>input_sequence_85980
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----------------------------------------------------------------------------ATGG
TGGACAGGGTGACGAAGCTGGCATCGCAGCGCGTGGTGGTGATCTTCGGTGTGAGCAACCGCTTCATGTGCCATGTGGTG
AAGA--CGCTCTTCACGGAGCTGGGCGTGAGCTGGACGGTGCACAAACTGGCAAAGGACCCCTGGGGGAAGGACGTCGAG
AGGGCGCTTGCTGGCAT---------------------------------------------------------------
---GGTCATGACACTGCACCTTGGCGGCCAGCTTGTGCCGCTCCTCAGCCAGGCTGGTGCCCTCTGGCTCTGA-------
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>chr3A_1_TraesCS3A01G462800
TCCACCCATCATCACTAGTTCACTACTTCAGTTCTAAGGGAAAATTTGATACTCCCTCTGTAAATTAATATAAGAGCATT
TAGATCACTAAAATAGTGATCTAAACGCTCTTATATTAGTTTACGGAGGGAGTAGATGCCATTAGATGAAGTTTTATCCC
AATGGCAGCCAG-AACAAGAAGTGATGCT-TGGTGCCCACAAACTCCACAACAATGGTATTCCTCAT--CACGGACAAAT
AGCAAAAAAAGTAAATTAGAGTG---------CTAGCTTATCAGAAATCTGATTAATCATCAACTGAAGCATTGATTTGA
ATGATACCACCATCCATTTTTCTATATATGATAGTAATAACT--------------------------------------
--------------------------AAAGTTCAGCCTATCTCGAATCCTGACTCTTCTTCATTTTT---------AGGC
ATCATTACAAAAAAAAATATCAAAGATTAGCTACACTCCTGACCATAGCTAACTATATCACTTTGCTCCCTCACAAAAGC
AAAGAGTACACGAGGTGCTAGAATTCATTAGATGGAGTTTTATCCCAAATTCCCAATGGTGTCCAGAAAAAAGA------
-----------------------------------------------------------------------------ATC
CAAACCTAGCTTATCAGGAACTTGATGAATCATCAGCTGAAGCAGTGATTTCGTTCGGTACCACCATCCT-TTTTTCCAT
AGATATGATACTAAT------------------------------AGCTAAACTTCTGCCTGTCTTGAATCTCGATTCTT
CTTTAAAAATTACTTATTGAGCACATCATTAAAAATATTATCAGAGATTAGCCACTCTCCTGGCCATAGCTAAC--TATG
GTTTTGGCCCCTCCCAAAAGCAAAGATACAAAAGGTGGTAGAATAGAACCTTCCAACAGAGAACATATATTCTACCCAAT
CAGACACATCT---------------------------------------------------------------------
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--ATAAATAAGCACCGTTGGGTCATCAGCATCATAAAACACCAAGAA-ACAACAGCCTACATCTAGCTCAAGTGAACTGA
ACTGATCAGAT-G-ATCGACCACAAAGCCCCAAAAAACAACATCCTACAGCCAGCCACCAATTGGCTCGATCAGCAATGG
TGGACAGGGTGACGAAGCTGGCATCGCAGCGCGTGGTGGTGATCTTCGGTGTGAGCAACCGCTTCATGTGCCATGTGGTG
AAGA--CGCTCTTCACGGAGCTGGGCGTGAGCTGGACGGTGCACAAACTGGCAAAGGACCCCTGGGGGAAGGACGTCGAG
AGGGCGCTTGCTGGCAT---------------------------------------------------------------
---GGTCATGACACTGCACCTTGGCGGCCAGCTTGTGCCGCTCCTCAGCCAGGCTGGTGCCCTCTGGCTCTGAAGAGTCA
AGGACAACAGTGGCTGATGCGTGTGTGCAGTTATG---------------------------------------------
--------------------------------------------------------------------------------
-----TGTGATCGCAGCCTCAAAATCGAGCCAAGCTAGTGATCATGTAGTGCGTGCA--------------GTGCAGCTA
CATAGTTTTGGAAAGCTCATCAAACATATCAACGGTTAGGGATGAAAATGGAGTGGAAACTTTTCGCTTTTCTCGTGGAA
AAACGAAAATGGAAAGAAAAT------ATGGAAATGGAAATTTGCAAAATGGAAACGAAAAATGGATTT-TTTTTACGCG
GAAATGGAAACAAAA-CAGAACGTTGTTTTCTGGCGGAACAGGCATGGAAATGGAACTTTCCGTTTTCGTGAATATGAAA
TTTCCATCTTTACTATGAGA--CTATGGCTGCTTTACAGCACAACCACCAAACAAAACACAATGACACGGTGAGCAAAAT
GACCCATGGGAGGCCCAA-TTCCACGACCATGCACGTAGTC---TAGACCCTCCCCTATGCAATTCTCCAGTACTACTAT
AATACTATACTGAGTCGCTAACCTAATTATATTATTTGGTAGCCATGTTAATAATTGATCAAGTTTATTACT-GTGCTTG
TGTTTTTCTATGGTTA-----GGG-TTATTAAGTTCCGACCAACACCTGCTTATGTTTCCGTGTCCGCCCTGTATTCGCT
CGGTGTTCGTTTCCGGCAGTATATGCTTCCATATTCATTACCGGGGTTTCTGTATTCATTTTCACTTTAAAAAAAGGGCA
GCCCGGTGCACGTAACTCCCGCTTGAGCAGGGTCCGGGGAAAGGTCCGACCGCTTTGGGTGTATAATATGCAGCCTTTCC
TTACATTTCTGTAAGAGGTTGTTTCCAGAAACCCATGACCTCATGGTCACAAAGCAACAGCTTTACTGCTGCGCCAAGGC
TCCCCTTCATTCATTTCCACTTCCACAGTCATGATCTTTCAGTTTTGCCGCTTGTTGTCATATGACAGAAGCAATGGATG
CTTTGTGATGAGCATTGTGAGCAATATTAAAGGAGCTT
>chr3D_133
--------------------------------------------------------------------------------
----------------------------------------------------TAGATGCCATTAGATGAAGTTTTATCCC
AATGGCAGCCAGAAAAAAAAAGTGATGCT-TGGTGTCCACAAACTCCACAACAATGGTATTCCTCGT--CACGGACAAAT
GGCAAAA-CAGTAAATTAGAGTGCATCCAGTCCTAGCTTATCAGAAACCTGAGTAATAATCAACTGAAGCATTGATTTGA
TTGATACCACCATCCATTTTTCTATATATGATAGTAATAACT--------------------------------------
--------------------------AAAGTTCAGCCTATCTCGAATCCTGACTCTTCTTCATTTTTACGCATTCGAGGC
ATCATTACAAAAAAA--TATCAAAGATTAGCCACACTCCTGACTATAGCTAACTGTATCACTTTGCTCCCTCACAAAAGC
AAAGATTACACGAGGTGCTAGAATTCATTAGATGGAGTTTTATCCCAAATTCCCAATGGTGTCCAGAAAAAAGA------
-----------------------------------------------------------------------------ATC
CAAATCTAGCTTATCAGGAACTTGATGAATCATCAGCTGAAGCAGCGATTTCATTCGGTACCACCATCCT-TTTTTCCGT
AGATATGATACTAGT------------------------------AGCTAAACTTCTGCCTGTCTTTAATCTCGATTCTT
CTTAAAAAAGTACTTATTGAGCACATCATTAAAAATGTTATCAGAGATTAGCCACTCTTCTGGCCATAGCTAAC--TATG
ATTTTGGCCCCTCCCAAAAGCAAAGATACAAAAGGTGGTAGAATAGAACCTTCCAACAGAGAACATATATTCTACCCAAT
CAGACACATCT---------------------------------------------------------------------
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--ATAAATAAGCACCGTTGGGTCATCAGCATCATAAAACACCAAGAA-ACAACAGCCTACATATAGCTCAGGTGAACTGA
ACTGATCAGAT-G-ATCGACCGCAAAGCCCCAAGAAACAACATCCTACAGTTAGCCACCAATTGGCTCGATCAGCTTGGC
C-GACAGGGTGACGAAGCTGGCGTCGCAGCGCGCGGTGGTGATCTTTGGGGTGAGCAACCGCTTCATGTGCCACACGGTG
AAGACGCGCTCTTCGCGGAGCTGGGCGTGAGCTGGACAGTGCACAAGCTGACAAAGGACCCCTGGGGGAAGAACGTGGAG
AGGGCGTTTGCTGGCAT---------------------------------------------------------------
---GGTCATGACACTGCACCTTGGCGGCCAGCTCGTGCCGCTCCTCAGCCAGGCTGGCGCTCTCTGGCTCTAA--AGTCA
AGGACAGCAGTGGCTGATGCGTGTGTGCAGTTATG---------------------------------------------
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-----TGTGATCGCAGCCTCAAAATCGAGCCAAGCTAGTGATCATATAGTGTGTGCA--------------GTGCAGCTA
CATAGTTTTGGAAAGCTCATCAAACATATTAACGGTTAGGGACGAAAATGGAGTGAAAACTTTCCGCTTTTCCGGAGGAA
AAACGAAAATGGAGAGAAAAT------ATGGAAATGGAAATTTGCAAAATGAAAACAAAAATGGAA--T-TTTTTACGCG
GAAATGGAAACAAAA-CGGAACGTTGTTTTCCGGCGGAACAGACATGGAAACGGAACTTTCCGTTTTCGCGAATATGAAA
TTTCCATCTTTACTATGGAC--T---------------------------------------------------------
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>chr3B_133
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----------------------------------------------------TAGATGCCATTAGCTGAAGTTTTATCCC
AATCGCTGCCAGAAAAAAA-AGTGATGCTTTGGTGTCCACAAACTCCACAACAATGGTATTCCTCGT--CACGGACAAAT
GGCAAAAACAGTAAATTAGAGTGCATCCAGTCCTAGCTTATCAGAAACCTGATTAATCATCAACTGAAGCATTGATTTGA
TTGATACCACCATCCATTTTTTTTTTTTACTTTCTGGTTACCCATTTGTAACCTTTTACTCCTTCTAATCGCAATGAAAG
CAGCCAAGCTGCATTTCGTCAAAAAAAAAGTTCAGCCTATCTCGAATCCTGACTCTTCTTCATTTTTACGCATTCAAGGC
ATCATTACAAA-AAA--TATCAAAGATTAGCCACACTCCTGACCATAGCTAACTCTATCACTTTGCTCCCTCACAAAAGC
AAAGATTACACGAGCTGCTAGAATTCATTAGATGGAGTTTTATCCCAAATTCCCAATGGTGTCCAGAAAATAGA------
-----------------------------------------------------------------------------ATC
CAAACCAAGCTTATCAGGAATTTGATGAATCATCAGCTGAAGCAGCGAATTTGTTTGGTACCACCATCCTCTTTTTCCAT
AGATATGATACTA-T------------------------------AACTAAACTTCTGCCTGTCTTGAATCTCGATTCTT
CTTTAAAAAATACTTATTGAGCACATCATTAAAAATATTATCAGAGATTAGCCACTCTCCTGGCCATAGCTAAC--TATG
ATTTTGGCCCCTCCCAAAAGCAAAGATACAAAAGGTGGTACAATAGAACCTTCCAACAGAGAACATATATTCTACCCAAT
CAGACACATCT---------------------------------------------------------------------
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--ATAAATGAGCATCGTTGGGTCATCAGCATCATAAAACACCAAGAA-ACAACAGCCCACATCTAGCTCAAGTGAACTGA
ACTGATCAGAT-G-ATCAACCACAAAGCCCCAAGAAACAACATCCTACAGCTAGCCACCAATTTGCTCGATCAGCAATGG
CGGACAGGGTGAAGAAGCTGGCGTCGCAGCGTGCGGTGGTGATCTTCGGGGTGAGCAACCGCTTCATGTGCCACACGGTG
AAGA--CGCTCTTCACGGAGCTGGGCGTGAGCTGGGCGGTGCACAAGCTGGCAAAGGACCCCTGGGGGAAGGACGTGGAG
AGGGCGCTTGCTGGCAT---------------------------------------------------------------
---GGTCATGACACTGCACCTTGGCGGCCAACTCGTGCCGCTCCTCAGCCAGGCTGGTGCCCTCTTGCTCTGAAGAGTCA
AGGACAGCAGTGGCTGATGCGTGTATGCAGTTATGTGTGATTGCAGCCTCGAAATCGAGCTAAGCTAGTGATCATATAGT
GCATGTAGTGCAACTACTTAATTTTGGAACCCTCTGGCTCTGAAGAGTCAAGGATAACAGTGGCTGATGCATGTGTGCAG
TTATGTGTGATCACAGCCTCAAAATCGAGCCAAGCTAATGATCATATAGCTGGACAGTGGCTGATGCGTGTGTGCAGCTA
CATAGTTTTGGAAAGCTCATCAAACATATTAACGGTTAGGGATGAAAATGGAGTGAAAACATTCCGCTTTTACGGAGGAA
AAACGAAAATGGAGAGAAAAT------ATGGAAATGGAAATTTGCAAAATGGAAACGAAAAATGGATTT-TTTTTACGCG
GAAATGGAAACAAAA-CGGAACGTTGTTTTCCCACGGAACAGGCATGGAAACGGAACTTTCCGGTTTCGTGAATATGAAA
TTTCCATCTTTACTATGAGA--CTATGGCTGTTTTGCAGCACAACCACCAAACAAA-CACAATGAGACGGTGAGTAGAAT
GACCCACGTGAGGCCCAACTTCCATGACCATGCACGTAGTCAACTAGACCCTCCCCTACGCAATTCTCCAGTACTACTAT
AATACTATAC-------------------TATTATTTGGTAGCCATGTTAATAATTGATCAAGTTTGTTAGT-GTGCTTG
TGTTTTTCTATGGTTA-----GGG-TTATTAAGTTCCGACCAACACCTGCTTATGTTTCCGTGTCCGCCCTGTATTCGCT
CGGTGTTCGTTTCCGGTAGTGTATGCTTCCATATTCATTACCGGGGTTTATGTATTCATTCCCACTTTAC-AAAAGGGCA
GCCCGGTGCACGTAACTCCCGTTTGCGCAGGGTCCGGGGGAAGGTCCGGCCGCTTTGGGTGTATAGTACGCAGCCTTTTC
CTATATTTCTGTAAGAGGCTGTTTCCAGGAATCCATGACCTCATGGTCACAAGGCAACGGCTTTGCTGCTGCGCCAAGGC
TCCCCTTCATTCATTTCCACTTCCACGGTCATGATCTTTCAGTTTTGCCGCTTGTCGTCATATGACAGAAGCAATGGATG
CTTTGTGATGAGCATTGTGAGCAATATTAAAGGAGCTT
>chr3B_133
--------------------------------------------------------------------------------
----------------------------------------------------TAGATGCCATA----GAAGTTTTATCCC
AATGTCATGCAGAAAAAAA-TGTGACGTG-TGATGTCCACGAACTCCATGACAATGGTATTCCTCGTTACACGCACAAAT
GGCAGAAATAGTAAATTAGAGTGCATCCAATCCTAGCTTGTCAGGAACCTGATGAATCATCAACTGAAGCATTGATTTGA
TTCATACCACCACCCATTTTTCTATGTATGGTACTAATAACT--------------------------------------
--------------------------AAAGTTCAGCCTATCTCGAATCCTGATTCTTCTTCATTTTTACTCATTCGAGAC
ATCATTACAAG--AA--TATCAAAGATTAGCCAGGTTCCTGACCGTAGCTAACTGTATGGTTTTGCCCCCTCCCAAAAGC
AAAGATTACAGGAGGTGCTAGAATTCATTAGATGGAGTTTTATCCCAAATTCGCAATGGCATCCAGAAAAGGAAAATGTG
CTGCATGATGTCCACAACTCCACACAATTGGTATTCCTTCTCACGCACAAATGGCAAAAGACAAGGAATTATAGTGTATC
TAAACCTACCTTATCTGGAATCTGATGAAACA---GCTGAAGCATTGATTCAG-TTGATACCACCAAAATTCAGCCTATC
TCGAATCTTGATTCTTCACACCATTTTTCTATATACCATACTAACAACAAAAGTTCAGCCTGTCTCGGATCTTGATTCTT
CTTCATCT-TTACTTATTCGAGACGCTATTAAAGA-ATTATTGAAGATCAGCCACTCCCCTGGCCATAGCTAACTGTATG
ATTTTGGCCCCTCCCAAAAGGTGGTAGCTAGAACTAAGTTTTCTTGCCATGTCTCCTTTGATACAATGACAAAATCACCA
TAGGAACAGTGCCATTTTTATACCTTTGAATGTAATTTCTATGAAAGGAAAGGTAAATGGTGAACTTGTGGCTTTATCTA
TAAAGTCGGGCTAACGCCTTTTCTCTAAAAAAAAATGGT-----------------------------------------
--------------------GAACTCAAGATTTTCTCGTTTGGTCTGTATAATCTTCAGTGGTTGGCTGGTTGCTTAACT
AAAATCTGGTCTAGAAAGGATAAAAGTACAGTCAAGTCAAGGAATTCGAAACAGTCAAACCGATATCTCTCCCTTTATGA
TGATCTGGCTGCCTGTTTTCCCGGCACGGAATGTAGGGCATGATCAGG-------------------------TGGAAAG
TTCCCCCCTGCGTTTGATCTTTGTAATATCTTCACTGGGTATGACTTCTGT---------AATAGGAAGGTATGTTGCTG
ATGAGGTAATGGAA------------------------------------------------------------------
-------------------------------------------------------------ATTGATGAGGGAAAAATTA
TCCA--GATTGGTTTGATTGCATCTCCTTTGACTAATGTATGTTG-----------------------------------
----------------------------------------------TTTCACTATGTTTAATTCCACTCCTTAGTTTGAA
ACGTGTTTTTGCATGCATTGATTTTTTCATGACTGTCTAAC-AATGTGTGCAACTCTATCTGCAGTCGTGC---------
--------------------------------------------------------------------------------
--------------------------------------------------------AAGATTCATCTTAATAACATCTGT
CATTTCATTAAATGAACTTGAAGTTTCACAGAAGCGTATTGTGAGATATCAACCAGAACTGCACTGAATCTTCTAA-GCT
TGACTGCAGTGTTTATAAGATATTTTCCAATATGAAGACTTGTTGATAATGAAGATTTT---ATCATGGCGATCA-----
-----------------------------------GTAGTGTAAAAATTCCTTG--GGAAGACAGGTAAGTAAAAATGAG
GAGCAGCAATTGGAACAGAATGACT-GAAAGTACAACTTGTGGTAGGGAAGCTTCATTTGTGTTCTGGACAGGTATGGCT
CAAATGATACAAC----AAGGTGAGCATGTTGAAAGTTAGTTGTGATATCCATCTTCCACATTAGAAGTTATTTATTTTT
TCCAAAATATTTTTGTCCAGTCCGTCCATCATCACTAGTTCACTACTTGTAGTTG-TAGGGGAGATTTTTAGGTGTGTTT
TCTA---------CTTAATTTTGTGGTATCCATTAGATAAAGGGGTTTTAGATGTGATGCATCATGTCCAC---------
-----TGGTATTCCTTCTCACGCACAAATGGCAAAAGAGGC--AATTAGAGTGTATCTAAACCTAGCTTAATCAGGAACC
TGTTAAATCATCAGCTGAAGAATTGATTCAGTTGGTACCACAAAATTTAAGCCTATCTCGAATCTTGATTCTTCACGCCA
-TTTTTCTATGTATGATACTAACAACAAAAGTTCAGCCTGTCCCGAATCTTGATTCTTCTTCATCTTTACTTATTCGAGA
CACTATTTAAAAATAAATATCAAGGATCAGCCACCCTCGTGGTCATAGCTAACTGTATGATTTTGGCCTCTCCGAATTCT
CAAAAGCAAAGATTAGAAAAGGTGGTT----GAATAGAACCTTTAGACAGAGAACATATATTCTTCCCGATTAGCCACAT
CTCATAGAGATTCCCTTGCACCTCAATCAAGCCTGCAACACTGCGCCGACCACTCC---CTCTTCACCCGCCGCAGTCAT
CTATAAATAAGCACCGTTGGATCATCACCATCATCCAACTCCAAGAA-ACCACAGCCTACATCAAGCTCAAGTTAAGTGA
GCTGACCAGAATATATCGATCACAAAACCCGAAGAACAGCAGCATACAGGCTAGCCACCAATTCGCTTGATCTGCAATGG
CAGAAACTGTGACGAAGCTGGTGTCACAGCGGGCGGTGGTGATCTTCGGGGCGAGCAACTGCTGCATGTGCCACGCAGTG
AAGA--CGCTCTTCACGGAGCTGGGCGTGAGCTGGGTGGTGCACGAGCTGGACAAGGACCCCCGCGGGAAGGACGTCGAG
AGGGCGCTCGCCAGCAT---------------------------------------------------------------
---GGTCAGAC---------------------------------------------------------------------
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>chr3A_845
GGTCATGACGCTGCACGTCGGCGGCCAGCTCGTGCCGCTGCTCCGCCAGGCTGGCGCCCTCTGGCTCTGAAGATCTATGA
CAGCAGTGGCTGATGCGTGTGTGCAGTTATGTGTGATCGCAGCCTCGAAGTTGAGCTAAGCTAGTGATCATGTAGCGCAT
CTAGTGCATCTACATAATTTTGGAAAGGTCATTATCAAACATATTAACAGTCATGATTTTTCAGTTTGACCTCTTGTTGT
CATATGACAGATGCAATGGATGCTTTGTGATGAGCATCCTGAGCAATACTAAAGGAGCTTATGCTTATCTTATCTTGTCG
-----------------TTGCTTAATTTAGCCTACTGTTGTGCTAAGACCTTGAGAGAATCCACGGTATATATAATGCTC
CTCAGTAAATGGAGAATATAGTGTCATATCGTACATGTTCTTCTTGGAGCTATATAATGGTAGTAGATAATAGGAGGTAG
ATGCACTAATTCAGGGAGGTTAGTATGTTGAGGTAGATGCACTGGTCCAGTGAGCTCGGTATGGTACGAGCCAAAAAGAA
GGATCTACCTAGGCTGCATTTGGCTTATGGAATTGCAGCTTGTTTGGCCAAAAAATGTTTTTCTACTCTTAGCCTTAGGT
GAATGCTGTCGATGGCGGGAGGTAGGGCACTCCATGGGCCAGGGTGTCCTCCATTTCGCTTTTCAAACCCCATGGAAACT
CCGAATACATGCGTCATCCTAAGTACAGGCACATCGATTTACTATTATTTGTGTAACCCCTTAT----------------
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--------------TTTGTATACTTTTGTTGCTAATTTCCGTCGCAGATTAACAAATTAGTACTGTAGATTGCAATGCCA
TTCAGTAACCTTAAACTGAGTGGGTTTAGATAGTAG------------------------------TTGGTATAAAGGTC
TAAAAGATATGGTAGGTCAAGATTAA---------CCTTCTAATTCTATACGTTCTTTTCGGCAATCTCATA--------
---------TCTATCACGGAGAAATTAAGAGATATGTCAAGG---CTTCTGTAACAAAGTGAAAAGGCGTTTTTCACTAT
CAAGTTTGCGCACTAGCTAGTTTGACTGTGTAATGTAATCCTGGTATCCATGCATAAGATTGGCGGTCTTTTTTGGGAAG
TTTTTACCCGTATTTGTTGAAAGCA-TATCCCTCATGACATAGCTTATCATCACATCCTGAATAGGAAGGTATGTTGCTG
ATGAGGTAATGAAA------------------------------------------------------------------
-------------------------------------------------------------ATTGATGAGAAATCAAAAT
TAACTGGGTGGGTTTGATTGGACCTCCTCTGATTAATGTATGTTGCTGACGAGGTAATGGAAATTGATGAGAAATCAAAA
TTATCTGTATGGGTTTGATTGGATCTCCTCTGATTGATGTATGTTATTTCACTGTGTTTAATTCCTCTCCTTGGTTTGAA
ACATGTTT--GCATGCATAGAATTTGTAATGCCTGTCAAAATAATGTGTGCAACTGTATCTGCTATTTGCCTTGCCCAAT
ATTCAAAATATAGTAGACTCTTGCATGTACTGGCTACCAACTTGATTAGCAGATACTGAGCTCAGCAATGCAAATGTGTA
GAGTTCATGTCACAGACTCACATCCGTAGAACACTAGGTGTTGTAGTCATTTATTTAAGATTGATCTTAATAACCTTTGT
CATTTCATTAAAAGAATGTTAAGTTTG-CAGAAGTGTATTTGGAGATATCCATCAGAACTATACTGAATCTTCTAA-GCT
TGACTGCAGTGTGTATA-------------------GACTTGGCAGTAATGAAGAATTT---TTTTTTAGCCAAAACAGG
AGCTCTGCTTTTGCGTTGAAGATAAGGGATTTATCGTAGTGTAA--------------------------TAGAAATGAG
GAGCAGCAACTGGAACAGAAATGACCGAAAGTACAACTTGTGGCAACGGAGCTTCATTTGTGTTCTGGA-AGGGATGGCT
CAGACGAT---ACAACAAAGGTGAGCATGTTGAATGTTAGTTGTGATATCCATCTTCCACATTAAAACTTATTTATTTTT
TCCAAGAAAC-TTTGCCCAATCCGTCCACCATCACTATTTCACAAGTAGTTCTAGCTAGGAGAGATCGTTACGTGTGATC
TGGAACTAGTTCTCTACTTAATTTT---------------------------------------------C---------
-----TGGTATTCCTTCTCACGCACAAATGGCAAAAAACAAGGAATTAGAGTGTATCTATCCTAGCTT--ATCAGGAACC
TGTTGAATCATCAGCTGAAGCATTGATTCAATTGATATCACCAAAGTTTAGCCTCTCTTGAATCTTGATTCTCCACACAT
TTTTTTCTATATATGATACTAACAACAAAAGTTCAGTCTGTCTTGAATCTTGATTCTTCTTTAA----------------
--------------AAATATCAAAGATCAGCCACTCTCCTGGACATAGCTAACTGTATGATTTTGGCCCCTCCCAATTCC
CAAAAGCAAAGATTAGAAAAGGTGGTGGCTAGAATAGAACCTTTAGACAGAGAACATATATTCTACCCGATTAGCCACAT
CTCATAGCGATTCCCTTGCACCTCAGTTAAGCGTGCAATCCTGCGCCGACCACTCCATGCTCTTTACCCGCCGCGGTCAT
CTATAAATAAGCACCGTTGGGTCATCTCCATCATCCAACTCCAAGAACACAACAGCCTAGAGCAAGCTCAAGTGAAGTGA
GCTGATCAGATCG-ACCAATCACAAATCCCCAAGAA---CAGCCTACTAGCTACCCACCAATTCGCTCGATCAGCAATGG
CAGACAGAGTGACGAAGCTGGCGTCGCAGCGGGCGGTGGTGATCTTTGGGGCGAGCAACTGCTTCATGTGCCACACGGTG
AAGA--CGCTCTTCACAGAGCTGGGCGTGAGCTGGACGGTGCACGAGCTGGACAAGGACCCCCGCGGGAAGGACGTCGAG
AGGGCGCTCGTCGGCATGGTC-----------------------------------------------------------
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>chr3B_845
TCATG---------------------------------------------------------------------------
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-------------------------------------------------------ATTTTTCAGTTTGACCTCTTGTTGT
CATATGACAGAAGCAATGGATGCTTTGTGATGAGCATCCTGAGCAATATTAAAGGAGCTTATGCTTATCTTATCTTGTCG
CTGCTTAATTTGATGTTTTGCTTAATTTAGCCTACTGTTGTGCTAAGACCTTGAGAGAATCCACGGTATATATAATGCTC
CTCAGTAAATGGAGAATATAATGTCATATCGTACATGTTTTTCTTGGAGCTATATAATGGTAGTAGATAATAGGAGGTAG
ATGCACTAATTCAGGGAGGTTAGTATGTTGAGGTAGATGCACTGGTCCAGT-AGCTCGGTATGGTACGAGCTAAAAAGAA
GGATCTACCTAGGCTGCATTTGGCTTATGGCATCGCAGCTTGTTAGGCCAAAAAATGTTTTTCTACTCTA------AGGT
GAATGCTGTCGATGGCGGGAGGTAGGGCAGTCCCTGGGCCAGGGTGTCCTTTATTTCCCTTTTCAAACCCCATGGAAACT
CCGAATACATGCGTCATCCTAAGTACAGACACACCGATTCGGTGTTATTTGTGTAACCCTTTAT----------------
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--------------TTTGTATACGTTTGTTGCTAATTTCCGTTGCATATTAACAAATAAGTACTGTATATTGCAACGCCA
TTCAGTAACCACAAACTGAGTGGGTTTAGATAGTAGTTGATATAAAGGTCTAAAAGATTCTTTTTTTTGATAAAAAGGTC
TAAAAGATATGGTAGGTCAAGAACTCAAGATTAACCCTTCTTATTCTATACGGTCTTTTCGGTAATCTCATAC-------
----------CTATCACGGAGAAATTAACAGATATGTCAAGGCTTCTTCTGTAACAAAGTGAAAAGGTGTTTTTCACTAT
CAAGTTTGCACACTAGCTAGTTTGACAGTGTAATGTAATCCTGGTATCCATGCATAAGATTGGTGGTCATTTTTGGGAAG
TTTTTACCCGTATTTGTTGAAAGTGCTATCCCACATGACATAGCTTATCATCACATCCTGAATAGGAAGGTATGTTGCTG
ATGAGATAATGGAAGGGGCAGCCCCAGTGCATGTAGCTCCCGCTTGCGCAGGGTCTGGGGAAGGGTCCGACCACTTTGGG
TCTATTGTACGCAGCCTTTCCCTACATTTCTGTAAGAGGCTGTTTCCAGGACTTAATGGAAATTGATGAGAAATCAAATT
TAGCTGGATGGGTTTGATTGGATCTCCTCTGATTAATGTATGTTGCTGACGAGGTAATGGAAATTGATGAGAAATCAAAA
TTATCTGTATGGGTTTGATTGGATCTCCTCTGATTAATGTATGTTA--TCACTGTGTTTAATTCCTCTCCCTGGTTTGAA
ACATGTTT--GCATGCATAGAATTTGTAATGCCTGTCAAAATTATGTGTGCAACTGTATCTGGTATTTGCCCG-----AT
ATTCAAAATATAGTAGATTCTTGCATGTACTGGTCACCAACTTGATTAGCAGATACTGAGCTCAGCAATGCAAATGTGTA
GAGTTCATGTCACAGACTCACATCCGTAGAACACTAGGTGTTGTAGTCATTTATTTAAGATTGATCTTTATAACATTTGT
CATTTCAGTAAAAGAACGTTAAGTTTA-CAGAAGTGTATTTGGAGATATCCACCAGAACTATACTGAATCTTCTAAAGCT
TGACTGCAGTGTGTATA-------------------GACTTGTCAGTAATGAAGAATTTGTGTTTTTCAGCCAAAACAGG
AGCTCTGCCTTTGCATTGAAGATAAGGAATTTATCGTAGCGTAAAAAAAAATCTTTGGAGGACAGGTAAGTAGAAATGAG
GAGCAGCAACTGGAACATGAATGACTAATAGTACAACTTGTGGCGAGGAAGCTTCATTTGTGTTCTGGA-AGGGATGGCT
CAGACGAT---AC----AAGGTGAGCATGTTGAATGCTAGTTGTGATATCCATCTTCCACATTAAAACTTATTTATTTTT
TCCAAGAAAC-TTTGTCCAATCCATCCACCATCACTATTTCACAAGTAGTTCTAGCTAGGGGAGATCGTTACGCGTGATC
TGGAGCTGGTTCTCTAAATTTTGTGGTTTCCATTAGATAAAGGGGTTTTATATGTGATGCATCATGTCCACAAACTCCAC
ACCAATGGTATTCCTTGTCACGCACAAATAGCAAAAAACAAGGAATTCGAGTGTATCTAACTTAGCTT--ATCAGGAAAC
TGTTGAATCATCAGCTGAATTATTGATTCAATTGATATCACCAAAGTTTAGCCTCTCTCGAATCTTGATTCTTCACACAA
-TTTTTCTATATATGATGCTAACAACAAAAGTTCAGTCTGTTTCGAATCTTGATTCTTCTTTAA----------------
--------------AAGTATCAAAGGTCAGCCACTCTCCTGGACATAGCTAACTGTATGATTTTGGCCCCTCCCAATTCC
CAAAAGCAAAGATTACAAAAGGTGGT----AGAATAGAACCTTTAGACAGAGAACATATATTCTACCCGATTAGCCACAT
CTCATAGCGATTCCCTTGCACCTCAGTTAAGCGTGCAATCCTGCGCCGACCACTCCCTCCTCTTTACCCGCCGCAGTCAT
CTATAAATAAGCACCGTTGGGTCATCACCATCATCCAACTCCAAGAACACAACAGCCTAGAGCAAGCTCAAGTGAAGTGA
GCTGATCAGATCG-ATCAATCACAAATCCCCAAGAACAACAGCCTACTTGCTACCCACCAATTCGCTCGATCAGCAATGG
CGGACAGAGTGATGAAGCTGGCGTCGCAGCGGGCGGTGGTGATCTTTGGGGCGAGCAACTGCTTCATGTGCCATGCAGTG
AAGA--CGCTGTTCACAGAGCTGGGCGTGAGCTGGACGGTGCACGAGCTGGACAAGGACCCCCGCGGGAAGGACGTCGAG
AGGGCGCTCGTTGGCATGGTCGGACGGAGCCCGCCCATCCCAGCCGTCTTCATCGGCGGCAGGCTTGTCGGCACCACCGA
CCAGGTCATGACACTGCACGTCGGTGGCCAGCTCGTGCCGCTCCTCCGCCAGGCCGGCGCCCTCTGGCTCTGAAGAGTCA
AGGACAACAGTGGCTGATGCGTGCGTGCAGCTATGTGTGATCGCAGCCTCGAAATCGAGCTAAGCTAGTGATCATATAGT
GCGTGCAC------------------------------------------------------------------------
-----------------------------------------------------TGCA--------------GTGCAGCTA
CATAATTTTGGAAAGGTCATCAAACATATTAACGGT--------------------------------------------
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>chr4A_1376
ACATATACAC----------------------------------------------------------------------
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-------------------------------ACGTATAGGGATGAAAATGGAGTGGAAACTTTTCGTTTTTGCGGAGGAA
AAATGGAAACGGAGAGGAAATATCAAAATGGAAACGGAAATTTACAAAACGGAAGTGGAAATGGAA--T-TTTTTATGCG
GAAGCGGAAACAAAAACGGAATGGTGTTTTCCGGTGGAACATGCATGGAAATGGAACTTTCCGTTCTCGTGAATATGGAA
TTTTTGTTTTTACTAT--AGACCTATAGCTACTTTGTAGCCCAACCACCAAAGAGAACACAATGACACAATTAGTAGAAT
GGATC---TAAGGCCGAACTTCTACTACCACACATGTACTCAGCTTGACCATA---TACGCAATTGTCCGGTACAACTAC
AATACTACGGTAAGTTGCTAACATAATGATATTATTTTGTAGCCATGTTAACAACTCATTAAATTTGTTTGT-TTTTGTG
TGTATTTCTGTATGATTCAAGGGG-TTTTTAAATTCCGATCAATGCCTATTTCTG-TTTCGTATCCACTTTGTATTTGCT
CCGTGTCCGTTTCCGGTAGTATTTATTTCCGTATTCATTTCCGGGGTTTCTGTATTCGTTT-------------------
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>chr2B_1386
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---------------------------------GGCTAGGGATGAAAATGGAGTGGAAACTTTTCATTTTTCTGGAGGAA
AAATGGAAACAGAGAGGAAATATGAAAATGGAAATGGAAATATGCAAAACGGAAGTGGAAATGGAA--T-TTTGTATGCG
GAAACAGAAACAAAAACGGAACGGTGTTTTCCGGTGGAACATGCATGGAAGTGGAACTTTCCGTTTCTGTGAGTATGGAA
TTTCTGTTTTTACTAT--AGACCTATAGCTGCTTTGTAACCCAACCATCAAAGAGAACACAATGACACAATTAGTAGAAT
GGATC---TGAGGCCCAATTTCTACTACCACACATGTACTCAGCTTGACCCTA---TACGTAATTGTCCGGCACTACTAC
AATAGTACGCTAAGTTGCTAACATAATGATATTATTTTGTAGCTATGTTAACAAATCATTAAATTTGTTTGT-TTTTGTG
TGTATTTATCTATGATTCAAGGGG-TTTTTAAGTTCCGATCAATGCCTATTTATGTTTTTGTATCCGCTTTGTATTTGCT
CCGTGTTTGTTTCCGGTAGTATCTGTTTCCGTATTCATTTCTAGTGTTTCTGTATTCGTTTCCGCTTT------------
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>chr3D_1388
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-----------------------------------TTAGGGATGAAAATGGAGTGGAAACTTTCC-TTTTTCCGGAGGAA
GAATGGAAACGGAGAGGAAATATGAAAATGGAAACGGAAATTTGCAAAACGAAAGTGGAAATGGAA--T-GTTTTATGCG
GAAACGGAAACAAAAACGGAACGGTGTTTTCCGGTGGAACAGGCATGGAAATGGAACTTTCCGTTTCCGTGAATATGGAA
TTTCTGTTTTTACTAT--AGACCTATAGCTGCTTTGTAGCCCAACCACCAAAGAGAACACAATGCCACAATTAGTAGAAT
GGATC---TAAGGCCCAACTTCTACTACCACACATGTATTCTGCTTGACCCTA---TACGCAATTGTTCGGTACTAGTAC
AATACTACGCTAAGTTGCTAACATAATGATATTATTTTGTAGCCATGTTAACAACTCGTTAAATTTGTTTGT-TTTTGTG
TGTATTTCTCTATGATTCAAGGGG-TTTT-AAGTTCCGATCAATGCCTATTTCTGTTTCCGTATCTGCTTTGTATTCGCT
CCGTGTC-GTTTTCGATAATATCTGTTTCCGTATTCATTTCCGGGATTTCTGTATTCGTTTCCACTTCTGCAAAAAAA--
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>chr6A_1388
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-----------------------------------TTAGGGATGAAAATGGAGTGGAAACTTTCCGCTTTTCCGAAGAAA
AAATGGAAACGGATAGGAAATATGAGAACAAAAATTGAAATTTGCAAAAGA-AAGTGGAAATGGAA--TTTTTTTATGCG
GAAACGGAAACAAAACCGGAACGGTGTTTTCTGGTGGAACAGGCGTGGAAATGGAACTTTCCGTTTCCGTGAATAAGGAA
TTTCCGTTTTT--TAT--AGACCTATGCCTGCTTTGTAGCCCAACCACCAAACAACACACAATGACACAATGAGTAGAAT
GGATCATTTGAGGCCTAACTTCTGCCACCACACATGTACTCAGCTTGACCTTA---TACACAATTATCCAGTACTAATAC
AATACTACGCTAAGTTCCTAACATAATAATATTATTTTTTAGCCATGTTAACAATTCATCAAATTTGTTTGT-TTTTGTG
TGTATTTCTCTAGGATTCAAGGGTTTTTT-ATGTTCTGGTCAACGTCCACTTCTGTTTTCGTGTCCGCTTTGTATTCGCT
CCGTGTCCGTTTTCGGTATTATCTGTTTCCGTATTCATTTCCGGGGTTTCTGTTTT------------------------
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>chr1A_1388
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-----------------------------------TTAGGGATGAAAATGGAGTGGAAACTTTCCGCTTT-CCGGAAGAA
AAATGAAAACGAAGAGGAAATATG-AAACGGAAACGGAAATTTGCGAAACAGAAGTGGAAATGAAA--T-TTTTTATACG
AGAACGGAAACAAGAACGAAACGGTGTTTTTCGGTGGAACATACGTGGAAATTGAACTTTTCGTTTCCTTGAATATGAAA
TTTCTGTTTTTACTATGGGC--TTGTGGCTGCTTTGTAGTCCAACCACTAAACAACACACAATGACACAATGAGCAGAAT
GAATCATCAGAATCCCAACTTCTACTACCACACCCGTACTCAACTAGACCCTA---TACACCATTGTCCGATACTACTGC
AATATTATGCTAAGTTGCTAATATAATCATATTATTTTCTAGCCATGTTACCAATTCATTAAATTTGTTTGT-TTTTCTG
TGCATTTCTCTAGGATTCAACGGGTTTTT-AAGTTCCGGCCAACGTCCACTTCTGTTCCCGTGTGCGCTCTGTATTCGCT
CTGTGTCTGTTTTCGGTAGTATCTGTTTCCGTTTTCATTTCCAGTATTTCAGTATT------------------------
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>chr7A_1389
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------------------------------------TAGGGATGAAAATGGAGTGGAAACTTTTCGTTTTTCCGGAGGAA
AAATGGAAACAGAGAGGAAATATGAAAACGGAAATGGAAATTTGCAAAACGGAAGTGGAAATGGAA--T-TTTTTATGCG
GAAACGGAAACAAAAATGGAACGGTGTTTTCCGGTGGAATATGCATGGAAATGGAACTTTCCGTTTCCGTGAATATGGAA
TTTCTGTTTTTACTAT--AGACCTATAGCTGCTTTGTAGCCCAACCACTAAAGAGAACACAATTACACAATTAGTAGAAT
GCATG---TAAGGCCCAACTTCTACTACCACACATGTACTCAACTTGACCCTA---TACGCAATTGTCCGGTACTACTAC
AATACTACGCTAAGTTGCTAACATAATGATATTATTTTGTAGCCATGTTAACAACTCATTAAATTTGTTTGT-TTTTGTG
TGCATTTCTCAATGATTCAAGGGGTTTTT-AAGTTCCGATCAATGCCTATTTCTGTTTCCGTATCCGCATTGTATTCGCT
CCGTGTCCGTTTCCGGTAGTATCTGTTTCCATATTCATTTCCGGGGATTCTGTATTCGTTTCCGCTTCTGCAAAAAAA--
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>chr3D_1391
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--------------------------------------GGGATGAAAATGGAGTGGAAACTTTCCGTTTTTTCAAAGGAA
AAATGGAAACGGGGAGAAAATATGAAAATGGAAACGGAAATTTGCAAAACGGAAGTGGAAGTGGAA--T-TTTTTATGCG
GAAATGGAAACAAAAACAGAATGGTGTTTTCCGGTGGAACAGGCATGGAAATGGAACTTTCCGTTTCCGTGAATATGGAA
TTTCTGTTTTCACTATGTAGACCTATGGTTGCTTTGTAGTCCAACCACCAAACAACACACAATTATACAATGAGTAGAAT
GCATCATTTGA-GCCCAACTTCTACTACCACACATGTACTCACCTTAATCCTA---TACGCAATTGTCCAGTACTACTAC
AAT-CTATGCTAAGGTCTTGACATAATGATATTATTTTGTAGACGTGTTATCAATTCATTAAATTTGTTTGTGTTTTGTG
TGTATTTCTTTAAGATTCAAGGGTTTTT--ATGTTCCGGTCAACTCCCACCCGTGTTTTCGTGTCTGCTTTGTATTTGCT
CCGTGTCCGTTTCCGGTAGTATCTGTTTCCGTATTCATTTCCGGGGTTTCTGTATCCGTTTCCGCTT-------------
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--------------------------------------
>SNPs
--SSSSS-S-S-SSSSSSSSSSSSS-SS-SSS-SSSSSS-SSSSSSSSSSSSSS-SS-SSSSSSS-SSS-SS-SSSSSSS
S--SSSSSSSSS--SSSSS-S-SS-SSSSSS-S-SS-S-SSSS-SSSSS-SS----------------------------
---------------S--S----------------------------------------------S--------------
S----------------------------------------------S--------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S---------------S----------------------S-------------------------
-----S--------------------------------------------------------------------------
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-------------S------------------------------------------------------------------
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S-------------------------------------------------------------------------------
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---------------------------------S-----------------S----------------------------
S---------------------S----------S---------------S-------------------------S----
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
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---------------------------------------------S-----S----------------------------
-----------------------------S-------------------------------------------S-S----
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S----------------------------------------S---
--------S-------------------------------------------------S---------------------
-----------S---S------S----S--------------------------------------S---S---------
--------------------------------------------------------------------------------
----------------S--------------------------------------------S-------SS---------
---------------------S---S-------------S--------S----------------S--S---------S-
S--S--------------S---------S--S--------------------S-----S-----S---------------
--------------------------S----------------------------S------------------------
--------------------------------------
>forward_3234
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--------------ATCGACCACAAAGCCCCAAA----------------------------------------------
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>reverse_4520
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---------------------------------------AAAGGTCCGACCGCTTTGG----------------------
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--------------------------------------
