------------------------S---S-S----------------S------S-
S-------------S-----S--------------------S------------SSS-SS-SSS---SS-----------
-----------S---------------S-------------S--------S---------------------S--S----
--S---------S------S------S-------S--S----S------S--------------------SS
>forward_2383
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-------------------------------------------TCTCATTCGCTGGTACGAGC-----------------
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>reverse_4100
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-------------------ATGTGAAAATGCACAACGAGT--------------------------------
