>input_sequence_86306
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GGGGAGGAGTGTGCCTGCGGGTGCCGGCGCCGGCAGCATGAA-GGCGTCGTGGCCGGAGGTAGTGGGCTGGTCGGCGCAC
GACGCAGCGCTCCAGATCAGCAAGGACAGGCCTGACGTCTCCATCTCCTTCTACATA-GGCACGGGCCCTTGGCCGCCGG
GCCCGCACCCCTGGCGTGTCGTCGTGGTGTCAGACGCGGCGACCGGCGTGGTCGTCCAGACGCCCGTTGTGGGTTAG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr5B_1_TraesCS5B01G419600
GTATAGTATGTAGCAGCATAAAATATGTTTGGAATGAAAAAAAATGGAAAACACAAAATTAAAAGGAAAAATATACCCTT
AAAAACCCCAAACCTTTTAGTCCCGGTTGGTGTAACCAACCGGGACTAAAGCCCCCCAGCCCCCTGGCGCGGGCTCGTGC
CACGTTGTTGGCTTTGATCCCGGGTTGTGACGAACCGACACTAAAAGGTGGTGGGGGGCTTTAGTCCTTACCTTTTAGTG
CCAGTTGGTGAACCAGGACTAAAGGTCCTTACGAACTGGGACTAAAGCCCGATTATGCACTAGTGGTGGCACCTAAAGAC
GGCGAGAGCATCGGCTGCGCGCAGTGGCAGATCTACATTTTTTTATTATTTTTTTATTTTAACTTAATTAGACATGCGGG
ACGTGACTATCATTGGCTGTTTAATTAAGTTACTGTTATATGTATGTTTTAACCTACTTTTGCAATGCCTTATTTTGGGT
TTTCTAAGTGCAATACGGACACAAAAGTTTGGGATGCGGCCGCGTGTTGAATGCACCGACCGGTGTATGGCCAAAACCGG
ACACATGCGTCCATTTTGCCAATCTAATTGGATAGAATTCTGATAAAACAGACGTCCGTTTGAGATCGACAAGCTCAATG
TAGAAGAGAGACCAGTCT---GAACACGTTCTTGGCTATCCTCGATGTTTCACAGTCGACGGGCACACTAGTGTGCAC-G
AGTCATCAAGTTTCTTCCTGCTTTTCCTAGAAAG----GAGAGTGAGAAAAGCTG-CGTGCTCTCCTCTCCTAGT---AA
CCGA-CGCTGCCCATCAGCCAACAAAGGACGGTGGTGTC------CGTGATGCAACCCATTATCATTTTA-ATTTAT---
--TGATGACATGATGCTACCCGTCATCTTACCACCACTTC-CGTGGAAGAAATTTGCGT------CTATAAAGTACCATC
AAATGTGGCTTACTAG---GT---ACTTGCATATTCATCAGCCACAAGCCGTGGAAAGTTTCAGTACCACCGGGCAAAAT
GGGGAGGAGTGTGCCTGCGGGTGCCGGCGCCGGCAGCATGAA-GGCGTCGTGGCCGGAGGTAGTGGGCTGGTCGGCGCAC
GACGCAGCGCTCCAGATCAGCAAGGACAGGCCTGACGTCTCCATCTCCTTCTACATA-GGCACGGGCCCTTGGCCGCCGG
GCCCGCACCCCTGGCGTGTCGTCGTGGTGTCAGACGCGGCGACCGGCGTGGTCGTCCAGACGCCCGTTGTGGGTTAGGCC
GCATGCACCCCTTG-------TGCCATCGCATGGATACGTAC-------AGTAGTATCGTATTTGCGTTGCTGCAGTTGC
ACAGCACATGAATAAAATCCAACATTTGAAAGCATGTTCCTATTCGAGGCAG-------TGGGGTGCATATGAATAAAAT
TCAACATTTGAAAGCAGGTTTCATTACGTGGATGGTAGAGTACTATGATTTTCATATTTGTTTTCTC--------CTCAC
TGCATTATCATACATGTAGCA----TAGGTTCAGTTGTTACATCTCTAACATCGATCAGGTTCAGGCCCATTTGTTGAAG
AGAATTTAGATTGATTTCTTTTTCTAGACTAATTTTAGAATGATCGAGCATGTATGGTTTGTGGTTTGGCAGTCTTTCC-
AACAAACTAACCTACTTACGAATCAAAGA-----------CTGTTGAAAGGGGCCGCCATGTGAAAGAAACATAAT----
---------------------------------AGTCCAAGGAGGTCGTATGCAAC------------------------
------GCC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTCCAGAGCAAAGACGC------------------------
-------AACTTTTTGGGTGCAGCTAGCCTCCCATCTCTG-----------TGTGTATGCTTTTGAACCGATCGAGTAGC
CTC-------------------------------------------------------------------GCCTGGACGG
ACCTCGGCCAGGCAAGCCATTCATGCCAGTTTTACTGTGAATGTTAACGATCTTTTCACGATGCCACTATTACCGAAGTC
GTGCTTGCTTGCATCACATTTGCATCAACAGGTGATTTTGTGTTCACAGGCTTGTACCAAACAAACGAGGCTAAAATGTG
CTGATTTGGGTTAAGGTCCTAAACATTGGTAATACAAGGTCATGAAATGGATTAAGGTCCTAAAC------------ATC
GAATTCTAGACAGGTAACTGCAAAGATAATACTACT-T-----TATACTACTGGTGGTCAGCGACCTGAGGTAATCAGCT
TGAATGTGGTGAAGTTACTTTCAAGTCTTTCCTTGCCATATTGATGGCTTGAAGTACAATCCAATGATGAACCATGATAA
GTGACAAGTAGAAGAAATCAGTTTATTATTTTCCTAATTTTATTTAGTTGAGCCTACCATCTTCGT
>chr5B_640
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TAGAAGAGACACTAGTCT---GAACACGTGCTTGGCTATCCTCGATGT--------------GCTCGGTAGTCTGCAC-G
AGTCATCAAGTTTCTTCCTGCTTTTCCTAGAAAGA--GGAGAATGAGAAGGGCTG-CATGCTCTCCTCTCCTAGT---AA
CCGA-CGCTGGCCATGAGCCAACAAAGGACGGCGGTGTC------CGTGATGCAACCCATCATCCTTATATTTTATTGAT
GATGATGACATGATGCAACCCGTCATCTTACTACCTCTTT-TGTGGAAGTAATTTACGT------CTATAAAGTACCATC
AAATGTGGCTTACTGG---GT---ACTTGCATATTCATCAGCCACAAATCGAGGGAAG-TTCAGTACCACCGGGCAATAT
GGGAAGGAGTGTGCCCGCGGGTGCCGGCACCGGCAGCACGAA-GGCGTCGTGGCCGGAGGTGGTGGGCTGGTCGGCGCAC
GACGCAGCGCTCCAGATCAGCAAGGACAGGCCTGACGTCTCCATCTCTTTCTACATA-GGCACGGGACGCTGGCCGCCGA
ACCCGGACCTCTCGCGTGTCATCGTGGTGTCAGACGCGGCGACCGGCGTCGTCGTCCAGACGCCCGTCGTCGGTTAGGCC
GCATGCAC-------CACTTGTGCCTGCACACAAATACGTAC-------AGTAGTATCGTATTTGCACTGCTGCAGTTGC
ACAGCACATGAATAAGATCCAGCATTTGAAAGCATGTTCCTATTTGAGGCAG-------CGGGGTGCATATGAATAAAAT
CCAACATTTGAAAGCAGGTTTCATTACGTGGATGATAGAGTACTATGATTTTCATATTTGTCTTCTC--------CTTAC
TGCATTATCATACATGTAGCA----TAGGTTCAGTGGTTGCATCTCTAACATCGATCAGGTTCAGGCCCATGTGTTGAAG
AGAATTTAGATTGATTTCTTTTCCTAGACTAATTTTAGAATGACCGAGCATGCATGGTTTGTGGTTTGGCAGTCTTTCC-
AACAAACTAACCTACTTACGAATCAAAGA-----------CCGTTGAAAGGGGCCGCCA--TGAAAGAAACATAAT----
---------------------------------AGTCCAAGGAGGTCGTATGCAACTAGCAGTCCATCTATCTGAGAAGT
GACGACGCC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTCCAAAGCTGAATGGTATCCGACGGACGCAACT-------
----------TTTTTGGGCACAGCTGGCTTCCCATCTCTG-----------TG----------TGAACCGATCGAGTAGC
CTCCAAGCTGCATCTGGCACACGCCCAGGCGCTAGCTAGATTATGAGCGCTTGAGCAAGGCTAATCTCTCGCCTGGACGG
ACCTCGGCCAGGCAAGCCATGCATGTCACTTTAACTGTGAATGTTAACTATGTTTTCACGATGCCACTCTTACCGAAGCC
GTGCTTGCTTGCATCACATTTGCATCAACAAATGATTTTGTGATCACAGGCTTGTACCAAACAAACGAGTTTAAAATGTA
CTCAATTGGGCTAAGGTCCGAAAAGTTGCTAATAAAAGGTCGTAAAATGGGTGTGCACGTGTGCATATTGTATGTGAATC
GAA--CTAGACAGGGAACTGCAAAGATCATACTACTTT-----TATACTACTGGTGGTGAGCGACCTGAGGTAATCAGCT
TGCATGTGGTGAAGTTACTTTCAAGTCTTCCCCTGCCATGTCGATGGCTCGAAGTAAAATCCAATGATTAACC-------
------------------------------------------------------------------
>chr5A_640
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TAGAAGAGACACCAGTCT---GAACACGTGCTTGGCTATCCTCGATGT--------------GCTCGGTAGTCTGCAC-G
AGTCATCAAGTTTCTTCCTGCTTTTCCTAGAAAGAAAGGAGAATGAGAAGGGCTGCCATGCTCTCCTCTCCTAGT---AA
CCGA-CGCTGGCCATCAGCCAACAAAGGACGGCGGTGTC------CGCCATGCAACCCATAATCCTTATCTTTTATT---
GATGATGACATGATGCAACCCGTCATCTTACCACCTCTTTCTGTGGAAGAAATTTGCGT------CTATAAAGTAGCATC
AAATGTGGCTTACTAG---GT---ACTTCCATATTCATCAGCCACAAGCCGATGAAAGTTTCAGTAGCACCGGGCAATAT
GGGGAGGAGTGTGCCCGCGGGTGCCGTCGCCGGCAGCAAGAA-GGCGTCGTGGCCGGAGGTGGTGGGCTGGCCGGCGCAC
GACGCAGCGCTCCAGATCAGCAAGGACAGGCCTGACGTCTCCATCTCCTTGTACATA-GGCACGGGCCCCTGGCCGCCGG
GCCCGCACCCCTGGCGTGTCGTCGTGGTGTCAGACGCGGCGACCGGCGTCGTCGTCCAGACGCCCATCGTCGGTTAGGCC
GCATGCACCCCTTGACCCTTGTGCCTGCACACGGATACGTAC-------AGTAGTATCATATTTGCGTTGCTGCAGTTGC
ACAGCATATGAATAAAATCCAACATTTCAAAGCATGTTTCAATTTGAGGCAGGGTCTTGTGGGATAA--ATGAATAAAAT
CCAACATTTGAAAGCAGGTTTCAATACGTGGATGATACAGCAGTATGTTTTCCATAATTTTCTTCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr5A_647
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGAGACCAATCTGAAGAACACGTGCTGGGCTATTTTCGATGTACGATAGTCCACGGGCTCGCTAGTCTGCACTG
AGTCATCAAGTTTCTTCCTGCTTTTCCTAGAAAGAAAGGAGAATGAGAAAAGCTG-CATGCTCTCCTCTCCTAGT---AA
CCGA-CGCTGGCCATGAGCCAATACAGGACGGCGGTGTC------CGTGATGCAACCTGGCATCCTTT------------
----------------AATCCATCATCTTACCACCTCTTG-TGTGGAAGTAATTTACTCCTACACCTATAAAGTATCATC
AAATGTGGCTTACTGC---AT---ACTTGCATATT-ATCAGCCACAAGTCAAGGGAAGTTTCAGTACCACAGGGCAAAAT
GGGGAGAAGTGAGCCCGCGGGTGCCGTCGCCGGCCGCACGAA-GGTGTCGTGGCCGGAGGTGGTGGGCTGGACGGAGCGC
GATGCAGCACTCCAAATCAGAAGGGACAGGCCTGACGTCTCGATCTCCTACCATACACGGCACGGCGCCTTGGCCGCCGG
GGCTGCACCCCTGGCGCGTGATCATGGTGTCAGACGCGTCGACCGGTTTCGTCGTCTAAACGCCCATAGTCTGTTAACGT
GGATGCATCCCTTG-------TGCGT--GCACGGATACGTATATATAGTAGTAGTATCGTATAGCGAT-------GTTGC
ACGGCACATGAATAAAATCCAACATTTGA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr5A_760
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AAAAGTTG-CATGATCTCCTCTCCTAGTAATAA
CCGA-CGCTGGCCATCAGCCAACAAAGGACGGCGGTGTCTACCAGCGCCATACAACCTATCGTCC-TTTTCATTTAT---
--TGATGACATGATGCAACACGTCATCTTACCACCTCTTC-TGTGGAAGTAATTTGCGT------CTATAAAGTACTATC
AAATGTGGCTTACTAG---GTAGTACTTGCATATTCATCAGCCACAAGCCGAGGAAAGTTCCAGTACCACCCGGCAAAAT
GGGGAGGGTTGAGCCCGCAGGTGCCATCGCCGGCAGCACGAA-GGCATCATGGCCGGAGGTGGTGGGCTGGCCGGCGCAC
GACGCAGCGCTCCAGATCAGCAAGGACAGGCCTGACGTCTCCATCTTCTACTACATA-GGCACGGGACGCTGGCCGCCGA
GCCCGTACCACTCGCGTGTCATCGTGGTGTCAGATGCGGCGACCGGCGTCGTCGTCCAGACACCCGTCGTCGGTTAGGCG
GCATGCAC-------CCCTTGTGCCTGCACACGGATACGTAC-------AGTAGTATCGTATTTGCATTGCTGCAGGTGC
ACAGCACATGAATAAGATCCAACATTTGAAAGCATGTTCCAATTTGAGGCAG-------TGGGGTGC--ATGAATAAAAT
CCAACATTTGAAAGCAGGTTTCATTATGTGGATGATACAGTACTTTGATTTTCATATTTTTCTTCTCTAGCAATCCTCAC
TGCATTGTCATACATGTAGCACATATAGGTTCGTTTGTTGCGTCTCGAAC----ATCAGGTTGAGGCCCACTTGTTGAAG
AGAATGTAGATTGATTTCTTTTTCTAGACTAATTTTAGAATGACCAATCATGCATGGTTTGTGGTTTGCCAGTCTTTCCC
AACAAACTAACC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr5A_760
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------AAAAGCTG-CATGATCTCCTCTCCTAGTAATAA
CCGA-CGCTGGCCATCAGCCAACAAAGGACGGCGGTGTC------CGCCATACAACCGATCGTCCTTTTCATTTAAT---
--TGATGACATGATGCAACACGTCATCTTACCACCTCTTC-TGTGGAAGTAATTTGCGT------CTATAAAGTACCATC
AAATGTGGCTTACTAGGTAGT---ACTTGCATATTCATCAGCCACAAGCCGAGGAAAGTTCCAGTACCACCCGGCAAAAT
GGGGAGGGTTGAGCCCGCAGGTGCCATCGCCGGCAGCACGAA-GGCATCATGGCCGGAGGTGGTGGGCTGGCCGGCGCAC
GACGCAGCGCTCCAGATCAGCAAGGACAGGCCTGACGTCTCCATCTCCTTCTACATA-AGCACGGGACGCTGGCCGCCGA
GCCCGTTCCTCTCGCGTGTCATCGTGGTGTCAGACGCGGCGACCGGCGTCGTCGTCCAGACGCCCTTCGTCGGTTAGGCG
GCATGCAC-------CCCTTGTGCCTGCACACGGATACGTAC-------AGTAGTATCGTATTTGCATTGCTGCAGTTGC
ACAGCACATGAATAAGATCCAACATTTGAAAGCATGTTCCAATTTGAGGCAG-------TGGGGTGC--ACGAATAAAAT
CCAACATTTGAAAGCAGGTTTCATTACGTGGATGATAGA-TAATATGCTTTTCATATTTGTCTTCTCTAGCAATCCTCAC
TGCATTATCATACATGTAGAACATATAGGTTTGTTTGTTGCGTCTCTAAC----ATCAAGTTCAGGCCCATTTGTTGAAG
AGAATGTAGATTGATTTCTTTTTCTAGACTAATTTTAGAATGACCAAGCATGCATGGTTTGTGGTTTGGCAGTCTTTCCC
AACAAACTAACCTTCTTACAAATCATAGAGCCATGCAACTCTGTTGAAAGGGG-CGCCATGTGAAAGAAACAGATTCCCC
CGCAAGAGAAAGAAAGAAAGAAAGAAACAGATCAGTCCGAGGAGGTCGTATGCAACTAGTAGTTCATCTATCTTTTTTTA
AAGAAGGACATACCCCCGGTCTCTGCATCAATCGATCCATGCAGCCATCTTATTAAGAATAAAGTACCAAAGTCTTAGGG
TCGCCGGGGCCCATAATCATAGTGCAAAAACAAAAGAAAACATAAAAAAGGTGCCACATCCAGCGGAACAGAGCAGGCTA
CGATACCTACACATCTAGCCTATTATCAGCTCACCATCTATATCGGCTAAAGATAGCCCGTCTTCCAACAGTTGCACCCA
ATAATCAAACGCTCCCTGGACTCCGCATGAGTGAGTAATGATCACAGACAGATCCACGATGTAGCTCTGTAGATAATCTA
CAAAATATTCATGAAGTTTGTCAATTAAAATCAAATAATTTCTAGAGCAAAGACGCTCCTCCTAGCTGATCCAATCCAAC
GGGACTCAACTTTTTGGGCGCAGTTGGCTTCCCATGTCTATGTGTATGCTTTG----------TGAACCGATCGAGTAGC
CTCCACGCTGCATCTGGCACACGCCCAGGCGCTAGCTAGATTCTGAGCGCTTGAGCAATGCTAATCTCTCGCCTAAACAG
ACCTGGGCCAGGCAAGCCATTCATGCCACTTTAACTGGCCGTTG------------------------------------
----TTGCTTGCATCACATTTGCATCAACAAGCGATTTTGTGTTCACAGGCTTGTACCAAACAAACAAGGCTAAAATGTG
CTGAATTGGGTTAAGGTCCTAAACGTTGCTAATAAAAGGTTGTAAAATGGGTGTTCGCGTGTGCATATTGTGTGTGAATC
GAATTCTAGACAGGGAACTGCAAAGATCATACTACTTTATAGTTATACTACTGGTGGTCAACGATCTGAGGTAATCAGCT
TGAATGTGGTGAAGTTACTTTCAAGTCT----------------------------------------------------
------------------------------------------------------------------
>chr5D_760
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AAAAGCTG-CATGCTCTCCTCTCCTAGTAATAA
CCGA-CGCTGGCCATCAGCCAACAAAGGACGGCGGTGTC------CGCCATACAAACCATCGTCC-TTTTCATTTAT---
--TGATGACATGATGCAACACGTCATCTTACCACCTCTTC-TGTGGAAGTAATTTGCGT------CTATAAAGTACCATC
AAATGTGGCTTACTAG---GT---ACTTGCATATTCATCAGCCACAAGCCGAGGAAAGTTCCAGTACCA-----------
-------------CCCGCAGGTGCCATCGCCGGCAGCACGAA-GGCATCATGGCCGGAGGTGGTGGGCTGGCTGGCGCAC
GACGCAGCGCTCCAGATCAGCAAGGACAGGCCTGACGTCTCCATCTCCTTCTACATA-AGCACGGGACGCTGGCCGCCGA
GCCCGTACCTCTCGCGTGTCATCGTGGTGTCAGACGCGGCGACCGGCGTCGTCGTCCAGACGCCCTTCGTCGGTTAGGCC
GCATGCAC-------CCCTTGTGCCTGCACACGGATACGTAC-------AGTAGTATCGTATTTGCATTGCTGCAGTTGC
ACAGCACATGAATAAGATCCGACATTTGAAAGCATGTTCCAATTTGAGGCAG-------TGGGGTGC--ATTAATAAAAT
CCAACATTTGAAAGCAGGTTTCATTACGTGGATGATAGA-TACTATGCTTTTCATATTTGTCTTCTCTAGCAATCCTCAT
TGCACTATCATACATGTAGCACATATAGGTTCGTTTGTTGCGTCTCTAAC----ATCAGGTTCAGCTCCACTTGTCGAAG
AGAACTTAGATTGATTTCTTTTTC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr5D_760
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AAAAGCTG-CATGCTCTCCTCTCCTAGTAATAA
CCGATCGCTGGCCATCAGCCAACAAAGGACGGCGGTGTC------CGCCATACAACCCATCGTCC-TTTTCATTTAT---
--TGATGACATGATGCAACACGTCATCTTACCACCTCTTC-TGTGGAAGTAATTTGCGT------CTATAAAGTACCATC
AAATGTGGCTTACTAG---GT---ACTTGCATATTCATCAGCCACAAGCCGAGGAAAGTTCCAGTACCACCCGTCAAAAT
GGGGAGGGTTGAGCCCGCAGGTGCCATCGCCGGCAGCACGAA-GGCATCCTGGCCGGAGGTGGTGGGCTGGCCGGCGCAC
GATGCAGCGCTCCAGATCAGCAAGGACAGGCCTGACGTCTCCATCTCCTTCTACATA-GGCACGGGACGCTGGCCGCCGA
GCCCGTACCCCTCGCGTGTCGTCGTGGTGTCAGACACGGCGACCGGCGTGGTCGTCCAGACGCCCGTCGTCGGTTAGGCC
GCATGCAC-------CCCTTGTGCCTGCACAGGGATACGTAC-------AGTAGTATCGTATTTGCGTTGCTGCAGTTGC
ACAACATATGAATAAGATCCAACATTTGAAAGCATGTTCCAATTCGAGGCAA-------TGGGGTGC--ATGAATAAAAT
CCAACATTTGAAAGCAGGTTTCATTACGTGGATGATACAGTTCTATGATTTTCATATTTGTCTTCTCTAGCAATCGTCAT
-GCATTATCATACATGTAGCATATATAGGTTCAGTTGTTGCGTCTCTAAC----ATCAGGTTCAGGTCCACTTGTTGAAG
AGAACTTAGATTGATTTCTATTTC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr5D_846
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TTTTCTATTCAT---
--TGATGACATGATGCAACCCTTCATCTCACTAGATCTTA-TGTGGAGGCAATATACTC------CTATAAAGTATCATC
AAATGTGGCTTGCGAC---CT---ACTTACATTTTCATCACCCGCAAGTCGAGGGTAGCTTCAGTACCACCGGGCATTAT
GGGGAGGCGTGTGCCCGCGGGTGCCATCGCCGGCAGCACGAAAGGCGTCGTGCCCAGAGGTGATGGGCTGGCCGACGCAT
GACGCAATGCTCTGGATCAGCACGGACATGCCTGACGTCTCCATCTCCTTCTACATA-GGCACGGGCCGCTGGCCACCGG
TACCGCAACGCTGGCGTGTCGTCATGGTGTCAGACGCGGTGACCAGCGTGGTCGTCCAGACGCCCGTCGTTGGTTAGGCC
GCATGCAC-------CCCTTGTGCCTGCACACGGAAACATAC-------AATACTATCGTATCTGCGTTGCTGCAGTTGC
ACAGCACATGAATAAAATCCAACATTTGAAAGCATGTTCCAATTCGAGGCAG-------TGGGGTGC--ATGAATAAAAT
CCAACATTTGAAAGCAGGTTTCATTACGTGGATGATACAGTAGCATGATTTTCATATTTGTCTTT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-----------------------------S------------------SSS-S----S------S-S-----S-------
------------------------------------------S--------------S----------------------
----------S---------------------S---------------------------S---S---------------
----------------S------------------S-----S--------------------------------------
---------------------------------------------------S----------------------------
---------------S----------------------S----------------------S------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S--S---------
-------------------------SS----S------------------------------------------------
--------------------------------------------------------------------------------
S---------------------------------S--------------------------S------------------
---------------------------------------S----------------------------------------
-------------------------------------------S--------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S------S--S------------------------SSSSSSSSSS-----------------
--------------------------------------------------------------------------------
----------------------------S---S---------------S--S----------------S---------S-
------------------------------S-------------------------------------------------
----S-------------------S---S-----S------S-S------S-SSSS-SSSSSSSS---------------
--------------S------------S----------------------------------------------------
-----------------------------S--S------S-S-------S------S-----------S----SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_520
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ACAAAAGTTTGGGATGCGGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_2266
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------AGCCTCCCATCTCTGTGTGT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
