>input_sequence_85970
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---------------------ATGGCCACCAAGGGCTACCAGGCTCAAGCACCGGCGATGCCCGCGGCGGGAGGGCCCGC
CGGCTCCGGC------GGCGGC------------AACAAGGCGCCGACGGGGAGCACGTCCCTGCCGAGGCGCGGCCAGA
TCAAGGAGCGGATCATCAAGGACGTGATCACCGCGGTCACCAACCTGGCCGCCGGGCTCGTCCGCGCCGACAAGAACGGC
GCCGGCACCGGCGGTCTCCCGGCCGCCGGCGACGCCGACGCCAAGTGA--------------------------------
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>chr1B_1_TraesCS1B01G298600
AGGGCGACGTTCCAGGGTGTGAGCTCGACGCGGACGCCGTAGCAGAACTTGGC-GCCGCCTCGAAGGTGCCTGGCCCGCC
GGGAAAGTCCGGGAAGGTGATGCGGTACGACTTGCCGTCATGCATCCTAACATGCTGCTGCTCCTCGTCCCCGTCCTCCT
CCTCTGCTTCCTCAATCTCTGTTTCTGCCGCAGCATGCTCTTCGACATTGCCTTCAGAACTCCCATGCCGACGCCGCCGC
TGGCCCTCTAGACGCTGCTCGTCCTGCTCGGCAAGCAGGCGGCTGATGTTGCGGCTCTTGGACATGAGCAGGAACTGCGC
GCGCAAGCACCAACTTCTCCGCGGAATTTCGTCGAGCACAGATTTAATTCAGGTGGGGGTTCATGTGGGGGGTAACTGCA
GGTTGAATCAGTGAAACGGCAGGGGGGTTTGTGCAAAACTGCAGGCGCTGACCGG-CCAGCCACTTGGCAGCCAATTGGC
GAGCTCTGATTGGTCTGGGACTAAAACATCACATTGGTTGCAAGTTGGGGTATGAGTTGATCTAGTTTTGCAACTTTGGG
ACTAGATCATCACATTGGGTGCAAGTTAGGGTACCTGGGATGCTATTACCTCTTCGAGAAACC-TTGCACTACCGACTTG
CCATCCAAGCCAGCCAAGCCGTGCAGACTTGCCACTAGCAGGCTAGCAGCAGCGCCCAGCATAGAAAGTACAAGGCGGCC
CCACAGTCGACCGTCC-AAAATTTAGATGTGGACGCTTT-----CTGCCGAGTCACTGGCCGCGTCCCCACGTGACACCT
GGTTACCCCACCTGTCACTGAGACGCGCGAGCTCCCGGCCAGTA-AGCCCGAGCCCGCCATATACGCTTTTGGGTCCCAT
GCCCGAGCGCGCTTTGGGACCCGCCATCTCTGCTCTTTTCCGGCCATCGCTCTGCTCTCTGCCCATGCACAGCCGCCTAT
TTAACCGGTCTCGGCTCGCAGCGTGGAGGAT----------------------ACCCAGCCT------------------
-----------CGACGGAAGAATGGCCACCAAGGGCTACCAGGCTCAAGCACCGGCGATGCCCGCGGCGGGAGGGCCCGC
CGGCTCCGGC------GGCGGC------------AACAAGGCGCCGACGGGGAGCACGTCCCTGCCGAGGCGCGGCCAGA
TCAAGGAGCGGATCATCAAGGACGTGATCACCGCGGTCACCAACCTGGCCGCCGGGCTCGTCCGCGCCGACAAGAACGGC
GCCGGCACCGGCGGTCTCCCGGCCGCCGGCGACGCCGACGCCAAGTGAACCACCCCCGTTCTCCTCCACCCGCT------
----------CGCTCGGTGTGCTCTCCTTGCCTCGTCGATCTCGTCCTCTGTTGCTACTCTGTGCTCATTTTA-GTGCGC
GCAGCAGAGGCCGGAGCAAAATACTACTACTACTACTCTGTGCTCATTGTAGTAGTTTGT--TAATTTTCCGTCGCGTCA
GCGTCAGTACTCAGTGGTGGATGGATTCAGTTGCCTTATTAGAGGTAGCAACTGGTCTCCCCATCCGTAGTTTCTGCGTC
TTGAGCTGGGTCCGCCTCGGCGATCTTCTTGCTGC--------TGCTGGTTGGTGGTGAAGCCTCAGCTGCTAGCATCTC
GGGGGGCTT-GCCAA-----------------------------------------------------------------
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-------------------------------------------------------------------------------G
GTTTTTTAGTG-CGACCTCCCGATATGTTT-CCGCTGCGTCTTCAT---CTCCTCGAGCTGGTCTGGTCGATCGTAGCCA
-GGTCTTCAGGTTGTGTCTTGTGTGCTGCTTGCTCGGGTTTGGTT-----GTGTGCTCGTGTATGG---TATGGTACTGT
AAAAAGGAGGGACGGATAAGCAAGTAT--TATGGTCCGATCCGTCCTTCCTTTCTTGTGTGTGTGC--TTCTAGTATTAT
GG-TCCGTTCTTATCAAATCGATACTACTGGTTAC------TCTTAAGCATTTGGGGTCGTGTTAATTTTTTCGACAAAG
GGGATCGTGTTAA-TTAGAAACCCG-----TTTGGCCACCGGAGGATTCTGCTTCAAGTTCTATCACGTTTTTGCTTGAC
CTCTGCATTTCCATTTTTAGGTTGCTTAACCTTTGCATGATGAGTGCAAAAGTTAGTCCCTTTCTATGTCCTGTCACCTG
CGTGGCGCAAGGAAAACATGGCTCAGCTTTGATTGAGGGACGACAATCGTCATAAGATTCC-AGGGAGAACAGAATAAAT
ATGAAAATGAAAAGGTGGTGATATTA--TACGAAGCACTGTTG----------------------------GCGCTCAAG
TCTTAATCCATCTCCCACAGACCTTGCTTGTCCAAGTCAAGTCTCCGCCCGCAATCAACTTGCTGCCGATGCCAAAAGCC
CA
>chr2A_1
AGGGCGACGTTCCAGGGTGTGAGCTCGACGCGGACGCCGTAGCAGAACTTGGC-GCCGCCTCGAAGGTGCCTGGCCCGCC
GGGAAAGTCCGGGAAGGTGATGCGGTACGACTTGCCGTCATGCATCCTAACATGCTGCTGCTCCTCGTCCCCGTCCTCCT
CCTCTGCTTCCTCAATCTCTGTTTCTGCCGCAGCATGCTCTTCGACATTGCCTTCAGAACTCCCATGCCGACGCCGCCGC
TGGCCCTCTAGACGCTGCTCGTCCTGCTCGGCAAGCAGGCGGCTGATGTTGCGGCTCTTGGACATGAGCAGGAACTGCGC
GCGCAAGCACCAACTTCTCCGCGGAATTTCGTCGAGCACAGATTTAATTCAGGTGGGGGTTCATGTGGGGGGTAACTGCA
GGTTGAATCAGTGAAACGGCAGGGGGGTTTGTGCAAAACTGCAGGCGCTGACCGG-CCAGCCACTTGGCAGCCAATTGGC
GAGCTCTGATTGGTCTGGGACTAAAACATCACATTGGTTGCAAGTTGGGGTATGAGTTGATCTAGTTTTGCAACTTTGGG
ACTAGATCATCACATTGGGTGCAAGTTAGGGTACCTGGGATGCTATTACCTC----------------------------
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>chr1A_1
AGGGCGACGTTCCAGGGTGTGAGCTCGACGCGGACGCCGTAGCAGAACTTGGC-GCCGCCTCGAAGGTGCCTGGCCCGCC
GGGAAAGTCCGGGAAGGTGATGCGGTACGACTTGCCGTCATGCATCCTAACATGCTGCTGCTCCTCGTCCACGTCCTCCT
CCTCTGCTTCCTCAATCTCTGTTTCTGCCGCAGCATGCTCTTCGACATTGCCTTCAGAACTCCCATGCCGACGCCGCCGC
TGGCCCTCTAGACGCTGCTCGTCCTGCTCGGCAAGCAGGCGGCTTATGTTGCGGCTCTTGGACATGAGCAGGAACTGCGC
GCGCAAGCACCAACTTCTCCGCGGAATTTCGTCGAGCACAGATTTAATTCAGGTGGGGGTTCATGTGGGGGGTAACTGCA
GGTTGAATCAGTGAAACGACAGGGGGGTTTGTGCAAAACTGCAGGCGCTGACCGG-CCAGCCACTTGGCAGCCAATTGGC
GAGCTCTGATTGGTCTGGGACTAAAACATCACATTGGTTGCAAGTTGGGGTATGAATTGATCTAGTTTTGCAACTTTGGG
ACTAGATCATCACATTCGGTGCAAGTTAGGGTACCTGGGATGCTATTACCTCT---------------------------
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---------------------ACGTGAA----------------------------------------------------
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>chr3B_1
AGGGCGACGTTCCAGGGTGTGAGCTCGACGCGGACGCCGTAGCAGAACTTGGC-GCCGCCTCGAAGGTGCCTGGCCCGCC
GGGAAAGTCCGGGAAGGTGATGCGGTACGACTTGCCGTCATGCATCCTAACATGCTGCTGCTCCTCGTCCCCGTCCTCCT
CCTCTGCTTCCTCAATCTCTGTTTCTGCCGCAGCATGCTCTTCGACATTGCCTTCAGAACTCCCATGCCGACGCCGCCGC
TGGCCCTCTAGACGCTGCTCGTCCTGCTCGGCAAGCAGGCGGCTGATGTTGCGGCTCTTGGACATGAGCAGGAACTGCGC
GCGCAAGCACCAACTTCTCCGCGGAATTTCGTCGAGCACAGATTTAATTCAGGTGGGGGTTCATGTGGGGGGTAACTGCA
GGTTGAATCAGTGAAACGGCAGGGGGGTTTGTGCAAAACTGCAGGCGCTGACCGG-CCAGCCACTTGGCAGCCAATTGGC
GAGCTCTGATTGGTCTGGGACTAAAACATCACATTGGTTGCAAGTTGGGGTATGAGTTGATCTAGTTTTGCAAGTTTGGG
ACTAGATCATCACATTGGGTGCAAGTTAGGGTACCTGG------------------------------------------
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>chr1D_2
-GGGCGACGTTCCAGGGCGTGAGCTCGACACGGACGCCGTAGCAGAACTTGGCCGCCGCCTCGAAGGTGCCCGGCCCGCC
GGGAAAGTCCGGGAAGGTGATGCGGTACGACTTGCCGTCATGCATCCTAACATGCTGCTGCTCCTCGTCCCCGTCCTCCT
CCTCTGCTTCCTCAATCTATGTTTCCGCCGCAGCATGCTCTTCGACATTGCCTTCAGAACTCCCACGCCGACGCCGCCGC
TGGCCTGCTGGACGCTGCTCGTCTTGCTCGGCAAGCATGCTGCTGATCTTGCGGCTCTTGGACATGAGTGGGAACTGCGC
GCGCAAGCACCAACTTCTCAGCGGAATTTCGTCGAGCACAGATTTAATTCAGGTGTGCTAT-------------ACCGCG
GGTTGATTCAGGGAAACAAC-GGGGGTTTTGTGAAAAACTACGTGCGCTGACCGGTCCAGCCACCTGGCAGCCAATTGGC
GAGCTGTGATTGGCCTGGGACTAAATCATCACATGAGATGCAAGTTGGGGTATGATGGAGTCAAGTTTTGCAACTTTGGG
ACTAAATCATCACATTGTGTGCAAGTTAAGGTACCTGGGGTGCTATTACCTC----------------------------
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>chr1D_2
-GGGCGACGTTCCAGGGCGTGAGCTCGACGCGGACGCCGTAGCAGAACTTGGCCGCCGCCTCGAAGGTGCCCGGCCCGCC
GGGAAAGTCCGAGAAGGTGATGCGGTACGACTTGCCGTCATGCATCCTAACATGCTGCTGCTCCTCGTCCCCGTCCTCCT
CCTCTGCTTCCTCAATCTCTGTTTCCGCCGCAGCATGCTCTTCGACATTGCCTTCAGAACTCCCACGCCGACGCCGCCGC
TGGCCCGCTGGACGCTGCTCGTCCTGCTTGGCAAGCATACGGCTGATCTTGCGGCTCTTGGACATGAGCGGGAACTGCGC
GCGCAAGCGCCAACTTCTCAGCGGAATTTCGTCGAGCACAGATTTAATTCAAGTGTGCTAT-------------ACTGCG
GGTTGATTCAGGGAAACAACAGGGGGTTTTGTGCAAAACTGCGTGCGCTGACCGGTC-----------CAGCCAATTGGC
GAGCTGTGATTGGCCTGTGACTAAATCATCACATGAGATGCAAGTTGGGGTATGATGGAGTCAAGTTTTGCAACTTTGGG
ACCAAATCATCACATTGTGTGCAAGTTAGGATACCTGGT-TGCTATTACCTC----------------------------
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>chr5B_2
-GGGCGACGTTCCAGGGCGTGAGCTCGACGCGGACGCCGTAGCAGAACTTGGCCGCCGCCTCGAAGGTGCCCGGCCCGCC
GGGAAAGTCCGGGAAGGTGATGCGGTACGACTTCCCGTCATGAATCCTAACATGCTGCTGCTCCTCGTCCCCGTCCTCCT
CCTCTGCTTCCTCAATCTCTGTTTCCGCCGTAGCATGCTCTTCGACATTGCCTTCAGAACTCCCACTCCGCCGCCGCCGC
TGGCCCTCTAGACGCTGCTCGTCCTGCTCGGCAAGCATGCGGCTGATCTTGCGGCTCTTGGACATGAGCGGGAACTGCGC
ACGCAAGCACCAACTTCTCAGCGGAATTTCGTCGAGCACAGATTTAATTCAGGTGGGGG------------GTAACTGCG
GGTTGAATCAGTGAAACGGCAGGGGGGTTTGTGCAAAACTACAGGCGCTAACCGGCCGGGCCACTTGGCAGCCAATTGGC
GAGCTCTGATTGGCCTGGGACTAAAACATCACATTGGTTGCAAGTTGGGGTATGAGTTGATCTAGTTTTGCAACTTTGGG
ACTAGATCATCACATTGGGTGCAAGTTAGGATACCTGGGGTGCTATTACCTCTT--------------------------
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>chr2D_2
-GGGCGACGTTCCAGGGCGTGAGCTCGACGCGGACGCCGTATCAGAACTTGGCCGCCGCCTCGAAGGTGCCCGGCCCGCC
GGGAAAGTCCGGGAAGGTGATGCGGTACGCCTTGCCGTCATGCATCCTAACATGCTGCTGCTCCTCGTCCCCGTCCTCCT
CCTCTGCTTCCTCAATCTCTGTTTCCGCCGCAGCATGCTCTTCGACATTGCCTTCAGAACTCCCACGCCGACGCCGCCGC
TGGCTCGCTGGACGCTGCTCGTCCTGCTCGGCAAGCATGCGGCTGATCTTGCGGCTCTTGGACATGAGCGGGAACTGCGC
GCGCAAGCACCAACTTCTCAGCGGAATTTCGTCGAGCACAGATTTAATTCAGGTGTGCTAT-------------ACTGCG
ATTTGATTCAGGGAAACAACAGGGGGTTTTGTGCAAAAGTGTGCGCGCTGACGGGTCCAGCCACCTGGCAGCCAATTGGC
GAGCTGTGATTGGCCTGGGACTAAATCATCACATCAAGTGCAAGTTGAGGTATGGTTTGGTCAAGTTTTGCAAGTTTGGG
ACTAAATCATCACATCGTGTGCAAGTTAGGGTATCTGGGGTGCTATTACCTC----------------------------
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>chr4A_2
-GGGCGATGTTCCAGGGCGTGAGCTCGACGCGGACGCCGTAGCAGAACTTGGTCGCCGCCTCGAAGGTGCCCGGCCCGCC
GGGAAAGTCCGGGAAGGTGATGCGGTACGACTTGCCGTCATGCATCCTAATATGCTGCTGCTCCTCGTCCCCGTCCTCCT
CCTCTGCGTCCTCAATCTCTGTTTCCGCCGCAGCATGCTCTTCGACATTGCCTTCAGAACTCCCACGCCCACGCCGCCGC
TGGCCCGCTGGACGCTGCTCGTCCTGCTCGGCAAGCATGCGGCCGATCTTACGGCTCTTGGACATGAGCGAGAACTGCGC
GCGCAAGCACCAACTTCTCAGCGGAATTTCGTCGAGCACATATTTAATTCAGGTGTGCTAT-------------ACTGCG
GGTTGATTCAGGGAAAGAGCAGAGGGTTTTGTGC-AAAGTGCGCGCGTTGACCGGTCCAGCCACCTGGCAGCCAATTGGC
GAGTTGTGATTGGCCTGAGACTAAATCATCACATGAAGTGCAAGTTGAGTTATGGTTTGGTCAAGTTTTGCAAGTTTGAA
ACTAAATCATCACATTGTATGCAAATTAGGATACCTCGGGTGCTATTACCTC----------------------------
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--
>chr7D_54
------------------------------------------------------GCCGGCTCGAAGGTGCCCGACCCGCC
GGGAAAGTCCGGGAAGGTGATGCGGTACGACTTGCCGTCATGCATCCTAACATGTTGCTGTTCCTCGTCCCCGTCCTCCT
CCTCTGCTTCCTCAATCTTTGTTTCCGCCGCAGCATGCTCTTCGACATTGCCTTCAGAACTCCCACGCCGACGCCGCCGC
TGGCCCGCTGGACGCTGCTCGTCCTGCTCGGCAAGCATGCGGCTGATCTTGCGGCTCTTGGACATGAGCGGGAACTGCGC
GCGCAAGCACCAACTTCTCAGCGGAATTTCGTTGAGCACAGATTTAATTCAGGTGTGCTAT-------------ACTGCG
GGTTGATTCAGGGAAACAACAGGGGGTTTTGTGCAAAAGTGCGCGCGCTGACCGGTCCAGCCACCTGGCAGCCAATTGGC
GAGCTGTGATTGGCCTGGGACTAAATCATCACATGAAGTGCAAGTTGAGGTATGTTTTGGTCAAGTTTTGCAAGTTTGGG
ACTAAATCATCATATCGTGTGCAAGTTAGGGTACCTGGGGTGCTATTACCTCTT--------------------------
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>chr1B_607
CCTCCT--------------------------------------------------------------------------
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-----------------------------------------------------TCGAGAAACC-TTGCACTACCGACTTG
CCATCCAAGCCAGCCAAGCCGTGCAGACTTGCCACTAGCAGGCTAGCAGCAGCGCCCAGCATAGAAAGTACAAGGCGGCC
CCACAATCGACCGTCCAAAAATTTAGATGTGGACGCTCT-----CTGCCGAGTCACTGGCA-CGTCCCCACTTGCCACCT
GGCTACCCCACCTGTCACTGAGACGCGCGAGCCCCTGGCCAGTA-AGCCCGAGCCCGCCATATACGCTTTTGGGTCCCAT
GCCCGAGCGCGCTTTGGGACCCGCCATCTCTGCTCTTTTCCGGCCATCGCTCTGCTCTCTGCCCACGCACACCCGCCTAT
TTAACCGGTCTCGGATCGCAGCGTGGAGGATACCCAGCCTCGACGGCAAAACAATCCACCAACCTCTCCCCT-----CCC
TCTTCTCCCCCCGCCGGAAGAATGGCCACCAAGGGCTACCAGGCTCAAGCTCTGGCGATGCCCGCGGCGGGAGAGCGCGC
CGGTTCCGGC------GGCGGC------------AAAAAGGCGCCGACGGGGAGCACGTCGCTGCCGAGGCGTGGCCAGA
TCAAGGGGAAGATCATCAAGGATGCGGTCGCCGTGGTCGCCAGCCTTGCCGCGGGGCTCGTCCGCGCCGACAATAACGGG
GCCGGCGGCGGCGGTCTTCCGGCCGCCGGCGACGCCCACGCCAAGTGAACCGCCCCCGTTCTCCTCCACCCGCTAAGGTC
GATGTGCTCTCGTC----------------------------GGTCCTCTGTTGCTACTCTGTGCTCGTTTTA-GTGCAC
GCAGCAGAGGCCGGAGCAAAATACTACTAC---CGGTA------------------TTGT--TAAATTTCCGTCGCGTCA
GCGTCAG-------CGGTGGGCGGATTCAGTTGCCTTATTTGAGGTAGCAACTGATCTCTCCGTCCCTAGTTTCTGCGTC
TTGAGCTGGGTCCGTCTCGTTGATCTTCTTGCTGCTGCTGGTTGGTG-------GGTGAAGCCTCAGCTGCTAGCATCTC
GGGAGA-TT-GCGAA-----------------------------------------------------------------
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-------------------------------------------------------------------------------T
GTTTTAAAGTG-CAACCTCCTCATATGTTTGCCGCTGCGTCCTCATCTCCTCCTCGAGCAGGTCTGGTCGATCGTAGGTC
TTTTCTTCAGGTTGTGTGC----TGCTGCTTGCTTGGGTTTGGGT-----GTGTGCTCGTGTATGGGAGTATGGTACTGT
AAAAAGGAGGGACGGATCAGCAAGTAT--TATGGTCCGATCCGTCCTTCCTTTCTTGTGTGTGTGC--TTCTAGTATTAT
GG-CCCGTTCTTATCAAATCAATACTACTGGTTAC--TATATCTTAAGCATCT---------------------------
GGGATCGTGTTGA-TTAGAAACCCGTTTGATTTGGCCACCGGAGGATTCTGCTTCAAGTTCTATCACGTTTTTGCTTGAC
CTCTGCATTTCCATTTTGAGGTTGCTTAACCTCTGCATGGTGAGTGCAAAAGTTAGTCCCTTTCTATGTCCTGTCACCTG
CGTGCCGCAAGATAAAAATCGC---------------------------TCATAAGATTCCAAGGGAGAACAGAATAAAT
ATGAAAATGAAAAGGTGCTGATATTA--CACGCAGCAAGTGCACCTATAATGGAAAGCGTTCCTACCGGTTGCGCTCAAG
TCTTGATCCATCTCCCACAGACCTCGCTTGTCCAAGTCAAGTCTCCGCCCGCAATCAACTTGCTGCCGATGCCAAAATCC
C-
>chr1A_610
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---------------------------------------------------CTTCGAGAAACCTTTGCACTACCGACTTG
CCATCCAAGCCAGCCAAGCCGTCCGGACTTGCCA--------CTAGCAGCAGCGCCCAGCATAGAAAGTACAAGGCGGGC
CCACAATCGACCGTCCAAAA-TGCAGATATGGACGCGTT-----GTGCCGAGTCACTGGCA-CGTCCCCACTTGACACCT
GGCTACCCCACCCGTCACTGAGACGCGCGAGCTCCTGGCTGGTTGAGCCCGAGCCCGACATGTACGCTTTTGGGTCCCAT
GCCCGAGCGCGCTTTGGGACCCGCCACCTCTGCTCTTTTCCGGCCATCGCACTGCTCCCTGCCCACGCACAGCCGCCTAT
TTAACCGGTCTCGGACCACAGCCTGGAGGAT----------------------ATCCACCAACCTCTCCCCTCCCTGCCC
TCCTCTCCCCCCGCCGGAAGAATGGCCACCAAGGGCTACCAGGCTCAAGCCCCGGCGATGCCCGCGGCGGGAGAGCGCGC
CGGCTCCGGC------GGCGGC------------AACAAGGCGCCGACCGGGAGCAC------GCCGAGGCGCGGCCAGA
TCAAGGAGAAGATCATCAAGGACGTGATCACCGCGGTCACCAACCTGGCCGCCGGGCTCGTCCGCGCCGACAAGAACGAC
GCCAGCACGGGCGGTCTCCCGGCCGCCGGCGACGCCGACGCCAAGTGAACCGCCCCCGTTCTCCTGCAGCCGCT------
----------CGCC----------------------------CGTCCTCTGCTGCTACTCTGTGCTCATTTTA-GTGCGC
GCAGCAGAT-CCGGAGCAAAATACTACTAC---CGGTA------------------TTGT--TAAATTTCCGTCGCGTCA
GCGTCAG-------CGGTGGGCGGATTCAGTTGCCTTATTTGAGGTAGCAGCTGGTCTCCCCATCCCTAGTTTCTGCGTC
TTGAGCTGGGTCCGCCTCGGTGATCTTCTTCCTGCTGCTGGAGTGCTGGTTGGTGGTGAAGCCTCAGCTGCTGGCATCTC
GGGAGG-TTTGGGAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GTTTTTTAGTGCCGACCTCCCGATATGTTTGCCGCTGCGTCTTCATCTCCTCCCCGAGCAGGTCTGGTCGATCGTAGCTC
TTT-CTTCCCGTTGTGTGC----TGCTGCTTGCTAGGGTTTGATT-----GTGTGCCTGT--------GTACGGTGCTGT
AAAAAGAAGGGATGGATCAGCGAGTAT--TATGGTCCGATCCGTCCGTCCTTGCTTGTGTATGTGC--TCCTAGTATTGT
GGCTCCCTTCTTGTGAAATCAATACTACTGTACTGGTTACATATTAAGCACTT---------------------------
----CCGTGTTACTTTAGAAACCCGATTGATTTGGCTACCGGAGGATTCTGCTTCGAGTTCTATCACGTTTTTGCTTGAC
CTCTGCATTTCCTTTTTGAGGTTGCTTAACCTCTGCATGATGAGTGCA--------TCCCTTTCTATGTCCTCTCACCTG
CGTGCCGCTAGGAAAAAAGCGCTCAGATTTGATTGAGACACGACAGTCGTCATAAGATTGCAAGTTAGAACACAATAAAT
ATGAAAATGAAAAGGTGGTGATATTATGTACGAAGCACTGTTG----------------------------TCGCTCAAG
TCTTGATTCATCTCCCACAGACCTCGCTTGTCCAAGTCAAGTCTCCGC-CGCTATCAACTTGCTGCCGATGCCAAAAGCC
C-
>chr1D_611
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----------------------------------------------------TTCGAGAAACC-TTGCATTACCGACTTG
CCATCCAAGCC---------GTCCAGACTTGCCA--------CTAGCAGCAGCGCCCAGCATAGAAAGTACAAGGCGGGC
CCACAATCGACCGTCCAAAA-TTTAGATGTGGACGCGTACTGCCGTGCCGAGTCACTGGCA-CGTCCCCACTTGACACCT
GGCTACCCCACCTGTCACTGAGACGCGCGAGCTCCTGGCTGGGA-AGCCCGAGCCCGCCATATACGCTTTTGGGTCCCAT
GCCCGAGCGCGCTTTGGGACCCGCCATCTCTGCTCTTTTCCGGCCATCGCTCTGCTCTCTGGGCA--CACAGCCGTCTAT
TTAACCGGTCTCGGACCGCAGCCTGGAGAATATCCAGTCTCGACGGCGAAAAAATCCACCAACCTCTCCCCTCCCTGCCC
TCCTCTCGCCCCGCCGGAAGAATGGCCACCAAGGGCTACCAGGCTCAAGCCCCGGCGATGCCCGCGGCGGGAGGGTCCGC
CGGCTCCGGC------GGCGGC------------AACAAGGCGCCGACGGGGAGCAC------GCCGAGGCGCGGCCAGA
TCAAGGAGAGGATCATCAAGGACGTGATCACCGCGGTCACCAACCTGGCCGCCGGGCTCGCCCGCGCCGACAAGAACGGC
ACCGGCACCGGCGGCCTCCCGGCCGCCGGCGACGCCGACGCCAAGTGAACAGCCCCCGTTCTCCTGCAGCCGCT------
----------CGCC----------------------------CGTCGTCTGCTGCTACTCTGTGCTCATTTTA-GTGCAC
GCGGCAGAGGCCGGAGCAAAATACTACTCCTACTAGTA------------------TTGTTATAAATTTCCGTCGCGTCG
GCGTCAG-------TGGTGGGCGGATTCAGTTGCCTTATTTGAGGTAGCAACTGCTCTCTCCATCCCTAGTTTCTGAGTC
TTGAGCTGGGTCCGTCTTGGTGATCTTCTTGCCGC--------TGGTTGTTGGTGGTGAAGTCTTAGCTGCTAGCATCTC
GGGAGG-TT-GCGAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
GTTTTAAAGTG-CAACCTCCCGATATGTTTGCCGCTGCGTCTTCATCTCCTCGTCGAGCAGGTCTGGTCGATCGTAGCCA
-GGTCTTCAGGTTGTGTGC----TGCTGCTTGCTTGGGTTTGATT-----GTGTGCTTGT--------GTACGGTACTGT
AAAAAGGAGGGACGGATCAGCGAGTAT--TATGGTCCGACCCGTCTTTCCTTGCTTGTGTG------CTCCTAGTATTGT
GGTTCCCTTCTTGTGAAATCAGTAATACCGTACTGGTTATATATTAAGCATTT---------------------------
----TCGTGTTAA-TTAGAAACCCGTTTGATTTGGCCACCGGAGGATTCTGCTTCAAGTTTTATCACGTTTTTGCTTGAC
CTCTGCATTTCCTTTTTGAGCTTGCTTAACCTCTGCATGATGAGTGCAAAAGCTAGTCCCTTTCTATGTCCTGTCACCTG
CGTGCCGCAAGATAAAAATCGCTCCGCTTTGATTGAGGGACGACAATCGTCATAAGATTCCAAGGGAGAACAGAATAAAT
ATGAAAATGAAAAGGTGGTGATATTA--TACGAAGCA-------------------------------------------
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--
>chr1D_988
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-----------------------------------------------------------CCT------------------
-----------CGCCGGAAGAATGGCCACCAAGGGATACCAGGCTCCAGCCCCGGCGATGCCCGCGGCGGGAGGGGGCGC
CGGTTCCGGC------GGCGGCGGCGGCAGCGACAACAGGGTGCCGAAGGGGAGCATGCCGCTGCGTCGCCGCGGCCAGG
TCAAGGAGAAGATCATCAAGGACGTGGTCGCCGCGGTCGCCAACATGGCCGCGGGGCTCGTCCGCGCCGACAAGAACGGC
GCCGGCACCGGCGGTCTCCCGGCCGCCGGCGACGCCGGTGCCAAGTGAACAGCTCC------------------------
--TGTGTTCACGCC----------------------------CGTCCTCTGCTGCTACTCCGTGCTCATTTTTTGTGCGC
GCAGCAGAGGCCGGAGCAAAATACTACTACTACCGGTA------------------TTGTT--AAATTTCCGTCGCGTCG
GCGTCAG-------TGGTGGGCGGATTCAGTTGCCTTATTTGAGGTAGCAACTGGTCTCTCCATCCCTAGTT--------
--------------TCTCGATGATCTTCTCGCTGC--------TGCTGGTTGGTGATGAAGCCTCAGCTGCTGGCATCTC
GGGGGC--T-GCGAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
GTTTTTTAGTGCCAACCTACTGATATGTTTGCCGCTGCGTCTTCATCTCCTCCTCGAGCAGGTCTGGTCGATCGTACGTC
TGGTCTTCAGGTTGTGTGC----TGCTGCTTGCTTCGGTTTGATTGTGTTGTGTGCTTGT--------GTACGGTACTGT
AAAAAGGAGGGATGGATCAGCAAGTATTTTATGGTCCGATCCGTCCGTCCTTGCTTGTGTGTGTGTGCTCCTAGTATTAT
GGTTCCGTTCTTTATCAAA-------------------------------------------------------------
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--
>chr1B_994
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--------------CGGAAGAATGGCCACCAAGGGATACCAGGCTCCAGCTCCGGCGATGCCCGCGGCGGGAGGGGGCGC
CGGTTCCGGCAGCGGCGGCGGC------------AACAGGGCGCCGAAGGGGAGCATGCCGCTGCGTCGCCGCGGCCAGG
TCAAGGAAAAGATCATCAAGGACGTGGTCGCCGCGGTCGCCAACATGGCCGCGAGGCTCGTCCGCGCCGACAAGAACGGC
ACCGGCACCGGCGGTCTCCCGGCCGCCGGCGACGCCGGCGCCAAGTGAACAGCTCC------------------------
--TGTGTTCACGCC----------------------------CGTCCTCTGCTGCTATTCCGTGCTCATTTTTTGTGCGC
GCAGCAAATGCCGGAGCAAAATACTACTAC---CGGTA------------------TTGTT--AAATTTCGATGGCGTCA
GCGTCAG-------TGGTGGACGGATTCAGTTGCCTTATTTGAGGTAGCAACTGGTCTCTTCATCCG-------------
-------------GTCTCGGTGATCTTCTTGCTGC--------TGCTGGTTGGTGGTGAAGCCTCAGCTGCTAGCATCTC
GGGAGG-TT-GCGAAGGTTTTTTTTTTCCGAAACGGAGGCAAAAGATTTGCCTCATTCATTAAATAAGAGAGAAGAGTTT
TAGGGTGTTACAAGTGACCACACACACGGCATGGCAACTACTCGCGTACAATAATGGACCCCAGTTTTTTAGCACCCGCA
AGAACCCAAAGCTTGGCGTCATCGATGATAGTCCGGAGGAGGACCGGTGGTGGTGCACTCTTGCGACGGAAGACCCGAGC
GTTACGCTCGTTCCAGATTGTCCAAGAAACCAACATTGTAAGGGAGGCCAGGGCTCGTCGATCTGGGTCAAGTTGCGAAG
GTTTTAAAGCG-CAACCTCCTGATATGTTTGCCGCTGCTTCTTCATCTCCTCCTCAAGCAGGTCTGGTCGATCGTAGGTC
TTTTCTTCAGGTTGTGTGC----TGCTGCTTGCTTGGGTTTGATTTGAT----------T--------GTATGGTACTGT
AAAAAGGAGGGATGGATCAGCAAGTAT--TATGGTCCGATCCGTCCTTCCTTGCTTGTGTGTGTGCGCTCCTAGTATTGT
CGTTCCGTTATTTATCAAATC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S------------------------------------------------------SS---------S--------
--S--------------------------------S--------------------------------------------
-----------------------------------------------------------------S--------------
--------------S---------------------------------------S---S---------------------
-------------S------------------------------------S-----------------------------
------------------------------------------------------------S-------------------
--------S-----------------------------------------------------------------------
---------------------------------------------------S----------------------------
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
-----------------------------------S-SSSSSSSSSSSSSSSSSSS---------S--------------
-------SSSSSSS-------S------------------S---------------------------------------
--------------------S-----------------------------------------------------------
------S-----S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-----------------SSSSSS-----------S---------------------------------------------
-----------------S--------------------------------------------------------------
--------------------S--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
--------------------------------------------------------------------------------
-----------------S--------------S-----------------------------------------------
----S-----------S--S------------------------------------------------------------
--------------------------------------------------------------------------------
----S-------------------S-------------------------------------------------------
-S
>forward_1015
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CTCGCAGCGTGGAGGATAC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_2311
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTCGACAAAG
GGGATCGTGT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
