>input_sequence_86146
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-----------------ATGAGCCTGGGCTACCTGAGCAGGGTGTGCGCCAGGGTAGTGCAGGCCGCCGTGCGCGCGGAG
CAGCCGGCGTCCACGATGTCTAAGCCATCACCGGTGGCGCAAGTCCCTCACCGCCGCTCCCGGTTCTCCGGTGGGATGGC
TGATCAAACTCCCGTGGCGGCGAAGACGGCAGCAGGGACGACGAGGAAAGCGGAGAAGGATGAGAACGTGATGCACCTCA
TCTGCTGGGGACCAGATTAG------------------------------------------------------------
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>chr6A_1_TraesCS6A01G155100
TAATTACGTGGTTAGCATTGAATTTGATATTAGGTAGTACTAGTAAATGCATATGTGCAATGCATGTTCATATTAGGTAG
AATATACTCCCTTCGTTCAAAAATAAGTGTCGCTGATTTAATATAAAGTTGTACTCCCTCCGTCCCGAATTACTTGTCAA
----------AGAAATGGATTGCGACAAGTAGTTCGGGACGGAGGGAGTGCTAACTTTGTATTAAATCACGGACACTTAT
TTGGACA-GAGGGAGTATTTTTTTAGGGATATTTGACAGAACATTAATCGTGTTATATTAGATAAGATATTAATTATATA
ATAATTATGTGATTATTGCTAATATCAATATTTGATATAA-----------------ACATGTTGAACGCTCGTCGTTGA
AGCAATCTAGGTTGCTAAATTGACATGAATTAATGGTCCAGAATACTTGGATCTACCCCTTTCGTA-TTTATATATTGGT
ATTAT----------------------ATATAAATTGCACGTTAAACATGTTTATCTCGTTTCTTG--TTTTTTTTTGAG
AAATTTTAAACATGTTTATCTCTTTTACTGCATGCATCGTCG-CCATGTTAGACTGGTATATGGGCCTGGCTTATCATGA
CCGAGGCAACAACTAAATGAGGTTCATTTTCCTCGCAAACTAAATGAGGTTCATGTTA-AAAAAAACTAAATTTGGTTCA
AAATGGAAACAAGTA--CAAACGTGAATTGAAATGGGAGAGTGGATTCTCCCAAAGAAACGTTTGGCACCTCTTAACTTG
CCGCATAAAACTATTTCTTGGCCAATAAGTATTTTAAAGAGATAGTCTTGGCCAACAAGTAGTGACACAGCACATGCTCA
TGCCTTAAGTAGCGAGGTCCGACTTTTGATTAACCAACAGGATGAAAAACAAACCCCGTGGAATCAGCAGTATCTCCATT
AACCGCCTATACGTTTCACAAGATAATTTCTGAATTTCTGGCAGGAAGCAGGATCCGACTGGTCGACGAAGTGAACTGAC
CGGCGAGGTTGGCGGCGATGAGCCTGGGCTACCTGAGCAGGGTGTGCGCCAGGGTAGTGCAGGCCGCCGTGCGCGCGGAG
CAGCCGGCGTCCACGATGTCTAAGCCATCACCGGTGGCGCAAGTCCCTCACCGCCGCTCCCGGTTCTCCGGTGGGATGGC
TGATCAAACTCCCGTGGCGGCGAAGACGGCAGCAGGGACGACGAGGAAAGCGGAGAAGGATGAGAACGTGATGCACCTCA
TCTGCTGGGGACCAGATTAGACAGACCCAACGCAGTGTAATCTCAACGAGAAAATTCTTTATTTGACACTGTTTTAAAAT
TTAGTTTCTTATTTGACACTAGAAAAGTTTTTCTTCCTTATTTGACACCAGTACTAAAATTTATTCTCTATATGACACTT
CCGTTCATTTTGAGCCTAAATAACACCTGAAAAGACGATTTTGCCCCTCATGCGGTATGTGTGCGCATC--CGTGTGTGA
TGTTGCGTCTGTGGGTGCAC-----------------TGCGTGTGTGTTTGCTACTGCGTGTGTACGTGCGCGCGCGTG-
-----------------------TGTGCTGCCTGCGTGTGTGCTGTTGC-------------------------------
-------------------GTGTGTGTGCGTGCATGTGTGTTGCTGCGTGTGTGT-------------------------
-------------------------------------------------TGGTGCATGTGTATGTGTTGCTACGTGGGTG
CTCCTGCCCTCGCACTGATGTTGCGTGTGTGCACTATTGCCCCCCACACAAATACCATATGAGGGGCAAAAGAGTCTTTT
CAGGTGCCATTTAGGCTCAAAATGAACGGAATTGTCATATAGGGAATAAAATTTAGAACTAGTGTCAAATAGGGAAGAAA
TTGTTTTTCAGTGTCAAATAAAGAAGCAGATTTTAAGATAGTGTTAAATAAGGAATTTTCTCAATCTCAATTGGTAGTTG
TTTGAATAACTAGTCTTCGAAA--CCATTTTTTTTGGCAAAACCAGTTTTAGGAGGATTTTTAGAAAAGCCATTTCTAAG
TTGTT---TTTGTTAAAGCTAGCTTACGGAATATTTTGTTTTTAAAAATTGTCTTATCAATTTCGACATTGATACACGTA
CAACGATTCCTTTTTGAAGGCTTTGTCTAGGAATATCATATTACCGTTCGATCGCATGTAGTAGGGTTTGTGAAGATCCT
GTTGCGAGGTAGATTCAATTTAGATGTCGATATTGGACTTTGTCTCATATCATAGAATAATCTCAATGCAGAGGCCGAAG
ACATTCCCCTCTTTTTTTTTTGAGGAACCGGCAGGAGCACTGCCTTTTCATATAAGAAGGTAGTTTATGTAC
>chr6D_1
TAATTACGTGGTTAGCACTGAAGTTGATATTAGGTAGTACTAGTAAATGCATATGTGCAATGCATGTTCATATTAGGTAG
AATATACTCCCTTCGTTTAAAAATAAGTGTCGCTGATTTAATACAAAGTTGTACTCCCTG------------CTTGTCGA
----------AGAAATGGATTGCGACAAGTAGTTCGGGGCGGAGGGAGTGCTAACTTTGTATTAAATCACGGACACTTAT
TT-GGATGGAGGAAGTA---TTTTAGGGATATTTGATAGAATATTAATCGCGTTATATTAGATAAGATATTAATTATATA
ATAATTATGTGAGTATTGCTAATATTGATATTTGGTATAA-----------------GCATGTTGAACGCTCATCATTGA
AGCAAACTAGGTTGCTAAATTGACATGAATTAATGGTCGAGAATAGTTGGATCTACCCCTTTCGGTGTTTATATATTGGT
ATTAT----------------------ATATAAATTGCACGTTAAACATGTTTATCTCGTTTCTTGTTTTTTTTTTTGAG
AAATTTTAAACATGTTTATCTCTTTTATTGTGTGCATCCTCG-CCGTGTTAGACTGGTATATGGGCCTGGCTTATCATGA
CCGAGGCAACAACTAAATGAGGTTCATGTTA--------------------------A-AAAAAAACTAAATTTGGTTCA
AAATGGAAACAAGTA--CAAACGTGAATAGAAATGGGAGAGTGGATTCTCCGAAAGAAACGTTTGGCACCTCTTAACTTG
CCGCATAAAACTATTTCTTGGCCAATAAGTATTTTAAAGAGATAGTCTTGGCCAACAAGTAGTGGCACAGCATATGCTCA
TGCCTTAAGTAGCGAGGTCCGACTTTTGATTAACCAACAGGATGAAAAACAAACCCCGTGGAATCAGCAGTATCTCCATT
AACCGCCTATACGTTTCACAAGATAATTTCTGAATTTCTGGCAGGAAGCAGGGTCCGGCTGGTCGAAGAAGTGAACTGAC
CGGCGAGGTTGGC---GATGAGCCTGGGCTACCTGAGCAGGGTGTGCGCCAGGGTAGTGCAGGCCGCCGTACGCGCGGAG
CAGCCGGCGTCCACGATGTCTAAGCCATCAGCGGTGGCGCAAGTCCCTCACCGCCGCTCCCGGCTCTCCGGTGGGTTGGC
TGATCAAACTCCCGTGGCGGCGAAGACGGCTGCAGGGACGACAAGGAAAGCGGAGAAGGATGAGAACGTGATGCACCTGA
TCTGCTGGGGACCCGATTAGACAGATCCAACGCAGTGTA-----------------------------------------
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---------------------------------------------------------------ATCTCAATTGGTAGTTG
TTTGAATAACTAGTCCTCGAAA--CA---TTTTTTGGCAAAACCAGTTTTAGGAGGATTTTTAGAAAAACCATTTCTAAG
TTGTTGTCTTTGTTAAAGCTAGCTTACAGAATACTTCGTTTTTAGAAACTGTCTTGTCAATTTGAACATCGACAAACGTA
CAATGATTCCTTTTTGAAGGCTTTGTCTAGGAGTATCGTATTACAGTACGATCGCATGTGGTAGGGTTTGTGAAGGTCCT
GTCGCGAGGTAGATCCAATTTGCAAGTTGATATTGAACTTTGTCTGACATCAT---------------------------
------------------------------------------------------------------------
>chr6B_1
TAATTACGTGGTTAGCACTGAAGTTGATATTACGTAGTATTAGTAAATGCATATGTGCAATGCATGTTCATATTTGGTAC
AATATACTCCATCCGTTCAAAAATAAGTGTTGTTGATTTAATACAAAGTTGTACTCCCTCTGTCC-GAATTACTTGTTGA
AGAAATGGATAGAAATGGATTGCCACAAGTAGTTTGGGACGGAGGGAGTACTAACTTTGTACTAAATCACGGACACTTAT
TTTGGATGGAGGGAGTATTTTTTTAGGGATATTTGATAGAATATTAATCGCGCTATATTAGATAAGATACTAATTATATA
ATAATTATGTGATTATTGCTAATACTGATATTTGGTATAATATTTATTGCATGTTAAACATGTTGAACGTTTGTCATTGA
AGCAATTTAGGCCGCTAGATTGACATGAATTAATGGCCGAGAATAGTTGGATCTACCCCTTCCGATGTTTATATATTGGT
ATTACCGTATTGGTATAGATATAAATGATATGAATTACACGTTAAACATGTTTATCTCGTTTGTTGTTTTTTTG---GAG
AAATTTTAAACATGTTTATCTCGTTTATTGTGTGCATCCTCGCCCATGTTAGACTGGTATATGGGCCTGGCTTATCATGA
CCGAGGTAACAATTAAATGAGGTTCATGTTA--------------------------AGAAAAAAACTAAATTTGGTTCA
AAATGGAAACAAGTATACAAACGTGAATAGAAATGGGAAAGTGGATTCTCCTAAAGAAACCTTTGGCACCTCTTAACTTG
CCGCATAAAACTATTTCTTGGCCAATAAGTATTTTAAAGAGATAGTCTTGGCCAACAAGTAGTGACACCGCACATGCGCA
TGGCTTAAGTAGCGAGGT---------------------------AAAACAAACCCAGTGGAATCTGTAGTATCTCCATT
AACCGCCTATACGTTTCACACGATAATTTCTGAATTTCTGGCAGGAAGCAGGGTCCGACTGGTCGAAGAAGAGAACTGAC
CGGCGAGGTTGGC---GATGAGCCTGGGCTACCTGAGCAGGCTGTGCGCCAGGATAGTGCAGGCCGCTGTGCGCGCGGAA
CAGCCGGCGTCCACGATGTCTAAGCCATCACCGGTGGCGCAAGTCCCTCACCGCCGCTCCCGGCTCTCCGGTGGGTTGGC
TGATCAAACTCCCGTGGCGGCGAAGACGGCAGCAGTGACGACGAGGAAAGCGGAGAAGGATGAGAACGTGATGCACCTGA
TCTGCTGGGGACCCGATTAGACAGATCCAACGCAGTGTA-----------------------------------------
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---------------------------------------------------------------ATCTCAATTGGTAGTTG
TTTGAATAACTAAGTCTCCGAAACCA---TTTTTTGGCAAAACCAGTTGTAGGAGGATTTTTAGAAAAACCATTTCTAAG
TTGTTGTATTTGTTAAAGCTAGCTTACAGAATACTTTGTTTTTAGAAATTGTCTTGTCAATTTCAACATCGACACGCGTG
CGATGATTCCTTTTTGAAGGCTTTGTCTAGGAGTATCATACTACCGTTCTATCGCATGTAGTAGGGCTTGTGGAGGTCCT
GTCGCGAGGTAGATCCAATTTGGACGTCGATATTGAACTTTGTCTCACATCATAAAATAATCTTGATGAGGAGGCCGAGG
GCATTCCCCTTTTTT---------------------------------------------------------
>chr4D_1267
CAAGA---------------------------------------------------------------------------
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-------------------------------------------------GAAAATTCTTTATTTGACACTGTCTTAAAAT
CTGGTTCCTTATTTGACACTGGAAAAGTTTTTCTTCCCTATCTAACACTAGTCCTAAATTTTATTCCCTATACGACACTT
CCGTCCATTTTGAGCCTAAATGACACCTGAAAAGACGATTTTGCCCCTCATGCGGAATGTGTGTCCGCGCGCGTGTGTGC
TGTTGCGTGTGTGGGTGCACGCGCACATGTGTGCTGCTGCGTGTGTGTTTGCTACTGCGTGTGTACGTGCGCGCGCGCGT
GTGTGTGTGCTGTTGCGTGCCTATGTGCTGCCTGCGTGTGTGCTGCTGCTGCGTGTGTGTATATGTGTGTGTGTGCTGCG
TGCGTGGGTGTTGCTGCGTGTGTGTGCGCGTGCATGTGTGTTGCTGCGTGTGTGTGCGTGTGTGTGTGTGCACGCGCGCG
TGCGTGTTGTTGCGTGTGTGTGCGCGTGCGTGTGTGCGCACGTGTGTGTTGGTGCATGTGTATGTGTTGCTGCGTGTGTG
CTCCTGCCCTCGCACTGATGCTGCGTGTGTGTGCTATTGCCCCCCACACACATACCATATGAGGGGCAAAAGAGTCTTTT
CAGGTGTCATTTAGGCTCAAAATGGACGGAAATGACATATAGGGAATAAAATTTAGAACTTGTGTCAAATAGGGAAGAAA
AACTTTTCCAGTGTCAAATAAGGAAGCAGATTTTAAGATAGTGTCAAATAAGGAATTTTCTCAAT---------------
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>SNPs
-----------------S----S---------------------------------------------------------
-------------------------------------------S----------------S----S------------S-
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--S-SSS-----------------------------S----S--------S-----------------------------
-------------------------SS-------S----------------------------------------S----
--------------------------------------S------S------------------SS--------------
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---------------------------S--SS------S-----------------------------------------
---------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------
----------------------------S----------------------S----------------------------
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----------------------------------------------------S-------------S-------------
-------------SSS----------------------------------------------------------------
---------------------------------------------------------------S-----------S----
------------------------------------------------------------------------------S-
-------------S-----------S-------------SSSSSSSSSS-----------------------S-------
S-S---S-------------S----------------S---S-S----S---S-----S-------S-----S-------
----S----------------S---------------------------------S-------SS-SSS----------S
--------S--------------------------------------------------------------------S--
---------------------------------------------S----------------------------------
--------------------------S-----------------------------------------------------
-----------------------------------------------------------------------S----S---
--------------------S----------SS-----------------S-----------------------------
------S-----------------S------S--S-------------------------S-------------------
SSS----S-------------S----------------------S-----------------------------------
---------------S---------SSSS---------------------------------------S-----------
---------------------------S-----S----------S----------S--------S----S--S-------
---S----------------------------S------------------------------------------S----
--S-----------S------S--S----------S-----------S------S--------SS---SS--------S-
S---------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_396
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--------------------------------------------------------AACATGTTGAACGCTCGTCG----
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>reverse_1504
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---------------------------------------------------------------CGCATCCGTGTGTGATG
TTG-----------------------------------------------------------------------------
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