>input_sequence_85990
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-----------------------ATGGAGGCTTCACGCAAGCTCCTCTCGGCGGCGCTCCTCCTGGTGCTGCTGCTGGCG
GGCACAGGGGAGATGGGAGGCCCGGTGGCGGTGGCGGAGGCGCGGACGTGCGAGGCGAAGAGCCACAGGTTCAGGGGCCC
CTGCGTGCGCCACCACAACTGCGCCAACGTCTGCAAGACCGAGGGCTTCCCCGGCGGCAAGTGCCGCGGCTTCCGCCATC
GCTGCTTCTGCACCACCCACTGCCGGCAGTAA------------------------------------------------
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>chr4B_1_TraesCS4B01G324100
TGTGCCGTCGTGGCTTCTATACAGCTGTTTGCAGGTTGGCTTTGAGGTTGGAGCTCTATGGTGAAGTCGGAGTCGCTCGT
TCGAGGCAATCGGTGATGACGATGACGCTTGCGACTCCTCGGCGAATGCCATTCTTCTTTGCAGCTTTGTGTTCCATGTC
GGTGGCCTGGTTGGCCGGTGATGCCCATGTCAGGTGGGTTGAGTTGTATCGGTTTTAGCCCGGTTTTTCGCAAATTAACC
GGGCAATTCTCTCTTCTTCTTAATCAATGAAAATGGCAAATCTTTTGCCTCGTTTCAAAAAAAAAAAACAACA-------
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-ACAAATGAAGCAA-GACTAAAACTATAAATTCAAGAACTTGTAGGGGTCACATGGACCGCTGGAAAAAATTTG-TACCT
TGAGAGCTGTGATATTTTTAAAACAAGATCAGCCAGGAATAGCTCTTAGCAACATATTTTTATAGAAGAAAATCTCTAAG
CATCCGGCAGAGTATACCGCTTT---------------------------------AGCATATGTACAAATCTACAAAAC
ACACAATAGGTGGTATTTAAAATTAAAATGTATGGAAATAAATGGTCAAAGTGTAGCACGCATCTCAAAGCTCGCCCCGA
CGCTGGATTC-TTTGGTGTTGCCTACCGGGTGGGCACCCTAGAAAAATCGTGTTCGTGTCCACCGGCCGAATCGATGCGT
TTATGATCAACCGCTCGCCGCTCCCTACCCTTGCT-AGCTCACGGCAATCCGGTCGTCGTCGTCGTCA---CAGACCACG
TGAG-TTTTCTTGTAGTAATCCATGGCGTCGCCGGATCGACCTTTGGCTCTTTCCACATA---CTACCTACCTAATTGCG
GCACATATTTGTCGCCTTTTTCATTTGGATGCAACTGCATCGCGTTCGGTTTGACCC-ATGGCTTCGGCAGCTTGTGCGC
GCCGCTACATTATAAGCAGGTGCGCTCA--CACAACTAGCAGCTCCATCACTCCACCACCACCCTGATACACTCATAACA
AGCAGTGATCG--G------TCGATGGAGGCTTCACGCAAGCTCCTCTCGGCGGCGCTCCTCCTGGTGCTGCTGCTGGCG
GGCACAGGGGAGATGGGAGGCCCGGTGGCGGTGGCGGAGGCGCGGACGTGCGAGGCGAAGAGCCACAGGTTCAGGGGCCC
CTGCGTGCGCCACCACAACTGCGCCAACGTCTGCAAGACCGAGGGCTTCCCCGGCGGCAAGTGCCGCGGCTTCCGCCATC
GCTGCTTCTGCACCACCCACTGCCGGCAGTAACCAACCTATTGCCTCTACTT----CGTACGTCCGCCTAGCTGCAGCCT
GCCTGCGTGCATCCTGGCTTGCTCGCACCTCTGTGCGTCTATAGTAGTTAGCAC----TGTGTCCATGAATAAACCTCGG
CCTGTCTGTCATGGCATGCTGAAATGGGTATAAGAAACGCAGGCTCTCTTTTACTCTATATTAACTAGAAGAACGCCCGT
GCGTTGCAACGGGGCCACATTAATTTTAAGAATTCAATATTACGACATTGATGATCTTTTTTACCATCAAATCCTCACAC
ACACAGACACACACTCTCCCTCCCTCTTCCTCACTCTCTATCCCCCTCTCCCTCTCTCTCTAACACACACACATATCTAT
CTTATTGGGTACGGGACCATAATCCATCTATTTCACAGATACACGCTACTGCATAACAATATGGATTATGTGTATTATAT
TTGCCACCAGAACCGAGGAAATTAATTTCATGTAAATCGACCAACCACAGCTCCAAGAATACGCGGACGAGGTGGCTCGG
ATCGGTGTCGGCGCCGTCCAGCGCGGACCACGGACCCGCTACCAAGTGCACGTACAATGCACGTCTTCACAAATATTATA
ACCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCC-AAAAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAAGAATCTTGGGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATCTAAATAACAAATCCATTAACTATGCAGGCA
GCAGGCTTGTTACAACATAGAGAGATAGGAAAATGTCACCTCCAGTAATGTAGCGCAAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTCTGTTCTTCTCCATGTACATGGATCAGTAGTAGAGGCCAAGTATATAAGTACTTGACTGAACTCCACTCT
T
>chr5A_309
GCAAG---------------------------------------------------------------------CTCGTC
TCCGCCGCGCTCCTCCTGGTGCTGCTGCTCGCGGCGACGGGGGAGATGGGAGGCCCGGTGGCGGTGGCGGAAGCTCGGAG
GTGCGAGTCGCTGAGCCACAGGTTCGCGGGCCTCTGCCTGCGCGGCCACAACTGCGCCAACGTCTGCCGGACCGAGGGCT
TTCCCGACGGGAAGTGCCGCGGCGCCCGCCGCCGCTGCTTCTGCACCACCCACTGCCGCTAGTAGCCTAGC----TGCAT
GCATGCTGGCACCTTTGTGCGTGTGCCGTGTCCGTGTCCATGAATAAACCTAAGCTTGTCTCTCCTG-------GCAGGC
CGAGCTGGGTATAAGAAACAACTTGTGCTTGTGTCCGTTCGATGTTTGGGTTCGTCCTCAAAGTTGCAGTGAGGTCCCAT
GTTTCCTTTCACTTGTGTTGTGCGCGTGTAAGCGTGTTCCCTCGGTCACTCACTTGCTCTGCACACGAAACGACGTGCAT
GTCCCATGCTACTTCCGTCTGATCGAT-GCATGTTTCTTTGTTTGTTTGAGAAATGTGTGATCGAGGCATGTGTGCAGCA
AGGAACGCGACAGCTGACACGTACCCGGCGCTGCTCAATGCTCATGCACGATGGACTGGCCACGCGTAAAAGGTCCCGGC
GTCTAGTGGCGCGAAGTTATAAAAAAAATAA------------------------------------------------A
TCTGTGGAAACATGTATATGTGCACTACGGATCCGTGAAATTTTGTTTTGAAAAAATGTAATGTGTAAGCTGTACAGAAA
AAATATCTGGCCCAAAAGAAAAAAGAGGCCCATTTGAAAAATACATATTTCTCTTTTCTTTGTACG--------------
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--------------------------------------------------------------------CCACATGTGAAA
GTAAAATGTTGTGAAATTTTGCAAAGGACAAAATATACATGTGAGTGTGTTTACAAAAGATTCCAATTTTTTCGGTGCTT
CAGCCGCGCTGGTTAAAGGCGTCTCTGTATGTAAACCAACTGGGCCGACCTATAACGCATTGAAACATTCCTGATTTTTG
TGCAGCTTTGTGGCCACTTATAGGAAGCTTCTAGAAGCATCAAACCATTTTTGGGAAGCTTCTGACCGGA--TTTTTCTT
TGCTTGCCTTTTTATTTTCACTTTTCATTTTCCTTTTTTCTTCATTCTGCATTTAATGTGTTTTAAACACAAATTAAAAA
AATCAGA-----AACTTTTTGAAATCCTTGAACATTTTCCAAATTGGTTA-TTTTTTTTAAATTCGTGAACATATTTAAA
ATCCAGAAGCATTTTTCATATTCATGAACTTTTCCAAAACTGAACTATTTTTGCAATCATTGTTTTTTCTTTAAATTTGC
GATTTTTTCTGGATTCATGAACTTTTTTCCGAGCCACAATTGTTTTTTTCAAATTTGAAAAAAGAAACTATGTTCAGTCC
AAAAGTCAACGGTCAACTGGTCGACCAGGTCAATCATGAAGAGTGACTAGGCGTGTGCGCTTGATGAGTGAGCTGCTCGC
TCGCATAGCTAGCCCAGCCCACACAAGGGGGCACGTGAGCGCTGCCTCGCTACCAAGCGCAACGAGCGCTAATTAGGAGC
TTTGACAGCAAAAACCATAGCTGGCTTCTCTCTTATTGACGAATTGGCACAAAATGGCCCCTTCTGAAGAAATCTAAGCC
CAAGAGGCCCCTATAATTCACCTATGGACGGACCCCCTTCAGGGGAGGATTGCGGTTCATATATTAACTTTGTCAGTATT
GTCACAATTTTATGAGAACGGCGTTTCGGTGCCCGGGTGCATCTGCACCCGGTCAAAAAAAATTCATAAAAAATTCAGAA
AAATTCAAAACATTCCAATTTTTTTTGGGTGGTAGACAATTTGATGCGTGAGGCACGCTTCAATTTTCAAAACATTTGGA
CTTCTGTGCAGCTCTCAGCAAAAAAGAAAAATCAGACCAGAACAGTATATGAACAGTACACATTATTACAGACCTACGAT
TTGTCTTTTTTACCGAGAGCTGCACAGAAGTCCAAATGTTTTGAAAATTGGAGCGTACCTCACGCATCAAATTGTCCACC
ACCCAAAATTTGTTTGGATTTTTTTGAATTTTTCTAGTATTTATTTTAATTTTTTTTGTGAGCGCAGGTGCAGATGAGCT
CGGGCTCAGATTCGAATTTTCCCAATTTTATCTGCTACTTGTGTCCGACGATCAAAATTGGTCCATATATTGTCACATAT
AAAGTAAACTAGATAGTTGGTTGTGCATTGTAATGAGGCGCAATATTTTCCACCCAACCGTTGTCATTTATCGAACATTT
TATTGTTATATTATAGTTACATACTAAATGTCGCAATTGAATCAGTAGTTATTGATTTACCAAAGAAAACATGATTCTAT
TAGTTAAACCAATAAGGCGTGGACCAGTTGAGGCGGTTCAAAAGAAAATCGATGAGATTTTTTTTAATAAAACCTTGTGT
TCATTTTAAGTAGGATAGATGTTGCCACATTTTTCTAAATTGTTGGGCTCAGATCAGGGGGGTTGCTGCAAATCAAACAT
GCGGCAACTCTAACGAGCTTGCAAAACTGGTTGTGTGACAAAGTATTGCAATCTTATTACACCAATTAATTAAATATGTC
TACATGCATCTAGCTGTCACCAAACCAAACACTCGCCTTTTGCCTATGTGTTTCATCCCTCAGATTTTATTATGCCACGC
ACGACTCAATATTTTTCTTTGACTTTTTTGCTGTGATACATAATAATGATCACAAAAATAAGCTTTGACTATAATATGGA
TTTTCACTAAACAAGATTGAAAGAGTGAAAAATCACTCCCTCCTATATCTCCAATCCTCACATACGCAACGAATATAGAT
CGGTCTAAGTATCAGAGCCAAGCATTCCGAACTAAAAAAAATTGAAGGAGCGTAAACATCAAGAACCACCATCACCCAAA
AACAAATGAAACAAGGACTAAAACTATAAATTCAAGAACTTGTAGGGGCCACACGGACTGTTAGAAAAAAATTG-TACCT
TGAGAGCTGTGATACTTCTAAAACGAGATCGGCC------AGCACTAGGCGGCATATTTTTGTAGAAGAAAATCTCTAAG
CATCCGGCAGAGTATACCGCTTTAGCATATGTACAAATCTATTCCTTTTTTACGGGAGCATATGTACAAATCTACAAAAC
ACACAATAGGTGGTAGTCAAAATTAAAATGCATGGACATAAATGGTCC-AGTGTAGCATACATCTCAAAGCTTGCCCCAA
CGATGGATTCATTTGCTGTTACCTACCTGGCGGGGACGCTAGAAGAATCGTGTTCGTGTCCACCGGCCGTATCGATGCGT
TCGTGATAAACCGCTCGCCGCTTCCTACCC--GCT-AGCTCACAGCAATCCAGTCGTCGTCGACGTCG---CAGACCACG
TCAG-TTT-CTTGTAGCAATCCATGGCGTCACCGGACCGACCTTTGGCTCTTTGCACGTACTCCTACCGACCTACTTGCG
GCACATATTTGTCGCCTTTTTCATTTGGATGCAGCTGCATCGCGTTCGGTTTGACCCCATGGCATCGGTAGCTTGTGCAT
TTCGCTGTATATAA-GCCGGTGTGCTCACGCAC----AGCAGCTCCATCACTCCACCACAACCCTGATACACTCATACCA
AGCAGTAATCGATG------TCGATGGAGGCTTCACGCAAGCTCCTCTCGGCGGCGCTCCTCCTGGTGCTGCTGCTGGCG
GCCACGGGGGAGATGGGAGGCCCGGTGGCGGTGGCTGAGGCGCGGACGTGCGAGGCGAAGAGCCACAGGTTCAGGGGCCC
CTGCGTGCGCCACCGCAACTGCGCCAACGTCTGCAAGACCGAGGGCTTCCCCGGCGGCAAGTGCCGCGGCTTCCGCCACC
GCTGCTTCTGCACCACCCACTGCCGCCAGTGACCAACCTATTGCCTCTACTTCGTCCGTACGTCCGCCTAGCTGCAGCCT
GCCTGCGTGCATGCTGGCTTGCTCGCACCTCTGTGCGTGTATTGTAGT----AC----TGTGTCCATGAATAAACCTCGG
CCTGTCTGTCATGGCATGCTGTGATTGGTTTAAGAAACGCAGGTCCCCTTTTACTTTATA--------------------
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>chr4D_309
AGCAGCTCCGTCACTCATCCCACCCTGATACCCTCGTAACAAACAAGCAGTCATCGATGGAGGCTCCACGCAAGCTCGTC
TCCGCCGCGCTCCTCCTCGTGCTGCTGCTCGCGGCCACAGGAGAGATGGGAGGCCCGGTGGCGGTGGCGGAAGCTCGGAA
GTGCGAGTCGCTGAGCCACAGGTTCGCGGGCCTCTGCCTGCGCGGCCACAACTGCGCCAACGTCTGCCGGACCGAGGGCT
TCCCCGGCGGCAAGTGCCGCGGCGCCAGCCGCCGCTGCTTCTGCACCACCCACTGCCGCTAGTAGCCTAGCTGCATGCAT
GCATGCTGGCACCTTTGTGCGTGTACCGTGTCCGTGTCCATGAATAAACCTCAGCTTGTCTACTATCTTGGCATGCAGGC
CGAGCTGGGTATAAGAAGCAACTTCTCCTTGTGTCCGTTCGATGTTTGGGTTCGTCCTCAAAGTTGCAGCGAGGTCCCAT
GTTTCCTTTCACGTGTGTTGTGTGCGTGTAAGCGTGTTCTCCCT----CTCACTTGCTCTGTACACGAAACGACGTGCAT
GTCGCATGCTACTTCCGTGTGATCGAAAGCATGTTTTTTTGTTTGTTTGAGAAAAGTGTGATCGAGGCATGTGTGCAGCA
AGGAACTTGACAGCTGCC----ACCCGGCGCTGCTCAATGCTCATGCACGATGGACTGGCCACGCGTAAAAGGTCCCGGC
CTCTAGGAGTGGGAAGTTATGGTCACGGGCACCATGGTCCCCTTTATTAAAAAAAAACATATTAAGAAGTAAAAAAATTA
TCTGTGGAAACATGTATGTGTGCACTACGGATCCATGAAATTTTGTTTTGAAAAAATGTAATGTGTAAGCTGTAAAACAT
AATCTGGCCATATACTGATTGACTTTGTTCCATCGTTGAAAACCTCGTATATATTCTGTATATTCGATCTAAACCATTAT
GATCGTGCGTTAAGCAAGACTTGACTTGTTGCCATGGAGGAGAAAAGAATTGCTTGGAGGAGTGATTTTGCATCTCCCTA
GCTACAAACTGCATGGGTAGTGACCCAGATGAAGCCAAGTTGCAAGTCCGTGCAGTTATTATGGCCTAATTAGTAAAGTC
AAACACGAGTGTCCTATGAGCAGAGTTCTGTATACTGTCTGAATATCGCTAGGCTGTTTCTGCAAGTTACAAAGGGCATT
TTGGTTTGAGAGTTATGCATCGGCCCCATGTGTGTTTCATACTACCGTTGATGAGGAATCCCCACATCATCACACCGAGA
TCATGGTAGGGTCTTGAGCAACATGATGAAGGACTCATGCCTCGGCAGAGTAATCAATTCGTTGATGCGAATTAGGTGGC
TCATGGGGCCTCTGGTTTAGCCAGTGGAGTGCCATAATTGAGCGTCACTGCCCTAACAGACGCATACTGTCAGGCTCGTC
AGCAACCTTCCAGAACACGATGGGCTGGGCGTTATGATTACCGTTTAGGCCAGACAAGGACAAGGACGGCCTCGTTAGTA
GTAGAAGACACCAACCAAGTAATTATACTACGTAGTAGACAGCCATGTCTTGTGAAACTCTTAAGTATCCACATGCGAAA
GTAAAATGTTGTGAAATTTTGCACATACAT-AATATACATGTGACTGTGTTTACAAAAAATTCCAATTTTTT-GGTGTTT
CACCAGCGCTGGTTAAACGTGTCCCCGCACGTAAACCAACTGGGCCGGCCTATAATGCATTGAAACATTCCTGATTTTTG
TGCAGCTTTGTGGCCAATTCTAAGAAGCTTCTAGAAGCACCGAACAATTTTTGGGAAGCTTCTGACCGATTTTTTTTCTT
TTCTTGGTTTTTTATTTTTATTTTTTATTTTCCTTTTTTCTTCATTTTTCATTTAATGTATTTTAAACTCACATTTTCAA
AAACAATTCAAGAACTTTTTGAAATCCATGAGCATTTTTCAAATTGGTGATTTTTTTATAAATCCGTGAACATATTTAAA
AT--------ATTTTTCAGATTCATGAACTTTTCGAAATCTGAATTATTTTTACAATCATTGTTTTTTTT---AATTTGT
GATTTTTTTAATTCATG---ACTTTTTTTCGAGCCACAATAGTTTTTCAAATATG----AAAAAAAACTATCTTTAGTCC
AAAAGTCAACGGTCAACCGTCCGACCAGGTCAACCATGAAGAGTGACTAGGCGTGTGCGCTTGATGAGCGAGCTGCTCGC
TCGCATAGCTAGCCCAGCCCACACAAGGGGGCGCGTGAGCGCTGCCTCGCTACCAAGCGCAACGAGTGCTAACTAGGAGC
TTTGACGGCAAATACCATAGCTGGCTTCTCTCTTAGTGACGAATTTGCACAAAATGACCCCTTTTGAAGAAATCTAAGCC
CAAGAGGCCCC--TAATTCACCTATGGACCCCCTC----CAGGGGAGGATTGCGGTTCATATATTAACTTTGTCAGTATT
G-------------------------------------------------------------------------------
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-------------------TCACGATTTCATCTGCTACTTATGTCTGCCGATAAAAATTGGTCCATATATTGCCACATAT
AAAGTAAACTAGATAGTAGCTCGTGCATTGTAATGGGGCACAATATTTTCTACCCAACCGTTGTGATTTATTGAACATTT
TATTGTTTTATTATAGTTACATACTAAATGTCGCAATTGAATCAATACTTATTGATTTACCAAAGAAAACATGATTCTAT
TAGTTGCTG-----------------------------------------------------------------------
---------------------------CATTTTTCTAAATCGTTTGGCTTAGATTAGGGGGGTAGCTGCAAATCAAACAT
GTGGCAACTCTAACGAGCTTGCAAAACTGGTTGTGTGACAAAGTATTGCAATCTTATTATACCAATT----AAATATGTC
TACATGCATCTAGCTGTCACCAAACCAAACACTAGCTTTTTGCCTATGTGTTTCGTCCCTCGAATTTTACTATGCCACGC
ACGACTCAATATTTTTCTTTGACTTTTTTGCTGTGATACATAATAATGATCACAAAAATTAGCTTCAACTATAATGA--A
TTTTCACTAAATAAGATTGAAAGAGTGAAAAATCACTCCCTCCTATATGTCTAATCCTCACATATGCAACAAATATAGAT
CGGCCTAAGTATCAGAGCCAGGCATTCCAAACTAAAAAC-ATTGAAGGAGCGTAAACATCAAGAACCACCATCACCCAAA
AACAAATGAAGCAAGGACTAAAACTATAAATTCAAGAACTTGTAGGGGCCACACGGACTGTTCGGAAAAAAAAAATACCT
TGAGAGCTGTGATATTTTTAAAACGAGATCAACCAGCACTAGCCCTTAGCGGCATATTTTTATGGAAGAAAATCTGTAAG
CATCCGGCAGAGTATACTGCTTTAGCATATG-ACAAATCTATT---TTTTTACGGGAGCATATGTACAGATCTACAAAAC
ACACAATAGGTGGTAGTTAAAATTAAAATGTATGGCCATAAATGGT--AAGGGTAGCACACATCTCAAAGCTTTCCCCGA
CGCTGGATTC-TTTGCTGTTACCTACCGGGTGGGCACCCCAGAAAAATCGTGTTCGTGTCCACCGGCCGTATCGATGCGT
TTCTGATAAACCGCTCGCCGCTCCCTACCCTTGCTAAGCTCACGGCAATCCAGTCGTCGTCGTCGTCGTCACAGACCACG
TGAGTTTT-CTTGTAGCAATCCATGGCGTCGCCGGATCGACCTTTGGCTCGTTGCACGTACTCCCACCGATCTACTTGCG
GCACATATTTGTCGCCTTTTTCATTTGGATGCAGCTGCATCGCGTTCGGTTTGACCCCATGGCTTCGGCAGCTTGTGCGT
GCCGC--TACATAA-GCTGGTGTGCTCT--CCC----AGCAGCTCCATCACTCCACCGCCACCCTCGTACA---------
-----------------------ATGGAGGCTTCACGCAAGCTCCTCTCGGCGGCGATCCTCCTGGTGCTGCTGCTGGCG
GGCACCGGGGAGATGGGAGGCCCGGTGGCGGTGGCGGAGGCGCGGACGTGCGAGGCGAAGAGCCACAGGTTCAGGGGCCC
CTGCGTGCGCCACCGCAACTGCGCCAACGTCTGCAAGACCGAGGGCTTCCCCGGCGGCAAGTGCCGCGGCTTCCGCCATC
GCTGCTTCTGCACCACCCACTGCCGCCAGTAACCAACCCACTACCTCTACTTCGTACGTCCG----CCTAGCTGCAGCCT
GCCTGCGTGCATGCTGGCTTGCTCGCACCTTC-TGCGTGTATTGTAGT----ACTGTGTGTGTCCATGAATAAACCTCGG
CCTGTCTGTCATGGCATGCTGAGATGGGTATAAGAAACGCAGGTTCCCTTTTACTCTGTGTTAA----------------
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>chr4B_918
CAGGGGAGCTGGGAGGCCCGGTGATGGTGGCGGAGGCGCGGACGTGCGAGTCGCGGAGCCACAGGTTCAGGGGGCCCTGC
GTGCGCAGGTCCAACTGCGCCAACGTCTGCAAGACCGAGGGCTTCCCCGACGGCAAGTGCCGCGGGTTCCGCCGCCGCTG
CTTCTGCACCACCCACTGCCACCATTAACAAGCCTCTCCTTCGGGTGATGCCTTCTTTGGGGTGGCCTTTCTGCGAGCGT
CCGTGCGTGCGTGTCCATGAATAAACCTCAGCTTGTCTCGGCAAGCTAGGTGCGAGTCCCTTCTTTGTTTTTTGTATGAT
TATTGCCAGTGTTTGTTTCTTGTTGGGTTCGTCCTCAGAGTTGCTGCGAGATTTATGGGATTATCCCAGTCAATCCTTCT
GTCATGTAAGATTTTATTTTGGGCAAATCATGAGTGTTGTATGCCTGTTCCCTCAGTAACTCACTCGTTGTGTATACAAT
TGGACAGGCATGTCACATGGTGCCTGTAGTTGTGATGTGCATGCTATACCTCCGTGTGATCGAGATCGATCCATATGATC
GATGCGCCATGTGTGCAGTGGCAGCTGACACCCGGCGCTACGCATGCGCAAGGACCGCTGCGAGACCTGAGCATTTCTTG
GGCCGGGCTTTAAAAAGCCGAACCCCACAAATCTAAGCCTGAGCCATGCCCGGTCCTGAACAAACGAACACTATTCTATT
TTTCTCAATCCTTTTTCCGGTAGTGAATACTACCTCCCTCCCAGTTTATTAGACCCCTAGTATATTGAGTCAAACTTTGA
CCATTGACATGACTAATAAAATATAGAATACATGCTTAAAGTAGTACAATGTTGGATTTGTATTTGAAAGAGCGTTCGGA
AGGTATAATGTTTGTGACGTATAGTTTACATGTTATTAGTTAAAATTGTGAGTCAAACTTTAATCTAAAATAAGAGGGAG
CCTAATAAACCCGGACGGAGGTAGTAGTACTTATCTTTCTATTGAAATTACGTAATTTATTCATTTTCAAGATATATTAA
TACATTAGTATGATTTTTTTAATGAAACCTTATTTTTAGTTTTTTAGAACCACAATATAGGCCAGAAGCTCACAATCACT
ATATATGTGGCAATTTCCCAAAAGAAAAAACCCATGTGTGCCAACATTTTTTAGGAAAGATATTTCTTTCCATTTCATTA
ACGAAACCCCCGCATGTTCTTACAAGATACAAACTGCTAAAAGAGCCTGGAGGCCTTTAATTTGAAAATTTTCAAAATCC
TATTTTTTTTGTTTCAAAAAATTCTGAAACAACACACATGTATGCAAGGATGTAATGTGTATGTGTGTAAAAATTCAGTA
TGAAATATCTTGATTTACGAGCTGCAAATAAATTTAATGGAGTATGAGGATGAAGAATACATATGCTAAAAAGCCCCAGA
TTTTTTTCTGTAGCTCTCATTTAAACCTATTTCGATCTGAAAATTTGCACACATGTACATTATGTGTATTACGTGAATTT
GTTTTCAGAATTTATTGAAACTGAAATACGGTTAAGTGTACGCATGAGCCTACAAAATACGTACAAGGTATTTGTAAATG
ATAAAAGTACTACAACAAACAACTCAAAACAGGTGTTCGACGTGGACCTCTTTTGTTTTGCAGGAACATGGGAATTATTA
ATGTACAGTAATGCCTTTTACAATCATGATTGAGCAACTCGGCAAAAAACAAAGTGGCCTCAAGCGGCCAAACATTGGCC
TCTACACCCGCTCCTAGCACCAGCAGCTTGTGCAAGTTGGCGAGCTACCCTGTGTCCTCCTCTATTAACCTGAACCGAAA
TTCAGGAAGTTCAGCCGCAGTATCTCTAACATCAGGTAGCAGGCGATAATACTACACGCACACGGAAAGAATCGACAGAC
TTTCACGGAATCCACCTCACCTAACCAAATCCTAGCCAATCAATTTCTAACTACACCGTAATCCCCCTGTAAATCCCCGT
GTGTCTAGCATTGCTCGATAGCAGGTGTGCATGGGCATGGCGCGACCATAACTTGAGAGCCTGACTCCACTTGAGGCCAA
ACTGTTCATGGCCGCCCATCCAGTCATCGGCGTCGCAGACCACGCGGATTTGTGTTGTAGCAATCCATCCGCCTTGCTTG
AACACAAAGTTCTGTTGGCAAGCTTCCAGCGCCGTGCGTGTCCTGGAGCAGCGGACGGTAGCAATTGAAGCACGCGCGTA
CGTGGGATACTACCCTACGGTCCTACCCTACTTGCGGGTTGCGGCCTTTTCCTCTTTGAGAAGACGTGCACTCCGACTGC
TGCATCGATCGTTGTGACTCGTGGGACCCTATTGGCATCGCGT-------------------------------------
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------------------------------------------------------------------------------GT
GCCGC--TATATAA-GCTGGGGTGCTCA--CAC----AGCAGCTCCGTCACTCATC--CCACCCTGATACACTCGTTAAC
TCGTAACGAACAAGCAGCCATCGATGGAGGCTCCACGCAAGCTG-TCTCCGCCGCGCTCGTGCTGGTGCTGCTGCTCGCG
GCCACGGGGGAGATGGGAGGCCCGGTGGCGGTGGCGGAGGCTCGGAAGTGCGAGTCGCTGAGCCACAGGTTCGCGGGCCT
CTGCCTGCGCGGCCACAACTGCGCCAACGTCTGCAGGACCGAGGGCTTCCCCGGCGGCAAGTGCCGCGGCGCCCGCCGCC
GCTGCTTCTGCACCACCCACTGCCG-------------------------------------------------------
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>chr3A_1408
GCAGCCATCTCATATATCAATA----------------------------------------------------------
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-------------------------------------------------------------TAACTAGAAGAACGCCTGT
GCGTTGCAACGGGGCCACATTAACTTTAAGAGTTCAATATTACGACATTGGCGATCTTTTTTACCATCAAATCCTCACAC
ACACAGACACACACTCTCCCTCCGTCTTCCTCACTCTCTATCCCCCTCCCCCTCTCTCTCTAAC--ACACACATATCCAT
CTTATTGGGTACGGGACCATAATCCATCTATTTCACAGATACACGCTAGTGCATAACAATATGGATTATGTGTATTATAT
TTGCCACCAGAACTGAGGGAATTAATTTCATGTAAATCGACCAGCCACAGCTCCAAGAATACGCGGACGAGGTGGCTCGG
GTCGGCGTCGGCGCCGTCCAGCGCGGGCCACGGGCCCGCTTCCAAGTGCACGTGCAATGCATGTCTTCACAAATATTATA
ACCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCC-AAAAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAAGAATCTTGCGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAAATAAAAAATCCATTAACTATGCAGGCA
ACAGGCTTGTTACAACATAGAGAGATAGGAAAATGTCACCTCCAGTAATGTAGCGCAAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTCTGTTCTTCTCCATGTACATGGATCAGCAGTAGAGGCCAAGTATATAAGTACTTGACCGAACTCCACACT
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>chr5B_1432
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--------------------------------------------------------------AACTAGAAGAACGCCCGT
GCGTTGCAACGGGGCCACATTAACTTTAAGAGTTCAATATTACGACATTGGCGACCTTTTTTACCATCAAATCCTCACAC
ACACAGACACACACTCTCCCTCCCTCTTCCTCACTCTCTATCCCCCTCTCCCTCTCTCTCTAACACACACACATATCCAT
CTTATTGGGTACGGGATCATAATCCATCTATTTCACACATACACGCTAGTGCATAACAATATGGATTATGTGTATTATAT
TTGCCACCAGAACTGAGGGAATTAATTTCATGTAAATCGACCAGCCACAGCTCCAAAAATACGCGGACGAGGTGGCTCGG
GTCGGTGTCGGCGCCGTCCAGCGCGGGCCACGGGCCTGCTTCCAAGTGCACGTGCAATGCACGTCTTTACAAATATTATA
ACCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCC-AGAAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAAGAATCTTGGGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAAATAAAAAATCCATTAACTATGCAGGCA
GCAGGCTTGTTACAACATAGAGAGATAGGAAAATGTCACCTCCAGTAATATAGCGCAAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTCTGTTCTTCTCCATGTACATGGATCAACAGTAGAGGCCAAGTATATAAGTACTTGACTGAACTCCACTCT
T
>chr2B_1432
--------------------------------------------------------------------------------
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--------------------------------------------------------------AACTAGAAGAACGCCCGT
GCGTTGCAACGGGGCCACATTAACTTTAAGAGTTCAATATTACGACATTGGCGACCTTTTTTACCATCAAATCCTCACAC
ACACAGACACACACTCTCCCTCCCTCTTCCTCACTCTCTATCCCCCTCTCCCTCTCTCTCTAACACACACACATATCCAT
CTTATTGGGTACGGGACCATAATCCATCTATTTCACACATACACGCTAGTGCATAACAATATGGATTATGTGTATTATAT
TTGCCACCAGAACTGAGGAAGTTAATTTCATGTAAATCGACCAGCCACAGCTCCAAGAATACGCGGACAAGGTGGCTCGG
GTCGGTGTCGGCGCTGTCCAGCGCGGGCCACGGGCCCGCTTCCAAGTGCACGTGCAATGCACGTCTTCACAAATATTATA
ACCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCC-AGAAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAAGAATCTTGGGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAAATAAAAAATCCATTAACTATGCAGGCA
ACAGGCTTGTTACAACATAGAGAGATAGGAAAATGTCACCTCCAGTAATGTAGCGCGAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTCTGTTCTTCTCCATGTACATGGATCAGCAGTAGAGGCCAAGCATATAAGTACTTGACCGAACTCCACTCT
T
>chr4B_1433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------ACTAGAAGAACGCCCGT
GCGTTGCAACGGGGTTACATTAATTTTAAGAGTTCAATATTACGATATTGACGATCTTTTTTACCATCAAATCCTCACAC
ACACAGACACACACTCTTCCTCCCTCTTCCTCACTCTCTATCCCCCTCTCCCTCTCTCTCTAACACACATGCATATCTAT
CTTATTGGGTACGGGATCATAATCCATCTATTTCACACATACACGCTAGTGCATAACAATATGGATTATGTGTATTATAT
TTGCCACCAGAACTGGGGGAATTAATTTCATGTAAATCGACCAGCCACAGCTCCAAGAATACGCGGACGAGGTGGCTCGG
GTCGGCGTCGGCGCCGTCCAGCGCGGGCCACGGGCCCGCTTCCAAGTGCACGTGCAATGCACGTCTTCACAAATATTATA
ATCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCC-AGAAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAAGAATCTTGGGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAAATAAAAAATCCATTAACTATGCAGGCA
GCAGGCTTGTTACAACATAGAGAGATAGGAAAATGTCACCTCCAGTAATGTAGCGCAAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTCTGTTCTTCTCCATGTACATGGATCAGCAGTAGAGGCCAAGTATATAAGTACTTGACTGAACTCCACTCT
T
>chr5A_1433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------ACTAGAAGAACGTCCGT
GCGTTGCAACGGGGTCACATTAATTTTAAGAGTTCAATATTACGACATTGACGATCTTTTTTACCATCAAATCCTCACAC
ACACAGACACACACTCTTCCTCCCTCTTCCTCACTCTCTATCCCCCTCTCCCTCTCTCTCTAACACACACGCATATCTAT
CTTATTGGGTACGGGACCATAATTCATCTATTTCACACATACACGTTAGTGCATAACAATATGGATTATGTGTATTATAT
TTGCCACCAGAACTGGGGGAATTAATTTCATGTAAATCGACCAGCCACAGCTCCAAGAATACGCGGACGAGGTGGCTCGG
GTCGGCGTCGGCGCCGTCCAGCGCGGGCCACGGGCCCGCTTCCAAGTGCACGTGCAATGCACGTCTTCACAAATATTATA
ACCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCC-A-AAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAAGAATCTTGGGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAGATAAAAAATCCATTAACTATGCAGGCA
GCAGGCTTGTTACAACATAGAGAGATAGGAAAATGTCACCTCCAGTAATGTAGCGCAAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTCTGTTCTTCTCCATGTACATGGATCAGCAGTAGAGGCCAAGTATATAAGTACTTGACTGAACTCCACTCT
T
>chr5B_1433
--------------------------------------------------------------------------------
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---------------------------------------------------------------ACTAGAAGAACGCCCGT
GCGTTGCAACGGGGCCACATTAACTTTAAGAGTTCAATATTACGACATTGACGATCTTTTTTACCATCAAATCCTCACAC
ACACAGACACACACTCTCCCTCCGTCTTCCTCACTCTCTATCCCCCTCTCCCTCTCTCTCTAACACACACACATATCCAT
CTTATTGGGTACGGGACCATAATCCATCTATTTCACACATACACGCTAGTGCATAACAATATGGATTATGTGTATTATAT
TTGCCACCAGAACTGAGGGAATTAATTTCATGTAAATCGACCAGCCACAGCTCCAAGAATACGCGGACGAGGTGGCTCGG
GTCGGCGTCGGCGCCGTCCAGCGCGGGCCACGGGCCCGCTTCCAAGTGCACATGCAATGCATGTCTTCACAAATATTATA
ATCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCCAA-AAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAAGAATCTTGCGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAAATAAAAAATCCATTAACTATGCAGGCA
ACAGGCTTGTTACAACATAGAGAGATAGGAAAATGTCACCTCCAGTAATGTAGCGCAAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTTTGTTCTTCTCCATGTACATGGATCAGCAGTAGAGGCCAAGTATATAAGTACTTGACCGAACTCCACACT
-
>chr2B_1433
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---------------------------------------------------------------ACTAGAAGAACGCCCGT
GCGTTGCAACGGGGCCACATTAATTTTAAGAGTTCAATATTACGACATTGGCGATCTTTTTTACCATCAAATCCTCACAC
ACATAGACACACACTCTCCCTCCCTCTTCCTCACTCTCTATCCCCCTCTCCCTCTCTCTCTAACACACACACATATCCAT
CTTATTGGGTACGGGACCATAATTCATCTATTTCACACATACACGCTAGTGCATAACAATATGGATTATGTGTATTATAT
TTGTCACCAGAACTGAGGGAATTAATTTCATGTAAATCGACCAGCCACAGCTCCAAGAATACGCGGACGAGGTGGCTCGG
GTCGGCGTCGGCGCCGTCCAGTGCGGGCCACGGGCCCGCTTCCAAGTGCACGTGCAATGCACGTCTTCACAAATATTATA
ACCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCCAG-AAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAAGAATCTTGGGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAAATAAAAAATTCATTAACTATGCAGGCA
GCAGGCTTGTTACAACATAGAGAGATAGGAAAATGTCACCTTCAGTAATGTAGCGCAAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTCTGTTCTTCTCCATGTACATGGATCATCAGTAGAGGCCAAGTATATAAGTACTTGACTGAACTCCACTCT
T
>chr7A_1433
--------------------------------------------------------------------------------
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---------------------------------------------------------------ACTAGAAGAACGCCCGT
GCGTTGCAACGGGGTCACATTAATTTCAAGAGTTCAATATTACGACATTGACGATCTTTTTTACCATCAAATCCTCACAC
ACACAGACACACACTCTTCCTCCCTCTTCCTCACTCTCTATCCCCCTCTCCCTCTCTCTCTAACACACACGCATATCTAT
CTTATTGGGTACGGGACCATAATCCATCTATTTCACACATACACGCTAGTGCATAACAATATGGATTATGTGTATTATAT
TTGCCACCAGAACTGGGGGAATTAATTTCATGTAAATCGACCAGCCACAGCTCCAAGAATACGCGGACGAGGTGGCTCGG
GTCGGCGTCGGCGCCGTCCAGCACGGGCCACAGGCTCGCTTCCAAGTGCACGTGCAATGCACGTCTTCACAAATATTATA
ACCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCCAG-AAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAAGAATCTTGGGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAAATAAAAAATCCATTAACTATGCAGGCA
GCAGGTTTGTTACAACATAGAGAGATAGGAAAATGTCACCTCCAGTAATGTAGCGCAAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTCTGTTCTTCTCCATGTACATGGATCAGCAGTAGAGGCCAAGTATATAAGTACTTGACTGAACTCCACTCT
T
>chr7B_1433
--------------------------------------------------------------------------------
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---------------------------------------------------------------ACTAGAAGAACGCCCGT
GCGTTGCAACGGGGCCACATTAACTTTAAGAGTTCAATATTACGACATTGGCGACCTTTTTTACCATCAAATCCTCACAC
ACACAGACACACACTCTCCCTCCCTCTTCCTCACTCTCTATCCCCCTCTCCCTCTCTCTCTAACACACACACATATCCAT
CTTATTGGGTACGGGACCATAATCCATCTATTTCACACATACACGCTAGTGCATAACAATATGGATTATGTGTATTATAT
TTGCCACCAGAACTGAGGGAATTAATTTCATGTAAATCGACCAGCCATAGCTCCAAGAATACGCGGACGAGGTGGCTCGG
GTCGGCGTCGGCGCTGTCCAGCGCGGGCCACGGGTCCGCTTCCAAGTGCACGTGAAATGCACGTCTTCACAAATATTATA
ACCAGATGTGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATACCATACTCAATTGAATACCTAACCT
GGACAATACTCTTATTTCTATGCGCCAG-AAAAAATGGAATAGCAAAGCTAAGTATGCCTACATACGCTCAGATTATATA
TAGGAATCTTGGGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAAATAAAAAATCCATTAACTATGCAGGCA
GCAGGCTTGTTACAACATAGAGAGATAGGAAAATGTCACCTCCAGTAATGTAGCGCAAAGGAGTGGAACGAAGCATGAAT
GAGCGGTTGTCTGTTCTTCTCCATGTACATGGATCAGCAGTACAGGCCAAGTATATAAGTACTTGACTGAACTCCACTCT
T
>SNPs
S-S---S--------S---SSSSS-----SS-SS-S--S-SSS----SS-SS--SSSSS-SS-SSS--S-S-SSS-SS-S
---S-SSSS--SS-SS--S-----SS---S-----SS-SS--SSS---SS-SS-SSS--S--S-SS---S-SS--SS--S
-S-S-S--S-S--SS-S-SS-SSS-S-S-S-SSS--SS--SS-SSSS--SSS--S-SSSS--SS-SS-S--SSSSSSS-S
SS--SSS-SS--S---S-SSSS-S-S--S-SSS--S-SSSS-SSSSSS-S--S-S-SSSS-SS-SSSSSSSSS-------
--------------------------------------------------------------------------------
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------------------------------------------------S----S----S-S-S-------S---------
------------------------S-----------S-S----S------SS----------------------------
--------------------------------------------------------------------------------
---------------S--------------------S----------S-----------S------------S-------
---------------S----S------------------------------------------------S----------
--S----S-------------------------------------------S---------------S------------
--------S-------S------------------------------------S---S----------S-----S-----
---------------------------------S---------------------------------------------S
------SS--SSS-S--S----S----------SSSS-------------------------------------------
------S-------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
------------S-------------------------S---S-----SSSS----------------------------
----------------------S--------------------S--S---------------------------------
-------------------------------S-------------------S----------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
-------------S-----------------------------S------------------------------------
S-------------------------S------S------S------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S-------S----------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-
>forward_57
-------------------------------------GGCTTTGAGGTTGGAGCTCT-----------------------
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>reverse_5241
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----------------------------------------ACCAAGTGCACGTACAATGC--------------------
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-
