>input_sequence_86191
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----------ATGAAGCTTCTTCCTCTGTTTGTCCTTGCCATGGTAATGGTTAATGCTTGCGCCGTGTCTTCTCGCACCG
CGCCGAGGGACCATGTACTAGATGGAGTAGTGAAGATGGCAGCGACGGGAGAGGGGACGGCGATCGACAATCACCATGCG
ATACCAAGGACAGAGTATAGCAGCTGGAGCAGCCCTGGAAACATGCCCGGAAGTGGCCATGACATTGCTAGCGAAGAAGC
CAAACCATAA----------------------------------------------------------------------
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>chr2D_1_TraesCS2D01G047100
ACAAGTTCCCTCGGTTTATTCCAGCCAGTTCTCCCCTGTTTTTCTTTTATTTTTTAATTCTTTCACTCATTTTCTCC---
---------------------------------G-----------------------------------TTTTAATTTTT
ACTCTTTCTCTATTTTGATTTCATTTTCAAAAACATTGTTATCTATAAAAATCA--------------------------
-------------------------------TGAACATTTTTAAACTTATGGATTGTTTTTCAAATTAGTG--TTTTTCA
AATTCATGGATTGTTTTTCAAATTTTAAT-ATTTTTAAATTCATG-AATTTTTTTT-CAAATCCACAAACA-TTTTTTGA
TTTTAGCAATTGTCGATCGGCAGTTCATCAGTGGTCGATCACCAGGGAGGCATGACAGGCATCTATGATTCAGAAACCCG
GGCGCCTGCTGTCTACAATTAGATCTAGGTCAGGAGGTATATTTTGTACTAAAACATATAAAAAATTTAAAGAAAAGAGA
AAAGGGGGCTAGACCAGGTTATCACAACTCATGCTTTAAAGAT--TACGACCTAACTGAAATAACCTTTGACAGCTATGT
TCTTTCTCATAGTCAACTTTAGCCGAACTTATTTACCTACCATGCTCCCTGCAATAAA-GAAGAAAAAATATAACA--TG
TCATATGTCATACTGAATGATAGCTGAAAAATTGAGATAAAATAATGCCCTTCTCCACTAAATTACAGCTATCCAGTAGT
GAGGCATCCTTGCATATTTTCACACTTATCTCTCTCTGGAGCATTATTCCACAATATTAAAATGTTTTGCACCGAGAAAG
TTACTGAGTTGGACAGAAAATGCCCTTGCCCCACCAGAAATTGCCTCACCTAGGTGGAGAGCCC------------ACAA
TATAG------------------------------------------------TAAAGAGGCACGGCCAATTGTCAAATG
GAAATCAACATAGAGAAACTCCATGTGGTTCAGAAAGCTCTATTAACCTATCTCTCTGCCTATAAATAACGTATCACCAG
ATCTCGT-----GTCTCGACCCAAAATCATTATAGGAAAACCAGCAAGCC---A---TAACACTTCTATGGTTCCCCGTC
CAGCTGCACGATGAAGCTTCTTCCTCTGTTTGTCCTTGCCATGGTAATGGTTAATGCTTGCGCCGTGTCTTCTCGCACCG
CGCCGAGGGACCATGTACTAGATGGAGTAGTGAAGATGGCAGCGACGGGAGAGGGGACGGCGATCGACAATCACCATGCG
ATACCAAGGACAGAGTATAGCAGCTGGAGCAGCCCTGGAAACATGCCCGGAAGTGGCCATGACATTGCTAGCGAAGAAGC
CAAACCATAAGC--AGCCTGATATATGCATGCCTTTGTACGTAGC-----------------------------------
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----------------------------------AGACTTTGCATGCTAGGGTACGTATACATACTCTTTTGAGTCATAT
ATA-----------------------------------------------------------------------------
---TAGTAGTAGTTCCATGTCGTGGGTTCCTCGTTGTGCTACCTAT--A-------------------------------
----------------------------------------------------TGTAAATTAAGGGTGAGCCGGATCACGT
CTATATA--TTTACAGATGTTCTGTTTATATTGAATAAAGCAACATTTCTCTATATTCATTGATAGTTTACAGTATGAGT
TCTTGA------------------------------------GTACTACCAAGCTGATGAATCAGTCCGAAATATTAG--
CTTTATTTATAC------TAGAAGAACCATAAGAATATCAGCGAGGTACACAGTGAATCCTTTGTTATATGAAT-AAAAA
ATAAACCATTTACTTGAAGT-----------T-----------GATATTGCTATGGATTCATAAGATTGATGTTGAAGGA
ACAATATAATTTTGCTAATATATGGTCTAATAAATAACCGGGAAACCATGAAACAATCAAGTGTTGATTTGAGAAAATAA
AAGAAATATACAACCATAACTATATGTAGACATGAAGGGAAACATGCATGTGCATACCGCATGCAATTGTTAACGAGAGT
CTCGCCTGTTGTCTACTGGCATGATACAATTGCACACTAGTTAAGATCTTTAATTGTTGAAATAAAGTTTTCAGCGAATA
TTTCACTTTGATGAAAA-CCGTCCTCTCTCCTCAAA-GGGCATGCATTCTTTATGTAAGCTGAAACCACACCAATTTGTT
TATCTAAGCTAAAACCAAACCAATTTGTTTATATAACTTTCATATGATAC-AATTTGATTGACAACAACTTCACTGAAAG
CACTTTACATAAATCACTTGATAAAGTGCAATATCTCAATCAGAGAATATATAAATTTCATAT--GATACAATTTCATTG
AAAC-AACTTACATAAATAGCTTCATAAAGGA-TCAAAATGGGTTTCAAGTCATTAGTGTATATATAGGTGCCCACCCTG
TGGGATATTGGATTAAAGAGATGTTGTCCTTTGGTTCAGTAT
>chr2D_1
ACAAGTTCCCTCGGTTTATTCCAGCCAGTTCTCCCCTGTTTTTCTTTTCTTTTTTAATTCTTTTACTTATTTTCTCC---
---------------------------------GTTTGTTTTTGTTTTTCTTTCATCTTTGTGTTGTTTTTTTTATTTTT
ACTCTTTCTCTTTTTTGATTTAATTTTCAAAAACATTTTTATCTATAAAAATCATGATTTG--TTTTTCAAAATTTGGGG
AAATGTTTTGAATTTTCAAATTT--------TGAACATTTTTAAACTTATGGATTGTTTCCCAAATTAGTG--TTTTTCA
AATTCATGGATTGTTTTTCAAATTTTGAACATTTTTAAATTCATG-AAAAAAA--T-CAAATCCACAAACA-TTTTTTGA
TTTTAGCAATTGTCGATCGGCAGTTCATCCACGGTCGATCACCAGGGAGGCACGACAGGCATCTATGATTCAGAAACCCA
TGTGCATGCTGTCTACAATTAGTGCTAGGCCAGGAGGTATATTTTGTACTAAAACATATAAAAAATTTAAAGAAAAGAGA
AAAGGGGGCTAGACCAGGTTATCACAACTCATGCTTTAAAGAT--TACCACCTAACTGAAATCACCTTTGACAGCTATGT
TCTTTCTCATAGTCAACTTTAGCCAAACTTATT-ACCTGCCATGCTCCCGCAAAAAAAAA--------------------
----ATGTCATACTGAATGATAGCTGAAAAATTGAGATATAATAATGCCCTTCTCCACTAAATTACAGCTATCCAGTAGT
GAGGCATCCTTGCATATTTTCACACTTATCTCTCTCTGGAGCATTATTCCACAATATTAAAATGTTTTGCACCGACAAAG
TTACTGAGTTGGACAGAAAATGCCCTTGCCCCACCAGAAATTGCCTCACGTAGGTGGAGAGCCC------------ACAA
GATAG------------------------------------------------TAAAGAGGCACTGCCAATTGTCAAATT
GAAATCAACATAGAGAAATTCCATGTTGTTCAGAAAGCTCTATTAACCGATCTCTGTGCCTATAAATAACACATCACCAG
ACCTCGT-----GTCTCGACCCAAAATCATTATAGGAAAACCAGCAAGCC---A---TAACACTTCTAGGGTTTCCCGTC
CAGCTGCACGATGAAGCTTCTTCCTCTGTTTGTCCTTGCCATGGTAATGGTTAATGCTTGCGCCGTGTCTTCTCGCACCG
CGCCGAGGGACCATGTACTAGATGGAGTAGTGAAGATGGCAGC-------------------------------------
------------------------TGGAGCAGTCCTGGAAACATGCCCGGAAGTGGCCATGACATTGCTAGCGAAGAAGC
CAAGCCATAAGC--AGCCTGATATATGCATGCCTTTGTACGTACACTAGTAGAAAAGGAGGCTTTTGTCCCGGTTGATAA
GGGCCTTTAGTCCCGGTTTTTGAACCGGGACTAAAGGGCCGTTACTAATGCCTCCCCACTTTAATCCCGGTTCTTACACG
AACCGGGACTAAAGGCTGTCCACGTGGACGCGGCCTGGAGCTCCACCTTTAGTCCTGGTTGGTGTTACCAACCGGGACTA
AAGGAAATTTTATGATTTTTTTTTTTGAAATTTTTTTTGCGATTTTTTTTTATTTTCAAATTTTTGAATTATTTTAACCT
CTAATCTCTAATCACCACCCCTCATCACTGCTCAATTTATCCTCTAATCTCTAATCACCCCTCATCATTCCAAATCATCT
AACTTCCCGGACGGTCACCCATCCTCTCACTACTCCAGCCTGAGCACGGTTAACTTCCGGGTTCTATTCTCCCTCGTTTC
CAAGTCTGCACTTGTTGTTTTCCTGACAATAGTAAGATGTCAATTCTATTAACCCTCAGGAATTTAGCTTGAGCATGAAG
TGACACATTTCACTGTTTGGGTTTGAAACTATTGTTTTAAAAAACAATAATTATTTAGTAACACTAATATTTCTGGAATA
ATTAGTTTGACCATTGTTTGACCATTGTTTGACCACAGTTTGACCAGATTTGACCAAAATTCAAAAAAACTGAAATAATT
ATTTAGTAACACTAATATTCTAGAATAATTAGTTTGACCATTGTTTGACCACAATTTGAAATTTTTTGAATTTTTTTGCC
TCTCCAGATCTTAAAAGCCCCGTATCTTTTTTTCTGTTAGGTTTTTGAGGATTTTGAAAATAAAAAACTTTTCGAGTAGA
TGATTTTTCATATAAAAAAAATTTTCATCCGAGTTCGTATGCAAAAGTTATGCCCATTTTAAGAAATTCCAGAGAGATTT
TGCAAATAAAGTCGAGATTCATATTTGTTAATTTTCCCAACAACTAGACCACATATCACATGGGAAACTTATTTTATTTT
ATTTTATTGACATTTCCATCATTTTCTTTTGTTTTTTCTAAAACTGAAAAGGCGGTCCACGGGGGAGGGGGGGTAGAGTT
TGATGGGCCCTTTAATAGCAAAAAGAATTTTCATAAAGAATGTTTTTGTTAGACATTTTAATAGCAAAAAGATTATCATA
AATATTTTTTTGTTAGAAACTAAAATAACAAAATCTGTTTTTGAATAGAATCATAAAACACAGTAATAACAAAATCAAAG
AATTCAAATTTGAAAACTAATGGCACTAACAGAAAGTTTATAATTTTTGTGACCTAAAAGCAAAAAGAATTAAAAAATAA
AATTTAATAAAATAAATAAAAATAGCAACAGTAAGTATTTTGTTGTAAGTAGAAACAAAATAAAATAAATAAAGCAACAA
AGAAAAAAAAGTGCCATCTACTGGGCCACCACGGCCTGAATACGACTAGAAACCCAACCATGGGCCAGGATTCAGGCCCG
CAGGTGGCCCAGTAGGCCCACAGGCACACAGTGTACGGTTAGGCCCGAAAGCCTGCAATTGAGAGGAGCTCGAGAGGGTG
GGCGCAACAGTGCTTATAAACCACTCTCGAGCTCCCTCAACTAGCGAGGTGGGACTAAACTTTGGCCGCGACGCGGGCAG
CACATGTCCTTTAGTCCCGGTTGGTGGCACCAACCGGGATTAAAGGACTAACCTTTAGTACCGGTTGGTGCCACCAACCG
GTACTAATGGGCATCGCACCCTTTAGTCCCGGTTCGTGGCACCAACCGGGACTAAAGGGCCCAGGTGAACCGGGACTAAT
GCCTTAGCCGCATGAACCGGGACCAATGCTCGCATTAGTCCCGGTTCGTGACTGAACCGGGACTAATGTGAATATTGCCC
TGTGACGAAAGTCCTGTTTTGTACTAGTGGTAGAAGACTTTGCATGCTAGGGTACGTATACATACTCTTTTGAGTCATAT
ATA-----------------------------------------------------------------------------
---TAGTAGTAGTTCCATGTCGTGGGTTCCTCATTGTGCTACCTAT--A-------------------------------
----------------------------------------------------TGTAAATTATGGGTGAGCCGGATAACGT
CTATATA--TTTACAAATGTTCTGTTTATATTGAATAAAGCAACATTTCTCTATATTCATTGATAGTTTACAGTATGAGC
TCTTTA------------------------------------GTACTACCAAGCTGATGAATCAGTCCGAAATATTAG--
CTTTATTCATAC------TAGAAGAACCATAAGAATATCAGTGAGGTACACAGTGAATCCTTTGTTATATGAAT-AAAAA
ATAAACCATTTACTTGAAGT-----------T-----------GATATTACTATGGATTCATAAGATTGATGTTGAAGGA
ACAATATAATTTTGCTAATATATGGTCTAATAAATAACCGGGAAACCATGAAACAATCAAGTGTTGATTTGAGAAAATAA
AAGAAATATACAACCATAACTATCTGTAGACATGAAGGGAAACATGCATGTGCACACCGCATGCAATTGTTAACGAGAGT
CTCGCCTGTTGTCTACTGGCATGATACAATTGCACACTAGTTAAGATCTTTAATTTTTGAAATAAAGTTTTCAGCGAATA
TTTCACTTTGATGAAAAACCGTCTTTTCTCCTCAAA-GGGCATGCATTGTTTATGTAAGCTGAAACCACACCAATTTGTT
TATCTAAGCTAAAACCAAACCAATTGGTTTATATAACTTTCATATGATAC-AATTTGATTGAAAACAACTTCACTGAAAG
CACTTTACAGAAATCACTTGATAAAGTGCAATATCTCAATCAGAGAATATATAAATTTCATAT--CATACAATTTCATTG
AAAC-AACTTACATAAATAGCTTCATAAAGGA-TCGAAATGGGTTTCAAGTCATTAGTGTATATATAGGTGCCCACCCCG
TGGGATATTGGATTAAAGAGATGTTGTCCTTTGGTTCAGTAT
>chr2B_1
ACAAGTTCCCTCGGTTTATTCCAGCCAGTTCTCCCTTATTTTTCTTTTATTTTTCAATTCTTTTACTCATTTTCTCCATT
TGTTTTTGTATTTCTTTCATCTTTGTGTTGTTTG-----------------------------------TTTTTGTTTTT
TCTCTTTCTCTTTTTTGATATCATTTTCAAAAACATTGTTATCTATAAAAAAATCTTG-ATTTTTTTTCAAAATTTGGTG
AAATGTTTTGAATTTTCAAATTTTCAAATTTTGAACATTTTTAAACTCATGGATTGTTTTTCAAAATAGT----------
------------------------------TTTTTTAAATTCATG-AAAAAAA--TACAAATCCACAAACA-TTTTTTGA
TTTTAGCAAGTGTCGATCGGCAGTTCATCCGTGGTCGATCACCAGCGAGGCACGACAGGCATCTATGATTCAGAAACCCG
GGCGCCTACTGTCTACAATTAGATCTAGGTCAGGAGGTATATTTTGTACTAAAA-ATATAAAAAAATTGAAGAAAAGAGA
AAAGGGGGCTAGACCAGGTTATCACAACTCATGCTTTAAAGATCTTACCACCTAACTAAAATCACCTTTGACAGCTATGT
TCTTTCTCATAGTCAACTTTAGCCAAACTTATG-ACCTGCCATGCTCCCTGCAATGAA-GAGGAAAAAATATAACATGTG
TCATATGTCATACTGAATGATAGCTGAAAAATTGAGATATAATAATGCCCTTCTCCATTAAATTACAGCTATCCAGTAGT
GAGGCATCCTTGCATATTTTCACACTTATCTCTATCTGGAGCATTATTCGACAATACTAAAATGTTTTGCACCGAGAAAG
TTACTGAGTTGGAGAGAAAATGCCCTTGCCCCACCAGAAATTGTCTCGCCTAGGTGGAGAGTCC------------ACAA
GATAG------------------------------------------------TAAAGAGGCACTGCCAATTGTCGAATG
GAAATCAACATAGAGAAACTT----------AGAAAGCTCTATTAACCTATCTCTCTGCCTATAAATAACGCATCACCAG
ATCTCGT-----GTCTCGACCCAAAATCATTATAGGAAAACCAGCAAGCAATTA---TAACACTTCTAGGGTTTACCGTC
CAGCTGCACGATGAAGCTTCTTCCTCTGTTTGTCCTTGCCATGGTAGTGGTTAATGCTTGCACCGTGTCTTCTCGCACGG
CACCGAGAGAGCATGTACTAGATCGAGTAGTGAAGATGGCAGCGACGGGAGAGGGGACGACGATCGACAATCACCATGCG
ATACCGAGGACAGAGTATAGCAGCTGGAGCAGCCCTGGAAACATGCCCGGAAGTGGCCATGACATTGCTAGCGAAGAAGC
CAAGCCATAAGC--AGCCTGATATATGCATGCCTTTGTACGTAGC-----------------------------------
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----------------------------------AGACTTTGCATGCCAGGGTACGTATACATACTCTTTTGAGTCATAT
ATA-----------------------------------------------------------------------------
---TAGTAGTAGTTCCATGTCGTGGGTTCCTCGTTGTGCTACCTAT--A-------------------------------
----------------------------------------------------TGTAAATTTTGGGTGAGCCGGATCATGT
CTATATATTTTTACAGATGTTCTGTTTATATTGAATAAAGCAACATTTCTCTATATTCATTGATAGTTTACAGTATGAGC
TCTTGA------------------------------------GTACTACCAAGCAGATGAATCAGTCCGAAATATTAG--
CTTTATCTATAC------TAGAAGAACCATAAGAATATCAGCGAGGTACACAGTGAATCCTTTGTTATATGAAT-AAAAA
ATAAACCATTTACTTGAAGT-----------T-----------GATATTGCTATGGACTCATAAGATTGATGTTGAAGGA
ACAATATAATTTTGCTAATATATGGTCTAATAAATAACCGGGAAACCATGAAACAATCAAGTGTTGATTTGACAAAATAA
AAGAAATATATAACCATAACTATATGTAGACATGAAGGGAAACATGCATGTGCATACCGCATGCAATTGTTAATGAGAGT
CTGGCCTGTTGTCTACTGGCATGATACAATTGCACACTAGTTAAGATCTTTAGTTGTTGAAATAAAGTTTTTGGCGAACA
TTTCACTTTGATGAAAGACAGTCCTCTCTCCTCAAA-GGGCATGCATTG-TTATGTAAGCTGAAACTACACCAATTTGTT
TATCTAAGCTAAAACCAAACCAATTTGTTTATATAACTTTCATATGATAC-AATTTGATTGAAAACAACTTCACTGAAAG
CACTTTACATAAATTACTTGATAAAGTACAATATCTCAATCATAGAATATA-----------------------------
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>chr2A_1
ACAAGTTCCCTCCGTTTATTCCAGCAAGTTCTCCCCTG--TTTTTTTTATTTTTTAATTCTTTTACTTATTTTCTC----
----------------------------TGTTTG-----------------------------------TTTTAATTTTT
ACTCTTTCTCTTTTTTGATTTCATTTTGAAAAACATTGTTATCTATAAAAATCATGAATATTTGTTTTCAAAATCTGGGG
AAATGTTTTGAATTAACAAT--------TTTTAAACATTTTTAAACTTATGGATTGTTTTTCAAATTAGATTTTTTTTCA
AATTCATGGATTGTCTTTCAAAGTTTAAACATTTTTAAATTCATGAAAAAAAA--T-CAAATCCACAAACA-TTTTTTGA
TTTTA---------------------------------------------------------------------------
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ATCTCGT-----GTCTCGACCCAAAATCATTATAGGAAAACCAGCAAGCC---A---TAACACTTCTACGGTTCCCCGTC
CAGCTGCACGATGAAGCTTCTTCCTCTGTTTGTCCTTGCCATGGTAATGCTTAATGCTTGCGCCGTGTCTTCTCGCACCG
CGCCGAGGGACCATGTACTAGATGGAGTAGTGAAGATGGCAGCGACGGGAGAGGGGACGGTGATCGACAATCACCATGCG
ATACCGAGGACAGAGTATAGCAGCTGGAGCAGCCCTGGAAACATGCCCGGAAGTGGCCATGGCATTGCTAGCGAAGAAGC
CAAGCCATAAGC--AGCCTGATATATGCATGCCTTTGTACGTAGC-----------------------------------
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----------------------------------AGACTTTGCATGCTAGGGTACGTATACATACTCTTTTGAGTCATAT
GTA-----------------------------------------------------------------------------
---TAGTAGTAGTTCCATGTCGTGGGTTCCTAGTTGTGCTACCTAT--A-------------------------------
----------------------------------------------------TGTAAATTAAGGGCGAGCCGGATCACGT
CTATATA--TTTACAGATGTTCTGTTTATATTGAATAAAGCAACATTTCTCTATATTCATTGATAGTTTACGGTATGAGC
TCTTGA------------------------------------GTACTACCAAGCTGATGAATCAGTCCGAAATATTAG--
CTTTCTTTATAC------TAGAAGAACCATAAGAATATCAGGGAGGTACACAGTGAATCCTTTGTTATATGAATAAAAAA
ATAAACCATTTACTTGAAGT-----------T-----------GATATTGCTATGGATTCATTAGATTAATGTTGAAGGA
-----ATAATTTTGCTAATATATGGTCTAATAAATAACCGGGAAACCATGAAACAATCAAGTGTTGATTTGAGAAAATAA
AAGAAATATACAACCATAACTATATGTAGACATGAAGGGAAACATGCATGTGCATACCGCATGCAATTGTTAACGAGAGT
CTCGCCTGTTGTCTACTGGCATGATACAATTGCACACTAGTTAAGATCTTTAATTGTTGAAATAAAGTTTTCAGCGAATA
TTTCACTTTGATGAAAAGCCGTCCTCTCTCCTCAAA-GGGCATGCATTGTTTGTGTAAGCTGAAACCACACCAATTTGTT
TACCTAAGCTAAAACCAAACCAATTTGTTTATATAACTTTCATATGATAC-AATTTGATTGAAAACAACTTCAGTGAAAG
CACTTTACATAAATCACTTGATAGAGTGCAATA--------------------------ATAT--GATACAATTTCATTG
AAAC-AACTTACATAAATAGCTTCATAAAGGA-TCGGAATGAGTTTCAAGTCATTAGTGTACATATAGGTGCCCACCCTG
TGGGATACTGGATTAAAGAGATGTTGTCCTTTGGTTCAGTAT
>chr2B_137
AAATTC--------------------------------------------------------------------------
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----------------------T--------TGAACATTTTCAAATCAATGGATTGTTTTCCATTTTAGTG--TTTTTTC
AATAAGCGATCTTTTTGAATTCATGAACTTTAA-AAAAATTCATG-GACATTTTTT-CAAATCCTCAGTCA-TTTTCTGA
TTTTAGATCGTGTTGATCGGTTGTTCATCCGCGGTGGATCACCATGGCGGCACGACAGGCACCTATGATTCAGAATCCCG
GGTGCCTGATGTCTACAATTGGATCCAGGTTGGGAGGTATATTTTGTATTAAAACATATCAAAGGTTGAAAGGAAAGAGA
AAAGGAGGCTAAACCAGGTT-TCACAACTCATGCTTTAAAGATCTTACCACCTAACTGAAATCTCATTTGACAGCTATGT
TCTTTCTCATAGTCAACTTTAGCCAAACTTATT-ACCTGCCATGCTCCCTGAAAAAAAAGAAGAG---ATATAACA--TG
TCATATGTCATACTGAAAGATAGCTGAAAAAGCAAGATATATTAATGCCCTTGTCCACTAAATTGTAGCTATCCAATAGT
AAGGCATCCTTGCATATTTTCACACTTATCTCTATCTGGAGCATTATTCCACAATACTAAAATGTTTTGCACGTAGAAAG
TTACTGAGGTGGACAGAAAATGCGCTTAGCCCACCAGAAATTGCCTCACCTAGGTGGAGAGAACACTATAAACAGAACAA
GATAA-----------------------------------------------TTAAAGAGGCACTGCCAACTGTCAAATG
GAAATCAACATAGAGAAACTCCATGTGGTTCAGAAAGCTCTATTAATCTATCTCTCTGCCTATAAGTAACGCATAATCAG
ATCTCGT-----GCCTCAACCCAAAATC-TTATAGGAAAACCAGTAAGCC---ATTATACCACTTCTATGGTTTCCCTTC
CAGCTGCACGATGAAGCTTCTTCCTCTGTTTGTCCTTGCCATGGTAATGGTTAACGCTTGTGCCGTGTCTTCTCGCACGG
CGCCGAGAGACCATGTACTAGATGGAGTAGTGAAGACGGCAGCGACAGGGGAGGGGATGGCGATCGACAATCATCATGCT
ATACCGAGGACGGAGTATAGCAGCTGGAGCAGCCCTGGAAATATGCCCGGAAGTGGCCATGACATTGCTAGCGAAGAAGC
CAAGCCATGAC--CAGTCTGATATATGCATGCCGTTGTACGTAGT-----------------------------------
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----------------------------------AGACTTTGCATGCTAGGGTACGTATACGTACTCTTTTGATATATGT
ACGTATACGTACTCTTTGCAGTCTGATATTCTAGGGTACGTAGCAGACTTTGCATGCTAGGGTGTATATATATATAGTAG
TAGTAGTAGTAGTTGCATGTCGTAGGTTGCTAGTTGTGCTACTTAT--A-------------------------------
----------------------------------------------------TGTAAATTAAGGGTGAGCCGGATCACGT
CTATATA--TTTACAGATGTTCTGTTTATATTGAATAAAACAACGTTT-TCCATATTCATTGATAGTTTATAGTATGAGC
TTTTGAAGTAGATTTCATCTGGATTTAGATGTTAAATCTTGAGTACTACCAA-GATATGAATCAGTCAGAAATATTATAG
CTTTATCTTTATTAGAATTAGAAGAACCATAAGAATATCAGTGAGGTACACATCGAATCCTTCATTAGAAC------AAA
ATAAACCATTTACTTGAAGT-----------TTAATAGATGATGATATTGATGTGTACTCATAAGATTGATGTTGAAGGA
ACCATATAATTTTGCTAACATATAGTCTAATAAATAACCAGGAAACCATGAAACAATCAAGTGTTGATGTGAGAAAATAA
AAGAAATATATAACCATAACTATGTGTAGACTTGATGGGAAACATGCATGTGCATACGTCATGCAATTGTTAACGAGAGT
CTCGCCTGTTGTCTGCTGGCATAATACAATTGAACACAAGTTAAGATCTTTAATTCTTGAATTAAAATTTTCAGAGAATA
TTTCACTCTGGTGAAAAACATTCCTCTCTCCTCAAA-GGGCATGCATTGTTTATGTAAGCTGAAACCACACCAATTTGTT
TACCTAAGCTGAAACCACACCAACTTGTTTGTATAACTTTCATATGATAA-AATTTCATTGAAAACAACTT---------
------ACATAAGTCACTTGATAAAGTAGAATATCTCAATCAGTGAATATATAAATTCATATGACGATGCAATTCCATTC
AAAATAACTTACATAAACAGCTTCATAAAGTA-CCGACATGGGTTTTAAGTCAT-AGTGTACAGGT--GCCGCCGTGT--
--GGATATTAGAATAATGAGTTGTTGTCCTCCGGTTCAGT--
>chr2A_137
AAATTC--------------------------------------------------------------------------
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------------------------------TTGAACATTTTTAAATTCATTACTCTTTTTTCAAATTAGTG--GTTTTTA
AATTT-CCATCCTTTTGAATTCGCACACTTTTTTAAAAATTCATG-AACATTTTTT-CAA-TCCACAAACATTGTTTTTA
TTTTAGCAGGTGTCGATCAACCGTTCATCCGTGGTCGATCACCATGGCGGCAGGACATGCACCAACGATTCATAAT-CCG
AGTCCCTAATATCTACAGTTAGATCTAGGCCAGGAGGTATATTTTGTACTAAATCATATATAAGATTTAAAGAAAAAAGA
AAAGGAGGCTAGACCAGGTTATCACAAGTCATGCTTTAAAGATCTTACCACCTAACTAAAATCACCTTTGACAGCTATGT
TCTTTCTCATAGTCAACTTTAGCCAAACTTATT-ACCTGCCATGCTCCTTGCAATAAA-GAAGAAAAAATATAACA--TG
TCATATGTCATACTGAAAGATAGCTGAAAATTTGAGATATAATAATGGCCTTCTCCACTAAATTACCGCTATCCAGTAGT
GAGGCATCCTTGCATATTTTCACACTTATCTCTATCTGGAGCATTATTCCACAATACTAAAATGTTTTGCACCCAGAAAG
TTACTGAGTTGGACAGAAAATGTGCTTACCCCACCAGAAATTGCATCACCTAAGTGGAGAGCCC------------ACAA
GATAATTAAAGAGGCACTGCCTATTGTCAATTGGAAATCTATTGTTCATTGTTTAAAGAGGCACTGCCTATTGTCAATTG
GAAATCAACATAGAGAAACTCCATGTGGTTCAGAAAGCTCTATTATTCTATCTCTCTGCCTATAAATAACGCATAACCAG
ATCTCGT-----GCCTCAACCCAAAATCATTATAGGAAAACCAGTAAGCC---GTTATACCACTTCTAGGGTTTCCCTTC
CAGCTGCACGATGAAGCTTCTTCCTCTGTTTGTCCTTGCCATGGTAATGGTTAACGCTTGCGCCGTGTCTTCTCGCACGG
GGCTGAGAGACCATGTACTAGATGGAGTAGTGAAGATGGCAGCGACGGGAGAGGGGACGGCGATCGACAATCATCATGCG
ATACCGAGGACGGAGTATAGCAGCTGGAGCAGCCCTGGAAACATGCCCGGAAGTGGCCATGACATTGCTAGCGAAGAAGC
CAAGCCATGAGCA-AGCCTGAGATATGCATGCCTTTGTACGTAGC-----------------------------------
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----------------------------------ACACTTTGCATGCTAGGGTACGTATACGTACTCTTTTGAGTATNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGTGTGTGTGTGTGTAAATTAAGGGTGAGCCGGATCACGT
CTATATA--TTTACAGATGTTCTGTTTATATTGAATAAACCAACGTTCCTCTATATTCATTGATAGTTTACAGAATGAGC
TCTTGAAGTAGATTTCATCTGGATTTAGATCTTAAATCTTGAGTACTACCAAGGAGATGAATCAGTCCGAAATATTAT--
CTTTAACTATATTAT----------------------------AGGTACACATCGAATCCTTCATTAGATC------AAA
ATAAACCATTTAATTGAAGTTTAATAGATGGT-----------GATATTGCTATGGACTCATAAGATTGATGTTGAAGGA
ACCATATAATTTTGCTAACATATAGTCTAATAAATAACCAGAAAACCATGAAACAATCAACTGTTGACGTGAGAAAATAA
AAGAAATATATAACCATAATTATGTGTAAACTTGAAGGGAAACATGCATGTGCATACGGCATGCAATTGTTAAGGAGAGT
CTCGCCTGTTGTCTGCTGGCATGATACAACTGAACACTAGTTAAGATCTTTAATTCTTGAAATAAAATTTTCAGAGAATA
TTTCACTTTGATGAAAAACATTCCTCTCTCCTCAAA-GGGCATGCATTGTTTATGTAAGCTGAAACCACACCAATTTGTT
TACCTAAGCTGAAACCACACCAATTTGTTTATATAAATTTCATATGATACCAATTTCATTGAATAAAAAAC---------
----TTACATAAATCACTTGATAAAGTAGAATATCTCAATCAGTGAATATATAAATTCATATGA---TGCAATTTCATTA
AAAATAACTTACATAAACAGCTTCATAAAGTACCCGACATGGGTTTTAAGTCAT-AGTGTGTACAGGAGCCGCCGTGT--
--GGATATTAGAATAATGAGATGTTGTCCTTTTGTTCAGTAT
>chr2B_227
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-------------------------------------AATTCATG-GACATTTTTT-CAAATCCTCAGACA-TTTTCTGA
TTTTAGCTCGCGTTGATCGGTTGTTCATCCGCGATGGATAACCATGGCGGCACGACAGGCACCTATGATTCAGAATCCCG
GGTGCCTGATGTCTACAGTTGGATCCAGGTTAGGAGGTATATTTTATATTAAAACATATCAAAGGTTTAAAGGAAAGAGA
AAAGGAGGCTAAACCAGGTTATCACGACTCATGCTTTAAAGATCTTACCACCTAACTGAAATCACCTTTGACAGCTATGT
TCTTTCTCATAGTCAACTTTAGCCAAACTTATT-ACCTGCCATGCTCCCTGAAAAAAA-GAAGAG---ATATAACA--TG
TCATATGTCATACTGAAAGACAGCTGAAAAAGTGAGATATAATAATGCCCTTCTCCACTAAATTGTAGCTATCCAATAGT
AAGGCATCCTTGCATGTTTTTACAGTTATCTCTGTCTGGAGCATTATTCCACAATACTGAAATGTTTGGCAAGTAGAAAG
TTACTGAGGTGGACAGAAAATGCGCTTAGCCCACCAGAAATTGCCTTACCTAGGTGGAGAGCTC------------ACAA
GATAA-----------------------------------------------TTAAAGAGGCACTGCCAACTGTCCAATG
GAAATCAACATAGAGAAACTCCATCTGGTTCAGAAAGCTCTATTAATCTATCTCTC-GCCTATAAATAACTCATCACCAG
ATCTCGTGTCTCGTCTCGACCCAAAATCATTATAGGAAAACCAGCAAGCC---ACTATAACACTTCTAGGGTTTCCCTTC
CAGCTGCACGATGAAGCTTCTTCCTCTGTTTGTCCTTGCTATGGTTATGGTTAACGCTTGTGCCGTGTCTTCTCGCACAG
CACCGAGAGACCATGTACTGGATGGAGTAGTGAAGATGGCAGCAACGGGAGAGGGGACGGCAATCGACAATCATCATGCG
ATACCAAGGACAGAGTATAGCAGCTGGAGCAGCCCTGGAAACATGCCCGGAAGTGTCCATGACATTGCTAGCGAAGAAGC
CAAGCCATAAGCGCAGCCTGATATATGCATGCCTTTGTATGTAGC-----------------------------------
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----------------------------------AGACTTGGCATGCTAGGGTACGTATACATACTCTTTTGAGTCCTAT
GTA-----------------------------------------------------------------------------
---TAGTAGCAGTTGCATGTCGTGGGTTCCTGGT-GTGCTACCTATAAA-------------------------------
----------------------------------------------------TGTAAATTAAGGGTGAGCCGGATCACGT
CTATATA--TTTACATATGTTCTGTTTATATTGAATAAAGCAACATTTCTCTATACTCATTGATAGTTTACAGTATGAGC
TCTTGA------------------------------------GTACTACCAAGAAGATGAATCAGTCCGAAATACTAG--
CTTTACCTATAT------TAGAAGAACCATAAGAATATCAGCGAGGTACACAGCGAATCCTTCATTATATGAAT-AAAAA
ATAAACCATTTACTTGAAGT-----------T-----------GATATTGCCATGGATTCATAAGATTGATGTTGAAGGA
ACAATATAATTTTGCTAATATATGGTCTAGAAAATAACTAGGAAAACATGAAACAATCAAGTGTTGATGTGAGAAAATAA
AAGAACTATATCACCATAACTATATGTAGACATGAAGGGAAACATGCATATGCAGACGGCATGCAATTGTTAACTAGAGT
CTCGCTTGTTGTCTGCTGGCATGATACAATTGCACACTAGTTAAGATCTTTAATTCTTGAAATAAAGT----AGTGAGTA
TTTCACGTTGATGAAAAACAGCCCTCTCTCCTCAAAGGGGCATGCATTGTTTATGTAAGCTGAAACCACACCAATTT---
--------------------------GTTTATATAACTTTCATATGATAC-AATTTCACTGAAACCA-------------
--CTTAAAATAAATCACTTGATAAAGTACAATGTCTCAATCATTGAATATATAAATTTCATAT--GATACAATTTCATTG
AAAATGCCTTACACAAATAGCTTCATAAAGTA-TCGACATGGGCTTTTAGTCATTAGTGTACATGT--GCCCCCCTGG--
-GGGATGCTGGAATAATGAGATGTTATCCTTTGGTTCAGTAT
>SNPs
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------------------------S--------S----S-----------------------------------------
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S---------------------------------------------------------------S---------------
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---S----------------------------------------------------------------------------
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------------------------------------------------S-------------------------------
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-----------------------------------S--------------------------------------------
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>forward_430
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----------TGTCGATCGGCAGTTCATCA--------------------------------------------------
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>reverse_1444
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---ACCATAAGCAGCCTGATATATGCA-----------------------------------------------------
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>forward_453
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----------------------------------TCGATCACCAGGGAGGCAT---------------------------
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>reverse_4383
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--------------------------------------------------------------CAACAACTTCACTGAAAG
CACT----------------------------------------------------------------------------
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