>input_sequence_86228
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----------------------ATGTGCACCTCTGATATCTATACTGACTCCACTCTGGTACATCATGAGTCGAAGCACA
TCGAACGAAGGGGTGTGGAGAAGAGACATCGAACGGGAGGCGAGAAGGGTGGTGGACCACCGAGCAAGGGCGCTCAACGG
CTCTGTCCCTGCCCCATGGTGGCCGCTCCTCGCAAGGGGATTAAGGGAGTCATGAAACAACAGAGGGTTCAGCTCCTTTG
CAGTTCGATTCTTACTGTATAG----------------------------------------------------------
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-----------------------------------------------------------------------
>chr7A_1_TraesCS7A01G528400
CTCACCTAGCTAAATACTC-TGCTTTGCCACCTGGCCAGAT-----TTTTTTTGCACATTTATAATACAGTTGAGTGGGT
TAAAACTATTGCAAAACAACACACACTTTTATAATCTCTAAATACATATTTAGTTCAGTCCATATGTATATCTGAAGTAA
CTTATCAACGTCTCCTCGTGCATGGGACCCAAATACTGTACGTCCGAAATCACGAACAAATTGACATGTTCGCTAGAATT
CCACGACGGCATGCAAAATCACAAATAAGTATTGTCTTGTTGTATAAAGAGAATTTTCTTTGCGAAAAAAACTGATATAG
CTTGACATGTGGAACCTGGACTTACCCTCGTTGACACCACTAATATGTTAAATAGCTTCAAAATAATCAAACACATACTT
GTCTTCGTATTTCCAGCCTCTCCACACAAGCGACATTTCCCAACAAGTTCCTAAAGGAGCTCATGGTCAGTCCATTTTAG
TGAAACTGAACCTCAACAAATGGGGCAAATATAAAGACACCAAGTTTCAAGTAATTCATTGCAGTTTCAGTTATC-----
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--------------------------------------------------AGTTTAGGTGCAGCTCACACAACAACCTGC
AATTATATACCTATTACAGAATTATTTTGAAGGCATGTTAATACTTAGAATAAAAAAATAACCCCACACGAGGGTAACTA
ATTTATACCAATGAGCATCCTAGCTCTCTCATGACCATAATGCTGCCATAACCCCACTGCAGCACGCCTTGCCCGCCATA
GACTGCTGCACACCCCTGAGCGCGTCCTATACTTCAGTCTTCTTATTCGTAGTGTAGATTTCATTACATGTTTGTAAACT
AAATAAAGATTATTTGTATCAGCAATGTACATTTTCTTCAGGGCGATAGATATAAATTGATGTACTATCTATACATAGAA
AGCATTGCATTGATACCTCCAACTATGAAACTGGAATAAGTAGAGTTGAGATAAAATTGGAGATGGTTAACAATTAAGGA
-AAAAAAACTAAAGAGGACCCCATGTGCACCTCTGATATCTATACTGACTCCACTCTGGTACATCATGAGTCGAAGCACA
TCGAACGAAGGGGTGTGGAGAAGAGACATCGAACGGGAGGCGAGAAGGGTGGTGGACCACCGAGCAAGGGCGCTCAACGG
CTCTGTCCCTGCCCCATGGTGGCCGCTCCTCGCAAGGGGATTAAGGGAGTCATGAAACAACAGAGGGTTCAGCTCCTTTG
CAGTTCGATTCTTACTGTATAGGTGTTGTAGCTGTTCAAAAAATTGAGACATGGTTATTTCAAGAAACTGGAAGGACTAA
GTGTAACAAGCATGTTCATATATTGAACTTGTATGAGCAATGAGAAAGGAAGGCTGAATATAGAGCTTGGAAGGTTGGTA
ATTTGCTTCCTACACAATAACAGGAAGGATAATTAGAAGAGGCTAAGGCAAGAGAGATGTACCTGGTTCTTGGAGACTCA
GAACAGTAATGTACAATTCAAATAGACCAGATGTTGTTGAAAGAGCAACACTC--CACG----ATGGAGATGGACCACCC
GCCATGGAGGAGAAATACTCAAGATGCACCTGGTTTTCAGACTTGGACTCATTTGCTAGATCTCTTAATCTTAGCCAAAT
TTAAAAGTATTTCAGAATGCAGTTAATTGTTTAAAGCAAAAGGCAACCTCATTCAAAGCAAATAGAGTATTTTAAAAAAT
ATGCTATGTTTCAGAGAGCATTCAGCAGCTACGTCATGTTTTCTTTCAGAATATACGTATTGCGAATAGCTTGCATCTGA
GTCAAGTGCGCACATAAAAATATGCACAATACATGGAATTTTCAAACCTATAAACTACTTCATTTTAGTAGTTGTCTCAC
AAAGAATTAAATATTAAATTCATTTGTGGGGAAAAATTAACATCATATCATGAAGAACAGTACTGTACGC---GTCTTCA
TTGGTCCTGTTTGGCCCTGCTTTTTGAATTATTGTGTGGGTTACAAAAGATTGTAGTATACTTTGTACTCTCTTCATTGC
ATGAAAGAAAAGAAAAGACTAATCTCGCACATATTTTTTCCAAATTAAAATTGCTATAACAATATCATCAATTGCTAGTA
CTGTTAACTGTATCCATGCCACTGTTGTTGCCTAGATGCTGCAAATAATTCATCTCCAGCTATATTCAGAACCATTACAT
TTTTCACTTAGGAAACATGCATGCAACAATGTATTTCACGCACGAATCCAAAACCCATTACCAGTAGGACT
>chr2D_1
CTCACCTAGCTAAATACTC-TGCTTTGCCACCGGGCCAGAT-----TTTTTTTGCACATTTATAATACAGTTGAGTGGGT
TAAAACTATTGCAAAACAACACACACTTTTATAATCTCTAAATACATATTTAGTTCGGTCCATATGTATATCTGAAGTAA
CTTATCAACGTCTCCTCGTGCATGGGACCCAAATACTGTACGTCCGAAATCACGAACAAATTGACATGTTCGCTAGAATT
CCACGACGGCATGCAAAATCACAAATAAGTATTGTCTTGTTGTATAAAGAGAAATTTCTTTGCGAAA-AAACTGATATAG
CTTGACATGTGGAACCTGGACTTACCCTCGTTGACACCACTAATATGTTAAATAGCTTCAAAATAATCAAACACATACTT
GTCTTCGTATTTCCAGCCTCTCCACACAAGCGACATTTCCCAACAAGTTCCTAAAGGAGCTCATGGTCTGTCCATTTTAG
TGAAACTGAACCTCAACAAATGGGGCAAATATAAAGACACCAAGTTTCAAGTAATTCATTGCAGTTTCAGTTCTC-----
--------------------------------------------------------------------------------
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--------------------------------------------------AGTTTAGGTGCAGCTCACACAACAACCTGC
AATTATATACCTATTACAGAATTATTTTGAAGGCATGTTAATACTTAGAAT-AAAAAATAAGCCCACATGAGGGTAACTA
ATTTATACCAATGAGCATGCTAGCTGTCTCATGACCATAATGCTGCCATAACCCCACTGCAGCACGCCTTGCCCGCCATG
GGCTGCCGCACACCCCTGAGCGCGTCCTACACTTCAGTCTTCTTATTCGTAGTGTAGATTTCATTACATGTTTGTAAACT
AAATAAAGATTATTTGTATCAGCAATGTACATTTTCTTCAGGGCGATAGATATAAATTGATGTATTATCTATACATAGAA
AGCATTGCATTGATACCTCCAACTATGAAACTGGAATAAGTAGAGTTGACATAAAATTGGAGATGGTTAACAATTAAGGA
-AA-AAAACTAAAGAGGACCCCATGTGCACCTCTGATATCTATACTGACTCCACTCTGGTACATCATGAGTCGAAGCACA
TCGAACGAAGGGGTGTGGAGAAGAGGCGTCGAACGGGAGGCGAGAAGGGTGGTGGACCACCGAGCAAGGGCGCTCAACGG
CTCTGTCCCTGCCCAATGGTGGCCGCTCCTCGCAAGGGCA-TAAGGGAGTCATGAAACAACAGAGGGATCAGCTCCTTTG
CAGTTCGATTCTTACTGTATAGGTACTGTAGCTGTTCAAAAAATTGAGACATGGTTATCTCAAGAAACTGGAAGAACTAA
GTGTAACAAGCATGTTCATATATTGAACTTGTATGAGCAATGAGAAAGGAAGGCTGAATATAGAGCTTGGAAAGTTGGTA
ATCTGCTTCCTACATAATAACAGGAAGGATAATCAGAAGAGGCTAAGGCAAGAGAGATGTACCTGGTTCTTGGAGACTCG
GAACAGTAATGTGCCATTCAGATAGACCAGATGTTGTTGATCTAGCAACACTC--CACG----ATGGAGATGGACCACCC
GCCGTGGAGAAGAAATACTCAAGATGCACCTGGTTTTGAGACTTGGACTCATTTGCTAGATCTCTTAATCTTAGCCAAAT
TTAAAAGTATTTCAGAATGCAGTTAATTGTTTAAAGCAAAAGGCAACCTCATTCAAAGCAAATAGAGTATTTTAAAAAAT
ATGCTACGTTTCAGAGAGCATTCAGCAGCTACGTCATGTTTTCTTTCAGAATATACGTACTGCGAATAGCTTGCATCTGA
GTCAAGTACGCACATAAAAATATGCACAATACATGGAATTTTCAAACCTATAAACTACTTCATTTTAGTAGTTGTCTCAC
AAAGAATTAAATATTAAATTCATTTGTGGGGAAAAATTAACATCATATCATGAAGAACAGTACTGTACGC---GTCTTCA
TTGGTCCTGTTTGGCCCTGCTTCTTGAATCATTGTGTGGGTTACAAAAAATTGTAGTATACTTTGTACTCTCTTCATTGC
ATGAAAGAAAAGAAAAGACTAATCTCGCACATTTTTTTTCCAAATTAAAATTGCTATGACAATATCATCAATTGCTAGTA
CTGTTAACTGTATCCATGCCACTGTTGTTGTTTGGATGCTGCAAATAATTCATCTCCAGCTATATTCAGAACCATTACAT
TTTTCACTTAGGAAACATGCATGCAACAATGTATTTCACGCACAAATCCAAAGCCCATTACCAGTAGGACT
>chr6D_1
CTCACCTAGCTAAATACTC-TGCTTTGCCACCGGGCCAGAT----TTTTTTTTGCACATTTATAATACAGTTGAGTGGGT
TAAAACTATTGCAAAACAACACACACTTTTATAATCTCTAAATACATATTTAGTTCGGTCCATATGTATATCTGAAGTAA
CTTATCAACGTCTCCTCGTGCATGGGACCCAAATACTGTACGTCCGAAATCACGAACAAATTGACATGTTCGCTAGAATT
CCACGACGGCATGCAAAATCACAAATAAGTATTGTCTTGTTGTATAAAGAGAAATTTCTTTGCGAAA-AAACTGATATAG
CTTGACATGTGGAACCTGGACTTACCCTCGTTGACACCACTAATATGTTAAATAGCTTCAAAATAATCAAACACATACTT
GTCTTCGTATTTCCAGCCTCTCCAGACAAGCGACATTTCCCAACAAGTTCCTAAAGGAGCTCATGGTCTGTCCATTTTAG
TGAAACTGAACCTCAACAAATGGGGCAAATATAAAGACACCAAGTTTCAAGTAATTCATTGCAGTTTCAGTTCTC-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------AGTTTAGGTGCAGCTCACACAACAACCTGC
AATTATATACCTATTACAGAATTATTTTGAAGGCATGTTAATACTTAGAAT-AAAAAATAAGCCCACATGAGGGTAACTA
ATTTATACCAATGAGCATGCTAGCTCTCTCATGACCATAATGCTGCCATAACCCCACTGCAGCACGCCTTGCCCGCCATG
GGCTGCCGCACACCCCTGAGCGCGTCCTATACTTCAGTCTTCTTATTCGTAGTGTAGATTTCATTACATGTTTGTAAACT
AAATAAAGATTATTTGTATCAGCAATGTACATTTTCTTCAGGGCGATAGATATAAATTGATGTATTATCTATACATAAAA
AGCATTGCATTGATACCTCCAACTATGAAACTGGAATAAGTAGAGTTGACATAAAATTGGAGATGGTTAACAATTAAGGA
-AA-AAAACTAAAGAGGACCCCATGTGCACCTCTGATATCTATACTGACTCCACTCTGGTACATCATGAGTCGAAGCACA
TCGAACGAAGGGGTGTGGAGAAGAGGCGTCGAACGGGAGGCGAGAAGGGTGGTGGACCACCGAGCAAGGGCGCTCAACGG
CTTTGTCCCTGCCCAATGGTGGCCGCTCCTCGCAAGGGCA-TAAGGGAGTCATGAAACAACAGAGGGTTCAGCTCCTTTG
CAGTTCGATTCTTACTGTATAGGTACTGTAGCTGTTCAAAAACTTGAGACATGGTTATCTCAAGAAACTGGAAGAACTAA
GTGTAACAAGCATGTTCATATATTGAACTTGTATGAGCAATCAGAAAGGACGGCTGAATATAGAGCTTGGAAAGTTGGTA
ATCTGCTTCCTACATAATAACAGGAAGGATAATCAGAAGAGGCTAAGACAAGAGAGATGTACCTGGTTCTTGGAGACTCG
GAACAGTAATGTGCCATTCAAATAGACCAGATGTTGTTGATCTAGCAACACTCCACACG----ATGGAGATGGACCACCC
GCCGTGGAGGAGAAATACTCAAGATGCACCTGGTTTTGAGACTTGGACTCATTTGCTAGATCTCTTAATCTTAGCCAAAT
TTAAAAGTATTTCAGAATGCAGTTAATTGTTTAAAGCAAAAGGCAACCTCATTCAAAGCAAATAGAGTATTTTAAAAAAT
ATGCTACGTTTCAGAGAGCATTCAGCAGCTACGTCATGTTTTCTTTCAGAATATACGTACTGCGAATAGCTTGCATCTGA
GTCAAGTACGCACATAAAAATATGCACAATACATGGAATTTTCAAACCTATAAACTACTTCATTTTAGTAGTTGTCTCAC
AAAGAATTAAATATTAAATTCATTTGCGGGAAAAAATTAACATCATATCATGAAGAACAGTACTGTACGC---GTCTTCA
TTGGTCCTGTTTGGCCCTGCTTCTTGAATCATTGTGTGGGTTACAAAAAATTGTAGTATACTTTGTACTCTCTTCATTGC
ATGAAAGAAAAGAAAAGACTAATCTCGCACATATTTTTTCCAAATTAAAATTGCTATGACAATATCATCAATTGCTAGTA
CTGTTAACTGTATCCATGCCACTGTTGTTGTTTGGATGCTGCAAATAATTCATCTCCAGCTATATTCAGAACCATTACAT
TTTTCACTTAGGAAACATGCATGCAACAATGTATTTCACGCACAAATCCAAAGCCCATTACCAGTAGGACT
>chr7B_1
CTCACCTAGCTAAATACTC-TGCTTT-CCACCGGGCCAGAT----TTTTTTTTGCACATTTATAATACAGTTGAGTGGGT
TAAAACTATTGCAAAACAACACACACTTTTATAATCTCTAAATACATATTTAGTTCGGTCTATATGTATATCCGAAATAA
CTTATCAATGTCTCCTCGTGCATGGGACCCAAATACTGTACGTCCGAAATCACGAACAAATTGACATGTTCGCTAGAATT
CCACGACGGCATGCAAAATCACAAATAAGTATTGTCTTGTTGTATAAAGAGAAATTTCTTTGCGAAA-AAACTAATATAG
CTTGACATGTGGAACCTGGACTTACCCTCGTTGACACCACTAATATGTTAAATAGCTTCAAAATAATCAAACACATACTT
GTCTTCGTATTTCCAGCCTCTCCACACAAGCGACATTTCCCAACAAGTTCCTAAAGGAGCTCATGGTCTGTCCATTTTAG
TCAAACTGAACCCCAACAAATGGGGCAAATATAAGGACACCAAGTTTCAAGTAATTCATTGCAGTTTCAGTTCTC-----
--------------------------------------------------------------------------------
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--------------------------------------------------AGTTTAGGTGCAGCTCACACAACAACCTGC
AATTATATACCTATTACAGAATTATTTTGAAGGCATGTTAATACTTAGAAT-AAAAAATAACCCCACAGGAGGGTAACTA
ATTTATACCAAAGAGCATGCTAGCTCTCTCATGACCATAATGCTGCCATAACCCCACTGCAGCACGCCTTGCCCGCCATG
GGCTGCCGCACACCCCTGAGCGCGTCCTATACTTCAGTCTTCTTATTCGTAGTGTAGATTTCATTACATGTTTGTAAACA
AAATAAAGATTATTTGTATCAGCAATGTACATTTTCTTTAGGGCGATAGATATAAATTGATGTATTATCTA---------
------------ATACCTCCAACTATGAAACTGGAATAAGTAGAGTTGACATAAAATTGGAGATGGTTAACAATTAAGGA
AAA-AAAACTAAAGAGGACCCCATGTGCACCTCTGATATCTATACTGACTCCACTCTGGTACATCATGAGTCGAAGCACA
TCGAACGAAGGGGTGTGGAGAAGAGGCGTCGAACGGGAGGCGAGAAGGGTGGTGGACCACCGAGCAAGGGCGCTCAACGG
CTCTGTCCCTGCCCAATGGTGGCCGCTGCTCGCAAGGGCA-TAAGGGAGTCATGAAACAACAGATGGTACAGCTCCTTTG
CAGTTCGATTCTTACTGTACAGGTACTGTAGCTGTTCAAAAAATTGAGACATGGTTATCTCAAGAAACTAGAAGGACTAA
GTGTAACAAGAATGTTCATATATTGAACTTGTATGAGCAATGAGAAAGGAAGGCTGAATATAGAGCTTGGAAGGTTGGTA
ATCTGCTTCCTACATAATAACAGGAAGGATAATCAGAAGAGGCTAAGGCAAGAGAGATGTACCTGGTTCTTGGAGACTAG
GAACAGTAATGTGCCATTCAAATAGACCAGATGTTTTTGAAAGAGCAACACTC--CACTATATATGGAGATGGACAACCC
GCCGTGGAGGAGAAATACTCAAGATGCACCTGGTTTTGAGACTTGGACTCATTTGCTAGATCTCTTAATCTTAGCCAAAT
TTAAAAGTATTTCAGAATGCAGTTAATTGTTTAAAGCAAAAGGCAACCTCATTCAAAGCAAATAGAGTATTTTAAAAAAC
ATGCTATGTTTCAGAGAGCATTTAGCAGCTACGTCATGTTTTCTTTCAGAATATACGTACTGCGAATAGCTTGCATCTGA
GTCAAGTACGCACATAAAAATATGCACAATACATGGAATTTTCAAACCCATAAACTACTTCATTTTAGTAGTTGTCTCAC
AAAGAATTTAATATTAAATTCATTTGTGGGGAAAAATTAACATCATATCATGAAGAACAGTACTGTATGC---GTCTTCA
TTGGTCCTGTTTGGCCCTGCTTCTTGAATCATTGTGTGGGTTACAAAAAATTGTAGTATACTTTGTACTCTCTTCATTGC
ATGAAAGAAAAGAAAAGACTAATCTCTCACATATTTTTTCCAAATTAAAATTGCTATGACAATATCATCAATTGCTAGTA
CTGTTAACTGTATCCATGCCACTGTTGTTGCCTGGATGCTGCAAATAATTCATCTCCAGCTATATTCAGAACCATTACAT
TTTTCACTTAGGAAACATGCATGCAACAATGTATTTCACGCACAAATCCAAAGCCCATTAACAGCAGGACT
>chr3B_1
CTCACCTAGCTAAATACTC-TGCTTTGCCACCGGGCCAGAT---TTTTTTTTTGCACATTTATAATACAGTTGAGTGGGT
TAAAACTATTGCAAAACAACACACACTTTTATAATCTCTAAATACATATTTAGTTCGGTCTATATGTATATCCGAAGTAA
CTTATCAACGTCTCCTTGTGCATGGGACCCAAATACTGTACGTCCGAAATCACGAACAAATTGACATGTTCGCTAGAATT
CCACGACGGCATGCAAAATCACAAATAAGTATTGTCTTGTTGTATAAAGAGAAATTTCTTTGCGAAA-AAACTAATATAG
CTTGACATGTGGAACCTGGACTTACCCTCGTTGACACCACTAATATGTTAAATAGCTTCAAAATAATCAAACACATACTT
GTCTTCGTATTTCCAGCCTCTCCACACAAGCGACATTTCCCAACAAGTTCCTAAAGGAGCTCATGGTCTGTCCATTTTAG
TCAAACTGAACCTCAACAAATGGGGCAAATATAAGGACACCAAGTTTCAAGTAATTCATTGCAGTTTCAGTTCTC-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------AATTTAGGTGCAGCTCACACAACAACCTGT
AATTATATACCTATTACAGAATTATTTTGAAGGCATGTTAATACTTAGAAT-AAAAAATAACCCCACAGGAGGGTAACTA
ATTTATACCAAAGAGCATGCTAGCTCTCTCATGACCATAATGCTGCCATAACCCCACTGCAGCACGCCTTGCCCGCCATG
GGCTGCCGCACACCCCTGAGCGCGTCCTATACTTCAGTCTTCTTATTCGTAGTGTAGATTTCATTACATGTTTGTAAACA
AAATAAAGATTATTTGTATCAGCAATGTACATTTTCTTTAGGGCGATAGATATAAATTGATGTATTATCTA---------
------------ATACCTCCAACTATGAAACTGGAATAAGTAGAGTTGACATAAAATTGGAGATGGTTAACAATTAAGGA
AAA-AAC-CTAAAGAGGACCCCATGTGCACCTCTGATATCTATACTGACTCCACTCTGGTACATCATGAGTCGAAGCACA
TCGAATGAAGGGGTGTGGAGAAGAGGCGTCGAACGGGAGGCGAGAAGGGTGGTGGACCACCGAGCAAGGGTGCTCAATGG
CTCTGTCCCTGCCCAATGGTGGCCGCTGCTCGCAAGGGCA-TAAGGGAGTCATGAAACAACAGATGGTACAGCTCCTTTG
CAGTTCGATTCTTACTGTACAGGTACTGTAGCTGTTCAAAAAATTGAGACATGGTTATCTCAAGAAACTGGAAGGACTAA
GTGTAACAAGAATGTTCATATATTGAACTTGTATGAGCAATGAGAAAGGAAGGCTGAATATAGAGCTTGGAAGGTTGGTA
ATCTGCTTCCTACATAATAACAGGAAGGATAATCAGAAGAGGCTAAGGCAAGAGAGATGTACCTGGTTCTTGGAGACTCG
GAACAGTAATGTGCCATTCAAATAGACCAGATGTTTTTGAAAGAGCAACACTC--CACTATATATGGAGATGGACAACCC
GCCGTGGAGGAGAAATACTCTAGATGCACCTGGTTTTGAGACTTGGACTCATTTGCTAGATCTCTTAATCTTAGCCAAAT
TTAAAAGTATTTCAGAATGCAGTTAATTGTTTAAAGCAAAAGGCAACCTCATTCAAAGCAAATAGAGTATTTTAAAAAAT
ATGCTATGTTTCAGAGAGCATTCAGCAGCTACGTCATGTTTTCTTTCAGAATACACGTACTGCGAACAGCTTGCATCTGA
GTCAAGTACGCACATAAAAATATGCACAATACATGGAATTTTCAAACCCATAAACTACTTCATTTTAGTAGTTGTCTCAC
AAAGAATTAAATATTAAATTCATTTGTGGGGAAAAAATAACATCATATCATGAAGAACAGTACTGTATGC---GTCTTCA
TTGGTCCTGTTTGGCCCTGCTTCTTGAATCATTGTGTGGGTTACAAAAAATTGTAGTATACTTTGTACTCTCTTCATTGC
ATGAAAGAAAAGAAAAGACTAATCTCTCACATATTTTTTCCAAATTAAAATTGCTATGACAATATCATCAATTGCTAGTA
CTGTTAACTGTATCCATGCCACTGTTATTGCCTGGATGCTGCAAATAATTCATCTCCAGCTATATTCAGAACCATTACAT
TTTTCACTTAGGAAACATGCATGCAACAATGTATTTCACGCACAAATCCAAAGCCCATTAACAGTAGGACT
>chr4B_1
CTCACCTAGCTAAATACTC-TGCTTTGCCACCGGGCCAGATTTTTTTTTTTTTGCACATTTATAATACAGTTGAGTGGGT
TAAAACTATTGCAAGACAACACACACTTTTATAATATCTAAATACATATTTAGTTCGGTCCATATGTATATCTGAAGTAA
CTTATCAACGTCTCCTCAAGCAAGGGACCCAAATACTGTATGTCCGAAATCACGAACAAATTGACATGTTCGCTAGAATT
CCACGACGGCATGCAAAATCACAAATAAGTATTGTCTTGTTGTATAAAGAGAAATTTCTTTGCGAAA-AAACTGATATAG
CTTGACATGTGGAACCTGGACTTACCCTCGTTGACACCACTAATATGTTAAATAGCTTCACAATAATCAAACACATACTT
GTCTTCGTATTTCCAGCCTCTCCACACAAGCGACATTTCCCAACAAGTTCCTAAAGGAGCTCATGGTCTGTCCATTTTAG
TGAAACTGAACCTCAACAAATGGGGCAAATATAAAGACACCAAGTTTCAAGTAATTCATTGCAGTTTCAGTTCTCAGTTT
AGGTGCAGCTCACACAACAACCTGCAATTATATACCTATTGAAGAATTATTTTGAAGGCATGTTAATACTTAGAATAAAA
AATAACCCCACATGAGGGTAACTAATTTATACCAATGAGCATGCTAGCTCTCTCATGACCATAATGCTGCCATAACCCCA
CTGCAGCACGCCTTGCCCGCCATGGGCTGCCGCACACCCTTCAGTCTTCTTATTCGTAGTGTAGATTTCAGTCTCTCCAC
ACAAGCGACATTTCCCAACAAGTTCCTAAAGGAGCTCATGGTCTGTCCATTTTAGTGAAACTGAACCTCAACAAATGGGG
CAAATATAAAGACACCAAGTTTCAAGTAATTCATTGCAGTTTCAGTTCACAGTTTAGGTGCAGCTCACACAACAACCTGC
AATTATATACCTATTACAGAATTATTTTGAAGGCATGTTAATACTTAGAAT-AAAAAATAACCCCACATGAGGGTAACTA
ATTTATACCAATGAGCATGCTAGCTCTCTCATGACCATAATGCTGCCATAACCCCACTGCAGCACGCCTTGCCCGCCATG
GGCTGCCGCACACC-----------------CTTCAGTCTTCTTATTCGTAGTGTAGATTTCATTACATGTTTGTAAACT
AAATAAAGATTATTTGTATCAGCAAT------------------------------------------------------
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-----------------------------------------------------------------------
>chr6B_1
CTCACCTAGCTAAATACTC-TGCTTTGCCACCGGGCCAAA-----TTTTTTTTGCACATTTATAATACAGTTGAGTGGGT
TAAAACTATTGCAAAACAACACACACTTTTATAATCTCTAAATACATATTTAGTTCGGTCCATATGTATATCTGAAGTAA
TTTATCAACGTCTCCTCGTGCATAGGACCCAAATACTGTACGTCCGAAATCATGAA-AAATTGACATGTTCGCTAGAATT
CCACGACGGCATGCAAAATCACAAATAAGTATTATCTAGTTGTATAAAGAGAAATTTCTTTGCGAAA-AAAATGATATAG
CT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TGAAACTGAACCTCAACAAATGGGGAAAATATAAAGACACCAAGTTTCAAGTAATTCATTGCAGTTTCAGTTCTT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AGTTTAGGTGCAGCTCACACAACAACCTGC
AATTATATACCTATTACAGAATTATTTTGAAGGCATGTTAATATTTAGAAT-AAAAAATAACCCCACGGGAGGGTAACTA
ATTTATACCAATCAGCATGCTAGCTCTCTCATGACCATAATGCTGCCATAACCCCACTGCAGCACGCCTTGCCCACCATG
--------------------------------------------------------------------------------
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----------------------------------------------------------ACAATATCATCAATTGCTAGTA
TTGTTAACTGTATCCATGCCACTATTGTTGCATGGATGCTGCAAATAATTCATCTCCAGCTATATTCAGTACCATTACAT
TTTTCACTTAGGAAACATGCATGCAACAATGTATTTCACGCACAAATCCAAAGCCCATTACTAGTAGGACT
>chr2B_3
--CACCTAGCTAAATACTCGTGTTTTGCCACGGGACCAGAG-----TTTTTTTGCACATTTATAATGTAGTTGAGTGGGT
T-AAACTATTGCAAAACAACACACACTTTTATAATCTCTAAATACATATTTAGTTCGGTCCATATGTAGATCTCAAGTAA
CTTATCAACATCTCCTCGTGCATGGGACCCGAATACTGTACATCCAAAATCACGAACAAATTGACATGTTCGCTAGAGTT
CCACGACGGAATGCAAAATCACAAATAAGTATTGTCCTATTGTATAAAGAGAAATTTCTTTGTGAAA-AA-CTGATATCG
CTTGACATGTGGAACATGGACTTACCCTCATTGACACCACTAATATGTTAAATAGCTTCAAAATAATCAAAAACATACTT
GTCTTA-TATTTCCAGCCTCTCCACACAAGCGACATTTCCCAACAAGTTCCTAAACGAGCTCATGGTATGTCCATTTTAG
TGAAACTGAATCTCAACAAATGGGGCAAATATAAAGACACCAAGTTTTAAGTAATTCATTGCAGTTTCACTTCTCAGTTT
AGGTGCAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CTCACACAACAACCGGC
AATTATATACCTATTACAGAATTATTTTGAAGGCGTGTTAATACTTAGAAT-AAAAAATAACCCCACAGCAGGGTAACTA
ATTTATACCAATGAGCATGCT----CTCTCATGACCATAATGTTGCCATAA-----------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>chr7A_715
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-------------------------------------------------------ACTGCAGCACGCCTTGCTCGCCATG
--CTGCCGCACACCCCTAAGCGTGTCCTATACTTCAGTCTTCTTATTCGT--TGTAGATTTCATTACATGTT-GTAAACT
AAATAAAGATTATTTGCATCAGCAATGTACATTTTCTTTAGGGTGATAGATAGCAA-------------TATACATAGAT
AGCATTGCATTGATACCTCCAACTATGAAACTGGAATAACTAGAGTTGACATAAAATTGGAGATGGTTAACAATTAAGGA
AAA-AAAACTAAAAAGGACCCCATGTTCACCTTTGATATCTATACTGGCTGCACTCTGGTGTATCATGAGTCGAAGCACA
TCGAATGAAGGGGTGTGGAGAAGAGGGGCCGAATGGGAGGCGAGAAGGGTGGTGGACCACAGAGCAAGGACGCTCAACGG
CTGTGTCCCTGCCCAATGGTGGCAACTCATTGCAGGAGCA-TAAGGGAGACATGAAATAACAAAGCGTTCAGCTCCTTTG
CAGTTCGATTCTTACTGTATAGGTACTGTAGCTGTTCAAAAAATTGAGACATGGTTATCTCAAGAAACTGGAAGGAATAA
GTGTAACAAGCATGTTCATATATTGAACTTGTATGAGCAATGAGAAAGGAAGGCTGAATATAGAGCTTGGAAGGTTGGTA
ATCTGCTTGCTACATAATAACAGGAAGGATAATCAGAAGAGGCTAAGGCAAGAGAGATGTACCTGGTTCTTGGAGACTCG
GAACAGTAATGTGCCGCTCAAATAGACCAGATGTTGTTGAAAGAGCAACACTC--CATG----ATAGAGATGGACCACCC
GTCATGGAGGAAAAATACTCAAGATGCACCTGGTTTTGGGACTTGGACTCATTTGCTAGATCTCTTAATCTTAGCCAAAT
TTAAAAGTATTTCAGAATGCAGTCAATTGTTTAAAGAAAAAGGCAACCTCATTCAAAGTAAATAGAGTATTTTAAAAAAT
ATGCTATGTTTCAAAGGGCATTCAGCAGCTATATAATGTTTTCTTTCAGAATATATGTACTGCGAGTAGCTTGCATCTGA
GTCAAGTACGCACATAAAAATATGCACAATACATGGAATGAA-AAACCTATAAAGTACCTTATTTTAGTAGTTGTCTCAC
AAAGAATTAAATATTAAAGTCAGTTGTGGGAAAAAATGAACATCATATCCTAAAGAACAGTAGTGTACGCTATGTCTTCA
TTGGCCATGTTTGGCCCTGCTTCTTGAATCATTGTGTCGGTTCAAACAAATTGTAGTATACTTTTTACTATCTTGCTTGC
ATGAAAGAAAAGAAAAGATTAATCTCACACATATTTTTTCCAAATTAAAATTGCTATGACAATATCATCAATTGCTAGTA
CTTTTAACTGTATCCATGCCACTGTTGTTGCCTGGCTGCTGCAAATAATTTATCTCCAGCTATATTCGGAACCATTACAT
TTTTCATTTTGGAAACAAGCATGCAACAATGTATTTCACGCACAAATCCAAAGCACATTAGCAGTAG----
>chr2B_897
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GAA
AGCATTGCATTGATACCTCCAACTATGAAACTGGAATAAGTAGAGCTGACATAAAATTGGAGATGGTTAACAATTAAGGA
AAA-AAAACTAAAAAGGACCCCATGTGCACCTTTGATATCTATACTGGCTGCACTCTGGTATATCATGAGACGAAGCACA
TCGAACGAAGGGGTGTGGAGAAAAGGGGCCGAATGGGAGGCGAGAAGGGTGGTGGACCATAGAGCAAGGGCGCTCAACGG
TTGTGTCCCTGCCCAATG---GCAACTCCTTGCAGGAGCA-TAAGGGAGACATGAAACAACAGAGCGTTCAACCCCTTTG
CAGTTCGATTCTTACTGTATAGGTATTGTAGCTGTTCAAAAAATTGAGACATGGTTATCTCAAGAAACTGGAAGGAATAA
GCGTAACAAGCATGTTCATATATTGAACTTGTATGAGCAATGAGAAAGGAAGGTTGAATATAGAGCTTGGAAGGTTGGTA
ATCTGCTTGCTACATAATAACA---AGGATAATCAGAAGAGCCTAAGGCAAGAGAGATGTACCTGGTTCTTGGAGACTCG
GAACAGTAATGTGCCGCTCAAATAGACCAGATGTTGTTGAAAGAGCAACACTC--CATG----ATAGAGATGAACCACCC
GTCATGGAGAAAAAATACTCAAGATGCACCTGGTCTTGAGACTTGGACTCATTTGCTAGATCTCTTAATCTTAGCCAAAT
TTAAAAGTATTTCAGAATGCAGTCAATTGTTTAAAGCAAAAGGCAACCTCATTCAAAGTAAATAGAGTGTTTTAAAATAT
ATGCTATGTTTCAAAGGGCATACAGCAGATATGTAATGTTTTCTTTCAGAATATACGTACTGCGAGTAGCTTGCATCTGA
GTCAAGTACGCACATAAAAATATGCACAATACATGGAATGAA-AAACCTATAAAGTACCTTATTTTAGTAGTTGTCTCAC
AAAGAATTAAATATTGAAGTTAGTTGTGGGGAAAAATGAACATCATATCCTAAAGAACAGTAATGTACGCTATGTCTTCA
TTGGCCCTGTTTGGCCCTGCTTCTTGAATCATTGTGTGGGTTACAACAAATTGTAGTATACTTTGTACTATCTTCCTTGC
ATGAAAGAAAAGAAAAGATTAATCTCACACATATTTTTTCCAAATTAAAATTGCTATGACAATATCATCAATTGCTAGTA
CTTTTAACTGTATCCATGGCACTGTTGTTGCCTAGCTGCTGCAAATAATTTATCTCCAGCTATGTTCGGAACCATTACAT
TTTTCATTTTGGAAACATGCATGCAACAATGTATTTCACACACAAATCCAAATCACATTACCAGTAGCACT
>SNPs
--------------------------------S-----------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S-------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------S-----------
------------------S------------------------------------------------------------S
-S----S-------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-------------------------------------------------S------------------------------
---S----------------------------------------------------------------------------
-------------------------S-S----------------------------------------------------
--------------S-----------------------S-S---------------------------------------
------------------------S---------------------------------S---------------------
--------------------------------------------------------------------------------
--S-----------S------------------S---------------------------------------------S
------------S-S-----------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S------S------------------S-------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------S------------------
>forward_1127
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CTTGCCCGCCATA
GACTGCT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_2140
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TTGCGAATAGCTTGCATCTGA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
