>input_sequence_86119
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-----------------------------------------------------------------AT----------GGC
TTCTTCTTCCAGCGCTCGAAGCAGCTGTGTGGCCACATGCCTCGTGCTGCTTCTCCTGCTCGTCAGCCTGCGAGAAGCCT
CCGCCGCGCGCCCGCTACGGCCGGCCGGCGACGTGTCCAGCG------AGGTG---AAGT------ACCCGGCGGTCGTC
GACAAGTACGCGCCCCTTCTGCTCGCCATGCTGCCGAGGGCCCCGACTCCGCCGTCCGCCCCGAGCGG-TGGCACGAACG
AGGCCAGGAACTGA------------------------------------------------------------------
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-----------------------------------------------------------------
>chr2D_1_TraesCS2D01G522100
ACATTCGGACGTCGGAGGAGGACATTACCGAGTCAGAGTCGGAAACCGACGAGTAGTTGAACTTTTCTTTTATCTGTGTA
CGCAAGAACTATCTATGTATCCCTTTTCATCGGAAAAAAATGACCGGCGATGTCGGCAACGAAGCAGGCGGTGGAGGGTG
TGCGTGCGCGGAGAGGAGAGAGGGCGAGCGCGCACGTTTCCGTCTTGTGTCCGCGCCGACGCAAATCCGGCTCAAAAATG
GACCGGGAATGGGTCGGCGGGCGCGCCGACCCAAACGGACGCGGCGGACGAAATGGGTCGCCCATTGAAGTTGCTCTTAT
GAACCAAACAGGCCTGAGTTATGGCGTGTTCACTTGGTGGCAGCCTAGATTAGCAGGTTAGGACGCACCGTCGCCTCCAC
CGGCCGGCGTACGCACGCACGCGTTGCGTTTGACGAAATGCGCGGTGAGCCGCCCACGTACGGGAGCGCATCGGAGCCGC
GTTTTCCACC----------------------------------------------------------------------
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--------------------------------------------------------------TGCTCCCTCCATCGGACG
GCACTCGGA--GAGGGAGGGAGCATGGAACGACCGCGTCCAACGACCCTCGATCGGCACTCACTCAAGTCGCGGTCGCGG
TCGCCGGTGCGCGC-----ACATACCACCGACCGACCCTTCCCTTCAGTCAGCCGGCCGGCCGGCCGTTTCCACCA----
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---------------------CCCATCTTTTTCACGTTGGCGCCGGCTGAAATGAACGCAGCCCCTGCTCTCAAGTCTCA
AGTGGTCTAACAAATTTCCACCAGAGCAGAAGAGGCAGAGTCATCCTCTCTTCTGAGAAGATTCCCAG-GCCCTTCCAC-
--------TTCAGCCTCCTCGTTT-----GAC-----CCCTTCCACTC-AACACTCACCTC-------------------
---------------CA---CCCATCACTTGATCCCTATATATGAGCAGCTCCACACCCAAC-------A-------CAG
ATAAACACAAAAAGCAGACCCT----CTTCCTTTCTTCTCAAAGAAAGTTCTCTCCTTGCTCA--------GGCCTCA-G
CTCACTG-C-AAATTCCC----TACATCGATCCTCTCCCCATCGTCGCTTGCAA----------AAT----------GGC
TTCTTCTTCCAGCGCTCGAAGCAGCTGTGTGGCCACATGCCTCGTGCTGCTTCTCCTGCTCGTCAGCCTGCGAGAAGCCT
CCGCCGCGCGCCCGCTACGGCCGGCCGGCGACGTGTCCAGCG------AGGTG---AAGT------ACCCGGCGGTCGTC
GACAAGTACGCGCCCCTTCTGCTCGCCATGCTGCCGAGGGCCCCGACTCCGCCGTCCGCCCCGAGCGG-TGGCACGAACG
AGGCCAGGAACTGATCGA-------------------------------------------TCTATAGCACAGAAATCGT
TAGGCATACCTACGT------------ATACTC--------AGTGGTTGATGGTTT-GTTCTGTTTTGCAGTACAAAA-A
CTTGTACAG----GATTGTTAGAGTGGGAAA--CGGACGTATAGTGTAGGATATTACC-------CCAAAAATTATACCT
TCATTCTTTCGTTTGTCCCTTGAAGTACTACTTGTTGATT-GAAAGAGTTCTGTCGTGATCCATTCTTTGAAGAATTGAC
TGTTCATAGTCACCGATGCAAGATGATACTCACAATAAGAATA----TCCCAGCTCTTGACCTCTGCAACAACTCTCAGA
GGTAAGTTTTACAACCCACACAGATAATTAGGAA---AAAAACAGTAAGGCCGACATTCTTACATGATGAGTTGACCTAA
ATCAGTAACAATTAATATGGAAAAAGGTGAAAGAATAGTTCGCTTTGTGCTCACCACGCAGCTGTGCCGGCTGGGTTTTC
CGAACCGCTTCCGTGATTGGGCGGCGGTCTTGCTCTGCACTTCCTCTTCATGCGTTCTTCTGAATGGAGTTGCCGGGCCT
CCCATATTCCATGGCCAGGAGCTTCGACAGGGGACCCCC-TTTCCCCCCCGCTCTTTGTCCTGGCAATTGATCCACTTCA
AGGGGTTCTTGGACGCCGCTACTAGACACAACCTTTTGCGCAAGATTATAGGGAGGCGCCCGGTTGTTCGTACTTCACTA
TACGCCGACGACGCTGCGATTTTCATCACACTGACAAAGGAGGATGTCCACAACCTTGCTATCATTCTTAAATCATTCGG
CGAGACCACCTGGTTGACCACCAACTTCCAGAAGAGCTCGGTGGTCGCCATCCGCTGTGGCCAGTTAGACCTTGATGACA
TTCTCCATAGCATCCCTGCCGCACGGACGTCCTTCCCGATGAAGTACCTTGGGCTGCCCCTCTCCATCTAGAAACTCAAG
AGGGTGGACTTCATCTTGAT----GACAAGGTTGCTGCAAAACTGCCTCCCTGGCAAGGAAAAAC
>chr2B_341
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--------------------ATGGCGTGTTCACTTGGTGGCAGCCTAGATGAGCAGGCTGGCACGCACCGTCGCCTCCAC
CGGCGTACGTACGCACGCACGCGGTGCGTTTGACGAAATGCGCGGTGCGCCACCCACGTACGGGAGCGCAGCGGAGCCGC
GTTTTCCACC----------------------------------------------------------------------
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--------------------------------------------------------------TG----CTCCATCAGACT
CGCTCGGTCACTC-GGAGGGAGCATGGAAGGAACGCGTCCAACGACCCTCGATCGCCACTCACTCAAGTCCCAGTCGCGG
TCGCCGGTCCGCGCCCATACCATACCACCGACCGACCCTTCTCTTCAGTCAGCCGCCCGC----CCGTTTCCACATGCAT
GTTTTCCTGTTGCAGCCGCACCCCTGCTACAGTAGCGTCCAACGCTGCCTACGCTGCCATAA-TTATTCTCGAGTCTAAA
CTACCTAGTGTCCTCCCGAACGC----CTAGCTATGCACAAGACAAACGATTAGG-------------------------
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-----------------------------------------------------------------------TACATACGC
TGAATATACTTAACCAAAGCTCAACTAATTAATGGACCGGATGAGTTGCTTTCATCTT-------TTTCTCTCTAGGATA
CGTATAAGCATGCGTGTCATCAATTAAG----------------------------------------------------
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------------------------------------AGAGGAGGATGAGTTGCTTTCATCAAAAGATAAGCAGCTACTTG
CACAAGTTTATATGGATCCCGCCCATCTTTTTCACGTTGGCGCCCGCTGAAATGAACGCAGCCCCTGCTCTCAACTGGTC
TG----------AATTTCCACCAGAGCAGAAGAGGCAGAGTCATCCTCTGCTCTGAGAAGATTCCCAG-CCCCTTCCAC-
--------CTCAGCCTCCTCGTTT-----GACTAGACCCCTTCCACCC-AACACTCGCCTC-------------------
---------------AAACTCCCATCACTA------TATATATGAGCAGCTCCACACCCAAC-------A-------CAG
ATAAACACAAAAAGCAGACCAT----CTCCCTTTCTTCTCCAAGAAAGATCTCTCCTTGCTCA--------GGCCTCA-G
CTCACTG-C-AAGTTCCC----TACATCGATCCTCTCCCCGTCGTCGGTCGCGA----------AACAACTAATGGCTTC
TTCTTCTTCCAGCGCCCGAGGCAGCCGCGTGGCCACATGCCTCGTGCTGGTTCTCCTGCTCGTCAGCATGCGAGAAGCCT
CAGCCGCGCGGCCGCTCCGGCCGGCCGGCGACGTGTCCAGCG------AGGTG---AAGG------ACCAGGCGGTCCTC
GACAAGTACGCGCCGCTTCTGCTCGCCATGCTGCCGAGGGCCCCGACTCCGCCTTCCGCCCCGAGCGG-TGGCACGAACG
AGGCCAGGAACTGATGAAGCACCCGCAAGGTTTTCCACTAGA--ATGGAT-----GATCGATCTCTACAAGAGAAATCGT
TA--------------------------TGCTG--------AGTGGTTGATGGTTT-GCTCTGTTTAGTAGTACAAGATA
GTTATACAG----GACAGTTACAGTAGGAAA--AGGACATATTGTGTAGGATACTAGGATATACCCC-AAAATTATACCT
TCATTCTTTCGTTTGTCCCTTGAAGTAC---TTGTTGATT-GAAAGAGTTCTGTAGTGATCCATTCTTTGAAGAATTGAT
TGTTCATACTCACCGATTCAAGATGATACTCATAGTAAGAATA----TCCCAGCTCCTGGCCTCCGCAGCAGCTTTCAAA
GATAAG-TTTACAATCTACACAGAATATCAAGGGGGGAAAAACAGTAAAGCCGCCATTCTGACCTGAAGAATTTACCCAA
A-------------------------------------------------------------------------------
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>chr2B_486
CACTCAGCCTCCCCGTTTGACCCCTTCCACCCAACACTCGACACCACCACACATCGCTATATATGAGCAGCTCCACACCC
AACACAGATAACATAAACACAAAAAGCAGACCGTCTCCCTTCTCCAACATCTCTCGTTGCTCACTGCCAAGTTCCCTCCA
TCGAATCATCTCCCCGTCGTCGCCCACGAAACAATTAATGGCTTCTTCTTCCAGCGCCCCAAGCAGCCGTGCGGCCACAT
GCCTCGTGCTGCTTCTCCTGGTCGTCAGCCTCCGAGAAGCCTCCGCCGCGAGGCCGCTCCGGCCAGCCGTCGACATGCCT
AGCGAGGTGCCCAAGGACCAGGTGATCGTCGACAAGTACGCGCCTCTTCTGCTCGCCATGCTGCCGAGGGGCCCTGTGCC
GCCTTCGGCCCCGAGCGGTGGCACAAATGAGGCCGGGAACTGATTCAGCAAGCGCAGGGCTTGCCACTAGGATGAATCTA
TAGATCTCTAGAAATCGTTAGCCATAAAGTGGTAGATGGTATGGACGTACTGTTTTGCAGTACAAGATACTCGTACAGGA
TTGCTAGTGGGAAATGAACATATAGGGTATGATATACTTCAAATTTATACCTTAATTCTTTCGTTTGTCCCTCGAAGTTT
TCTAATGAAAGAGCTTTGTCTTGACCCATTCTTTGAAAAAATGATTGTTCATAGTCACCGATTCAAGATGATACTGGCAG
TAAGAATGTTCCAGCTCTGACCTCTGCAACAACTTTACAAGATGAAACTATTTTTGCTTATCGCTCGCACATGGGCGGAG
TTGGGCCCCAGGCAGCCCAGGCCACTGCCTGGGGCGTGGGAACATTTCTAGACCCATATATACAAAAAAATATTTGGCCT
GGGGCGCAGCCACTTCAAAGCCCAGGCCAACGGCCCAGCCGCGCAGGCCAGAGCCTTTCTACCCGACTGACAGTTAGCAC
GAACGGGAGCTCCTATTCGCCGCTCGCTGCGGCAAACAGGCGCGGTTTCGCACAGGCGGGTGTCCAACTGGGCCGGCCCA
TGAATGTAACAACCGACAGTACACTGTAGCTAAAAAAAATGCCGTCAACATGGGACTTCAAAACCAAGACCTCTCGCTAA
ACCTGACGTGGTTCTACCAGTTGAACTAGCATTCCTTACTGATTATACAACAGTGCCAAGCTTAAAGAACCAACCGCAGC
GCAGATCCACATAATATCTTGAATTTCAAAAGCATTTTTTATTGAGAAAACCGAAGGGATCTGTGAACACGAACAAATTC
CTAAGTTGCGAATAAAATATTAAAACTGAAGTATATTTTAAAATATGTAACATTTTTTGAAATTCCAAGACAAAATTTAA
AAACATGAACATATTTTGGAAAATGTGAAACCAAGAACATTTTTTGAAACTGGTGAACAAAAAATTGAAACTGAACTATT
TCGAAACTCCTGAAAAATGAAAACTTGTACATTTTTGAAATTTGTGAACAATTTTTGAAAACAGGAACATGTTTTCAACT
GCCCGAACATTTTTTGAAAATGATGAACACAAATTTGAAACTGAAGAATTTTGAAACTCCTGAAAAAATGAAAATGTGTA
CTTTTTAAAATTTGTGAACAATTTTTGAAAATGGGAACATGTTTTGAACCACCTGAACATTTTTTGAAATTTGTGAACAA
AAATTTGAAACTCAAAAATAAACCTGTGCACATTTTTTGAAATTTATGAACAATTCATTTAAAACGGGAACTTGTTTGGA
ACCACCCGAACATTTTTTTTAAAATTTAGGAACAAAAATTTGAAACTGAGCAATTTCGAAACTCCTGAAAAAATGAAAAC
ATGCACATTTTTTGAAATTTGTGAACAATTTCTTTAAAACGGGAACATTTTTTGAAACTAGAACAATAAATTAAAAATGG
AACATTTCCAGAATTCATGACCAAAATTTAGACCGACGAAAGTTTTTAAAAATTTGAAAATTTCTCAAAAATATGAAAAA
AAATGAAGAAAGAAAAAAGAAACTCGAAATAAGAATGAGAAACAAAAAAAGAAACAGAAAAAAGTAAATACAAAGAAGAA
AAAGAAACAGAATAATGACAAAAAGAAAAAGGAAAAAAGAAAAACAGAAATTAAAAGGAAAATCGGACGATAGTACAGGA
ACTGCGTACGCATAATGGGCTGGCCCATCGCATCGCTCGGTCGCTTCGCCCGTGCGAAGCGCCGGCAGTTTGACGCAGCG
CGCGTCAAATAGGGTATTCCAGCACGAACAGAACCGAAGCAGGGGAATTCGTCCGTCGCCCCTCCCCCAACTTCACGAAT
CCTTCCGTTTTGAAAAAAAAACTTCACAAATCCTAGGCGTCGCCGCCGCGTCCCTTCCCGTCGGCGCCGCCTGCTGCCGC
TACCCCTGTCGAACGTCGTGCTGCCTTCCCCCGGTCCAGTCCCCTTTTGGCCTTCTCCACCTCTACTGTCTACCTGCGCA
GAGGCAGTCAACACCTATCCAGCCGCTACCCCTGCCGGCCGTCATGGGCTGCTGCCCTGTCCGGCGAGGCGGCGACCCCG
GCAAACTGCCAGCGAGGTGGCCCTTCCTCAGCGGCCCCAACACATTGCAGACAGCAGCAAGAGCAAAGGTAGTTCTTCCA
AACCTCAATTTCTGTTTGTAGATGCTTCTGTAGTTCTGTTTGATGATGGTTTAATCAATTTCTAGATGACACCCTTGTTG
CTTGATGCCACTACTTGTTAGATACTTAGATGGTAAAACAAAATTTGACATTTAGGAACAAAATGGGTGATGATTGGATG
AATCATAGAATGGTATGTTACATTGAGCGAGATGTATTTGTTAGTATCGAAGAATCAAAGATGAAGTCATAGGAATCTCA
GATTTATCATTGAAGGTGTAGCTTCTTCTGCTATAGAAGATGTAGTCATGGGAGGCTCAGATCAATCAATCCTTTGATTT
CATATCAATCTTTTGTATCATTTATATATGCTACATATTGTCTTTTGATTTGCCTTGCTTTATTAGTTGGCCCATCATGG
AACAAATGTTGTCATTGAATATCATGTTTGGTTTCCTGTTAGTTATGCAACATAGATTGATTTTTGTATGTCTTGAAACG
ACAGTTTTTTGTGTTTAGTTTTTAGCCCTTAGTTTGTCAGCCAATCCTGACTCTGCCGCTGCTCGCAGGGACGGGTTACC
CGCAGGTACGAAAAACCCGACAGGGCAGGGATAGGCAAAAAAGGAGATAAAAACACTCACGGTCACTCAAATTGCGATTG
AAGCACGATACGGTCCGTATTTTCACGTCACATCGTATTCAGTGACCGTATCGAGCGTATTTCTGAGTTCAGTGACCGTA
TCGTGCTTCAATCGCAACTAGAGTGACCGTGAGTGTATTTATCTCCCAGAAAACTGCCCACCTGCTCCCTCCATCGGACG
GCACTCGAAGGGAGGGAGGGAGCATGGAAGGCACGCGTCCAACGACCCTCG----GCACTCACTCA------AGTCGCGG
TCGCCTGTCCGCGC-----CCATACCACCGACCGACCCTTCCCTTCAGTCAGCCGCCCGC----CCGTTTCCACATGCAT
GTTTTCCTGTTGCAGCCGCACTCCTGTTACAGTAGCGTCCACCGCTGCCTACGGTCCCACAGTTTAGTCTCGAGTCTAAA
CTACCTAGCGTCCTCCTGTACGCCTATCTAGCTATGCACGAGACAAACGAGTTTGGTACATACCCTATAGAGTTTTCCTC
CCGTCCCTGTTTTCCTCTCGTCCCTGGCGGCTGGAACCCTAGCCGCCGCCAGGGGAGGCTGATCTTCCAACGCCGCTCTC
CGGCGGCTCCCCTCCACCGGCGACCTCGGTCATCGGTGGTGAGAGGAATCGCCGGATCCACGCGTGTGGATCATTTTTTA
CTCTCTCGTAGTCTAGGTTTTTAGGTTGTTCATCGTCTTTGCTTCGGCGGCGACAATGACAACATTGAATAAAGATTCTT
CGGATCCTTCCCTGACGAGGCCATCGGTCCTATGGTTGGGGATGGATTTAGAAACCAGTCTGTTCAAGTAAGGATGGCGT
GGCGGCGGCGGCATTCTCGTGGTGGACCTGTGTCCTCGGGCTCCACCGTTTGCGACGGCGTTTGCTCCAGCGTCGGCGCG
GAGCTTGGGAGGTAGTCCAGGAGCGGATGCAGATTGTGGTCTGCATCGACGACATCTCGAAGACGGAGCATGTGCTGGGC
TCGTGGTTGGTGGATGGCAGATATGTTTCCTCCTCCGGCGTTTTAGTCGTGGTGGGTTGCCAGATCTGGAGTACCATGGC
GTGTCCGGGGTGTTGCCCCGGTCTGATTCGTTCAACGGTAAAGGTTTCACTTTTGGCGAGCCACCTTGGAGGTCCGTAAA
GCTGCATATCAGCGATGGAGCCGCGTCGAGCTCGGGTCAGGAGGTGATTCGTCATTCTTTTCTTCGGCGGCTGCTGTGGT
GGTGCCGGAGGCAGGTGACGGGCGTTGATGTCAAGCTCAGAGATGTTTTGTTATCTTTTCAGTTTTGTCATGTCGGTCTT
TACGTGACTTGTACTTTGTTCTTTATGATATGAATGAGACACGTGTTACCATGCAAAAAAAAAAAAAAAAATACATACGC
TGAATATACTTAACCAAAGCTCAACTAATTAATGCACCGGATGAGTTGCTTTCATCTTCGTTTTCTTTCTCTCTAGGGTA
TGTATAAGCATGCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNATAAGAGAGGAATCCTCAAAAAAAAAAAAGAGGAGGATGAGTTGCTTTCATCAAAAGATAAACAGCTACCTG
TACAAGTTTATATGGATCCCGCCCATCTTTTTCACGTTGGCGCCGGCTGAAATAAACGCAGCCCCTGCGCTCAAGTCTCA
AGTGGTCTAATAAATTTCCAC-----CAGAAGAGGCAGAGTCATCCCCTGTTCTGAGAAGATT-CCAG-CCACTTCCAC-
--------TTCAGCCTCCTCGTTT-----GAC-----CACTTCCACTC-AACGCTCACCTCCACCCTTCACTTGATCCCT
ATATATGAGCAGCTCAAACTCCCATCACTATA--------TATGAGCAGCTCCACACCCAAC-------A-------CTG
ATAAACACAAAAAGCAGACCAT----CTTCCTTTCTTCTCCAAGAAACATCTCTCCTTGCTCA--------GGCCTCA-G
CTCACTG-C-AAGTTCCC----TACATCGATCCTCTCCCCGTCGTCGCTCGCGAAGCAACT---A------AATGCCGGC
TTCTTCTTCCAGCGCTCGAAGCAGCCGCGGGGCCACATGCCTCGTGCTGATTCTCCTGCTCGTCAGCCTGCGAGAAGCCT
CTGCCACGCGTCCGCTGCGGCAGGCCGACGATGTG---------------------AAGG------ACCAGGCGATCGTT
GACAAGTACGCGCCGCTCCTGCTCACAATGCTGCCGAG------------------------------------------
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>chr2B_658
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---------------------CCCATATTTTTCACGTTGGCGCCCGCTGAAATGAACCCAGCCCCTGCTCTCAACTGGTC
TA----------ACTTTCCACCAGAGCAGAAGAGACAGAGTCATCCTCTACTGTGAGAAGATTCCCAG-CCCCTTCCAC-
--------CTCAGCCTCCTCGTTT-----GACTAGACCCCTTCCACCC-AACACTCACCTC-------------------
---------------AAACTCCCATCACTATA--------TACGAGCAGCTCCACACCCAAC-------AGAGAGCACAG
ATAAACACAACACGCAGACCAT----CTCCCTTTCTTCTCAAAGAAAGATCTCTCGCTCCTCAGCAGCTCAGGCCTCA-G
CTCACTG-AAAAGCTCCTTAATTACATCGGTCCTCTCCCCGTCGTCGCTCGAGAAACAGCT---AAT----------GGC
TTCTTCTTCCAGCGCCCGAGGCTGCCGAGTGGCCACATGCCTCGTGCTGGTTCTCCTGCTCGTCAGCCTGCGAGAAGCCT
CCGCCGCGCGCCCGCTCCGGCCGGCCGGCGACGTGTCCAGCG------AGGTG---AAGG------ACCAGGCGGTCCTC
GACAAGTACGGGCCGCTTCTGCTCGCCATGCTGCCGAGGGCCCCGACTCCGCTGTCCGCCCCGAGCGG-TGGCACGAACG
AGGCCAGGAACTGATCGA-------------------------------------------TCTATAGCACAGAAATCGT
TAGGCATACGTATGCTCAGCAATAGTGATGCTC--------AGTGGTTGATGGTTT-GCTCCGTCTTGCAGTACAAAA-A
CTTGTACAG----GATTGTTAGAGTGGGAAA--CAGACATATATTGTAGGGATATACC-------CCAAACATTATACCT
TCATTCTTTCATTTGTCCCTTCAAGTAC---TTGTTGATT-GAAAGAGTTCTGTCGTGATCCATTCTTTGAAGAACTGAT
TGTTCATAGTCACCGATGCAAGATGATACTCAAAATAAAAATA----TCCCAGCTCTTGACCTCTGCA------------
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---------------------------------------CTTCCTCTTCGTGCGTTCTTCTGAATGGAGTTGCCGGGCCT
CCCATATTCCCTGGCCAGGGGCTTCGACAGGGGGACCCCCTTTCCCTCCTGCTCTTCGTCCTGGCAATTAATCCACTTCA
AGG--------------GCTACTAGACACAACCTTTTGCGCAAGATTAGAGCGAGGCACCCGGTTGTTCGTACTTCACTA
TACGCCGACGACACTGTGATCTTCGTCACACCGACAAAGGAGGATGTCCACAACCTTGCTATCATTCTTAAATCATTCGG
CGACACCACCGGGTTGACCAGCAACTTCCAGAAGAGCTCCGTGGTCGCCATCCGCTGTGGCCAGTTAGACCTGGATGACA
TTCTACATAGCATCCGTGCCGCACGGACGTCCTTCCCAATGAAGTACCTTGTGCTGCCCCTCTCCATCTGGAAACTCAAG
AGGGTGGACTTCCAACATCTTGACGACAAGGTTGCTACAAAGCTGCCTCCCTGGCAAGGAAAAAC
>chr2A_736
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-------------------ACCAGAGCAAAAGAAGCAGAGTAATCCTCTGTTCTGAGAACATT-CCCAACCCCTTCCGTT
CCACCTCGCTCAGCCTCCCCGTTT-----GAC-----CCCTTCCACTC-AACACTCACCTC-------------------
---------------CAACTCCCATCACTATA--------AAT----AGCTCCACACCCAAC-------G-------CAG
ATGAACACAAAAACCAGACCAT----CTCCCTTTCTTCTCCAGGAAAGATCTCTCGTTGCTCA--------GGCCTCA-G
CTCACTG-C-AAGTTCCC----TGCATCGATCCTCTCCTCGTCGTCGCTCGCTCGCCAAC-----------AATGGCTTC
TTCTTCTCCCAGCGACCGAAGCAGCCGCGTGGCCACATGCCTCGTGCTGATTCTCCTGGTCGTCACCCTGCGAGAAGCCT
CTGCCACGCGTCCGCTGCGGCCGGCCGACGATGTG---------------------AAGG------ACCAGGCCATTGTT
GACAAGTACGCACCGCTCCTGCTCACCATGCTGCCGAGGGGCCCTGCGCCGCCTTTGGCCCCAAGCGGTTGGCACGAATG
AGGACAGGAACTGATTGA--------------------------------------------------------------
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>chr2B_770
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-----------------------------------------------------TGAGAACATTCCGGG-CTTCTTCCAT-
--------CTCAGCCTCCCCGTTT-----GAC-----CCCTTCCACTC-AACACTCACCTC-------------------
---------------CAGCTCCCATCACTATA--------TATGAGC---------------------------------
------------AGCAGACCTT----CTCCCTTTCTTCTCCAAGAAACATCTCTCCTTGCTCAGCAGCTCAGGCCTCA-G
CTTACTG-CAAAGTTCCC----TCCATCGATACTCTCCCCGCCGTCGCTCGCGA----------AACAATTAATGGCTTC
CTCTTCTTCCAGCGCTCGAAGCAGCCGCGTGGCCACATGCCTCGTGCTGCTTCTCCTGGTCGTCAGCCTGCGAGAAGCCT
CCGCCGCGCGCCCGCTCCGGCCGGCCGGCGACGTGTCCAGCG------AGGTG---AAGGAGAAGGACCAGGCGGTCGTC
GACAAGTACACGCCGCTTCTGCTCGCCATGCTGCCGAGGGCCCCGACTCCGCCGTCCGCCCCGAGCGG-CGGCACGAACG
AGGCCAGGAACTGATGAAGCAACCGCAGGGTTTTCCAGTAGG--ATAGATGGATCGATC----TCTACAAGAGAAATCGT
TCAGCATA------------------------CATATGCTCACTGGCTGATAGTTT-GTTCTGCTTTGCAGTAAAAGATA
GTTGTACAG----GATTGTTAGAGTGGGAAA--A----------TGTAGGATACTACT-------CC-AAAATTATACCT
TCATTCTTTCGTTTATCCCTTGAAGTAT---TTGTTGATT-GAAAGAGTTCTGTCGCGATCCATTCTCTGAAGAATTGAT
TGTTCATACTCACCGATGCAAGATGATACTCACAGTAAGAATA----TCCCAGCTCCTGGCCTCTGCAACAACTTTCAAA
GATAAG-TTTACAATCTACACAGAATATCAAGGAAA-AAAAACATTAACGCCGCCATTCTTACATGACGAATTGACCTAA
CTCAGTG-----------GGAAAAAGGTGAAGGAATAGTTCGCTTTGTGCTCACCACGCAGCTGCGTCGGCTGGGTTTTT
AGAACCGCTTCCAGGATTGGGTGGCGGTCTTGCTCTGCACTTCCTCTTCGTGCGTTCTTCTGAATGGAGTTGCCGGGCCT
CCCATATTCCATGGCCAGGGGCTTCGACAGGAGGACCCCCTTTCCCCCCTGCTCTTCGTCCTGGAAATTGATCCACTTCA
AGGGGTTCTGGATACA-GCTACTAGACACAACCTTTTGCGCAAGATTAGAGGGAGGCACCCGGTTGTTCGTACTTCACTA
TACACCGACGACGCTGCGATCTTCGTCACACCGACAAAGGAGGATGTCCACAATCTTGCTATCATTCTTAAATCATTCGG
CGAGACCACCGGGTTGACCACCAACTTCCAGAAGAGCTCGGTGGTCGCCATCCGTTGTGGCCAGTTAGACCTTGATGACA
TTCTCCATAGCATCCCTGCCGCACGGACGTCCTTCCCAATGAAGTACCTTGTGCTGCCCCTCTCCATCTGGAAACTCAAG
AGGGTGGACTTCCAACATCTTGACAACAAGGTTGCTACAAAGCTGCCTCCCTGGCAAGGAAAAAC
>chr2A_770
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-----------------------------------------------------TGAGAACATTCCGGG-CTTCTTCCAC-
--------CTCAGCCTCCCCGTTTGACTAGAC-----CCCTTCCACCC-AGCACTCACCTC-------------------
---------------AAACTCCCATCACTATATTACTATATATGAGCAGCTCCACACCCAACGCAGAGCA-------CAG
ATAAACACAAAAAGCAGACCATCTCCCTCCCTTTCTTCTCCAAGAAACATCTCTCGTTGTTCAGCAGCTCAGGCGTCA-G
CTCACTG-C-AAGTTCCC----TCCATCGATCGTCTCCC-GCCGACGCTGGCGAAACAATT---AATGGCTT----CTTC
TTCTTCTTCCAGCGCCCGAAGCAGCCGCGTGGCCACATGCCTCGTGCTTGTTCTCCTGCTTGTCAGCATGCGAGGAGCCT
CCGCCGCGCGTCCGCTCCCGCCGGCCGGCGACGTGTCCAGCG------AGGTG---AAGG------ACCAGGCGGTCGTC
GGCAAGTACGCGCCGCTTCTGCTCGCCATGCTGCCGAGGGCCCCGACTCCGCCGTCAGCCCCGAGCGG-TGGCACGAACG
AGGCCAGGAACTGATGAAGCAACCGCAGGGTTTTCCACTAGG--ATGGATGGATGGATCGATCTATAGCACAGAAATCGT
TAGGCATA------------------------CGTATGCTCAGTAGTTGATGGTTTGGT---------------------
----TACAT----AATTGTTAGAGTGGGAAA--TGGATATATTGCGTAGGATACTAGGATATACCCC-AAAACTATACCT
TCATTCTTCCGTTTATCCCTTGAAGTAT---TTGTTGATT-GAGTGAATTCTGTCGTGATTTATTCTTTGAAGAATTGAT
TGTTCATAGTCATCGATGCAAGATGAT-CTCGCAGTAAGAATA----TCCCAGCTCCTGGCCTCTGCAACAACTTTCA--
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>chr2D_792
CACTC---------------------------------------------------------------------------
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-----------AGCCTCCCCGTTT-----GAC-----CCCTTCCACCCCAACACTCGACAC-------------------
---------------CG---CCCATCG--------CTATATATGAGCAGCTCCACACCCAAC-------A-------CAG
ATAAACACAAAAGGCAGACCTT----CTCCCTTTCTTCTTCAAGAAAGATCTCTCGCTGCTCA-----------------
----CTGCC-AAGTTCCC----TCCATCGATCATCTCCCCGTCGCCGCTCACGAAACAATT---CAT----------GGC
TTCTTCTTCCAGCGCCCGAAGCAGCCGTGTGGCCACATGCCTCGTGCTGCTTCTCCTGGTCGTCAGCCTCCGAGAAGCCT
CGGCCGCGAGGCCGCTCCCGCCAGCCGTTGACATGCCTAGCG------AGGTGCCCAAGG------ACCAGGTCATCGTC
GACAAGTACGCGCCGCTTCTGCTCGCCATGCTGCCGAGGGGCCCCGTGACGCCATCCGGCCCCAGCGG-CGGCACGAACG
AGGCCGGGAACTGATTGAGCAAGCGCAGAGCTTGCCGGTAGG--ATGGATGTATAGATC----T-----CTAGAAATCGT
CAGGCATA------------------------C--------AGTGGTAGATGCTATGGTACTGTTTTGCAGTACAAGATA
CTCGTACAG----GATTGTTAG--TGGGAAA--TGGACATATAGTGTAGGTCTGTAGGATATACCCC-AAAAATATAACT
TCATTCTTTCGTTTGTCCCTCCAAGTAT---TTGATTAAG-GAGTTTTTTCT----T-ATCCATTCTTCAAAAAATTGAT
TGTTCATAGTCACCGATTCAAGATGATACTGGCTGTAAGAATG----TCCCAGCTCCTGACCTCTGCAACAACTTTAAAA
GATAAG-TTTACATTCTATGCAGATAATTACGAGGG-GAAAAAACAGTAA------------------------------
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>chr2A_792
CACTC---------------------------------------------------------------------------
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-----------AGCCTCCCCGTTT-----GAC-----CCCTTCCACCCCAACACTCGACAC-------------------
---------------CG---CCCATCG--------CTATATATGAGCAGCTCCACACCCAAC-------A-------CAG
ATAAACACAAAAGGCAGACCAT----CACCCTTTCTTCTCCAA----CATCTCTCATTGCTC------------------
---ACTTCC-AAGTTCCC----TCCATCGATCATCTCCCCGTCGCCGCTCACGAAACAACT---CAT----------GGC
TTCTTCCTCCAGCGCCCGAAGCAGCCGTGTGGCCACATGCCTCGTGCTGCTTCTCCTGGCCGTCAGCCTCCGAGAAGCCT
CGGCCGCGAGGCCGCTCCGGCCAGCCGTCGACATGCCTAGCG------AGGTGCTCAAGG------ACCAGGTGATCGTC
AACAAGTACGCGCCGCTTCTGCTCGCCATGCTGCCGAGGGGCCCCGTGACGCCGTCCGGCCCCAGCGG-CGGCACGAACG
AGGCCGGGAACTGATTGAGCAAGCGCAGGGTTTCCCTTAGGATAATAGATCCATCGATC----T-----AAAGAAATCTT
TAGGCATG------------------------C--------AGTGGTAGACGGTAT-GCTCTGTTTTGCAGTACAAAATA
CTTGTACATACATGATTGTTAGACTGGGAGACTTGGGCATATAG--------TGTAGGATATACCCC-AAAATTATACCT
TCATTCTTTAATTTGTCCCTTGAAGTAA---TTGATTGAAAGAGTTTTGTCT----TGATCCCGTTTTTGAAAAGTTGAT
TGTTCATAGTCACTGATTCAAGATGATACTGGCGGTAAGAATT----TCCCAGCTCCTGGCCTCTGCAACAACTATAAAA
GATAAG-CTTACAT-CTACGCAGAGAATTAGGAA----------------------------------------------
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>chr2B_875
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--------------------------------------------------------CCCATC-------A-------CAG
ATGGACACAAAA---AGACCAT----CTCCTTTTCTTCTCCAAGAAAGATCTCTCATCGCTCA--------GGTCTCA-G
CTCACAG-C-CAG-TCCC----TGCACCGGCCCTCTCCTCCTCGTCGCTCGCGAAACAAT-------GGCTT----CTTC
TTCTTCTTCCAGCCCCCGAAGCAGCAGCGTAGCCACGTGCCTCGTGCTGGCTCTCCTGGTCGTCAGCCTCAGAGAAGCCT
CCGCCTGGCGCCCGCTCCGGCCGGCCGGCGACGTGTCCAGCGGTAGCGAGCTG---AGGG------ACCAGGCGATCGTT
GACAGGTACCCGCCACTTTTGCCCACCATGCTGCCGAGGGGCCCGGCACCTCCGTCCGCCCCAAGCGG-CGGCACCAACG
AGGCCGGGAACTGATTAAGCAAGCACAAGGTTTTGCCGTAGG--ATGGACCTGTCGATC----T-----ACAGAATTCGT
TAGGCACT--------------------------------------------------------------------AATA
GTTGAACAG----GATTCTTTGAGTGGGAAA--CGGACATAGGTC------------------CCCC-AAAATTATACCT
TCATTCTTTCGTTTGTCCCTTCAAGTAT---TTGATTGAAAGAGTTCTGTCT----TGACTCATTC-----AGAATCGAT
TGTTCATAATCACCGACTAAAGATGATACTGGCAGCAAAAATA----TCCCAGCTCCTGACCTCTGCAACAACTTTAGAA
GATCAGTTTTACAATCCACAAAGATAATTAGGAAAG-GAAAAATCAGTAA------------------------------
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>chr7D_880
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-------------------------------------------------------------C-------A-------CAG
ATAAACACAAAAAGCAGACCAT----CTCCCTTTCTTCTCCAAGAAACATCTCTCCTTGCTCAGCAGCTCAGGCCTCAAG
CTTACTGCA-AAGTTCCC----TCCATCGATCCTCTGCTCGTGTCTTAGTTTGCAAGAAAAAACAAT----------GGC
TTCTTCTTCCAGCGCCCGAAGCAGTCGCGTGGCCACATGCCTCGTGCTGCTTCTCTTGGTCGTCAGCCTGCGAGAAGCCT
CCGCGGCGCGTCCACTCCGGCCGGCCGGCGACGTGTCCAGCG------AGGTG---AAGG------ACCAGGCGATCGTC
GACAAGTACGCGCCGCTTCTGCTAGCCATGCTGCCAAGGGCCCCGGCGCCGCCGTCCGCCCCGAGCGG-TGGCACGAACG
AGGCTGGGAACTGATGAAGCAACCATAGGGTTTTCCACTAGG--A-----------------------CAGAGAAATCGC
TAGGCATA------------------------CGTATGCCGAGTAGTTGATGGTTTGGT------------TACAAGATG
GTTGTACAG----AACTGTAAGAGTGAGAA-------------GCGTAGGATACTAGGATATACCCC-AAAATTATACCT
TCATTCTTTCGTTTATCCCTTCAAGTAT---TTGTTGATT-GAAAGAGTTCTGTCGTGATCCATTCTTTGAATAATTGGT
TGTTAATTATCACCTATGCAAGATGATACTGGCAGCAAGAATTAATGTCCCAGCTC------------------------
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>SNPs
SSS-SS-SSSSS-S-SSSSSSS-S--S-SSSSSSSSSSSSSS-SSS-S--SSS-S-S-SS-SS-SSSSSSSSS-SSSSSS
SS--SSS-SS-SS--SSS-SSSSSSSSSSS-S-SSSSSSS-SS--SS-SSSSSSS-SSS-SS-SSSSSSS--SSSSSSSS
-SSSSS-SSSSSSSS-SSSSS-SS-SS-SSSSS-SSSS-SSS-SS-SSS---SSSS-SS-SSSS-S---SSSSSSS-SSS
-S-SS-SSS--SS--SS-S--SSSS-S-S-S-SS-SSSS-SSSSSSSS---SSSS-S--SSS-SSSSSSSSSS-SSSSS-
SSSSSSSSSSSSSSS--SSS------------------------------S------S-S-S------------------
----SS-----------------S-----------------------S----------------------S---------
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-------S---------------------S--S-------------------------------------S-S-------
--------S----------S-----------------------------------S---SSSSS----------SS----
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----------S--------------------------------------S-------------------S----------
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-----------------------------SS--SS---------------------------------------------
--------------------S---------------------------S-------------------------------
------------S---------------------------S-----------S---------------------------
-------------------------S------------------------------------------------------
----------------S------------------------------------------S---------S----------
--------------S-----------------------------------------------------------------
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---------S--S-S--------------S--------------------------------------------------
--------------------------------------S--------------S--------------------------
----------------------------SSS------------------------------------------------S
--------------------------------------------------------------------------S---S-
-S------------S---------------------------------S----S-------------S--S---------
------SSSSSSSSSSSS-------------S--------------------------------S-S------------S
S-----------SS-------S---------------------------S------------------------------
-------------------S-------------SS--------------S------S-----------------------
---------S-SSSSSS-------------------------------S--------S----------------------
--------------------S---S------S------------------------------------------------
----------S---------------------------------------------------------------------
-------------------------------------S-------------S-----------------S----------
------------SSSSSSS-----------------S----S-----------------------
>forward_317
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---------------------------------------------------------TCGCCCATTGAAGTTGCTCT---
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>reverse_6573
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------------ACGCCGCTACTAGACACAAC------------------------------------------------
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