>input_sequence_86193
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------------ATGGCAAAGTGCCTCGCCGTCGCGCTCCTCGTACTGGTGGCGCTCGCGTACTGCGACGGGAGGGAGCT
GAACCAGAAGGACCAGGCACTG------GCAACGGCACGCGGTGCCGGTGC---CGGTGGTGC---CGTCGACGAGTCCA
AGGTGCTGGGGCTGCCAGACCTGCCGGTCCTGGGAACCTTTACCGGTACCAGCACCATTACCGGCCCGCTGGTGGTGCTT
CCA---------GGGATCCCTGCTCA---CCCATGA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr2D_1_TraesCS2D01G461300
GAGCAACGAACTAGCGAGGGATGTTGCGACATGCGGGCTGTTTTGTTGGAACCGACAACGCTTTTTGCTACATAGGGGCG
GATAGACGCGGCGCACGAGCGATGCAACCATGTAGCCAGCGAGCTGCGCCGGTGAGAGCGACGCCATGGAGGCAGAGGCA
GAAAGCCGCGGGGGAACGATGAACAAGCAGGGGGATTTGCGTGACCGGCGTCGCTCGCGAGAAGGAAAGGGACGTGTGCG
AGGCAATCCTATGGTCCAGGGCGCACGTATCAGGCGGCTGCGCGGTGACCGGCCCAAATTTGGGCCGGTCGACCGGCGCC
TAGTACTGCCCTTTTAAGAAGGCTTTAAGTGGAATGGCATTAGTATATAGCCAGCACCCCGGCTATGTATTAGCCATGCT
CTAATTCGACAGCGGCACCTTGCCTTCTCGACGGCGATAGGACCCGTCGGCACGGATATCCGCCTCAGACTACCCACAGT
GGGAGTAACATAGGTAGTAACATCACACATATCTAGGTTAAATAGATGATGTGACATGTAATAAATGAAGAAAGAGATGG
TAGTGGTAACATAGCTAGTTACTACTAGTATGAGTAACATCACACATATCAAGGCAAGTTGTGTCTATAGTCTAATAAAT
GAAGTGCTCCATGTTACCACACATATGTTACTCCCCACTATAAAGGCCCATGTTACTAGTCTATGTTACTATCCATTGTG
GCTAGTCTCATTCCAATCCACC-----GCATTCCGCTATACCCATACATGCCTCTC---CCCTTGCCCGTGACCAGCCCG
CCTGTCGCACCTCTACC-------ATTCAATCCTCCTCTCCTGCGCCAACGACGCACGGCCACCCCGCCTCACCAC----
-CCCCGCCACCCCG-TCCAGCTCGCCTATAAGATTAAGAAGCAGCGT--AGACGATGCTAAGCCTAAGCTCACTCCAACA
CAGCCACC-------------------------------CAACA--CTA-----------------------------TC
ACAA------AGCCGCACAAGCTAG---ACTAT-CTCCT-----C---AGTAGTA-------------------------
----TTAGCAACATGGCAAAGTGCCTCGCCGTCGCGCTCCTCGTACTGGTGGCGCTCGCGTACTGCGACGGGAGGGAGCT
GAACCAGAAGGACCAGGCACTG------GCAACGGCACGCGGTGCCGGTGC---CGGTGGTGC---CGTCGACGAGTCCA
AGGTGCTGGGGCTGCCAGACCTGCCGGTCCTGGGAACCTTTACCGGTACCAGCACCATTACCGGCCCGCTGGTGGTGCTT
CCA---------GGGATCCCTGCTCA---CCCATGATCATCTCGAGTTCATGTGCT------------TACAAGATGAAG
CTGTCCTTGTGGCTTTAGACTT-TAGGCTCTAGCT-AACACCGTCCGGAGGAAAAACG---------CTGGCGTTTCA--
-----CTCGTGCCCATG----CTCCTTAATGGGCGTCTGTATCAACCATCCTGTCATCTG---TATTTCTTTGCAGTTCT
CTGTTCCAGTAATTTTCGTT-CCTTGATGTGCCACATGTATA-------AT-------CAACGTAATAAATACTACTCCT
TTGTCAGTGTGTTCGCCTCCTTGGATAGACATGTCGACAGGTTGCATCACCTACCTACAACTTTGTCACTCTAAGAGCAT
GGTTAATAATAGAGCCAACAATCGGCTACAATGAGTTGACAATTGGGGGTGAAGAGGATGAGAACGCACCCCCCCTCCCC
CGCGCACGCTCGGATTAAAAAAGGACACACTGCCGTCGCTGACGCGTGGGCCCACGGTTGTCCCGCATCATTAATAAAGA
TATGGGCGGTAGTTGGACGGCCGCCACGTGGGACGCGGCGAACACCGAGAGGATGCGCGGCCTGACGCCATTTGGGAATG
GGTCGACGCGTTGAGCTGTCACAAATGTCCGCGGCGACTCAAACGGACGGCGGCGAATGAAATGGGTCGCCGCGTTGGAA
TTGCTCTAAGTGTATAAAATTTGTCTTAAGTCAAACTTCTTATAGTTTGACCCAACTTATATTACAAAATATAAACATAT
ATAATAGAAAGTTATATAATATGCAAATTAATCCCATATGATGCATCTAAAGATATTAATTTAGTATTGTGAATGTTGAT
ATTTTTTCATACAAACTTTGTCAACTTTTACAAAATTTGACTTAAGACAACTCTTACATGCGGAGTAAAAAGAATCAAAG
GGAGTATATACATAGATAATAGAGCGCTGTCAAGGTGACCAACCCAGTAATAGTATCTCAACTTCATCGAATGAACAGTA
TAGA-ATAGTGTATGTGCACAAATCCAAAACAACAGTAATAAGGGGAAC
>chr2B_727
--------------------------------------------------------------------------------
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------CTCATTCCAATCCACCGACGTGCATTCCGCTATACCCATAC----CTCTC---CCCTTGCCCGTGACCAGCCCG
CCTGTCGCACCTCTACC-------ATTCAATCTTCCTCTCCTGCGCCAACGACGCACGGCCACCCCGCC-----AC----
-CCC---------G-TCCAGCTCGCCTA------TAAGAAGCAGCGT--AGACGATGCTAAGCCTAAGCTCACTCCAACA
CAGCCACC-------------------------------CAACA--CTA-----------------------------TC
ACAA------AGCCGCACAAGCTAG---ACTAT-CTCCT-----CAGTAGA---ACTACCGGA------------GCCTC
CCAGTTAGCAATATGGCAAAGTGCCTCGCCGTCGCGCTCCTCCTACTGGTGGCGCTCGCGTACTGCGACGGGAGGGAGCT
GAACCAGAAGGATCAGGCACTA------GCAACGGCACGCGGTGCCGGTGC---TGGTGGTGC---TGTCGACGAGTCCA
AAGCACTAGGGCTGCCAGACCTGCCGCTTGTCGGAACCGTTACCGGTACCAGCACCATTACCGGCCCGCTGGTGGTGCTT
CCT---------GGGATCCCTGCTCA---CCCATGATCATCTCGTGTTCATGTGC----TTACAAG-----A---TGAAG
CTCACCTTGTGGCTTTAGACTT-TAGGCTGTAGCT-AGCACCGTCCGGAGGAAAAATG---------CCGGTGTTTCC--
-----CTCATGTCCATG----CTCCTTAATGGGCGTCTGTATCAACCAGCCTGTCATCTG---TATTTCTTTGCAGTTCT
TTGTTCCAGTAGTTTTCGTT-CCTTGATGTGCCACATGTATC-------AT-------CAAAGTAATAAATACTACTCCT
TTGTCAGTGTGTTCGCCTTCTTGGATAGACATGTCAACAGGTTGCATCACCTACATACAACTTTGTTACTCTAATCATGA
AGTCCGGACTCTTATACAAGAATAAGTCAAGAGCCGTGGAATATGCTTGCACTTCAACGTTGTGC---------------
--------------------------------------------------------------------------------
--------------------------------------CGGACACCAACTGTTTCTTTTTA-------------------
--------------------------------------------------------------------------------
-----CTCAGTGTATAAGATTTGTTTTAATTCAAACTTCTTAAAGTTTGACCCAACTTATATTACAAAATATAAACATCT
ATAATAGAAAGATATATAATATGCAAATTAATCCCATATGATGCATCTAAAGATATTAATTTAGTATTGTGAATGTTGAT
ATTTTCTCATACAAACTTGGTCAACTTTTACGAAATTTGACTTAAGACAACTCTTATATGTGGAGTAAAAAGAATCAGAG
GAAGTATATACGTAGATAACAGAGCGCTGTCAAGGTGACCAATCCAGTAATAATATTTCAACTTCATCAAATGAACAGTA
TAGACATAGTGTATGTGCACAAATCCAAAACAACAGAAATAAGGGGAAC
>chr2D_743
--------------------------------------------------------------------------------
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---------------------------GCATTCCGCCATACACATGCATTCCTCTCTCTCCCTTGCCCGTGGCTGT--CG
GCTGTCGCACCTCTACCC------ATCCTATCCTAATCTCCTGCGCCAACGACGCACGGCCACCCCGCC-----GC----
-CCCCGCCACCCCG-TGCAGCGCGCCTA------TAAGAAGCAGCGT--AGACGATGCTAAGCCCAAGCTCACTCAAACA
CAGCCACT-------------------------------CAACA--CTA-----------------------------TC
ACAA------GGCCGCACAAGCTAGTAGACAAT-CTCCT-----C---AGAAGTATTAGCGGA------------GCCTC
CCAGCTAGCAATATGGCGAAGTGCCTCGCCGTCGCGCTCCTCCTACTGGTGGTGCTCGCGTCCTGCGACGGGAGGGAGCT
GAACCAGAAGGACCAGGCACTG------GCC---------------------GGTGCCGGTGGTGGCGTCGGCGAGTCGA
AGGTGTTGGGGTTGCCTGACCTGCCGCCTGTGGGAACCGTTACCGGTACCAGCACCACTAACGGCCCGCTGGTGGCGCTT
CCTGCCCTTCCCGGGATCCCTGCTCA---CCCATGATCACCTCTAGTTCATGTGCTGGCTTACAAG-----A---TGAAG
CTCACCTCGTGACTTTACACTTCTAGGCTCTAGCTTAACATCGCCCGGAAGGCAAACA---------CCGGCGTTTCG--
-----CTGATGTCCATGTTCCTTCCTTAATGGGCGTCTGTATCATCCATCCT--CGTCTG---TATTTCTTTTCAGTCCA
-TGTTCTAGTATTTTTCGTT-CCTTGATGTGCTACATGTATG-------ATGTATCATCAACGTAATAAATACT--TCTT
TCTTCAATGTGTTCGCCT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------
>chr2A_743
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------GCATTCCGCCATACACATGCATTCCTCTCTCTCCCTTGCCCGTGCCTGT--CG
CCTGTCGCACCTCTACCCTCCCCCATTCTATCCTAATCTCCTGCGCCAACGACGCACGGCCACCCCGCC-----AC----
-CCCCGCCACCCCG-TGCAACGCGCCTA------TAAGAAGCAGAGT--AGACGATGCTAATCCCAAGTTCACTCAAACA
CAGCCACG-------------------------------CAACA--CTA-----------------------------TC
ACTCAAACACAGCCGCACAAGCTAG---ACTTACCTCCT-----CAGTAGTA----TACCGGA------------GCCTC
CCAGCTAGCAATATGGCAAAGTGCATCGCCGTCGCGCTCCTGCTACTGGTGGCGCTCGCGTACTGCGACGGGAGGGAGCT
GAACCAGAAGGACCAGGCACTG------GCAACGGCACGCGGTGCCGGTGC---CGCCGGTGGCGGCGTTGGCGAGGAGA
AGATTTTGGGGTTGCCTGACCTGCCGCCTGTGGGAACCGTTACCGGTACCAGCACCACTAACGGCCCGCTGGTGGCGCTT
CCTGCCATTCCCGGGATCCCTGCTCA---CCCATGATCACCTCTAGTTCATGTTCTGGCTTACAAG-----A---TGAAG
CTCACCTCGTGACTTTAGACTTCAAGGCTGTAGCTTAACATCGCCCGGAAGGCAAACA---------CCGGCGTTTCG--
-----CTGATGTCCATGTTCCTT--TTAATGGGCGTCTGTATCAACTATCCT--CGTCTG---TAATTCTTTTCGGTCCG
CT-TTCCTGTATTTTTCGAT-CCTTGATGTGCTACATGTATA-------A------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr2A_788
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCCAG
CATGTCGCACCTCTACCTACTAG--TACCATCCTCCTCGTCTGCGCGGACGAGGCACGGGC-------------ACGGCC
ACCCCGCCACCCCCCTGCAACTCGCCTA------TAAGAAGCAGCGTACACACGATGCTAAGCCCAAGCTCACTCAAACA
CATCCAAA-------------------------------CAACA--CTA-----------------------------TC
-----------------------------------TCCT-----C---AGTA----CATCAGA------------GCCTC
CCGGTTAGCAATATGGCAAAGTGTCTCGCCGTCGCGCTCCTGCTACTGGTGGTGCTCGCGTCCTGCGAAGGGAGGGAGCT
GAATGAGAAGGTTGCAGCGACGCGTGTCGTA---------------------GGTGCGGGTGGCGGCGTCGGCGAGTCTA
AGGCGTTGGACTTGCCTGT------GCTCGGGGGAATCGGTACGGGAACCAGCACCATTACCGGCCCGCTGGTGGTGGTT
CCT---------GGGATCCCTGCTATTGGCCCATGATCATCTCTGGCTCATGTGCTGCCTAACAGG-----AAGCTAAAG
CTCGCCTTGTCGCTTTAGATT------CTGTAGGT-AGCACCGCCGTGAAGAAAAAAG---------CGGGCGTTTTG--
-----CTCATGTCCATG----TTCGGTACTGAGCGCCTGTATCAACTGTC-----ATCTG---TATCTATTTCCAGTTCA
-TGTTGTCGTATTTTTCGTT-TCTTGATGTGCTACATGTATC-------AT-------CAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr2B_788
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCCAG
CATGTTGCACCTCTACCTACTAG--TACTATCCTCCTCTCCTCCGCGGACGAGGCATGGGC-------------ACGGCC
ACCCCGCCACCCCG-TGCAACTCACCTA------TAAGAGGCAGAGT--ACACGATGCTAAGCCCAAGCTCACTCAAACA
CAGCCACA-------------------------------CAACA--CTA-----------------------------TC
-----------------------------------TCCT-----C---TGTAGTAGTACTACTATTACCAGAGCCGCCTC
CCAGTTAGCA--ATGGCAAAGTGTCTCGCCGTCGCGCTCCTGCTGCTGGTGGTGCTCGCGTCATGCGAAGGGAGGGAGCT
GAATGAGAAGGTTGCAGCGACGCGTGGCGCA---------------------GGTGCGGGTGGTGGCGTCGGCGAGTCTA
AGGCGTTGGACTTGCCTTT------GCTCGGGGGAACCGGTACGGGAACCAGCACCATTACCGGCCCGCTGGTGGTGCTT
CCT---------GGGATCCCTGCTATTGGCCCATGATCATCTCTGGCTCATGTGCTGGCTTACAAGG-----AGCTAAAG
CTCGCCTTGTCGCTTTAGATT------CTGTAGGT-AGCACCGCCGGGAAGGAAAAAG---------CGGACGTTTTG--
-----CTCATTTCCATG----TTCGGTACTGAGCGCCTGTATCAACTGTC-----ATCTGTACTATCTATTTCCAGTTCA
-TGTTCTCGTATTTTTCGTT-CCTTGATGTGCTACATGTACC-------AT-------CAA--TAAATAATAAT--TACT
ATGTTAGTGTGATCGTCTTCTTGGATGCAAATCTCAACTGGTTGCATCA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>chr2B_797
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----TCGCACCTCTA------CCCATTCTATCCTAATCTCCTGCGCCAACGACGCGCGGCC-------------AC----
-CCTCGCCAACCCG-TGCAGCGTGCCTA------TAAGAAGCAGCGT--AGACGATGCTAAGCCCAAGCTCACTCAAACA
CAGGCACAGCCACCCAACACTATCACAAAGCCGCACAAGCTAGA--CAA-----------------------------TC
-----------------------------------TCCT-----C---ATAAGTGCTAGCGGA------------GCCTC
CCAGCTAGCAATATGGCAAAGTGCCTCGCCGTCGCCCTCCTGCTGCTGCTGGTGCTCGCGTACTGCGACGGGAGGGAGCT
AAACCAGAAGGACCAGGCACTC------GCAACGGCACGCGGTGCCGGGGC---CGCCGGTGGTGGCGTCGGCGAGGAGA
AGATTTTGGGGTTGCCTGACCTGCCGCCTGTGGGAACCGTTACCGGTACCAGCACCACTAACGGCCCGCTGGTGGCGCTT
CCTGCCCTTCCCGGGATCCCTGCTCA---CCCATGATCACCTCTAGTTCATGTGCTGGCTTACAAG-----A---TGAAG
CTCACCTCGTGACTTTACACTTCTAGGCTCTAGCTTAACATCGCCCGGAAGGCCAACA---------CCGGCGTTTCG--
-----CTCATGTCCATGTTCCTTCCTTAATGGGCGTCTGTATCATCTATCCC--CGTCTG---TATTTCTTTTCAGTTCA
-TGTTCTAGTATTTTTCGTTTCCTTGATGTGCTACATGTATGATGTATCAT-------CAATGTAATAAATACT--TCTT
TTTTCAATGTGTTCGCCT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>chr2B_864
CCGCC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------ACCCG-TGCAGCTCGCCTA------TAAGAAGCAATGT--ACACGAAGCTAAGCCTAAGC-----------
----CACA-------------------------------CAACATACTATCACTCATACACAGCCACACAAGCTAGACTC
-----------------------------------TCCT-----C---AGTAGTATTATCAGA------------GACTC
CGAGCTAGCA--ATGGCAAAGTGCCTCGCTGTCGCGCTACTGCTACTGGTGGTGCTCGCGCACTGCGACGGGAGGGAGCT
GAATGAGAAGGACCGCGCACTT------GCAGCGATACGCGGTGCCGGTGC---TGG---------CGTCGGCGAGTCGA
AGATTTTGGGGCTGCCAGACTTGCCGGTTGTGGGAACCACTACCGGTACCAGTACCATTAACGGCCCGCTGGTGGTGATT
CCG---------GGGATCCCTGCTCA---CCCATGATCATCTCTAGTTCATGTGCTGGCTAACATACATACAAGCTTCAG
CCGAACTTGTGGCTTAAGACTT-----CTATAGTT-AGCACCACCCGGAAGAAAAAC---------ACCGGCTTTTCG--
-----CTCATGTTCATG----TTGCTTAATGAGCGTTGTATC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>chr2A_866
--------------------------------------------------------------------------------
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-----GCCACCCCG-TGCAGCTCGCCTA------TAAGATGCAACGT--ACACGA-GCTAAGCCTAAGCTCACTCAAACA
CAGCCACA-------------------------------CAACA--CTATCACTCAAACAAAGCCGCACAAGTTAGACTA
-----------------------------------TCTCCTTGCC---AGTACTATTACAAGA------------GCCTC
CCAGTTAACA--ATGACAAAGTGCCTCGCCGTCGCGCTTCTGCTACTGGTGGCGCTCGCGTACTGTGACGGCAGGGAGCT
GAACCAGAAGGATCAGGCACTA------GCAACGCCACGCGGTGCCGGTGC---CGGTGGTGC---CGTCGACGAGTCGA
AGGTGCTGGGGCTGCCAGACCTGCCGGTCGTCGGAACCGTTACCGGTACCAGCACCATTACCGGCCCGCTGGTGGTGCTT
CCA---------GGGATCCCTGCTCA---CCCATGATCATCTCGAGTTCATGTGCT------------TACAAGATGAAG
CTGTCCTTGTGGCTTCAGACTT-TAGGCTCTAGCT-AGCACCGTCCGGAGGAAAAACG---------CTGGCGTTTCG--
-----CTCATGCCCATG----CTCCTTAATGGGCGTCTGTATCAACCATCCTGTCATCTG---TATTTCTTTGCAGTTCT
TTGTTCCAGTAATTTTCGTT-CCTTGATGTGCCACATGTATA-------AT-------CAACGTAATAAAT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------
>chr2D_894
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------TAAAAGGCAGCGTACACGCGATGCTAAGCCAAAGCTCACTCAAACG
CAGCCACA-------------------------------CAACA--CCA-----------------------------TC
-----------------------------------TCCT-----C---AGTA----CATCAGA------------GCCTC
CCAGTTAGCAATATGGCAAAGTATCTCGCCGTCGCGCTCCTGCTACTGGTGGTGCTCGCGTACTGCGACGGGAGGGAGCT
GAACCAGAAGGACCAGGCACTT------GCAACGGCACGCGGTGCCGGTGC---TGCCGGTGGTGGCGTCCGCGAGGAGA
AGGTTTTGGGGTTGCCGGAGCTGCCGCTTGTGGGAACTGTTACAGGGACCAGTACCGTTACCGGCCCTGTGGTGGTGGTT
CCTGCCCTTCCCGGGATCCCGGCACA---CCCATGATCATCTCCACTTCATGTGCTGGCTTACAAG-----C---TGAAG
CTGAACTTGTAGGTTTATGACT------TCTAGGT-AGCACCGTCCGTAAGATAAACG---------CCG-------G--
-----CTCATTTCCATG----TTCCTTAATGAGCGTCTGTATCAACTATCCTATCGTCTG---TATTTTCTTTCAGTTCA
-TGTTCTAGTATTTTCCGTT-CCT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>chr2A_894
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------TAAAAGGCAGCGTACACACGATGCTAAGCCTAAGCTGACTCAAACG
CAGCCACA-------------------------------CAACA--CCA-----------------------------TC
-----------------------------------TCCT-----C---AGTA----CATCAGA------------GCCTC
CCAGTTAGCAATATGGCAAAGTATCTCGCCGTCGCGCTCCTGCTACTGGTGGTGCTCGCGTACTGCGACGGGAGGGAGCT
GAACCAGAAGGACCAGGCACTC------GCAACGGCACGCGGTGCTGGTGCGGGTGCTGGTGGTGGCGTCGGCGAGGAGA
AGATTTTGGGGTTGGCAGAGTTGCCGCTTGTGGGAACTGTTACCGGTACCAGCACAGTTACCGGTCCGGTGGTGGTGGTT
CCTGCCCTTCCCGGGATCCCTGCTCA---CCCATGATCATCACCAGTTCATATGCTGTCTTACAAG-----A---TGAAG
CTGAACTAGTGGGTTTATGACT------TCTAGCT-AGCACCGTCCGGAAGATAAACA---------CCG-------GTG
TTTCGCTCATTTTCACG----TTCCTTCATGAGCGTCTGTATCAACTATCCTATCGTCTG---TATTTTCTTTCAGTTCA
-TGTTCTAGTATTTTCCGTT-CCT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>chr2A_894
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TAAAAGGCAGCGTACACGCGATGCTAAGCCCAAGCTCACTCAAACG
AAGCCACA-------------------------------CAACA--CCA-----------------------------TC
-----------------------------------TCCT-----C---AGTAGCATTACCAGA------------GCCTC
CCAGTTAGCAATATGGCAAAGTGTCTCGCCGTCGCGCTCCTGCTGCTGGTGGTGCTCGCGTACTGCGACGGGAGGGAGCT
GAACCAGAAGGACCAGGCACTG------GCAACGGCACGCGGTGCCGGTGC---CGCCGGTGGTGGCGTCGGCGAAGAGA
AGGTTTTGGGGTTGCCAGAGTTGCCGCTTGTGGGAGCCGTTACAGGGACCAGTACCGTTACCGGTCCGGTGGTGGTGGTT
CCTGCCCTTCCCGGGATCCCGGCACA---CCCATGATCATCTCCACTTCATGTGCTGGCTTACAG---------CTGAAG
CTGAACTTGTAGTTTTATGACT------TCTAGGT-AGCACCGTCCGTAAGATAAACGTCGGCCTGACCGGCGTTTCG--
-----CTCATTTCCATG----TTCCTTAATGAGCGTCTGTATCAACTATCCTATCATCTG---TATTT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr2A_1457
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AATAAATACTACTCCT
TTCTCAGTGTGTTCGCCTCCTTGGATAGACATGTCGACAGGTTCCATCACCTACCTACAACTTTGTCACTCTAAGAGCAT
GGTTAATAATAGAGCCAACAATCGGCTATAATGAGTTGACAATCGGGTGAGAAGAGGATGAGGACGCACCCCCTCCCCT-
-GCGCACGCTCGGATTAAAAAAGGACACACTGCCGTCGCTGACGCGTGGGCCCACGGTCGTCCCGCATCATTAATAAAGA
TGTGGGCGGTAGTTGGACGGCCGCCACGTGGGACGCGGCGGACACCGAGAGGATGCGCGGCGTGACGCCATTTGAGAATG
GGTCGACGCGTTGAGCTGTCACAAATGTCCGCGGCGACCCAAACGGACGGCGGTGAATGAAATGGGTCGCCGCGTTGGAG
TTGCTCTAAGTGTATAAGATTTGTCTTAAGTCAAACTTCTTATAGTTTGACCCAACTTATATTACAAAATATAAACATCT
ATAATAGAAATTTATATAATATGCAGATTAATCCCATATGATGGATCTAAAGATATTAATTTAGTATTGTGAACGTTGAT
ATTTTTTCATACAAACTTTGTCAACTTTTACAAAATTTGACTTAAGACAACTCTTACATGCGGAGTAAAAAGAATCAAAG
GGAGTATATACATAGATAATAGAGCGCTGTCAAGGTGACCAACCCAGTAATAATATCTTAACTTCATCGAATGAATAGTA
TAGA-ATAGTGTATGTGCACAAATCCAAAACAACAGAAATAAGGGGAAC
>SNPs
SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-------------------------------------------S------------------------------
---------------------------------------------------------------------SSSSS------
----------------------------SSSSSS----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------S-----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S------------------S-S------------S----------S-S--SS
S---------------------------------------------------------S---------------------
-S--------------------------------------S--------------------S------------S-----
--------------------------------------S--------------S-------------------------S
-----------------S------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
------------------------------------S------------
>forward_47
---------------------------GACATGCGGGCTGTTTTGTT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_1319
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TTTACCGGTACCAGCACCAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_164
--------------------------------------------------------------------------------
----------------------------------------------------------------CATGGAGGCAGAGGCA
GAAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_1529
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GTGCCCATGCTCCTTAATGG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
