>input_sequence_86156
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ATGGGGAGAGCCATGGCCGTCGGCGGTGCCGGCGCAAGTGACCACCTGAAGTCGT
CGTGGCCGGAGGTTGTGGGCTGGGACGGTATTACAGCGTCGCTCAAGATCAAAGCCGACAGGACGGACGTCTACATAGAG
TTGCACTTCGTCGGCGACAACGTGGCGCCGGGTGAAGACGACCACCGCGTCCGCCTTTTTGGCGACCGCGTCACCGGCTT
GGTCGCCCATACGCCCGTCGTTGGCTAG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr6D_1_TraesCS6D01G073300
TCATCGCGTCGTGGGAGAGCCCGGGCGAATTCTCCTGGCATGCGGAGGTCAGGGTGAACGGCCCGGGGATTTTGGGAGGA
TCGGGGCGAGAAAACCCTTTCCACGATGTTACCAAATTGGTCGTCTGAAAAACCGGGGTGGAGATTGCAGGCGGGAGTCT
CGCCCGGGAAAGGACGGGGATCCCAGGGGGATCCCTCGCAACCAAATGAGGCCTTAAAGGGGGTGGTGGTGGGGGATGAT
ACG-TTAAGGGATTTAACTTCCATAATAAGCAAATTAAAGACATGAATAAAAGTAGGCTCAAATGTGTACAAGCATAACA
AATGAACCA-TTTAAATATGCAGCCCTCCTTTTCATCATCTATTCTATCCTGCCCTCGACGAGACAGAGAGATACAGTAA
ACCGACAAGTGTTTAAGCTAAATATGTACACACGCATGA-CGTAATGTTTCATTATCCATGCATCGGGAAACAAGCCAAG
AGGCTCAGTTTACAATGCGAATCATATATACCCAATAT-----------------------------GCGTCGGAGTCGA
ATCATACCCAATCGGC-----TTAAACCT---------ACGCACATGTATATATACGTACTCCAGGT------CTGCACC
ATAACCGCAAGCTACCTGCTTTCGTCCTGTC-ATTCGCTGGTAAG----------AGACAAGCCATACTAATTTCCGCAT
CCGTATCTC--TCATTACATCAGCCATTAGTACTCCCTCCGTTTCTTTTTAATTTGCATATAAAATTTGATCAAAATCAA
ACTTTGTAATGCTTAACTAACTTTATAAAAAAATATCATCATCTACAGTACAAAAGTTATATGTTATGAAAATTAATTTC
ATCATGGATCTAATAATATAAATTTCATAGTGTGAATGTTGATATGTTTTCCTATAAAGCTAGTTTGACTTTGACCAAAC
CTTATATGCAAACTAAAAAGAAACAAGAGAGGTATATTACTAACATACATGTACTTGTTGGTCGGTATTTTGCAGCTAGT
GCACGTACTGGTGCAAGTGTGATCGATGGGGAGAGCCATGGCCGTCGGCGGTGCCGGCGCAAGTGACCACCTGAAGTCGT
CGTGGCCGGAGGTTGTGGGCTGGGACGGTATTACAGCGTCGCTCAAGATCAAAGCCGACAGGACGGACGTCTACATAGAG
TTGCACTTCGTCGGCGACAACGTGGCGCCGGGTGAAGACGACCACCGCGTCCGCCTTTTTGGCGACCGCGTCACCGGCTT
GGTCGCCCATACGCCCGTCGTTGGCTAGCCAGCCTATCCTGCTTGCGTG--------------CGCGCGCTTCTGCGTGC
GCGCGCTTTTGTGTGCTGTGTGCCTGCGTGTGTGATGCACCTACGAGCTACGCCCTTATACCAGTATACCACCGCTATGT
-TTACTGTACTACGTGATCCACATACATGAATGAAATAAGAGCCATCCATCTCATTAGTCATATACATATAACTTTTTTT
TGAGGAACATATACATATAACTTAATTATTACTAGAGGATAACGCACGTTTCACCGCGCCGTTCTTCATTTATGGGTTTG
TCTTTTTTTTTC-TCTAGCAGGTTATTGCGTTGGTTCTTATGTTTTGGTTTTATCTGTGTTGCCTTGAGTTCTAATTATG
TTCTGTTGTTT-TTTTTTCTTGTTTGTATTTCATGTTGGGTGCTGCTAGAAACGGTATTTATTCTGAGAGGAAAAATAAA
TTGTTTGGTGCGTGCTTATGGTGTC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TTTATATATTTCGGTCTC
GGTGTTAGTCAATGGTCCTCGCTATGCGAGCCCAC-AGGAGCTCCTATTCTACAGTAAAATCATGAATTTGTAAATATAA
CATTCACATGGGTCAGTTCACTAAGCTTCCGCAAACTTAGCTCGGTTCCTTGATCCACTAGCTCGCTTAGCATGGTTTGC
CACTCAATCCACTTATATCTTATAAAAAAAGGTCAGCGATCATTTTCTTTCGAAAAAGTTCGTTAAATCAAGCGGTGTTC
ATGGATTTTTAA-----------------AAATCA--CAAATTAAAAAACTTTGATTTTGCAAAAAATATTACGTA----
-----------------GCAAATTTAAC-AAAATCGACAAATTTTTATAATATACAAGAATTTAAAAATATCCATGCATT
ATTTTAAAATGTTCAATGATTTTAAAATTTGTTCATAATTTTTTTAAATGTTCATATATTTTAATAAATGTGCAAACAAA
ATTAAAAGAGAAGAAACACCAAAAAAAGAAGATAAACCAAATAAGAAGTTAAGAACCCTCAACCAATAATCCACACCCTT
ACTG
>chr6A_213
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CTTGAAGGGGTTGGTGGTGGGGTATGAT
ACGTTTAAGGGATTTAACTTGCATCATAAGCAAATTAAAGACATGAATAAAAGTAGGCTCAGATGTGTACAAGCAAAACA
AAGTAACCATTTTAAATATGCAGCCCTCCTTT-CATCATCTATTCTATCCTGCCCTCGACGAGACAGAGAGATACAGCGA
ACCGATAAGTGTTTAAGCTAAATATGTATACACGCATGA-CGTAATGTTTCATTATCCATGCATCGGGAAACAAGTCAAT
AGGCTCAGTTTACAATGCGAATCATA---CCCAATATGCCTTAACAACAGCGAGCTATGGCGTATTGGCGTTGGAGTCGA
ATCATACCCAATCGGCATTTTTTAAACCT---------ATGCACATGTATATATATGTACTCCGGGTACCTGTCTGCTCC
ATAACCGCAAGCTGCCTGCTTTCTTCTTGTC-ATTCGCTGGTAGGTACTCGTAGAAGACAAGCCATACTAATTCCCGCAT
CCGTATCTCATTCGTTACACCAACAATTATTAGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GTATATTACTGACATACATGTATTTGTTGGTTGGTATTTTGCAGCTAGT
GCACGTACTGGTGCAAGT--GATCGATGGGGAGAACCATGGCCGTCGGCGGTGCCGGCGCAAGTGACCACCTGAAGTCGT
CGTGGCCGGAGGTTGTGGGCTGGGACGGTATTACAGCGTCGCTCAAGATCAAAGCCGACAGGATGGACGTCTACATAGAG
TTGCACTTCGTCGGCGACACCCTGGCGCCGGGTGAAGACAACCACCGCGTCCGCCTTTTTGGCGACCGCGTCACGGGCTT
GGTCGCTCAGACGCCCGTCGTTGGCTAGCCAGCCTATCCTGCTTGCGTG--------------C----------------
GCGCGCTTTTGCGTGTTGTGTGCCTGCGTGTGTGATGCACCTACGAGCTACGCCCTTATACCAGTATACCACCGCTATGT
GTTACTGTACTACGTGATCCGCATACATGAATGAAATAAGCGCCATCCATCTCATTTCTCATATACATATAACTT-----
---------------------------ATTATTAGAGGATAACGCGCGCTTCTCCACACCGTTCTTCATTTATGGGATTG
TCTTTTTTT--C-TCTAGCAGGTTATTGCGTCGGTTCTTACATTTTGGTTTTATCTGTGTTGCATTGAGTTCTAATTATG
TTCTGTTTTTT-TTCTCA----TTCGTATTTCATGTTGGGTGCTGCTAGAGACTGTATTTATTCTGAGAGGAAAAATAAA
TTGTTTGGTGTGTTCTTATGGTGTCTTTAGGCTGGTTGTAATGGAGAGTATCATATACTAGTATCATGTATATGATACTA
GTGTATGATACTACCTTCCTAATGCATAGTATCATATATTAGTATCATGTACTACTTTATTTATTGCCATGCATGACACA
AAGTAGCATAACATTTATTATGATACGGTATCATGATATGATACTCCACCCTCTCTTTCTTCATTTAATGCTATGACACC
TCATCAAAATTGCCTAGTTGGCATGCATGATACTAGCTATGATACTACCATTACGATCAGCCTTTATATATTTTGGTCTT
GGTGTTAGTGAAATCGCAGAGTATCATG---CCACTAGGAGCTCCTATTCCACACTGAAATCATGAATTTGTAAACATAA
CATTCACATGGGTCAGTTCACTAAGCTCCCTCGAACTTAGCTTGGTTCCTTGATCCACTAGCTCGCTTAGCATGGTTTGC
CACTCAATCCACTTATATCTTATAAAAAAAAGTCAGGGATCATTTTCTTTTGAAAAGGTTTGTTAAATCAAGCAGTGTTC
ATGGATTTTTTA-----------------AAATGTTATAAGTAAAAAAACTTAGATTTTGCAAAGAATACAACATAGCAA
TTTTGAAATAAAGTTATGCAAATTTAACAAAAATCCACAAACTTCTATAATATACAAGAATTTAAAAATATCCATGCATT
ATTTTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr6A_405
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AAGTGTATAAGCGCG-TATGCACAGACGCATGACCGTAATGCTGCATTCTGCGTCCATGGGAAAACAAGTCAAG
AGGCTCAGTTTACAATGCGAATCATATTACCCAATCGGCGTTACCAACGGCGAGCTATGGTGGTGAAGGCCATTATCTTA
CTTACACGCAAATGTAACATATGACCGAATGCCTACGAATGCACGAGTATATATACGTACTCTAGGTACCTGTCTGCACC
ATAACCGCAAGCAACCT---TTCTTCTTGTCAATTCGCTGGTAGG----------GGCAAACCCATACTAATTTCTGCAT
CCGCATCTC--TCGTTACATCAACAATTAGTATATATAA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TACTAAAATACATGTACTTTTTGGTTCGTATTTTGCAGCCAGA
GGTTGGAAGAGGTTGCATC-GATCGATGGGGAGGGCCATGGCCGTCGGTGGTGCTGGTGCAAGTGACGACCTGAAGTCGT
CGTGGCCGGAGGTGGTGGGCTGGGACGGTTTCACGGCGTCGCTCAAGATCAAAGCCGACAGGATGGATGTTTATATAGAG
TTGCACACCGTCGGCGATGCCGTGGCGCCGGGCGAGGACGACCACCGCGTCCGCCTCTTTGGCGACCGTGTCACCGGCCT
GGTCGCCCAGACGCCTGTGGTCGGCTAGCCGGCCTATCCTGCTTGTGTGTGTGTTCCCGTTTAC----------------
GTGTGCGTACGCGTGT------------TGTGTGATGCACCTACCACCTACACTCCTATACCAGTATACCACCGCTATAA
-GATGTGTACTAAGTATATCCCACTAA--AATGAAATAAGAGCCATCCGTCTCATGTGTCATATAACATA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr6B_1085
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ATTAAAGCGTCGCTCAAGATCAAAGCCGACAGGATGGACGTCTACATAGAG
TTGCACTTCGTCGGCGACACCGTGGCGCCGGGTGAAGATCACCACCGCGTCCGCCTTTTTGGCGACCGCGTCACCGGCTT
GGTCGCCCAGACGCCCGTCGTTGGCTAGCCAGCCTATCCTGCTTGCGTG--------------C----------------
GCGCGCTTTTGCGTGTTGTGTGCCTGCCTGTGTGATGCACCTACGAGCTACGCCCTTGTACAAGTA--CCACCGCTATGT
-TTACTGTACTACGTGATCCGCATACATGAATGAAATAAGAGCCATCCATCTCATTTGTCATATACATGTAATAT-----
---------------------------ATTACTAGAGGATAACGCGCGCTTCGTCGCGCCGTTCTTCATTTATGGGATTG
TCGTTTTTT--CCTCTAGCAGGTTATTGCATCGGTTCTTACATTTTGGTTTTATCGGTGTTGCCTTGAGTTCTAATCATG
TTCTGTTTTTTCTTCTCA----TTTTTATTTCATGTTGGGTGCTGCTAGAGACGGTATCTATTCTGAGAGTAAAAAGAAA
TTGGCTGGTGCGCGGTTATGGTGTC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CTTATATATTTCGGTCTC
GGTGTTAGTCAGTGGTCCTCGCTGTGCGAACCCACTAGGAGCTCCTATTTCACACTGAAATCATCAATTTGTAACTATAA
CACACATAGGTC---GTTCACTAACCTTCCGCACACTTAGCTCGGTTCCTTGATCCACTAGCTCGCTTAGCATGGTTTGC
CACTAAATCCACTTATATCTTATAAAAAAAG-TCAGCGATCATTTTCTTTCAAAAAAGTTCATTAAATCAAGCGGTGTTC
ATGAATTTTCAAAAATATTGGATTTTTAGAAATGTTTCAAATTAAAAAACATAGATTTTGCAAA-AATATTACATAGAAA
ATTTGAAATAAGGTTATGCAAATTTTAC-AAAATCCACAAACTTTTAATATATAC-AGAATTTAAAAATATTCATGAATT
ATTTAAAAATGTTCGATGATTTTTAAAGTTATTCAC-ATTTTTTAAAATGTTCACATGTTCT----AATGTGCAAACAAA
ATTAAA-GAGAAGAAAAACTAAAAGAAGAAGATAAACCAAATAG--------GAACCCTCAACCAATAATACACACCCTT
AC--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------S-----------S-----
--------------------S---S------------------------------------S-------------S----
--SS----------------------------S--------------------------------------------SS-
-----S---------------------------------------------------------------------S----
---------------------------SSS--S-SSSS---------------------------------S--------
---------------------------------------S----------------------------------------
-----------------------S--S----------------S------------------------------------
-------------S--------S-S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------S-----------------
------------------SS------------------------------------------------------------
---------------------------------------------------------------S----------------
-------------------S------------------------------------------------------------
---------S------------------------------------------------------SSSSSSSSSSSSSSSS
-----------S---S----------------------------------------------------------------
--------------------S-----------------------------------S------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S--S---S-----------------------S---
---------SS--------------------S--------SS--------------------------------------
-------S------S-SSSSSS----------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----S--------------------S---S-S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------SS-----------------S-----------S--------S------
-----------------------------------S-----S--------------------------------------
--------------S--------S---S--S----SS-------S---------S--S--S-SSSS--------------
------S---------S--S----S------------------SSSSSSSSS------------------S---------
--SS
>forward_143
--------------------------------------------------------------------------------
-------------------------------------------TCTGAAAAACCGGGGTGGAG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>reverse_1573
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ACCGCGCCGTTCTTCATTTA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
