>input_sequence_85932
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ATGTCGTCCATGGACTGCACGATCCATGTGGTGCTGGGGGT
GGTCATGCGGAGGAGCATCTGCCGGCTGCACGAAGTCGTCGCCATGGCCGTGGAGCTCGGCACGGCGCTGCTTGTGGCCG
TGCGGTTCTCCGGCATGGCCTTCCGCCGCACGCGAGCCCCGACTCAGGTG---------------------GTATCGGGG
TCGACTCACTATTACTACTACGCCCCCGTGGCGGCCTCCATGGTTGGCATGTCCAGGCTCGACAGGCACTAG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>chr3A_1_TraesCS3A01G505800
CATGGATGCACCACGGCGTGCATATAGAGATTCTCTAAACATACAACCATGATGTGGCCATTGAGTAACTGAAATGACGA
CATGCACACATGGTA-----------GGATCTGATATACAGTACCTAGCTCTTTTGTCAATAGAACATGGTACTATGCCT
AGTTATAATAATCGAGTGCAACTGCGCAAGCTTACGGATGTCCACATTTGATGAGATGCCACAAATTGGTGTTAATTAAT
TAAGCAATTCAGCCAA------------------------------AAAATAATAAAGAAATCCATTCTGTCAAAAATTA
ATAATCAGCCAGTCCTTTCTCTGTGCTCGAAACTACTCCATCTTTT-------TCCAAGACATGCACATATTCCAATATC
TAAATTTACCTAACAATTAGACTTGCAAATGTGAAAAATATATGTGAAACACAAATGGCATCAGTGAAAAATACTTATGA
AT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATTAATCCAAAGATC------GTATCATTTTTGTGTCACTTGACT---ACTTTTCTAGTTAAATTGTTGGCA
AAACATATTTTTCTGTTGCCGTGTACACCTTGCATTTTTA-GATGACGGAGTAGCCACAACTACAAGTCGTACTACCTAA
ATGTTCTGGAAAGAAAGTGAGAAATTGAAAACAAAACTTTGTCCTGTTTTCATGCATTCCTCTCCTTGCCCCAACACGCT
TACTGTGTGATTAACTATTTTTTGGACAATG-AAAACATTAACTAATTTCATTGTTTAAGGTTTACAAATAGTAAGTTGG
TAAAAATTCATGAATCTACATAACCCGCATCGATCCATCAGAGGGCCATCGGCATCACAT--ACACTAGCTACCAAATCT
ATATTGGAAGGTA---GATGACAAAAGCAACAGACCTGCCGTCTAAAACACACGCCGCAAGCTAGCTAGATCCATCGAAC
ACAC---------AACGCCAGGCTTCCAAAGAAAACTAACTAGCTAGAAAGAAGCTAGGTCGTCGGCACCGGCGAGGGTC
GATCTCACATTTGACGCCGGCCGTCTGGCCGGCCGACCGATGTCGTCCATGGACTGCACGATCCATGTGGTGCTGGGGGT
GGTCATGCGGAGGAGCATCTGCCGGCTGCACGAAGTCGTCGCCATGGCCGTGGAGCTCGGCACGGCGCTGCTTGTGGCCG
TGCGGTTCTCCGGCATGGCCTTCCGCCGCACGCGAGCCCCGACTCAGGTG---------------------GTATCGGGG
TCGACTCACTATTACTACTACGCCCCCGTGGCGGCCTCCATGGTTGGCATGTCCAGGCTCGACAGGCACTAGTC------
ACCGGTGAGCTACACCCCTCTGGATTTGATGTCTAATCAATCGTGTTTTT-----TTTGTGAGTAATAATGAAATTCAGT
GCTTGATTAGCTACA------CATGTGCACTGTATATTGAGCAATATATGTGTTCATCATGATATCGGCATAGTAATTGA
TCACTCTCACATCAATTTGGGAGC-AAATGGTGGTGATTAATTGGATC-TTCGTCAGGTGCCCACT--------TTTGTG
ATGACTCCAGGGTTATACCCCCCTTTGGGGAAAAAA-TGGTGTCCATTTGTGTTTCTTTCTTCGCTTGCTAGCTCATTTT
TGTTTTGAGGATTCATGATTCACTATTAT---------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GTCATTATGTGTAAATGGTA----ACTAAGC
CTATAATTCTCCAGTGGTTTATAGAATGCATATAGCAGATATGAGATATCAGAAGCAGAATGGAGAGAGAACAGACAAGA
ATTAGTTACTCTGA---ATACAGCAATAGAGTGCATCCTATATAGGTGGATCTTCTTCCTTGCTAATGTCCATGTTTTAT
CGTTCGGGTTCTTATTAATCGCTGGTTATGCATGTGATGTATTATCAATTTGCGGATATTGCTCG---TAGTCCAACTAA
TTTTGTTCACTGAGAATTAATTACCGGATTCTTTGTGTGTTGTTTCTGTATATTGTTCACGGTACTTGTGATTTCTGAAA
TGTTTGATCTACTAGCTTGTAATCAAAGATAGTAATGCACTAGTTTGTTGTAAGAAAATTGAACATAAAGCCTCACAATT
---TTTGTTACTTGATTCAGTAATCATACCACTTAGGATTGTAAGCATTCATTAATTTCTTATACTACATCTCTCTAAGG
CGAGGCTTCCAAAACTAGGTCATTTAATTGGTTTCTCTAAGTTGTATCAAAGTACATTGTTTTTTT-AGATCTGTTTCAT
TAATTACCTGATGTGCCATGTAATCTATTTGCAACAGCTCGTGGTGCGTTGGTTGCGAAATAACAAACTGTTCAACTTTA
TTTTTGTTCGCACC
>chr3B_1
CATGGATGCACCACGGAGTGCATATAGAGATTCTCTGAACATACAACCATGATGTGGCCATTGAGTAACTGAGATGACGA
CATGCACACATGGTA-----------GGATCTGATATACAATACCTAGCTCTTTTGTCAATAGAACATGGTACTATGCCT
AGTTATAATAATCGAGTGCAACTGCGCAAGCTTACGGATGTCCACATTTGATGAGATGCCACAAATTGGTGTTAATTAAT
TAGGCAATTCAGCCAAA-----------------------------AAATAAAAAAAGATATCCATTCTTTAAAAAATTA
ATAATCAGCCAGTCCTTTCTCTGTGCTCGAAACTACTCCCTCCTTTCCAAGAATCTAAGACATGCACATATTCCAAGATC
TAAATTCACTTAGCAATTAGACTTGTAAATGTGAAAATAATATGTGAAACACAAATGGCATCTGTGAAAAATACTTATGA
AT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATGAATCCAAAGATCATAGGTGTACCATCTTTGTGTCACTTGACTTGTACTTTTCTAGTTAAATTGTTGGTA
AAACATAATTTTCTGTTGCCATGTACGCCTTGCATTTTTA-GATGACGGATTAGCCATAACTACAAGTCGTACTACCTAA
ATGTTCTGAAAAGAAAGAGAGAAATTGAAAACAAAACTTTGTCATGTTTTCATGCATTC--CTACTTGCTCCAACATGCT
TAC--TGTGATTAACTATTTTTTGGACAATG-AAA-CATTAACTAATTCCGTTGTTTAAGGCTTACAAATAGTAAGTTGG
TAAAAATTCATGGATCTACACAACTCGCATAGATACATCAGACGGCCATCGGCATCACAT--ACACTAGCTACCAAATCT
ATATTGGAAGGTA---GATGACAGAAGCAACCTACCTGCCGTCTAAAACACACGCCGCGAGCTAGCTAGATCGATCGAAC
ACAC---------AACGCTAGGCTTCCAAAGAAAACTTACTAGCTGGAGAGAAGCTA-GTCGTCGGCACCGGCGAGGGTC
GATCTCACCTTTGACGCCGGCCGGCTGGCCGGCCAACCGATGTCGTCCATGGACTGTGCGATCCACGTGGTGCTGGGGGT
GGTCATGCGGAGGAGCATCTGCCGGCTGCACGAAGTCGTCGCCATGGCTGTGGAGCTCGGCACGGCGCTGCTAGTGGCCG
TGCGGTTCTCCGGCATGGCCTTCCGCCGCACGCCAACCCCGACACAGGTG---------------------GTCTCGGGG
TCGACTCACTACTACTACTATGCCCCCGTGGCCGCCTCCATGGTTGGCATGTCCAGGCTCGACAGGCACTAGTC------
ACCGGTGAGCTACACCCCTCTGGATTTGATGGCTAATCAATCGTGTTTTT-----TTTGTGAGTAATAATGAAATTCAGT
GCTTGTTAGCT---------ACATGTGCACTGCA-------CAATATATGTGTTCATCATGATATCGACATAGTAATTGA
TCACTCTTGCATGTATTTGAGAGC-AAATGGTGGTGATTAATTGGATC-TTGGTCAGGTGCCCACT--------TTTGTG
ATGACTCCAGGGTTATACCCCCCTT--GGGAAAAAA-CGGTGTCCATTTGTGTTTCTTTCTTCTCTTGATAGCTCGTTTT
TGTTTTGAGGATTCATGATTCACTATTAT---------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GTAATTATGTGTAAAC-GGTAACTACTAAAC
CTATAATCCTCCAGTGGTTTATAGAATGCATATAACAGATATGAGATATCAAAAGTAGAATCGAGAGAGAACAGACACGA
ATTTGTAACTCTGA---ATATAGCAATAGAGTGCATCCTACATAGGTGGATCTTCTTCTTTGTTGATGTCCAGGTTTTAT
CATTCGGGTTGTTATTCATCGCTGCTTATGCATGTGAAGTATTATCAATTTGCGGATATTTCTCCTAGTAGTCCAACTAA
TTTAGTTCACCGAGAACTAATTACCGGATTCTTGGTGTGTTGTTTCTGTATATTGTTCACTGTGCATGTGATTTCTGAAG
TGTTTGATCTACTAGCCTGTAATCAAAGATTATAATGCACTAGTTTGTTATAAGAAAATTGTACAGAAAACATCACAACT
---TTTGTTACTTGATTCAGTAATAATACCACTTAGGATTGTAAGCATTCATGAATTTCTTATACTACATCTCTCTAAGG
CGAGGCTTCCAAAACTAGGTC-TTTAATTGGTTTCTCTAAGTTGTATCAAAGTACCTTGTTT-TTT-AGATTTGTTTCAT
CAATTACCCGACGTGCCATGTAATCTA-TTGCAACAGCTTGTGATGCATTGGTTGTGAAATATCAAACTGTTCAGCTTTA
TTTTTTTCGCACC-
>chr3D_1
CATGGATGCATCTCGGCGTGCATATAGAGATTCTCTAAACATACAACCATGATGAGGCCATTGAGTAACTGAGATGACGA
CATGCACACATGGTA-----------GGATCTGATATACAGTACT---------------TAGATCATGGTACTATGCCT
AGTTATAATAATCCAGTGCAACTGCGCAAGCTTAGGGATGTCCACATTTGAGGAGCTGCCACAAATTGGTGTTATTTAAT
TAAGCAATTCTTTTTTTTTCCGGAGAATTAATTAAGCAAGTCAGCCAAAAAAATTAAGAAATACATTCTGTCAAAAATTA
ATTATCAGCCAGTCCTTTCTCTGTGCTCGAAACTACTCCCACCCTTCCAAGAATCTAAGGCATGCACATATTCCAAGATC
TAAATTAACCTAACAATTAGACAAAATTG---------------------------------------------------
-T------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATGAATCCAAGGATC------ATATCATTTTTGTGTCACTTGACTCGTACTTTTCTAGTTAAATTGTTGGTA
AAACATAATTTTCTGTTGCCGTGGACGCCTTGCATTTTTA-GATGACGGAGTAGCCACAACTACAAGTCGTACTACCTAA
ATGTTCTGGAAAGAAAGAGAGAAATTGAAAACAAAACTTTGTCCTGTTTCCATGCATTC--CTCCTTGCCCCAACATGCT
TACTGTG--ATTAATTTTTTTTCGGACAATGAAAA-CATTAACTAATTTCATTGTTTAAGGTTTACAAATAGTAAGTTGG
TAAAAATTCATGGATCTACATAACCTGCATCGATCCATCAGACGGCCATCGGCATCACAT--ACACTAGCTACCAAATCT
ATATTGGAAGGTA---GATGACAAAAGCAACAGACCTGCCGTCTAAAACACACGCCACAAGCTAGCTAGATCAATCGAAC
ACAC---------AACGCTAGGCTTCCAAAGGAAACTAACTAGCTACAGAGAAGCTAGGTCGTCGGCACCGGCGAGGGTC
GATCTCACCTTTGACGCCGGCCGGCTGGCCGGCCAACCGATGCCGTCCATGGACTGCGCGATCCACGTGGTGCTGCGGGT
GGTCATGCGGAGGAGCATCTGCCGGCTGCACGAGGTCGTCGCCATGGCCGTGGAGCTCGGCACGGCGCTGCTCGTGGCCG
TGCGGTTCTCCGGCATGGCCTTCCGCCGCACGCCAGCCCCGACTCAGGTG---------------------GTCTCCGGG
TCGACTCACTATTACTACTACGCCCCCGTGGCGGCCTCCATGGTTGGCATGTCCAGGCTCGACAGGCACTAGTC------
ACCGGTGAGCTACATCCCGCTGGATTTGATGGCTAATCAATCGTGTTTTTTTTATTTTGTGAGTAATAATGAAATTCAGT
ACTTGATTAGCTACATACACACATGTGCACTGTATATTAAGCAGTATATGTGTTCATCATGATATCGACATAGTAATTGA
TCACTCTCGCATCAATTTGGGAGC-AAATGGTGGTGATTAATTGGATCTTTGGTCAGGTGTCCACT--------TTTGTG
ATGACTCCAGGGTTATACCCCCCCTTGGG--AAAAA-TGGTGTCCATTTGTGTTTCTTTCTTTGCTTGCTAGCTCATTTT
TGTTTTGCGGATTCATGATTCACTATTAT---------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GTAATCATGTGCAAATGGTA----ACTAAGC
CTATAATTCTCCAGTGGTTTATAGAATACATA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>chr3D_1
CATGGATGCACCTTGGCGTGC-TATAAAAATTCTTTAAACATACAACCATGATGTGGCCATTGAGTAACTGAGATGACGA
CATGCACACATGGATTATTGCTGGTCGGATCTGATATTGAGAACCTAGCTCTTTTGTCGGTAGAACATAGTACTATGCCT
AGTTATAATAATCTAGTGCAACTGCGCAAGCTTAGGGATGTCCACATTTGATGATCTGCCACAAATTGGTGTTCTGTAGT
TAAGAAATTCTTCTAAA-----------------------------AATTAATTTAAGAAATCCATTCTGTCAAAATTTG
ATAATG----------------------------------------------------GGCATACACATATTGCAAATAT
GA------------------------------------AATATGTGAAACACAAATGACATCACTGAAAA-TACTTATGA
AT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACAATTCCCATGAGC------ATATTATTTTTGTGTCATG----------------------ATTATTGGTC
AAACATAATATTCTGTCTT-GTGTACGCCTTGCATTTTTTGGATGAGGAAGTAGCCATAACTACAAGTCATACTAACTAA
TTTAAAAAAAACTATTAAACAAATTTTTAAA-------------------------------------------------
-------------------------------AAAC-TATTAAACAAATTCAGGCAAAT---TTTAAAAATGGTAAGTTAG
TAATTTTTCATGGATCTACACAACTTGCATCGGTCCATCAGACGGCCATCGGCATCACGTACACACTAGGTACCAATTCT
ATATTGAAAGGTAGTAGATGACAAAAGCAACCTACCTGCCGTGTAAAACACACGCCGCGAGCTAGCTAGTTCGATCGAAC
ACACAACTAAATTAACGCCAGGCTTCCAAAGAAAAG---CTAGCTAGAGAGCAGCTAGGTCGTCGACACCGGCGAGG-TC
GATCTCGCCTTTGCCGCAGGCCGAT------------CGATGTCCACCATGGACTGCGTGATCCATGTGGTGCTGGGGGT
GGCCATGCGGAGGTGCATCTGCCGGCTGCACGAGGTCGTCGCCATGGCGATGGAGGTCGGCACGGCGCTGCTCGTGGCCG
TACGGTTCTCCGGCATGGCCTTCCGCCACACACCAGCGCCGACTCAGGCGGTCTCGGGGTCGACTCAGGCAGTCTCGGGG
TCGACGCACTACTACTACTACGCCCCCGTGGCTGCCTCCATGGTTGGCATGTCCCGGCTCGACAGGCACTAGCACTGGGG
ACCGGTGAGCTACACCCCTCTGGATTTGATGGCTAATCAATCGTGTA-TTTTTATTTAGTGAGTAATAATGAAATTCAGT
GCTTGATTAGCTACATACACACATGCGCACTGTATATTAAGCAATATATGTGTTCATCTTGATATCGATATAGTAATTGA
TCAGTCTCGCATGC-------------ATGGTGGTGATTAATTGGATC-TTGGTCAGGTGTTCACTATTGTGAATTTGTG
ATGACTCCAGGGTTATACCCTCCTTTGGG--AAAAAACGGTGTCCATTTGTGTTTCTTTCTTTGCTTGCTAGCTCGTTTT
TGTTTTGGGGATTCATGATTCACTATTAT---------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GTAATCATGTGTGGACTAATTA---------
----AATCCTCCAGTGGTTTAGAATATAT----------------ATAGCACAAGAAGAATCGAGAGATAACAGACAAGA
ATTAGTTATTTCTGAATATATAGCACTAGACTGCATCCTGCATAGGTGAATCTTCTTCCTTGC--ATGTTCGTGTTTTAT
CGCTGGGGTTGTCATTAATCGCTGCTTATGCATGTGATGTGCTATCAATTTGTGGATATTGTTCGTAATAGTCCAACTAA
TGTAGTTCATTGAGAACTAATTACTGAATTCTTGCTATGTTGTTTCTGCATATTCTTAGCTGTACGTGTGGCTACTGAAA
TGTTTGATCTACTAGACTGTAATCAAAGATTAAAGTGCACTAGTTTGTTATAAGCAAATCATATATAAAACATCATAGCT
TTATTTGTTACTCCTATACATCTCTA---------------------------------------TACATCTCTCCCAGG
CGAGGCTTCGTAAACTCGGTCATTTAATTGGTTTCTCTAAGTTGTATCAAAATACCTTTTTTTTCTAAGATTTGTTTCAT
TAATTACCTGACGTCCCATCTTATCTACTCCCAACAGCTCGCCATGCCTTGATTTTGAAATAACAAAATGTTCAAGTGTA
TTT-----------
>chr2A_1
CATGGATGCACCACGGCGTGCATATAGAGATTCTCTAAACATACAACCATGATGTGGCCATTGAGTAACTGTAATGACGA
CATGCACACATGGTA-----------GGATCTGATATACAGTACCTAGCTCTTGTGTCAATAGAACATGGTACTATGCCT
AGTTATAATAATCGAGTGCAACTGCGCAAGCTTACGGATATCCACATTTGATGAGATGCCACAAATTGGTGTTAATTAAT
TAAGCAATTCAGCCAA------------------------------AAAATAATAAAGAAATCCATTCTGTCAAAAAATA
ATAATCAGCCAGTCCTTTCTCTGTGCTCGAAACTACTCCATCCTTT-------TCCAAGACATGCACATATTCCAATATC
TAAATTTACCTAACAATTAGACTTGCAAATGTGAAAAATATATGTGAAACACAAATGGCATCAGTGAAAAATACTTATGA
ATATCTCTACTATTAAAGGAGGATCGAACGTCGTGATGGTTCGACCACATCCCCACCTCCCCCCTTCGTACGACAACCAT
CGCGCGCGAGGGCTATGCCCGCAGCAGCCCAAAAATCCAACTCCAAACCAGCCCACGCACAGAAAACCACGACCAAGAAA
AAAACAGTTCGGCTCAACCCACAAACGAGATGCATGGCATTAATGCGGTAAGAAAACACTGGAAAATAGCCAAGACCGAC
TCCCCACGACGCACGCCCCAACTCTCTCCAACCCCCTCCTCTTCTTTCTTAGTTGGAGTCAGCCCAACTCCTCCAACCCC
ATCGATTCCAATCTCATCTCTCCCGAGAAACTTCAGTGGACTCGGTCGTGGCGACGAGGGGTGATGGCTCGCCCTCTCAC
CGTTGAGTCCTGCTCCGTCTCTGCCCTCCATCCACTTGCTCCAAGATGTCTTTCGCGGCCGGCAGCTTCCCCGATTTGGG
GTTGTGGCAGCTGTGAAGTATGCGAGGAGGGTGTGCGTCCTCCTGTATGAGAATCCGACGGGTCGTCTTCATCGCAGGCG
GCTACGGCGAGGACCAACAGCTCAAACTTGACGCCCTTTGCCTCCGTCAAGGACAGTGTCACAGGTGCGTAGATCTTTGA
TCTTTTCCTTCGATGCCATTGTCTGATTGTCTCCGTTCCTGTGAAACCAGTATTCCGCCTGGCCGGCGCTTTCGCTCGAT
GGCAAAACGAACACATAGCAAACCTGGTTTGCCTTAAGGGGTTAAATCAGCTAACAATGTAGCTAGCTAGCTTTGCCTTG
AGATGGATCCAATTGGTGGATTGATTGATCGACTAGCAGGTGGATTCTATTGATCGACTAGCAACGCACGCGCACACTGG
TATGTGACGTATTTACTGTTTATACTTCAACTCACGGTGATAAAACCTAGGAGCTACATGTATCACCTTTCTAAGTAGAA
TTAGAATTTCTATATTACTCTGGACAAGCAATCGTTGGTGAAATCTGGCTATATGCATGTGAGATCTATAGGCACCCAAC
AGAGAGAACTATCAAGCTGCTGATTTCACCATTTTATCTAGAGTTCTAGACTCATTGTGCTAATTCAAGTAGTGCTAAGC
AATCATCTAACCTAACTATTAGTCTATTACTAGATTTATTGATATAGTTCATGTTTTGCTGCTTTTCCATTTTTTGCGAA
TGGAGCGGATTCTGAAATCGCATGTGTTCAATTAGGTTTTGATCGGTCAGCTTGAGTAGTAATTGTTTTTATTGTCCCAT
TTGTTCTTTCATATAGGCTACCTTGCTATGTTGTACTATAAGATACTTCATATAGGAGGTCAAGCTTAAGGTACAATTCT
CAACTTGTCGAGAATCATGATAATCATGATATTTGCCTGCTTCAAAATGCTCCTGAGGTGTTAGTTGACAGTCCTCTGAA
TATTATTTGTTTGTTGGTTTTTTTTACAGAATTTGACCATTTGTGCAGGCTTTCGTTCATCATGGATCGACCTTAGTCTT
AACGATTACCCTATCAAACATGCAACCCCTGTGATGTGGTGCTCAATCCTGCTATTTCTTAGTCCATTAGTTTTTATGCG
TTTCAACCTCAGAGATTTTATTAATTTTCAGTTGGTTTCTAACTAGAGATGCACATAAATAACTTTGTTCTGATTTTCAT
AAAAGAAATATGGCATGCACCTAGCTAGAGGTTATTGACTATATGTTGCAACCCATTTTATTATGTTGGTCTTTCTTGAC
ACCATTTTCTATTGTAGGTTATTGAACATAAACAACAAGAGAATGAACAGAAGTGTGTTTGGGTGAGGCCCGGATACAAC
ATCTCACTTCTTGTTTTTGGAAATCATATATACTTAATTCCAAGAGGTCACCAGCTAAAGGGATGGTACAATATGATTTA
TTTTTTTGTCACTAAGCTTGACAATATCTCACCAACTGTAGCAGTAATGTGACTCGATCTGTAGGTTGTGCTTGGCAATG
AAATAGAAATTTTGCTGCTAAGGTATCGAGGTACGTACAAAAATATTGCCTGTTTTCGTTTGTATGGTTGTGGTCATAGT
CTATTTTATGCCTGTATAATTTCCTGTGGTTGTGAACTATATTCAGCTCCACATAGAAATCGAAGATTAATCTTGTTTAA
TCCTTTGAGTGTATACTAAAGTTCCTGTTACTCTAGCAAGCAATTAATTGACTTACCGAAGAACTACATGGAAGAGAGAT
ATGTTTGATTTGTTTTGAACTGATTGCAAGAAATATATGTATGACACCTACAACTCTGTTCTCAAAACATATAGGAAAAT
GTGTGGAGATGGCACGCCGGCCGGAGTTTTGGCCGTTCGCCCGCTACCACGCGCTCCTGTTTCCGCAAGCCCCGCAAATC
GCGCTGCCCTGCTGCAGGCCAATCTCATCTGCGAGGCCGCTCTTTACCCTTGCATCCCCACCCCCTCCCCACCCCCTGTT
GCAGCCCAATTTCGCCGACGAGGCCGTCGTCCACCCCCGCATCGGCCCCTACCTCGCTGCAGCCCAATCTCACCGGTGAG
GTCGTCGTCCTTCGCATGGCCGGCGATTCTCCTAGCTCACCATCTCCAGTTCCTCTCCGCACGGCCAGCGATAGCTCCTA
GCTCACCATCTCGGCGAGGTACACCCAAGGCACGAGAAGCTGTGACGACGGGGTGCACCTGACATGGGGATGGGATGGGC
GAGGACATCACCGGAGCTGCAAGCTACAACCGGCATCACAAATTGCTACAACCGGCGTCCTTGTTCGCTACATGCTATCA
TGAAGATGCATCCCGTGGAACAAAAATCTACAACTGGCAAAAGAAAAATCTACAACTCGCTGACCATTGTTCGCTACATG
GCCTGTGGTGAGCATCGGGGCTGCGACGATGGGCCGTGGCCTGTGGAAGCTGCAAACTCATGCGCCAGTGCTGCAACCGC
CCTAGAAAAAGCTACAACCAGCGGCCAGTTTTTGTTGCATCGGCGACGGTGATTTTTTTGGCATGTGAGGTAGATGACTG
CTACTGGCGACCAAGGAAGATGCATCCCGCTGAAGAAAATGCTACAACCGGCAACAGAAAAAGCTACAACTCGCGGCTAT
ATATGTTGCAAGCGGCGATGTTGAAGTTTTGGCCGCCGATGCTACGACCAAAAAAGCTGGAACCGACGATTTCTTTTGCT
ACCATCGTCGGAGCAAAAAAACGTGACATCGGCGATCCAAGAGAGGTTGTAACGACGAGCAGCTGGGTACTGCGACGAGC
GGCAACGGTGAGGGAAAGGACGCGGGTGCTTTCGCGTCTCGTCGGAGCACACACTCGTGGTGGCTGGGGCAGGGACATGT
CACTGGCGGATCTGAACCAAGACGCGTGCGCGGGGTAGAGGGGGAAGAAGATCATGACATGGGGGAAGGCGGATCGGACG
GCCCCTGCCTGCTGGATCGGGCGGCAGGAGGCCGACCGGCCCAAATTTGGGTTGGCGCGCCGGCGCGTATCACCGCTCAA
ACATATTGTTATGAAATATTTGATTTATTTTGAGCAATGTCTCATGTCTAAGTCTATTGTTCCGTGGCAACGCACGGGCA
TTCAGCTAATTAATCTAAAGATC------GTATCATTTTTGTGTCACTTGACT---ACTTTTCTAGTTAAATTGTTGGCA
AAACATAATTTTCTGTTGCCGTGTACACCTTGCATTTTTA-GATGACGGAGTAGCCACAACTACAAGTCGTACTACCTAA
ATGTTCTGGAAAGAAAGAGAGAAATTGAAAACAAAACTTTGTCCTGTTTTCATGCATTCCTCTCCTTGCCCCAACACGCT
TACTGTGTGATTAACTATTTTTTGGACAATGAAGA-CATTAACTAATTTCATTGTTTAAGGTTTACAAATAGTAAGTTGG
TAAAAATTCATGAATCTACATAACCCGCATCGATCCATCAGACGGCCATCGGCATCACAT--ACACTAGCTACCAAATCT
ATATTGGAAGGTA---GATGACAAAAGCAACAGACCTGCCGTCTAAAACACACGCCGCAAGCTAGCTAGCTAGACCGAAC
ACAC---------AACGCCAGGCTTCCAAAGAAAACTAACTAGCTAGAAAGAAGCTAGGTCGTCGGCACCGGCGAGGGTC
GATCTCACATTTGACGCCGGCCGTCTGGCCGGCCGACCGATGTCGTCCATGGACTGCGCGATCCATGTGGTGCTGGGGGT
GGTCATGCGGAGGAGCATCTGCCGGCTGCACGAAGTCGTCGCCATGGCCGTGGAGCTCGGCACGGCGCTGCTTGTGGCCG
TGCGGTTCTCCGGCATGGCCTTCCGCCGCACGCGAGCCCCGACTCAGGTG---------------------GTATCGGGG
TCGACTCACTATTACTACTACGCCCCCGTGGCGGCCTCCATGGTTGGCATGTCCAGGCTCGACAGGCACTAGTC------
ACCGGTGAGCTACACCCCTCTGGATTTGATGTCTAATCAATCGTGTTTTTTTAC-TTTGTGAGTAATAATGAAATTCAGT
GGTTGATTAGCTACATACACACACGTGCACTGTATGTTAAGCAATATATGTGTTCATCATGATATCGACATAGTAATTGA
TCACTCTCGCATGCATTTGAGAGCAAAATGGTGGTGATTAATTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATAAGAGTGTTTA
GATCACTAAAATAGTGATCTAAACACTTTTATATTAGTTTACAGAGGGAGTAATTAAGTGTAAAC-GTA----ACTAAGC
CTATAATCCTCTAGTGGTTTATAGAATACATATAGCAGATATGAGATATCAGAAGCAGAATCGAGAGAGAACAGACAAGA
ATTAGTTACTCTGA---ATACAGCAATAGAGTGCATCCTACATAGGTGGATCTTCTTCCTTGCCAATGTCCATGTTTTAT
CGTTCGGGTTGTTATTAATCGCTGGTTATTCATGTGATGTATTATCAATTTGCGGATATTGCTCG---TAGTCCAACGAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
-----------------------------------S--------------------------------------------
------------------------------------------S-------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S----------------------------S------------
--------S------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
-------------------------------------------------------------S------------------
----------------------------------------S---------------------------------------
----------S---------------------------------------------------------------------
---S------------S----------------S--------------------------S----S--------------
----------------S-------------SS-----------------S-----------S-------S-S------S-
------------------------S---------------------------S---------------------------
-------------------------------------------------------S---------------S--------
-----------S---------------S---------------S---S-------S------------------------
-----S-SSSSS-S
>forward_4443
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CCCGCATCGATCCATCAGAG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>reverse_6124
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GTGCGTTGGTTGCGAAATAAC----------------
--------------
