>input_sequence_85968
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ATGGAGATTTTTGAGCATGTCACTAAATTTATTTGTTATCCTAATGTCT
GTATTATATTGCTTCTTATTTATAGTGCATCTGATGGTGGCATCAGTTGAAAGACGAAGCTTTTCAAAGTTAAAAT-TAT
CAAAGAACTATTTGAGGTCAAGAATGACTAATGAGAATTTTAATGGCTTGGTATCAATGTGCGTCAAGAAGAAATTATTG
GAAGAGATTGACATGAACCTCATCAGAATTGAGTTTGCATA-A-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr7A_1_TraesCS7A01G428600
GAAAAAGACCGGTTCAGGAACCTACTAGAAGGTTCTCAAAACCGGAAAAACTGGCTGGAACCTTCCAGCAGGTTCCCAAA
ACCGGGATCGGTGGAACTCTTCTAATGGGCCGGCCCAAGCCGATCGATGGTTGGATATCCGTGTGCAAAACCACGACAGT
TCGACACAGTGAGCGTTAGCTAGGAAATTCCGGGCCTAGGAGATTCTGTTGGGGACGCAGCTGGAAATGCTCTAACTACT
CCATCGCCTTTTTTAGTAGAACTACTCCATCGCCTACTCCACCTGTTATAACAGTCTCCTTCCTCCGGTCCTCTCAACAT
CACCTCGGCCTCGCAGAGTCACACGCAGGCCCGGCCCTGAGGGGGGGC-AGGGGGGCGACCGCCCCGGGCCCCCCGAATC
CAGGGGGC-------------CCTCCCCAGATAGCCTGTGGGCTTGCGCTAGGAAAATCATGGGTCGTGGTCATGCGTGG
ACGCCGGCAGACGACGTATTGAGGCCTTCCTATTCCTTTTCTATTTTTGCGATTCGTTTCCTACTTTCCTCCACGTTCCA
TCACGTAGCCATCCTGAAATCATGCGGCATACC-TAATTCCAAGTTTCCAACTTGCATACACCGCCGCCGTCACTTCGCG
AAAAATCAAGGAGGTTAGATGCGTTGAAGCAGCCGTCCTGTTCGCGATAAG-AACTTGCGTCCCTGCTCATTTTCTTCAA
ATTTCGTTCCTAATTCTGATCAGCGGTACGTGGTCTCGCCGATTTCTATTCCGGGGCCTCCCAATCGCTCGAGTGTCTAG
CCAGTATTCAGAACGCGCTTTGCGCTCTCACCTTGGGCACTGGTCAAGCACACGCACATCATCGCCTATCCGTCGAGCTC
TAGAGCTAGACGCGAACAAGTACAAATCGCTGAATGCCCGATCGCCGATGCCGACTCATCCAAGGTAT------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTATAAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTTGTCTTTTTC----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGAATTATTAAAGATTA
TAAATTTCACATTGCCAGATGGTATAATGCTATGGAGATTTTTGAGCATGTCACTAAATTTATTTGTTATCCTAATGTCT
GTATTATATTGCTTCTTATTTATAGTGCATCTGATGGTGGCATCAGTTGAAAGACGAAGCTTTTCAAAGTTAAAAT-TAT
CAAAGAACTATTTGAGGTCAAGAATGACTAATGAGAATTTTAATGGCTTGGTATCAATGTGCGTCAAGAAGAAATTATTG
GAAGAGATTGACATGAACCTCATCAGAATTGAGTTTGCATA-AAAAA-TGATATAATTTTTTAAGGTAATATGTATAATT
TCTGCATATGTAT---ATTTTTGGATGCATTCAAATGTTTATATGTAAATTTTCATATATAAGTATAATTATTATTATTG
TATGTTGTTTATACTAGGGGCCCCGAAATTTAGTTTCGCCCCGGACCCTCAAAATCTCAGGACCGGCCACGGTCACACGG
AGACCCCTGAACCCCACGCAAGTTCTCGGGGCAGCGGCGGAGGAGATGTCGTACACCCACCTCTTCAAGTACATCGTCAT
CGGCGACGCAGGTCAGCTTTAGATGCTCCCTCGGTCGACCCCTTTCTCTTCCTGCTCGTTCCAGGAGGGGGTCCCTCATG
GATCCCCGAGCTCTTGGTTGCTCTCATTGCTTGGAAGATCTATCGCACCTGCCTTCATCCTGATTGCATGTGTGTGCAGG
TGTTGGCAAGTCATGCCTGCTGCTGCAGTTCACCGACAAGCGGTTTCAGCCCCTGCATGACCGCACCATCGACATCGAGT
TCGACGTCTTCGCCTCCAAGATGGTCATCGTCGACAGAAAGCCCATTAAGCTCCAGATCTGGGACACGGTATGACGGTGT
ATCCTCTTTCTCTGGGTGTGTCTAGATCGGGTGGGTCCTTGTACTGTAGTACAAATTAGTACCAACTGCAGATGGAAGGA
GTTGTCGCTTAAAAATATTTTATGAAATTTAGGATTATTATCGGAGCATGTTTGGGAATTAAGAGTCGCCATTTGTAGTG
GCTGATGCTTGGGTTCACCGTTGGTACTTGTGAGCTTCTGTCAGAGTGTTTTTCCTACTCCCGGGTGTACACTACGAAAT
CCTAAAGTTTCGATAATCCAAAAACACTACGGAGCTCTCGGGTCTGATTTTGCACATTGAAAAAACACTATGAAACAAAA
TCCAAAAATTCAGAAATTTTGCGACATCAAACATGACCAAATGTTTTAGATGTTTACAATTTTTTGTGAAGAAATAGCAT
TTGAGGA
>chr5A_339
TCACTCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CAGGCCCGGCCCTGAGGGGGGGC-AGGGGGGCGACCTCCCCGGGCCCCCCGAATC
CAGGGGCC-------------CCTCCCCAGATAGCCTGTGGGCTTGCGCTAGGAAAATCATGGGTCGTGGTCATGCGTGG
ACGCCGGCAGACGACGTATTGAGGCCTTCCTATTCCTTTTCTATTTTTGCGATTCGTTTCCTACTTTCCTCCATGTTCCA
TCACGTAGCCATCCTGAAATCATGCGGCATACC-TAATTCCAAGTTTCCAACTTGCATACACCGCCGGAGTCACTTCGCG
AAAAATTAAGGAGGTTAGATGCGTTGAAGCAGCCGTCCTGTTCGCGATAAG-AACTTGCGTCCCTGCTCATTTTCTTCAA
ATTCCGTTCCTAATTCTGATCAGCAGTACGTGGTCTCACCGATTTCTATTCCGGGGCCTCCCAATCGCTCGAGTGTCTAG
CCAGTATTCAGAACGCGCTTTGCGCTCTCACCTTGGGCACTGGTCAAGCACACGCACATCATCGCCGATCCGTCGAGCTC
TAGAGCTAGACGCGAACGAGTACAAATCGCTGAATGCCCGATCGCCGATGCCGACTCATCCAAGGTAT------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTATAAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTTGCCTTTTTC----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGAATTATTAAAGATTA
TAAATTTCACATTGCCAGATGGTATAATGCTATGGAGATTTTTGAGCATGTCACTAAATTTATTTGTTATCCTAATGTTT
GTATTATATTGCATCTTATTTATAGTGCATCTGACGGTGGCATCAGTTTAAAGACGAAGCTTTTCAAAGTTAAAAT-TAT
CAAAGAACTATTTGAGGTCAAGAATGACTAATGAGAATTTTAATGGCTTGGTATCAATGTGCGTCAAGAAGAAATTATTG
AAAGAGATTGACATGAACCTCATCAGAATTGAGTTTGCATA-AAAAA-TGATATAATTTTTTAAGGTAATATGTATAATT
TCTGCATATGTAT---TTTTTTGGATGCATTCAAGTGTTCATATGTAAATTTTCATATATAAGTATAATCATTATTATTG
TATGTTGTTTATACTAGGGGCCCCGAAATTTAGTTTCGCCCCGGGCCCCCAAAATCTTATGACCGGCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr7D_343
ACT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CAGGCCCGGCCCTGAGGGGGGGCAGGGGGGGCGACCGCCCCGGGCCCCCCGAATC
CAGGGGCC-------------CCTCCCCAGATAGCCTGTGGGCTTGCGCTAAGAAAACCATGGGCCGTGGCCAGAAGTGG
ACGCCG---GAAGACGTATCGAGGCCTTCCTATCCCTTTTCTATTCTTGCGATTCG--------ATTCCTTCAGGTTCCA
TCACGTAGCCATCCTCAAATCACGCGGCATACC-TAATTCCAAGTTTCGAACCTGCATACACCGCCGCCGTCACTTCGCG
AAAAATCAAGGAGGAGAGATGCGGAGTAGCAGCCGTCCTGTTCGCGATAAG-AACTTGAGTCCCTGCTCATTTTCTTCAA
ATTCCGTTCCTAATTCTGATCAGCAGTATGTCGTCTCGCCGATTTCTATTCCGGGGCCTCCCAATCGCTCGAGTGTCTAG
CCAGTATTCAGAACGTGCTTTGCTCTCTCACCTTGGGCACTGGACAAGCACACGCACATCATCGCTGATCCATCGAGCTC
TAGAGCCAGACGCGAACGAGTACAAATCGCTGAATGCCCGATGGCCGATGCCGACTCATCCAAGGTACTTCCTTCATTCC
TAAATATTTGTCTGTCCAGAGATTTCAATAAGTGACTACATACGGAGCAAAATGAGTGAATCTACACTCTAGAGTATGTC
TACATACATCCGTATATGGTAGTCCATTTGAAATCTCTAAAAAGACAAATATTTAGGAACGGAGGGAGTAGATTATATTA
TCGTTCTTATCCCT--------CTATACGTACATTACTAATTAAGTATTTTATCC-TCGCATACATGATGCATAGCTCGC
ATCCTTCAACCGTTGACATCAACATCAGGGGAACTAATGTTAGTGTGTTTTAGAGTACAGTTAATTCATTGGGGGGCA-C
ATGCACAATCTGCTAGTGTTCATGAACATCCAGTTTTGCCTTTTTC----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGAATTATTAAAGATTC
TAAATTTCACATTGCCAGATGGTATAGTGCTATGGAGATTTTTGAGCATGTCACTGAATTTAATTGTTATCCTAATGTCT
CTATTATATTGCATCTTATTTATAGTGCATCTGACGGTGTCATCAGTTGAAAGACGAAGCTTTTCAAAGTTAAAAT-TAT
CAATGAACTATCTGAGGTCAAGAATGACTAATGAGAATTTTAATGGCTTGGCATCAATATGCGTCAAGAAGAAATTATTG
GAAGAGATTGACATGGACCTCATCAGAAGTGACTTTGCATC-GAAAAGTGATATAATTTTTTAAGGTAATATGTATAATT
ATTGCATATGTATATTA-TTTTGGATGCATTCAAGTGTTCATATGTAAATTTTCACATATAATTATAATCATTAT-ATTT
TATGTTGTTTATAATAGGGGCCCCGGAATTTAGTTTCGCCCCGGGCCCCCAAAATCTCAGGACCGGCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr4A_346
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CAGGCCCGGCCCTGAGGGGGG-C-AGGGGGGCGACCACCCCGGGCCCCCCGAATC
CAGGGGCC-------------CCTCCCCAGATAGCCTGTGGGCTTGCGCTAGGAAAATCATGGGCCGTGGTCATGCGTGG
ACGCCGACAGACGACGTATTGAGGCCTTCCTATTCCTTTTCTATTTTTGCGATTCGTTTCCTACTTTCCTCCACGTTCCA
TCATGTAGCCATCCTGAAATCATGCGGCATACC-TAATTCCTAGTTTCCAACTTGCATACACCGCCGCCGTCACTTCGCG
AAAAATCAAGGAGGTTAGATGCGTTGAAGCAGCCGTCCTGTTCGCGATAAG-AACTTGCGTCCCTGCTCATTTTCTTCAA
ATTCCGTTCCTAATTCTGATCAGCAGTACGTGGTCTCGCCGATTTCTATTCCGGGGCCTCCCAATCGCTCGAGTGTCTAG
CCAGTATTCAGAACGCGCTTTGCGCTCTCACCTTGGGCACTGGTCAAGCACACGCACATCATCGCCGATCCGTCGAGCTC
TAGAGCTAGACGCGAACGAGTACAAATCGCTGAATGCCCGATCGCCGATGCCGACTCATCCAAGGTAT------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTATAAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTTGCCTTTTTC----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGAATTATTAAAGATTA
TAAATTTCACATTGCCAGATGGTATAATGCTATGGAGATTTTTGAGCATGTCACTAAATTTATTTGTTATCCTAATGTCT
GTATTATATTGCATCTTATTTATAGTGCATCTGACGGTGGCATCAGTTGAAAGACGAAGCTTTTCAAAGTTAAAAT-TAT
CAAAGAACTATTTGAGGTCAAGAATGACTAATGAGAATTTTAATGGTTTGGTATCAATGTACGTCAAGAAGAAATTATTG
GAAGAGATTGACATGAACCTCATCAGAATTGAGTTTGCATA-AAAAA-TGATATAATTTTTTAAGGTAATATGTATAATT
TCTGCATATGTAT---TTTTTTGGATGCATTCAAATGTTCATATGTAAATTTTCATATATAAGTATAATCATTATTATTG
TATGTTGTTTATACTAGGGGCCCCGAAATTTAATTTCGCCCCGGACCCCCAAAATCTCAGGACCGGCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr4A_346
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CAGGCCCGGCCCTGAGGGGGGGC-AGGGGGGCGACCGCCCCGGGCCCCCCGAATC
CAGGGGCC-------------CCTCCCCAGATAGCCTGTGGGCTTGCGTTAGGAAAATCATGGGCCATGGTCATGCGTGG
ACGCCGGCAGACGACGTATTGAGGCTTTCCTATTTCTTTTCTATTTTTGCGATTCGTTTCCTATTTTCCTCCACGTTCCA
TCACGTAGCCATTGTGAAATCATGCGGCATACC-TAATTCCAAGTTTCCAACTTGCATACACCGCCACCGTCACTTCGCG
AAAAATCAAGGAGGTTAGATGCGTTGGAACAGCCGTCCTGTTCGCGATAAG-AACTTGCGTCCCTGCTCATTTTCTTTAA
ATTCCATTCCTAATTCTGATCAGCAGTACGTGGTCTCGCCGATTTCTATTCCGGGGCCTCCCAATCGCTCGAGTGTCTAG
CCAGTATTCAGAACGCGCTTTGCGCTCTCACCTTGGGCACTGGTCAAGCACACGCACATCATCGCCGATCCGTCGAGCTC
TAGAGCTAGACGCGAACGAGTACAAATCGCTGAATGCCCGATCGCCGATGCCGACTCATCCAAGGTAT------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTATAAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTTGCCTTTTTC----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TAAATTATTAAAGATTA
TAAATTTCACATTGCCAGATGGTA--ATGCTATGGAGATTTTTGAGCATGTCACTAAATATATTTGTTATCCTAATGTCT
GTATTATATTGCATCTTATTTATAGTGCATCTGATGGTGGCATCAGTTGAAAGACGAAGCTTTTCAAAGTTAAAAT-TAT
CAAAGAACTATTTGAGGTCAAGAATGACTAATGAGAATTTTAATGGCTTGGTATCAATGTGCGTCAAGAAGAAATTATTG
AAAGAGATTGACATGAACTTCATCAGAATTGAGTTTGCATA-AAAAA-TGATATAATTTTTTAAGGTAAA----------
-----------------TTTTCATATGTATTCAAGTGTTCATATGTAAATTTTCATATATAAGTATAATCATTATTATTG
TATGTTGTTTATACTAGGGGCTCCGAAATTTAGTTTCGCCCCGGGCCCCCAAAATCTCAGGACCGGCCCTGGTC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr7B_346
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CAGGCCCGACCCTGAGGGGGG-C-GGGGGGGCGACCGCCCCGGGCCCCCCGAATC
CAGGGGCC-------------CCT-------------GTGGGCTTGGGCTAAGAAGACCATGGGTCGTGGCTAGGCATGG
ATGCCG---GAAGACGTATCGAGGCCTTCATATTCCTTTTCTATTTTTCTGATTCG--------TTTCCTTCACGTTCCA
TCACG---CCATCCTTAAATCACACGGCATA-C-CAATTACAAGTTTCCAACCTGCATACACCACCGTCGTCACTTCACG
AAAAATCAAGGAG---AGATGCGAAGTAGCAGCCGTCCTGTCCGCGATAAGAAACTTGCTTCCCTGCTCATTTTCTTCAA
ATTCAGTTCCTA-----TATCAGCAGTACGTCGTCTCGCCGATTTCTATTCCGGGGCCTCCCAATCGCTCGACAGTCTAG
CCAGTATTCATAACGCGCTTTGCTCTCTCACCTTGGGCACTAGACAAGCAAACGCACATCATCGCCGATCAGTCGAGCTC
TAGAACCAGACGAGAACAAGTACAAATCGCTGAATGCCCGATTGCCGATGCCGACTCATCCAAGGTAT------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTATATTA
TCGTTCTTATACCTCTATATGACTATACGTACATTACTAATTAAGTATTTTATCCCTCGCATACACAATCTGC-------
-------------------------------------------------------TACAGTTAATTCATTGGGGGGCGGC
ATGCACAATCTGCTAGTGTTGATGAACATCCAGTCTTGCCTTTTTC----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGAATTATTAAAGATTC
TAAATTTCACATTGCCAAATGGTATAATGCTATGGAGATTTTTTAAGCATTCACTGAATTTAATTGTTATCCTAATGTCT
CTATTATATTGCATCTTATTTATAGTGCATCTGATAGTGGCATCAGTTGAAATACGGAGCTTTTCAAAGTTAAAAAGTAT
CAATGAACTATTTGAGGTCAAAAATGACTAACGAGAACTTTAATTTCCTGGCATCAATATGCATCAAGAAGAAATTATTG
GAAGAGATTGACATGAACCTCATCAGAAGTGACTTTGCGTCGAAAAA-TAATATAAATTTTGAAGGTAATATGTATAACT
ATTGCATATGTATATATTTTTTAGATGCATTCGAGTGTACATATGTGAATTTTCGTATATAAGTATAATCATTATTATTT
TATGTTTTTTATACTAGGGGCCCCGAAATTTAGTTTTGCCCCGGGCCCCCAAAAGCACAGGACCGGCCCTGGTC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr7A_347
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------AGGCCCGGCCCTAAGGGGGGGCAGGGGGGGCGACCGCCCCGGGCCCCCCGAATC
CAGGGGCC-------------CCTCCCCAGATAGCCTGTGGGCTTGCGCTAGGAAAACCATGGGCCGTGGCCAGGCGTGG
ACGCCGGCAGATGACGTATCGAGGCCTTCGTATTTCTTTTCTATTTTTGGGATTCGTTTTCTACTTTCCTTCACGTTCCA
TCACGTAGCCATCCTGAAATCATGCGGCATA-C-TAATTCCAAGTTTCCAACCTGCATACACCGCCGCCGTCACTTTGCG
AAAAATCAAGGAGGTTAGATGCGGAGAAGCAGCCGTCCTGTTCGCGATAAG-AACTTGCGTCCCTGCTTATTTTCTTCAA
ATTCCGTTCCTAATTCTGATCAGCAGTACGTGGTCTCGCCGATTTCTATTCCGGGGCCTCCCAATCGCTCGAGTGTCTAG
CCAGTATTCAGAACACGCTTTGCGCTCTCACCTTGGGCACTGGACAAGCACACGCACATCATCGCCGATCCGTCGAGCTC
TAGAGCCGGACGTGAACGAGTACAAATCGCTGAATACCCGATCGCCGATGCCGACTCATCCAAGGTAT------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTATATTA
TTGTTCTTATCCCTCTATA--------CATACATTACTAATTAAGTATTTTATCCCTCGCATACATGATGCATAGCTCGC
ATCCTTCAACCGTTGACATCAACATCGGGGGAATTAATGTTAGTGTGTTTGAGAGTACAGTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATTGTTAAAGATTA
TAAATTTCACATTGCCAGATGGTATAATTCTATGGAGATTTTTGAGCATGTCACTGAATTTATTTGTGATCCTAATGTCT
GTATTATATTGCGTCTTATTTATAGTGCATCTGACGGTGGCATCAGTTGAAAGACGAAGCTTTTCAAAGTTAAAAT-TAT
CAAAGAACTATTTGAGGTCAAGAATGACTAATGAGAATTTTAATGGCTTGGCATCAATGTGCGTCAAGAAGAAATTATTG
GAAGAGATTGACATGAACCTCATCAGAATTGAGTTTGCATTGAAAAA-TGATATAATTTTTTAAGGTAATATGTATAATT
TCTGCATATGCAT---TTTTTTGGATGCATTCAAGTGTTCATATGTAAATTTTCATATATAAGTATAATCAATATTATTG
TATGTTGTTTATACTAGGGGCCCCGAAATTTAGTTTCGCTCCGGGCCCCCAAAATCTCAAGACCGGCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr3D_386
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GGGCCCGCCGAATC
CAGGGGCTCCTCCCCAGATAGCCT-------------GTGGGCTTGCGCTAAGAAAACCATGGGCCGTGGCCAGAAGTGG
ACGCCG---GAAGACGTATCGAGGCCTTCCTATTCCTTTCCTATTCTTGCGATTCG--------ATTCCTTCAGGTTCCA
TCACGTAGCCATCCTCAAATCACGCGGCATA-CCTAATTCCAAGTTTCGAACCTGCATACACCGCCGCCGTCACTTCGCG
AAAAATCAAGGAGGAGAAATGCGGAGTAGCAGCCCTCCTGTTCGCGATAAG-AACTTGCGTCCCTGCTCATTTTCTTCAA
ATTCCGTTCCTAATTCTGATCAGCAGTATGTCGTCTCGCCGATTTCTATTCCGGGGCCTCCCAATCGCTCGAGTGTCTAG
CCACTATTCAGAACGTGCTTTGCTCTCTCACCTTGGGCACTGGACAAGCACACGCACATCATCGCTGATCCATCGAGCTC
TAGAGCCAGACGCGAACGAGTACAAATCGCTGAATGCCCGATGGCCGATGCCGACTCATCCAAGGTA-------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AGTAGATTATATTA
TCGTTCTTATCCCTCTATA--------CGTACATTACTAATTAAGTATTTTAT-CCTCGCATACATGATGCATAGCTCGC
ATCCTGCAACCGTTGACATCAACATC-GGGGAACTAATGTTAGTGTGTTTGAGAGTACAGTTAATTCATTGGGGGGCA-C
ATGCACAATCTGCTAGTGTTCATGAACATCCAGTTTTGCCTTTTTC----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGAATTATTAAAGATTC
TAAATTTCACATTGCCAGATGGTATAGTGCTATGGAGATTTTTGAGCATGTCACTAAATTTAATTGTTATCCTAATGTCT
CTATTATATTGCATCTTATTTATAGTGCATCTGACAGTGTCATCAGTTGAAAGACGAAGATTTTCAAAGTTAAAAT-TAT
CAATGAACTATCTGAGGTCAAGAATGACTAATGAGAATTTTAATGGCTTGGCATCAATATGCGTCAAGAAGAAATTATTG
GAAGAGATTGACATGGACCTCATCAGAAGTGACTTTGCATCGAAAAG-TGATATAATTTTTTAAGGTAATATGTATAATT
ATTGCATATGTATATTA-TTTTGGATGCATTCAAGTGTTCATATGTAAATTTTCATATATAATTATAATCATTAT-ATTT
TATGTTGTTTATAATAGGGGCCCCGAAATTTAGTTTCGCCCCGGGCCCCCAAAATCTCAGGACCGGCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr1D_418
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TAGCCTGTGGGCTTGCGCTAAGAAAACTATGGGCCATGGCCAGGCGTGG
ATTTCG---GAAGACGTAGCGAAGCCTTCGTATTCCTTT-CTATTTCTGTGATTCG--------TTTCCTTGTCATTCCA
TCAGGCAGCCATCGTCAAATCATGCGCCGTA-CCTAATTT--------CAACCTGCATACCCCGCAGCCGTCACTTGGCG
AAAAATCAAGGAGGAGAGATGCGGAGTAGCCGCCATCCTGTTCGCGATAAC-AGCTTGCCTCCCGCCTCATTTTCTCCAA
ATTTCGTTCCTAATTCTTATCGGCAGTACGTCGTCTCGCCGATTTCTATTCCGGGGCCTCCCAATCGCGCGAGTGTCTAG
CCAGTATTCAGTACACGCTTTGCTCTCTCACCTTGGGCGCTGGACAAGCACACACACATCATCGCTGATCCGTCCAGCTC
TTGAGCCGGACGCGAACGAGTACAAATCATTGAACGCCCGATCGCCGACGCCGACCCATCCAAGGTACTATT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTATATT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-----------------------------S----------
------------------------------------------------S-------------------SS----SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS
>forward_220
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------AGATTCTGTTGGGGACGCAG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>reverse_2068
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AGTACATCGTCAT
CGGCGAC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
