>input_sequence_86267
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----------------ATGGTGATGATGGGGCAGCTGGGGAAGCTGGTGGACGGGCTCAGGCCCAAGATGCGGGCCGGTG
GCGGCGGGAAGAAGAAGGCGGC---GGCGGCATACCAGCAGATGGGCAAGACGGACAGCATGAGGGTGGAGATCAAGAGC
CGGCAGGCCCAGAAGCTCATCGCCAAGAACCTCGTCGCCGCCGACTCCATGGGCCGCCGCAGGAGCAGGAACAAGCGCTT
CTTCCTCGCCTTCTGA----------------------------------------------------------------
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>chr2B_1_TraesCS2B01G539000
TTGGCGGCAGCTCCGGCCGGCGGACGAGCGCGCAGATGCCGAGCAGCGCATGCAGAGGGAGCGGGAGGAAGAG---GAGG
AGCGCGCCCGCGTCGCTGCATTGTCTC------------------CGCCGGAGGAGGCAGCCATGA--------------
-CGGTCTATCAAGCCGCCTTTGGTT-GGCCGGGCCGCCTCCCGTTTTCATCGACCTCACCGGCGGCGATGACGACGGCAA
GGGCAAGGGCAAGGC------CAACATCTAGGGCTGTGTGTGGGCGCCAATTTT--TTGTT-----TTTTTATGAATGTT
TAATTAAGTTTAAGTGGACTTTGGCCGGCGGTTAACCGGTCAGTTATTGTAAGTTAA-GTTTCTATTTTTGTTATCTGTG
CCACGCGTGGTTCATTTTGC--TTTT--T-CTTCGCGTGTAAATTTGTGTCCGTCTTTCGTTGGACGCTCAAGCCGACCC
ATATAAAAAAGCGGACACGCACATCCGTTCGGTCAACCCAAACGGACGAAAAACGGACAAAGCGCCCATCCATTTAGATT
GGCACGTTGGAGTTGCTCTCAACTCAGGTCTGAACGCTGCATATATAGAACCACGCACTGTCCAACCGCACACCGGGACA
GTGCGTGGTTGCGACGGTACGCTTTGTAGGGCTGGTGAAGCAGCTGCACCATCCATATTCCTCGCGCCTATTTCGTTTCC
CATTCATCAGTGGTTATTATTCATCTCGTCAACTCAAAACCCAGCGTGTGTCTGTTTGTCTGTCTGGCCGTCTGTCTGTC
ATTCCCTCCGATCAAGAGCTAGAGCCAGTCGTTCTATTTAACCACCACGGGTACCCACCTGTATTCTCCTCCTCACTTCT
GTATGCTTCGTGCTTTCATCTGCCTCTTCCTGCTCAGGTATCTAGCTTGCTCGTTTGTGTGGTATCCATGTCCAACGTGA
GTTTGTCGCGCCGTCGGTTGCCGGTGGAATTCAGCTAATTTGCTTATTTTTTGTACGTGTGTAGAGTTTTTCGTCCGGGG
GAAGGGGGATCCATCCATGGTGATGATGGGGCAGCTGGGGAAGCTGGTGGACGGGCTCAGGCCCAAGATGCGGGCCGGTG
GCGGCGGGAAGAAGAAGGCGGC---GGCGGCATACCAGCAGATGGGCAAGACGGACAGCATGAGGGTGGAGATCAAGAGC
CGGCAGGCCCAGAAGCTCATCGCCAAGAACCTCGTCGCCGCCGACTCCATGGGCCGCCGCAGGAGCAGGAACAAGCGCTT
CTTCCTCGCCTTCTGATCACCAGAGCTAGCTGTTCGTCTTCTTCTTCTTCTTCCTCTTCTTCACAAAGAAGAGCTGTCCT
GCCCTATGTCCTAAGTCCTAACCCGTGAAGTTTAGTGCTAGCTAGCATATGCATACGGTTGCATATAGTGGATGTAAAGA
AAGCAAACAACAAAGCCCTCCGGCCGCTACCACCCGTAACCCCACA------------------------CAGTTGGTGA
TATGTATCTATCTATCTCTATCTCACCCGTGAACTTGCTCTTCCATTTAGCTGTCAAAGAACTTCAACCATTGCAAACTG
GGATCAACGTACGTTTGTTCGGTTAAATTGTACTCCTTCTGTAAAGAAATATAAAATCGTTTAGATCACTTTTTATCAG-
TTGTGCCATTCGCTCAGCAGTACATGTATTGTGTCCGTACGGACGTACAAGTACCAGATGTATATATACAAGTTGTGTTT
AGTCGTGCGGGATCGCTTTACGTACGGTTTCATTGGGTAAACTGTTCCTTCCCAAAGACAAAAC---TTAAGAAAGCAGA
TGAGATGATCCCAAGAAGTACTGCGATGGAATAACACATGAATAATTGTCCATTGGCTTTTCACTCTTTACGCGTGCAGC
CAGTGAACCAAAATGACTGCCACTTGCAGTTACTGTAGCCAATCCTGTTTTCCATCATCCATATTTGACTTCCCTCATGT
CTGACTTTTTTCTCATTCGGCCTATCCATCACCCCCTCCCTCTGAAAATAGAAGCAGCTTAGACAGGCCACCATTATATG
CTCTATACCACCTAAGGGCATCCCAACACGCATCGTCAAAACGCCCACAACCGACCGAT-CAAGCGGTCCGGACGCACTT
TGTTGCCATCCAACATGGTACCCTATCGGTTCGCATGTTTTTTCGTAAATCGGACGCAAATCAGAGGGCTTTGCGGGCGT
CCGGACCGCTGCCACATACGCGTCCGTCCCCAAGACCCAACCATAAAGATACGCCGCGTGAAGCGGCTGCCACGCATTCG
GTCGG
>chr2B_1
TTGGCGGCAGCGCCAGCTGGCGGAGGAGCATGTAGACACCGAGTAGCACATGTAGAGGGAGCAGGAGGAAGAG---GAGG
AGCGCGCCCGCGTCGCCGCATTACCTCTGCCGCAGC------AGACGCCGGAGGAGGCAGCCCCGA--------------
-CGACCTATGAAGCCGCCTTCGGTTGGGCTGGCCCGCCTCCCTCCTTCACAAACCTCACCAGTGGCGATGATGACGGCAA
GGGCAAGGGTAAGGC------GGACGTCTAGGGATGCGTGAGGGAGCCAATG--------T-----TTTTTATGAATGTT
TAATTAAGTTTAAGTGGACTTTGGCCGGCGGTTGACCGACCAGTTATTGTAAATTAA-GTTTTTATTTTTGTTATCTGTA
CCACGTGTGGTTCATTTTA-TTTTTT--T-CTTCGGGTGTAAATTTGGGTCGGCCTTCCGTTGGACGCTCAACCCGACCT
GTTTGAAAAAGCGGACACGCACATCCACCTGGCCAACCCAAACGGACTAAAAATAAACAATGCGCGGGTCCGTTTGGGTC
GCCGCGTTAGAGTTGATCT-------------------------------------------------------------
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>chr4D_1
TTGGTGGCAGCGCCGGCCGGT-GGAGAGCGCGCAAATGCCGAGCAGCGGATGCAGAGGGAGCGGGAGGAAGAG---AAGG
AGCGCGCCCGCGTTGCCGCAGTGCCTCCGCCGCAGC------AGACGCCGGAGGAGGCAGCCCTGG--------------
-CGGCCTATCAAGCCGCCTTCGGTTGGGCCGGGCCGCCTCCCGTCTTCATCGACCTCACCGGCGGCGATGACGACAGCAA
GGGCAAGGACAAGGC------CGACGTCTAGGGCTGCGTGCGGGTGCCAAC--------AT-----TTTTTATGAATGTT
TAATTAAGTTAAGTGGAC--TTGGCCGGCCGTTGACCAGCCAGTTATTGTAAATTAA-GTTTATATTTTTGTTATCTATG
CCACGTGTGGTTTATTTTG-TTTTTT--CTCTTCGCGCGTAAATTTGGGTCCGCCTCTTGTTGGGCGTTCAAGCCGACCA
ATATGAAAGAGCGAACGCGTACGTTCACCTGGCCGACCCAAACAAACAAAAAGCGGATAAAACACGTGTCCATTTGGGTC
GGCGCGTTGGA---------------------------------------------------------------------
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>chr4D_1
TTGGCGGCAGCGCCGGCTTGCGGAGGAGTGGGACGACGTGGAGCAGCTCATGCAGAGGGAACGGGAGGCAGAGGAGGAGG
AGCGCGCCCGCGCCGCTGCATTGCCTCAGCCGCAGCCGCAATAGACGCCAGAGGAGGCAACCCTGG--------------
-CGGTCTACCAAGCTGCCTTTGGTTGGGCCGGACCGCCTCCCGTCTTCATCGACCTCACCGGCGGCGATGACGACGGCAA
GGGCAAGGGCAAGGC------CGACGTCTAGGGCTGCGAGGAGGCATCAACTTT--TTTAT-----GTTTAATTAATGTT
TAATTAGGTTTAAGTGGACTTTGATTGGCGGTTGACCGGCCAGATATTGTAAATTAAA--------GTTTGTTTTCTGTG
CCACGTGT--------------TTTT--TTATTCGCGCGCAAATTTGCGTCCGCCTCCCATTGGGCGGTCAAGCCGACCC
ATATGGAAAAGCGGACGCGGATGTCCGCATGGCTGATCCAAACGGACGAAAAACGGACAAAGCGCGTGTCCGTTTGAGTC
ACCCCGTTAGAGTTGCTC--------------------------------------------------------------
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>chr7D_1
TTGGCGCTAGCGCCAGCTGGCGGACGAGCGCGCAGATGCCGAGCAACGCATGCAGAGGGAGCGGAAGGAAGAG---GAGG
AGCGCGTCCGCGTCGCTGCA--------------GC------AGACGCCGGAGGAGGCAGCTCTGG--------------
-CGGCCTATCAAGCCACCTTCGGTTGGGCTGGGTCGCCTCCCGTCTTCAACAACCTCACCGGTGGCGATGACGACGACAA
GGGCATGGGCAAGGC------CGACGTCTAGGGCTGCGTGCGGGCGCCAACTTT--T-GTTTT-TGTTTTTATGAATGTT
TAATTAAGTTTAAGTGGACTTTGGCTGGCGGTTAACCAGCCAGTTATTGTAAATTAA-GTTCCTATTTTTGTATTCAA-G
CCACGCGTGGTTTATTTTGG--TTTT--TTTCTGGCGTGTAAATTTGGGTCCGCCTCTCATTGGATGCTCAAGCCGACCC
ATATGAAAAAGTGGACGCGCCTGCCTGCCTAGCCGACCCAAACAAACAAAAAATAGACAAACCACACGTCCATTTGGATC
GGCGCGTTGATGTTGCTCT-------------------------------------------------------------
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>chr5B_1
TTGGCGACAGCTTTGGCTGGCGGGCGAGCGTGCAGATGCCGAGCAGCGCATGCAGAGGGAGAGGGAGGAAGAG---GAGG
AGCGCGCCTGCGTCGCCGCATTGCCTCTGCCGCAGC------AGACGCCGGAGTAGGCAGCCCTAG--------------
-CGACCTATCAAGCCGCCTTCGGTTGGGCCGGGTCACCTCCCATCTTCATCGACCTCATCGGCGGCGATGACGACAGCAA
GGG------CAAGGC------CAAAGTCTAGGGTTGTGTGCGGGCGACAACTTT--TTGCTTT-TGTTTTTATGAATGTT
TAATCAAGTTTAAGTGGACTTTGGCCGGTGGTTGACCGGCCAATTATTGTTAATTAA-GTTTCTATTTTTGTTATTTGTC
CTCCGTGTGGTTCATTTTATTTTTTT--GTCTTCGCACATAAATCTGGGTCCGCTTCCCGTTGGGTGCTCAAGCCGACCC
ATACGAAAAAGTGGACGCACATGTTCGTCTGGCCGATCCAAACGGATGAAAAACGAAAAAAGC-----------------
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>chr5D_1
TTGGCGGCAGCACCGGCTGGCGAAGGAGCGCGCAGACGTCGAGCAGCACATGCAGAGGGAGCGGGAGGAAGAG---GAGG
AGCGCGCCCGCGTCACCGCATTGCCTCCGCCGCAGC------AGACGCTGGAGGAGGCAGCCCTAG--------------
-CGGCCTATCAAGCCACCTTCGGTTGGGCCGGCCCGCCTCCCGTCTTTATCGACCTCACCAGCGGCGATGACAACGGCAA
GGGCAAGGTCAAGGC------CGATGTCTAGGGCTGCGTGCGGATGCCAACTTT--TTGTTTT-TGTTTTTATGAATGTT
TAATTAAGTTAAAGTGGACTTTGGCCGGCGGTTGACCGGGCAGTTATTGTAAATTAA-CTTTTTATTTTTGTTATCTATG
TCATGTGTGGTTCATTTTG-TTTTTT----TTTCGCGCGCAAATTTTGGTCCTTGTCCCGTTGAACGCTCAAGTTGACCC
ATTTGGAAAAGCAGAAGCGTACGTCAGTCTGGCCGACCCAAACGGATAAAAAACGGACAAAGCGC---------------
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>chr3B_1
TTGGCGGCAGCGCCAGCTGGCAGAGGAGCGCACAGATGCCGAGCAGCTCATGCAGAGGGAGCGGGAGGAGGAG---GAGG
AGCACGCCCACATCACCGCATTGCCTCAGCCACAAC------AGACGCCGGAGGAGGCAACCCTGG--------------
-CGGCCTATCAAGCTGCCTTCGGTAGGGTTGGCCCGCCTCCCGTCTTCATCGACCTCACCGGTGGCGATGACGACGGCAA
GGGCAAGGGCAAGGC------TGATGTCTAGGGCTGCGAGTGGGCGTCAACTTT--T-CTTTAATGTTTTTATAAATGTT
TAATTAAGTTTAAGTGGATTATGGCTGGCGGTTGACCGGCCAGTTATTGTTAATTAAAGTTTCTAGGTTTGTTTTCTGTG
TCACGTGTATTTATTTTTG-TTTTTT----ATTCACGCAC-AATTTTGGTCCGCCTTTCATTGGGCGGTCAAGCCGGCAC
ATATGGAAAAGTGGACGTGCACATCTGCCTTGCCGACCCAAACGGAAGAAAAGCGGACAAAGCGCGCGTTCATTTGGTTC
GCC-CGTTGGAGTTGCTCTAAA----------------------------------------------------------
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>chr4A_1
TTGGCGGCAGGGTCGGCTGGCGAACAAGCGCGCAGACGCCGAGCAGCGCATGCAGAGGGAGCGGGAGGAAGAG---GAGG
AGCGCGCCCGCGTCGCGACATTGCCTCCGCCGCAGC------AGGCGTTGGAGGAGGCAGCCCTGG--------------
-CGGCCTATCAAGCCGCCTTCGGTTGGACTAGGCCGCCTCCCGTCTTCATTGACCTTGCCGGCGACGATGACGATGGCAA
GGG------TAAGGC------CGACGCCTAGGACTACGTGCGGACACCAACTTT--TAGTTTT-TGTTTTTATGAATGTT
TAATTAAGTTTAAGTGGACTTTGGTC-GCGGATGACCGGACATTTATTGTAAATTAA-GTTCCTATTTTTGTTATATTTG
CCATGCGTGGTTCATTTTG-TTTTTCTATTATATGCACGTAAATTTGGATCCGCCTTTTGTTAGGCGCTCAAGCCGACCC
ATATGAAAAAGCAGGCGCACCCGTCTGCTTAGCCGACCCAAACGGACGAAAAGCGAACAAACCGTAAATTCGTTTGGATC
GGCGCGTTGGAATTG-----------------------------------------------------------------
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>chr2B_2
-TGGCGGCAGCGCCGGCTAGCAGAGGAGCGCGCAGACGCGGAGCATCACATGCAGAGGGAGCGGGAGAAAGAG---GAGG
AGCGCGCCCGCGTCGCCACATTGACTTAGCTGCAGC------AGACGCCGGAGGAGGCAGCCCTGG--------------
-C---------------CTTCGGTTGGGCCTGCCCGCCTCCCGTCTTCATCGACCTCACTTCTGGCGATGACGACGGCAA
GGGCAAGGGCAAGGC------CGACGTCTAGGGCTACGTGTGGGCGCCAACTTT--T--TTTT-TGTTTTTATAAATGTC
TAATC------AAGTGGACTTTGGCCGGCGGTTGACCGACCAGTAACTGTAAATTAA-GTTTTTATTTTTGTTATCTGTG
CCACGTGTGGTTCATTTTG-TTTTTT----CCTCACTCGCAAATTTGGGTCCGCCTCTCGTTGGGCGCTCAAACCGATCC
ATTTGACACAGCGGACGCGTACGTCCGCTGGACCGACCCAAACGGACGAAAAGTGGACAAAGCGCGCGCCCGTTTGGGTC
GCCGCATTGGAGTTGCT---------------------------------------------------------------
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>chr7B_4
---GCGGCAGCGCCGGCTGGAGGACAAGCGCGCAAACGCCGAGCAGCGCATGCGGAGGGAGTGGGAGGAAGAG---GAGG
AGTGCGCCCATGTTGCCACATTGCCTCCGCCGCAGC------AGACGCCGGAGGAGGCAGCCCTGG--------------
-CAGCCTATCAAGCCGCCTTCTATTGGACCGGGCCGCCTCCCGTCTTCATCGACCTCACCGGCGGCGATGACAATGGCAA
GGTCAAGGGCAAGGGCAAGGGCAACGTCTAGGGTTGCGCGCGGGCGCCAATTTTTCT--TTTT-TCTTTTTATGAATGTT
TAATTAAGTTTAAGTGGACTTTGGCCGGCGGTTGACCGGCCAGTTATTGTAAATTAA-GCTTCTATTTTTGTTATCTGTG
CCACGTTTAGGGTTCGTTC-TTTTTG----CTTCGCGCGTAAATTTGGGTCCGCCTCCCGTTGGGTGCTCAGGCCGACCC
ATATGAAAATGCGCATGCGCACGTCCGTCTGGCCAACCCAAATAGACGAAAAGCGGACAAAGTGCATGTCTGTTTGGATC
GACGTGTTGGAGTTGCTCTAAC----------------------------------------------------------
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>chr4D_6
-----GGCAGCGCCGGCTGGTGGACGAGCACGCAGACGCCAAGCAGCGCATGCAGAGGGAGCGGGAGGAAGAG---GAGG
AGCGCGCCCGCGTCGCCGCATTGCCTCCCCCGCAGC------AGACGCCAGAGGAGGCAGCACTGGTGGCCTATCAAGGC
GC---------------CTTCGGTTGGGCCGGGCCGCCTCCTGTCTTCATCGACCTCACCGGCGGCTATGACGACGGCAA
GGGCAAGGGCAAGGC------CAACGCCTAGGGCTACATGCGGGCGCCAAC-TT--TTGTTTT-TGTTTTTATGAATGTT
TAATTAAGTGTAAGTGGACTTTGGCCGGTGGTTGACCGGCTAGTTATTGTAAATTAA-GTTTTTATTTTTGTTACCTGTG
TCATGGGTGGTTCATTTTGTTTTTTT----CTTCGCGCGCAAATTTGGGTCCGCCTCCCGTTGGGCGCTCAAGCCGACCC
ATATGAAAAAATGGACACATACGTCCGCCTGGCCGACCCAAACGGACGAAAAGCGGACAGAACGTGTGTCCGTTTCGATT
GGCGTGTTGGAGTTGCTCTCAAC---------------------------------------------------------
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>chr2D_775
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------------------------------GTTCTATTTAACCACCACGGATACCCACCTGTATTCTCCTCCTCACTTCT
GTATGCTTCGTGCTTTCATCTGCCTCTTCCTGCTCAGGTATCTAGCTTGCTCGTTTC--TGGTATCCATGTCCAACATGT
GTTTGTCGCGCCGTCGGCTGCCGGTGGAATTCAGCTAATTTGCTTATTTTTTGTACGTGCGTAGAGTTTTTCGTCCGGGG
GAAGGGGGATCCATCCATGGTGATGATGGGGCAGCTGGGGAAGCTGGTGGACGGGCTCAGGTCCAAGATGCGGGCCGGTG
GCGGCGGGAAGAAGAAGGCGGCGGCGGCGGCATACCAGCAGATGGGCAAGACGGACAGCATGAGGGTGGAGATCAAGAGC
CGGCAGGCCCAGAAGCTCATCGCCAAGAACCTCGTCGCCGCCGACTCCATGGGCCGCCGCAGGAGCAGGAACAAGCGCTT
CTTCCTCGCCTTCTGATCACCAGAGCTAGCTGCCCG---------TCTTCTTCTTCTTCTTCACAAAGAAGAGATGCCCT
GCCCTAT-------GTCCTAACCGGTGAAGTTTAGTGCTAG----CATATGCGTACGGTTGC--ATAGTGGATGTAAAGA
AAGCAAACAGCAAAGCCCTCCGGCCGCTACCACCCGTAACCCCACATGCGAATGATGTAGCCGCCGCACACAGTTGGTGA
TATGTATCTATCTATCTCTATCTCACCCGTAAACTTGCTCTTCCATTTAGCTGTGAAAGAACTTCAACCTTTGCAAACTG
GGATCAACGTACGTTTGTTCGGTTAAATTGTATTCCTTCTGTAAAGAAATATATAATCGTTTTGATCACTTTTTATCGGT
TTGTGCCATTCGCTCAGCAGTACATGTATTGTGTCCGTACGGACGTACAAGTACCAGATGTATGTATACAAGTTGTGTTT
AGTCGTGCGGAATGGCTTTACGTACGGTTTCATTGGGTAAGCTGTTCCTTTCCAAGGATAAACTTAATTAAGAAAACTGA
TGAGATGATCCCAAGAAGTACTGCGATGGAATAACACATGAATAATTGTCCATTGGCTTTTCACTCTTTACGCGTGCAGC
CAGTGAACCAAAATGACTGCCACTTGCGA---------CCAATCCTGCTTTCCATCATCCATATTTGACTTTCCTCATGT
CTGACTTTTTTCTCATTCGGCCTATCCATCACCCCCTCCCTTTGAAAATAGAAGCAGCTTAGACAAGCCACCATTATATG
CTCTATACCCCCTAAGGGCATCCCAACACGCATCGTCAAAACGCCCACAACCGACCGGACCAAGCGGTCCGGACGCACTT
TGTTGCCATCCAACATGGTACCCAATCCGTCCGCAGGTTTTTTCGTAAATTGGACGCAAATCAGAGGGCTTTGCGGGCAT
CCGGACCGCTGCCACATACGCGTTCGTCCCCAAGACCCAACCATAAAGATACCCCGCGTGAAGCGGCTGCCACGCATTCG
GTCGG
>SNPs
--------------------------------------------------------------------------------
-----------------------S--------------------------------------S-----------------
--------------------------------------------S-----------------------------------
-------------------------S------------------------------------------------------
---------------------------------------S------------S---------------------------
-------------------S---------------------------S--------------------------------
----S------------------------S--S--------------------------------S---------S----
---S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S-----------------------------
--------------------------------------------------------SSS-----------------S--S
-----------------S-----------------------------------------S--------------------
-------------------------------------------------------------S------------------
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--------------------------------SS--SSSSSSSSS--------S-------------------S--S---
-------SSSSSSS---------S-----------------SSSS-------S---------SS----------------
---------S----------------------------------------------------------------------
------------------------------S-----------------------S--------------S----------
--------------------------------S--------------------S--------S--------------S--
---------------------------------------------------------------S----------------
----------S--S--------------------------S---------S----S--S---SS-----------S-S--
--------------------------------------------------------------------------------
---------------------------SSSSSSSSSSS---------S-----------------------S--------
-----------------------------------------S-----------------------S--------------
---------S-----------------------------------------------SS---------------------
-----------------------S---S--S----S--------------S---------------------------S-
-----------------------S----------------------------S---------------------------
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>forward_774
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----------------------------------CAAAACCCAGCGTGTGTCTG--------------------------
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>reverse_2090
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---------ACCTAAGGGCATCCCAACAC---------------------------------------------------
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