>input_sequence_85919
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------------------------------------------------------------ATGGCGAGCACGGTGGAGTC
GCCGACGAGCTCGTGCGTGTCGTCGGACACGGAGGAGGAGGCCGCGGCGGTGACGAAGCCGATGGTGGTGGTGGGGTGCC
CGCAGTGCCTCATGTACGTGATGCTGTCGGGGGCGGCGGAGGAGCAGCCCAGGTGCCCCCGGTGCAAGAGCCCCGTGCTG
CTGCACTTCCTCCACGGCGCTGCCGCCGCCGCCGCCGCCAGCACCAACAGGCAGCAGCCCAGCAAGAGCTAG--------
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>chr2B_1_TraesCS2B01G400400
ATTGCGCTTACAAAAGCAACACTTGGCAGGAAAATAACTAGGGAAAAGAGCAAACATAAACTAATTAGATAGAAAAGGAG
CGAAAAAAGATTGGTGGATTAGACTCCCTTTCTTTCCATGGTTTGTATCTCTACTCTTATAAAAAAACTGAGTTGGTGAT
GATGGTGTGTCTGCCATCCCGCAGTATAGACCGTCCGATCTATATCTGATGCATAGAAAGCAAACTATGACAATTTTGCA
AAAAGATACCCGCACCCCTCTCCACATTTGCAGATAAAGCCTTACCTCGTTCATCTTTGTCTCACACAAGATAAACAACT
CGTATACATGCATCTTGATGTTTCGTGCAACACATGGGCCTCTTGGTAGTTAAAAATACAACACGCTATTCTGACCATAT
TGCACTATCATCATTTGATAAACCGCGAAAATGCTTCTTCTCTTTGATTCAAGTATATAAATACAAATAGGAAAATTTGA
AGGATATTTAGGAAAACATAAATTTCATCAACAATACTCGTGAAATGTTTAATGATTTGAACGTATCAGCAGAATTTTTG
GATTAACTTGATTAATCATCCTGACCAAGATCGA----TGGATTACAAAAAATATTTT-------------ATTCTCAGA
TTCTATCCGAGGGGTTTGCGATCTTTTTAAAAATCTCATCCTCGCTAGGGAATTATCTTATCCGAAAG-AAAAAGATCTT
GGTAGGAATACAGGAAAAAGTAAATCGAGTCCAGCGAGACATGGGAGGTTCTTGGATTCAAGTGCTGGCCATGCCGTCCC
CCTTCCTCCCGAGGGCACAGCACTATATATAGCAGGTTGCGCCATTCTCCCGAAACACAAACATAGCTCCTCTCCTCCTG
TGCGCGCTCACCGCTGCACAGTATCCACCCATAAG--AGCATATAGGCGCAGTGCAACAGGATCATCAGTACGGGTTGCA
CTAGCTTATTAGGCTAGCGGCTAGCGAGGGAGTAGGCAGGCACTGCGCAGGAGCTGATCCATGGCGAGCACGGTGGAGTC
GCCGACGAGCTCGTGCGTGTCGTCGGACACGGAGGAGGAGGCCGCGGCGGTGACGAAGCCGATGGTGGTGGTGGGGTGCC
CGCAGTGCCTCATGTACGTGATGCTGTCGGGGGCGGCGGAGGAGCAGCCCAGGTGCCCCCGGTGCAAGAGCCCCGTGCTG
CTGCACTTCCTCCACGGCGCTGCCGCCGCCGCCGCCGCCAGCACCAACAGGCAGCAGCCCAGCAAGAGCTAGCCAGCCAA
CATGCTGCTGCTTGGTCGCTGCATGCTGCTTGCTGATCAGCCGCTAGCTTCTCCTGCCATCGATCTCCACCATGTTCTAA
CTCGTGTATTCTGCTGCACTATGTAGCTCTTCTTT--------TTTCCCTTTTCGTCGACGATAGTAATTTCCATGCGAG
TAA--CTCTCAAGAAGACAAGAACGCAAATCTTTTACAGCCTGGTGCAATTGGCTCGGTTTTACTCTCG-CTTAGCAGTG
GCTGTCCTTCTCCAACAACCTTTAGATGTA-----TGCACGTGTTCTGCACCGTGAAGGTCGATGTCTGTTTTAATCCCC
TCCTTAATTTCGGTTTGAATAAGATGAGATTTCATTAAGAAAGTCGTTTGCAATGTACCGTGTAACCGGGGACTCTTCTC
GCTCATCTCTTAATTGGGTTGCATGACTACTCCCTACTTTAAATTAATTTTGTTGAG---GAATAAAGATGGGTTCGTGA
CCAACGGACCATTCAACCTCCAGCTAGCTATGGCAGCGTAGCCCGGATGGTGACCGGAAAGGATCAAAGTAAAGAGGCGG
GGGATCGATCGACTGAGTTATTGTGATGGATGGATGGGTGCATGGAGCAATCGGCCGCTCATGGAAAACCTGTGCCCGTT
TTAATTGGGGATCATCA---AGTATAGTAGATGCATGGAGTAGCAGCAGATA--CAGAATAAATACGGGCAATAATTAGG
AGCAGTTGAGGGGAGGAATC-GGGCTTATTTAGCACGCACGCCAGTTCGTCATCAAGCGGTCATTTACATCCACCGTCCT
CCTTTGCCTTCTTTTTCTTCGCGTCCTTCCCGTGCCATTGGGAAAGGGCCATGCCAAAAGGACACGGTGGGTGAAATTGC
CTCCCAGGATGAACACT----CTCGGTACTAATCCACACAAAAAATAGC--TAAAAGTGGAAATAAAATCTGAATGTCCG
AGTAATTTTCAGGAAAGTAGTTTGTGTTTTGTGTCCTTGATAGAGAAAACAAAATCCTTGCGA
>chr2A_510
AACATATT------------------------------------------------------------------------
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---------------------------------------GTGAAACGTTTAATTATTTAAATGTATCAGCAGAATTTTTG
GATCCATTCGGTTAATCATCCTAACCAAGATCGATTGTTGGATTACAAAAAATATTTTT------------ATTCTCAGA
TTCTATCCGAAGGGTTTGCGATCGTCGTAG-AAATCTCGCTACCA----GAATTACATTGTCCGAGAGAAAAAAGATCTT
TGTAGGAATAAAGGAAAACGTAAATCAGGTCCAGCGAGACAGGGGAGGTTCTTGCATTCAAGTGCTGGCCATGCCGTCCC
CCTTCCTCCCGAGGGCACAGCACTATATATAGCAGGCTGCGCCATTCTCCCGAAACACAAACATAGCTCCTCTCCTCCTG
TGCGCGCTCACCGTTGCACAGTATCCATCCATAACCAACCATAAGAGCGCAGCGCAACAGG---ATCAGTACGGGTTGCG
CTAGCTTATTAGGCAAGCGAGGGAGT----AGTAGGCAGGCACTGTGCAGGAGGTGATCCATGGCAAGCACGGTGGAGTC
GCCGACGAGCTCGTGCGTGTCGTCGGACACGGAGGAGGAGGCCGCGGCGGTGACGAAGCCGATGGTGGTGGTGGGGTGCC
CGCAGTGCCTCATGTACGTGATGCTGTCGGGGGCGGCCGAGGAGCAGCCCAGGTGCCCCCGGTGCAAGAGCCCCGTGCTG
CTGCACTTCCTCCACGGCGC---CGCCGCCGACGTCGCCAGCACCAACAGGCAGCAGCCCAGCAAGAGCTAGCCAGCCAA
GATGCCGCTGCTTGGTCTCTGCGTGCTGCCTGCTGATCAACCGCTAACTTCTCCTGCCATCGATCTCCACCATGTTCTAA
CTCGTGTATTCTGATGCACTCTGTATTC-----TT--------TTTCCATTTTCGTCGACGAT-----------------
--------------------------AAATCTTTTACAGCCTGGTGCAATTGGTTCGGTTTTACTGTCTG-TTAGCAGTG
GCTGTCCTTCTCCAACAACCTTTAGATGTACTGTATGCACGTGTTCTGCACCGTGAAGGTCGATGTCTGTTTTAATCCCC
TCCTTAATTTTGGTTTGAATAAGATGAGATTTCATTAAGAAAGTCGTTTGCAATGTACCGTGTAACCGGGGACTCTTCCC
GCTCATCTCTTAATTGGGTTGCATGACTACCCCCTACTTTAAATTAATTCTGCTAAAGAAGAATAAAGATGGGTTCGTGA
CCAACGGACCATTCAACCTCCGGCTAGCTATGGCAGCGTAGCCCGGATGGTGACCGGAAAGGATCAAAGTAAAGAGACGG
GGGATCGATCGACTGAGTTATTGTGATGGATGGATGGGTGCATGGAGCAATCGGCCGCTCATGGAAAACCTGTGCCCGTT
TTAATTGGGGATCATCAAGTAGTATAGTAGATGCATGGAGTAGCAGCAGATA--CAGAATAAATACGGGCAATAATTAGG
AGCAGTTGAGGGGAGGAATCC-GGCTTATTTAGCACGCACGCCAGTTCGTCATCAAGCGGTCATTTACATCCACCGTCCT
CCTTTGCCTTCTTTTTCTTGGCGTCCTTCCCGTGCCAT--------------GCCAAAAGGACACGGTGGGTGAAAGTGC
CTCCCAGGATGAACACTAGTACTCGGTACTAATCCACACAAAAATACCTAGTAAAAGTGAAAATAAAATCTGAATGCCTG
AGTAATTTTCAGGAAAGTAGTTTGTGTTTTGTGTCCTTGATGGAAACAACAAAATC-------
>chr2D_521
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----------------------------------------TGAAATGTTTACTTATTTAAATGTATCAGCACAGTTTTTG
GATTCATTCGGTTAATCACCCTAACCAAGATCGATTGTTGGATTACAAAAAATATTTTTATTCTAAGTTTTATTCTCAGA
TTCTATCTGAAGGGTTTGCGATCGTTGTACAAAATCTCTCTACAA----GAATTATCTTGTCCGAAAGAAAAAAGATCTT
TGTAGGAATACACGAAAAAGTAAATCGGGTCCAGCGAGACAGGGGTGGTTCTTGCATTCAAGTGCTGGCCATGCCGTCCC
CCTTCCTCCCCAGGGCACAGCACTATATATAGCAGGTTGCGCCATTCTCCCGAAACACAAACATAGCTCCTCTCCTCCTG
TGCGCGCTCACCGCTGCACAGTATCCACCCATAAG--AGCATATAGGCGCAGTGCAACACG---ATCAGTACGGGCTGCG
CTAGCTTCTTAGT-------CTAGCGAGGGAGCAGGCGGGCACTGTGCAGGAGGTGATCCATGGCGAGCACGGTGGAGTC
TCCGACGAGCTCGTGCGTGTCGTCGGACACGGAGGAGGAGGCCGCGGCGGTGACGAAGCCGATGGTGGTGGTGGGGTGCC
CGCAGTGCCTCATGTACGTGATGCTGTCGGGGGCGGCCGAGGAGCAGCCCCGGTGCCCCCGGTGCAAGAGCCCCGTGCTG
CTGCACTTCCTCCACGGCGC---CGTCGCCGACGCCGCCAGCACCAACAGGCAGCAGCCCAGCAAGAGCTAGCCAGCCAA
GATGCTGCCGCTTGGTCGCTGCATGCTGCTTGCTGATCAATCGCTAGCTTCTCCCGTCATCGATCTCCACCATGTTCTAA
CTCGTGTATTCTGATGCACCCTGTATTC-----TTGTTTTTTTTTTTCCTTTTCGTCGACG---GTAAATTCCATGCGAG
TAGAGCTCTCAAGAAGACAAGAACAC-AATCTTTTACAGCCTGGTGCAATTGGTTCCGTTTTTACTGTCTCTTAGCAGTG
GCTGTCCTTCTCCAACAACCTTTAGATGTA-----TGCACGTGTTCTGCACCGTGAAGGTTGATATCTGTTTTAATCTGC
TCCTTAATTTTGGTTTGAATAAGATGAGATTTCATTAAGAAAGTCGTTTGCAATGTACCGTGTAGCCGGGGACTCTTCTT
GCTCATCTCTTAATTGGGTTGCATGACTACTCCCTACTTTAATTTAATTTCGTTGAG---GAATAAAGATGGGTTCGTGA
C----GGACCATTCAACCTCCAGCTAGCTATGGCAACGTAGCCCGGATGGTGACGGGAAAAGATCAAAGTAAAGAGGCGG
GGGAT----CGACTGAGTTATTGTGATGGATGGATGGGTGCATGGAGCAATCGGCCGCTCATGGAAAACCTGTGCCCGTT
TTAATTGGGGATCATCA---AGTATAGTAGATGCATGGAGTAGCAGCGGATATACAGAATAAATACGGGCAATAATTAGG
AGCAGTTGAGGGGAGGAATCGGGGCTTATTTAGCGCGCACGCCAGTTCGTCATCAAGCGGTCATTTACATCCACCGTCCT
CCTTTGCCGCCTTTTTCTTCGCGTCCTTCCCGTGCCATTGG-AAAGGGCCATGCCAACAGGACACGGTGGGTGAAATTGC
CTCCCGGGATGAACACTACTCGGCACTACTAATCCACACAAAAATAGCTAAAAA----GAAAATAAAATCTTAATGTCTG
AGTAATTTTCAGGAAAGTAG-TTTTTTTGTGTGTCCTTGATAGAAAAAACAAAATC-------
>SNPs
-SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S----S--S------------------
----S-S-S-S-----------S---------------------------------------------------------
----------S------------S--S--S---SSSSS--SS-SSSSSS----------S--------------------
S--------------------------S-------------S------------S-------------------------
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-------------------------------------------------------------SSS---------------S
--------------S----S-------------------------S-------S--------------------------
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-------------------------------------S------------------------------------------
--------------------SSS--------S------------------------------------------------
S--------------------------------------S----------------------------------------
-------------S------S----SSSSSSSS------------------------------S----S-----------
--S---------------------S----------------------------S-----------S--S-----------
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----------S---------------------------------------------------------------------
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-----------------------------------------S--------------------------------------
--------------------------------------------SSSSS----------S------------------S-
--------------------------------------------S-----------SSSSSSS
>forward_192
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------------GCCATCCCGCAGTATAGACC------------------------------------------------
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>reverse_1281
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CATGCTGCTGCTTGGTCG--------------------------------------------------------------
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