>input_sequence_86008
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---------------------------------------ATGGCCGTCGCGAGGAGGACGATGAGGCTCGCCGTGCCGGT
GCTCGTGGCGGCGCTGCTGCTTCTGGCGGTCCTCGGCGAGGCGGCGCGGCCGCTGGGCGGCGCCGACTGGGCGGCCGCCG
GAGGGACCCCGCTGCCGGGCGCGTCGGCGAC---CATGGCCCAGGCGCTCCGGCGGCTGTACACGCAGCGGCTGGGCGGG
CCAGGCGCCTCCTGCACCACCAACAGCCCCAACGTCCCCTGCCCGCCGTAG-----------------------------
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>chr7A_1_TraesCS7A01G199700
TAGCTTGAGCAGCTTAA---CAATTATCACACGTACTCCTACTATGTAAGATGCTTCGAAAAAGGTGCGAGCATGGTAAC
AGACGGTGGCAAGGTTTTGAGCAGTTTCTTGGAAATTGGCTAGGGTGGGATCGACTCCGGATAAACATTGAGAATTCAGG
CCAAGTTCAGGACGGAATTCAAATGTTTTGACCGTATCAGTTGACAGGCACGTATCGGAGACGACCCCAGTACTACACAG
TGTCGACGACAAACTAAATTAAGCTTCTCCCTAAATTAAGTACGCACAGTCCCTGTTGAACGCTAGGTCAAACTAGACCC
CTGCCTAGTGCCTTGGCCCCCAAGGCGTTTCCCTGGTCAAAGTAAACCACATTTCCACGTATGTTAACATATATGGAGCT
CCCCTAAAAAAACATATATGTACAGATGAATTTGTACAGAAGG-AA--------GTTTGTTACAAGAAAAATATAAATGT
ATTTTTGCTGCAGGCA---ACAGGTACATTGTACGC-----------------------------------------ATT
TGTTCCCATGCATCATGCTCTGGTCAAGACGTGCGACACGCTCGTGCCTTCGACGCTTCTTCGTGCGCGCGCAGTTTGCT
ACCTCTCCATGCGCGCGCGCG----CGCACGAACGCACCGCGG-GGTAGGAAGAAGAACGGATCGCTTTCGTTTCGACGA
TGGAATTCTACGAGGGAATGCCCGATACCGACCGCGCGCGCTCGCCGGCCCTGCGTGCCGCGCGCATATTGACTTTTCAT
CAAACGGGACGGACGCGCGAAAGCCAGGTCGCCGCACGTAACCGGCATGCAACTTCCTGCCTAGTCTCCACGCCTCGCTA
GCTCCATCGACCGCCTCTTCTCCCCTGCCTGCGTTATATATAGGCGCCGCCCGTTCATTCCA-AGCTACTACCACCTCGT
CGAAGAATTACATCTCGACGACATTGCCAAAACCCAGCGTCGTGCAGCCCCC-TACAAGCTTGTTCTAAAGGG-------
---------AGAAGAAGGAAGCCAAGGTTGACGGGATCGATGGCCGTCGCGAGGAGGACGATGAGGCTCGCCGTGCCGGT
GCTCGTGGCGGCGCTGCTGCTTCTGGCGGTCCTCGGCGAGGCGGCGCGGCCGCTGGGCGGCGCCGACTGGGCGGCCGCCG
GAGGGACCCCGCTGCCGGGCGCGTCGGCGAC---CATGGCCCAGGCGCTCCGGCGGCTGTACACGCAGCGGCTGGGCGGG
CCAGGCGCCTCCTGCACCACCAACAGCCCCAACGTCCCCTGCCCGCCGTAGAGGCCGAG--GCCGGGCGGCGAGACCCGG
CCGTCCTCCACGACCACCCCCTCCCTCCCTCCTCTCTCGGGTTCAAGCTTGTTTTTGACGGACCAGCCCGGGCGGCGATG
GCGGGCTCACAGTGTGCGCATGTTCTTTTTCCCTAGCTAGCTAGGCCGGCCGACTAGCCGCCGGCGGTCGACATGGTTTG
ATTGGTTGAATTCGTTGGTTGGTTTCTTGGAGATTTTTTCGTTGCCCGCGCGTGGTTTTCGCTTTCGCCGGGTGTTGATT
TGTACAGAAGAAAACATACTCGTATACT-----TGGTAGGATCTTTTTGTTTTTGAATAAAACATAGGCAAGCTGCGAAA
GTGTACCAGCAACACATGTATATACCTTTCTCTATAAAGTGATACATATTATATATGCTTTGTGATAATTTGTCAAATCT
TAACAAAGC-------ACAGTTATGTACTCTAACTCAAACAAAAAAAGAAAG-TTATGTGCTCTGATTTGGGTTCGTGGA
TCAACAAAAACGTGTCACCTGTTCACCGTTCACGCATGCCTGGAAGTGTTTTTCTTCTTACAGAGACCTTCATTGCACTT
GCGTGGAAGTGGAAGCTGACATTCGCGTGCGTCACTCGTGGCCTCATGAGGCCAAAAGGCAGAACTTTTCACGACGCCAC
GTGTATGCCTACGGTGGCGTCAACCGTTTCTCGG--AAGTAATTGGGCACCTCGGCTCCATTTTGTCCTTCTCTCTCGGC
TTGTTTGGCTGGCGGCGAACACAAGTCGTAGGCGGTGCTCACCCGGGCCAGTTCGATCTCCCGCTGGACGCCAGCATGGC
CTCAGTTCCACGATAGCAG-CTGCCGGCCTCACCTCAGCCATCAATTCTCATCTTTCT-GTCGGCGGCCGGTGTTTCAAT
TTAGACCGTCTACAGCCGGACTCTTCAAACCCCCTCTATACGTCTGGACGGATGGCGCGGGCAAAAAATCC----GACTC
AAAGGAATTTCTGAGAATTCAATTAGAGATGCCT
>chr7D_1
TAGCTCGAGCAGCTTAATACCAGTTATCACACGCACGTAC-----GTAAGATGCTACGAAAAAGGCGCGAGCCTGGTAAC
AGACCGTGGCAAGGTTTTGAGCAGTTTCTTGGAAATTAGCTAGCTAGGGTGGGACTCCGGATAAACATTGAAAATTTAGG
CCAAGTTCATGACGGAATTCAAATGTTTTGACCGTATCAGTTGACAGGTACGTATCGGAGACGACCCAAGCAC-ACACAT
TGTCGACGACAAACCAAATTAAGCTTCTGCCTAAATTAAGTACGCACAATCCCCGTTGAACGCTAGGTCAAACTAGAGCC
CCGCCAAGTGCCTTGGCCCCCTAGGCGTTTCCCTGGTAAAAGTAAACCACATTTCCACGTATGCAAACATATATGGAGCT
CCTTAAT-------TATATACACATATGAATTTGTACTCCTACAAAAAAAGTGGGTCTGTTACAAGAAAAATAGAAATGC
ATTTTTGGTCTCAAGCAACACAGGTGCATTT---GTACAAATCAAAACATGTGGGCGAGTCATGGATATATGCATGTATT
TGTTCCCGTGCA---TGCTCTGGTCAAGACGGACGACACGCTCGTGCCTTCGACGTTTTTTCGCGCGCGCGCAGTTTGTT
ACCCCTCCGTGCGCGCGCGCACGCACGCACGAACGCACCGCCGCGGTAGGAAGATTGGAACGC-----------------
------------------------------ACCGCGCGCGCTCGCCAGCCCTGCGTGCCGCGCGCAT--TGACTTTTCAT
GAAACGGGACG----CGCGAAAGCCTAGTCGCCGCACGTAACCGGCATGCAACTTCCTGCCTAGTCTCCACGCCTCGCTA
GCTCCATCGACCGCCTCGTCTCC----CCTGCGTTATATATAGGCGCCGCCCGTTCATTCCA-AGCTACTACCACCTCGT
TGAAGAATTGCATCTCGACGACATTGCCAGAACCCAGCGTCGTGCAGCCCCCCTACAAGCTTGTTGCAAAGGGAGAAGAG
A----CAGAAGAAGAAGGAAGCCAAGGTTGACGAGGTCGATGGCCGTCGCGAGGAGGACGATGAGGCTCGCCCTGCCGGT
GATCATGGCGGCGTTCCTACTTCTGGCGGTGCTCGGCGA---GGCGCGGCCGCTGGGCGGCGCCGACTGGGCGGCCGCCG
GAGGGACCGCGCTGCCGGGCGCGT---CGAC---CATGGCCCAGGCGCTCCGGCGGCTGTTCACGCAGCGGCTGGACGGG
CCGGGCGCCTCCTGCACCACCAACAGCCCGAACAACCGCTGCCCGCCGTAGAGGTCGAC--GCC-GGCGGCGCGACTCGG
CCGTCCTCCACGACCAACCCCTG--------CTCTCTCGGGTTCAAACTTGTTTTTCACGGACCAACCCGGGCGGCGGTG
GCGGGCTCACAGTGTTCGCATGTTCTTTTTCCCTAGCTAGGTAGGCCGGCCGACTAGCCGCCGGCGACCGACAAGGTTGG
ATTGATTGAATTCGTTGGTTGGTTTCTTGGAGATTTTTTTGTTGCCCGCGCGTGCTTTTCGC------CGGGTGTTGATT
TGTACAGAAGAAAAGATACTCGTATACTACTCCTGGTAGGATCTGTTCG--TTTGAATAAAACATAGGCAACCTGCGAAA
GTGTACCAGCAACACATGTATATACCTTTCTCAGTAAAGTGTTATATTTT-----------GTGATCCATTGTCAAATCT
TGACAAAGC-------ACAGTTATGCACTCTAACTCAAAAGAAAAAGGCAGTTTTATGTGCTCCGAATTTGGTTTGAGAA
TAGACAAAAACGTGTCAGCT-------GTTTACGCATGCCTGGAAGTGTTTTTTTT-TTAGCGAGAGCTTCATTGCACTT
GCGTGGAAGTGGAAGCAGACATTCGCGTGCGTCACTCATGGCCTCATGTGGCCAAAAGGCAGACCTTTTCATGACGCCAC
GTGTACGCCTACGGTGGTCTCAACCGTTTCTTGG--AAGTAGTTGGGCACCTCGGCTCCATTTTGTCCTTGTCTCTCGGC
TTGTTTGGCTGGCGGCGAACAGAAGTCGCAGGCGGTGCTCACCTGGGGCAGTTCGATCTCCCGCTGGACGCCAACATGGC
CTCAGTTCCACGATAGCAG-CTGCCGGCCTCACCGCAGCCATCAATTCTCATCTTTTT-GTCGGCGGCCGGTTTTTCAAC
TTAGAGCGTCTATAGCCGGACTCTTCAAACTCCCTCTATA----------------------------------------
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>chr7B_287
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-------------------------------------------------TCCCTGTTGAACGCTAGGTCAAACCAGACCC
CTGTCAAGTGCCTTGGCCCCCAAGGCGTTTCCCTGGTCAAAGTAAACCGTATTTCCACGTGTGTGAACATATGTCGAGCT
CCTTATA-------TATACATA-----GAATTTGTACAAAAAAAAA--------GTCTGTTTCAAGAAAAATAGAAATGT
ATTTTTGTTGCAGACA---ATAGGTACATTGTACGTACAACTCAAAATATGTGGGAGATTCATGGATATATGCATGTATC
TGTTCCCGTGCG---TGCTCTGTTCAAGACGCGCGACACGCTCGTGCCTTCGACGCTTCTTCGTGCGCGCGCAGTTTGCT
ACCTCTCCATGCGCGCGCGCG----CGCACGAACGCACCGCCG-GGTAGGAAGAAGAACGGATCGCTTTCGTTTCGACGA
TGGAATTCTACGACGGAATGCGAGATACCGACCGCGCGCGCTCGCCGGCCCTGCGTGCCGCGCGCAT--TGACTTTTCAT
CAAACGGGACG----CGCGAAAGCCAAGTCGCCGCACGTAACCGGCATGCAACTTCCTGCCTAGTCTCCACGCCTCGCTA
GCTCCATCGACCGCCTCTTCGCTCCTGCCTGCGTTATATATAGGCGCGACCCGTTCATTCCATAGCTACTACCACCTCGT
TGAAGAATTACATCTCGACGACATTGCCAAAACCCAGCGTCGTGCAGCCCCCCTACAAGCTTGTTGCAAAGGGAGAAGAG
AGAGACAGAAGAAGAAGAAAGCCAAGGTTGACGAGATCGATGGCCGTCTTGAGGAGGACGATGAAGCTCGCTCTGCCGAT
GATCGTGGCGGCGTTCCTACTTCTGGCGGTGCTCGGCGA---GGCGCGGCCGCTGGGCGGCGCCGACTGGGCGGCCGCAG
GAGGGACCCCGCTGCCGGGCGCGT---CGACGACCATGGCCCAGGCGCTCCGGCGGCTGTACACGCAGCGGCTGACCGGG
CCTGGCGCCTCGTGCACCACCAACAGCCCGAACGTCCCCTGCCCGCCGTAGAGGCCGGGCGGCC-GGCGGCGCGACTCGG
CCGTCCTCCACGACCACCCCTTCCTCTCTCGG------------------GTTTTTGACGGACCAGCCCGGGCGGTGGTG
GCGGGCTCACAGTGTTCGCATGTTCTTTTTCCCTAGCTAGG-----------------------------ACATGGTTGG
ATTGATTGAATTCGTTGGTTGGTTTCTTGGAGATCTTTTTGTTGCCCGCGCGTGCTCTTCGC------CGGGTGTTGATT
TGTACAGAAGAAAAGATACTCGTATACT-----TGGTAGGATCTGTTCA--TTTGAATAAAACATAGGCAAGGTGCAAAA
GTGCGCCAGCAACACATGTATATTCCTTTCTCTATAAAGTGTTATATTTT-----------GTGATCAATTGTCAAATCT
TGACAAAGCACAGTTTACAGTTATGTACTCTAACTCAAAAAAAAAGTTAT--------TGCTCCGATTTTGATTAGTGGA
TCAACAAAAACGTGTCAGCT-------GTGTACGCATGCCTGGAAGT--TTTTTTT-TTACAGAGAGCTTCATTGCACTT
GCGTGGAAGTGGAAGCTGACAGTCGCGTGCGTCACTCATGGCCTCATGAGGCCAAAAGGCAGAACTTTTCATGACGCCAC
GTGTATGCCTACGGTGGTGTCAACCGTTTCTTGGAAAAGTAGTTGGGCACCTCGGCTCCATTTTGTCCTTCTCTCTCGGC
TTGTTTGGCTGGCGGCGAACACAAGTCGTAGGCGGTGCTCACCTGGGCCAATTCGGTCTCCA-CTGGAGGCCAATATGAT
A--AGTTTCACGATAGCTCTCTGCCGGGCTCACCGCAGCCATTACTACTGATATTTCTCGTCGGCGGCCGGTGTTACC-C
TTAAAGCATCTACGACCGGGCTCTCCAAACCCTCTATATGCCCGGGCGAACGGCCCAGTCACTGGCCGAAAACCTGACAC
AGACGGATTTCCGAGAACTCGATTAGAGATGCCT
>SNPs
-----S----------------S----------S--SSSSSSSSS----------S---------S------S-------
----S--------------------------------S-----SSS---SSS-------------------S----S---
---------S--------------------------------------S------------------S--S--S-----S
--------------S-------------S-------------------S-------------------------------
-----S----------------------------------------------------------S---------------
--SSS--SSSSSSS-----S----S-------------S--SS-------------S----------------S------
-------S-----S---------------------S--------------------------------------------
-------S----SSS----------------S------------------------------------------------
-----------------------------------------S--------------------------------------
-------------S-------SS--------------------------------------------SS-----------
-----------SSSS-----------S-----------------------------------------------------
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S----------------------------------------------------------------SS-------------
---------------------------------S--------------------------------------S-------
-S-----------S-S--S-----------S--------SSS--------------------------------------
------------------------SSS------------------------------------------------S----
--S--------------------------S----------------------------------S-------S---S---
------------------------SSS-SSS---------------S------------------------------S--
---------------S------------------------S-------------------------SS----------S-
----S----------------------------------S--------------S-------SSSSSS------------
--------------S-----------------------------S--S-SS-----------------------------
-----------------------------------------S--S--S--SSSSSSSSSSS-----S-S-----------
-S-------------------------------------S------S---SS-----------S-----S----S-----
-----------------S--SSSSSSS---S----------------------S--S---------S-------------
-------------------------------------S---------------------------------S--------
-----------------S-------------S---------S--------------------------------------
-------------------------------------------S-----------------------------S------
----------------------------------S--------------------------------------------S
-----S-----------------------------------SSSS-SSSSSSSSS-SSSSS-SSSSSSSSS-------S-
-S-S-S-----S-----S--S-------------
>forward_1026
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----------------------------------------------AGCCCCCTACAAGCTTGTTC--------------
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>reverse_2032
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-------------------------------CGGAAGTAATTGGGCACCTC-----------------------------
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