>input_sequence_85909
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--------------------ATGGCCAAGGCTCGCGTACTCCGCTGTGCGG--------TGCTGATGGTGTGCGCGCTCC
TAGTTCTCTCGTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------CGAGGCGGCTGGCCGGCAAAGGGGTCATGG
GAGAGAGGCCACGGCGGCGCCGGCAGCGATGGCAATGGCGAGAGGGCGTTTTGTCACGAAGGTGCTGCGGGAGGAGATGG
TTCAGGCGAATGGCCAGGGTGGCATTGGCGAGTCTAAGAGGACCAGTCCGGGCGGCCCAGACCCGCAGCATCATTAG---
--------------------------------------------------------------------------------
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----------------------------------------
>chr1D_1_TraesCS1D01G401600
CACCTGGTTAGATTAGCCTAACTACTAATTATGTTCACTAATTTGTAAAATGTTTAAAAGCCTGAGAAATTTTCTTGAGA
CTGACATACGGGCCTCACATATGTCATAACAGTAAATTAACGGAGTTGACTATGCTGCCACGTAAACGCTTACATGTGGG
CCAACTCTGTCATAATCGAGTTTAATTTCGACTCAATCAGTCCCTAACATGAAGTGGTAGTTTTTTGCCAAAAAAATAGA
CTCGGAGTGTTTTTTTAATAAAGTTTGCAAAGTGGTGGTTTTTTCGCCATGGTTGGTCGAATTGTCGTAGTTTTTTTTTG
TTAAATACTTAACTACTCCCTTCACCCATAATATAAGATACTTTTACAAGCTATGGTAGTTTGCAAGAACGTCTTATATT
ACGAGACGGAAGGAGTAGCGCATTGGTGTTAAGAGACTGCCCTTGTTTCATTTGTCGGCAAAAAGATGGTTCATTGTGCA
CACATGCATGCACCCAATCCATGCATGC-TGCAGTCG---TAGCAAAATCCACCACAAGGAGTGCATATGTGCAACCGC-
----CAACCCACGT-CCAC-------GTACGTACGCATGCAGTTTGCTTTGTAAATCGACCAGTACGTACTAGCTACGTA
CTCCATTACCGGGATCGACTTTTACTTGTTA---ATCTTGTCAGCAGCAGCCGAGGGCCGGCGACCCTATCCTGTCGATC
GGGCGCCACCTCGGATCGAGGTTGCCGGCCGGCCAGCCGTGTTACCGCACGCCGGAGCCGGCGGATTGGT-TGAACCCCA
TGGAAAGGGCAC-GGAACAACGCAGAAACGACGTGGCTACAAACCGATTTGAT-ATGCTCTATCTTGCCTGTGCACGTCG
------CTCTAGTGCACCGGTTCCGCGCGGGCCAGGCTTTTCGACCAGCGCGACGCCTATATAAACCAGCCACACCTGCA
GCTCAAAATGGCAGCCGCAAGCATCGAGGCGTTGC----ATAGGTAC----------------------AG-GTT----G
CTAGCTAAGCTTGCATGCGCATGGCCAAGGCTCGCGTACTCCGCTGTGCGG--------TGCTGATGGTGTGCGCGCTCC
TAGTTCTCTCGTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------CGAGGCGGCTGGCCGGCAAAGGGGTCATGG
GAGAGAGGCCACGGCGGCGCCGGCAGCGATGGCAATGGCGAGAGGGCGTTTTGTCACGAAGGTGCTGCGGGAGGAGATGG
TTCAGGCGAATGGCCAGGGTGGCATTGGCGAGTCTAAGAGGACCAGTCCGGGCGGCCCAGACCCGCAGCATCATTAGTT-
--GATGTTGGTTCACCACCTGTCACGTTGCGTGCGTTGAGCTTTCATGCAATAAATCA-CGTTCTTGTCTTGGTAGCAAA
AGAGATTTTTTTTTTCACAAGCATATGTATACAGTGGACGTCGTCG---AGTACTTGTTACTACTAGTGTACTGCTACGT
TACCACAGAAGTAGCATGGGCGTGTTTGGTTGCCCGCATCGGGCCCAACCAGCCCCGCGCGGGAAAAAAGAAGCATGTTT
GGTTGCCCGTTTTCACTGTTGGGCCTGCATCGCACGCTTCTTAAAGCACCTCTGG-GCCTGACTCACTGGAAACGCACGA
ATCGGCAGTTTCTCCAGAGCCAGGCCCGAGCGGTGCACGTGGGCGGCGGCGGCTGCACGCACGCGGCCACGCTCGAGAAG
CCGCGTTGCTTCCCGAAGCGCCGGCAGTTATTAGCCTCACCGCCCCTCGCCGCTCCCTCTCCCCACTCTTCCCTACTCTC
CCAACTCTCACCGGCGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCAT-----------------------
---------CAATGGCGGTAAGCACTTCTCTCTCTTCGACATGCACGCTAGA------TTCGATCCACGGCGATAGATTC
GATCCACGGCGGAGGGGAATGGAGAATAGAGGTAGATAAGCATAGCGGTAGTTCATACTAGTTCATAGCAGTTCATAC--
--AAGTTCATACATGCAAGATCGAAATGCAGAAGGGGGATTGCGGGATT----------------GGGGGATAGG-----
---GGG--------TCGACAACGGACACCGGCTGAACGCGGCGGCCGTCACCGGCGTGCAGAGCGCCTGGTCGAGCCGCT
GGCCTTCATCTTCTTCTTCATCGCCATGCGGGCCGGTGGGTCGTCGTCGTCGTCCTCGGCGGAGTCGAGGTCGATCTGCC
AGGTACG-CGGCCTGGCTCTGGCGCCCTCTCAACTAGCGAGGTGGGACTAAACTCCCACCACCACGCCGCTGTGCGCGGC
CTTTGGTACNNNNNNNNNNAGGAAAAAGAATCACTCCAAA
>chr1B_414
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AGTAGCTCATTAGTGTAAGAGGCG-GCCCTCGCTAAATTTGTCGGCAAAAAGATGGCTCATT---CA
CACATGCATGTACCCAATCCATGCATGC-TGCAGTCG---TAGCAAAATCCACCACAAGGAGTGCATATGTGCAGGTGCA
AGCGCAACCCACC--------------TACGTCCGCATGCAGTATGCTTTGTATATCGACCAGTACGTACTAGCTACGTA
CTCCATTACCGGGATCGACTTTTACTTGTTAATAATCTTGTCAGCAGCAGCCGAGGGCCGGCGACCCTATCCTG----CC
GGGCGTCACCTCGGATCGAATTTGCCGGCCGGA---------------------G--CCGGCGGATTGGTTTGAACCCCG
TGGAAAGTGCAC-GGAGCAGTGCAGAAACCACGGAGCTAAAAACCGATTTGAT-ATGCTCTATCTT--------------
-----------------------------------------CGAGCAACGCGACGCCTATATAAACCAGCCCACCCTGCA
GCCCAAAATGGCATCTAGGTG------------------------------------TTGCAGGTACATAG-GTT----G
CTAGCTAAGCTTGCATGCGCATGGCCAAGACTCGCGTGCTCCGCTGTGCGG--------TGCTGGTGGTGTGCGTCCTCC
TGGTTCTCTCGTCC------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------GCATCTGCCGCGGCCGAGGCAGCTGGTCGGCAAAGGGGTCATGG
GAGAGAGGCCAC---GGCGCCGGCGGCGATGGCAATGGCGACAGGGCGTTTCGTCAGGAAGGTGCTGCGGGAGGAGATGG
TTCAGGCAGACGGCCATGGCGACATTGGCCAGTCCAAGAGGACCAGCCCCGGCGGCCCAGACCCGCAGCATCATTAGTT-
--GATGTCGGTTCAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr1A_446
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------TTTAATTTGTCGTTAAAAAGTCAGTTCATTGTGCA
CACGTGCGTGCACCCAATCCATGCATGCATGCCGCAGGCCTAGCAAAATCCACCACAAGGAGTGCATATGTGCAG-----
--------------CCCAC-------GTACGTACGCATGCAGTATGCTTTGTACATCGACCAGTACGTAGTAGCTACGTA
CTCCATTACCGGGATCGACTTTTACTTGTTAATC-T--TGCCAGCAGCAACCGAGTCCCGGCGACCCTATCCTG----CC
GGGCGCCAACTCGGATCGAGTTTGCCGGCCGGCCAGCCGTGTTATCGCACGCCGGAACCGGCCGATTGGT-TGAACCACG
TGGAAAGGGCAC-GGAACAACGCAGAAACGACATAGCTACAAACCGATTTGAT-ATGCTCTATCTTGCCTGTGCACGTCG
------CTCTAGTGCAC-----------------------------AGCGCGACGCCTATATAAACCAGCCACACCTGCA
GCTCAAAATGGCAGCCGCAAGCATCGAGGCGTTGCTTGCATAGGTAC----------------------AG-GTT----G
CTAGCTAAGCTTGCATGCGCATGGCCAAGGCTCGCGTGCTCCGCTGTGCGG--------TGCTGGTGGTGTGCGCGCTCC
TACTTCTCTCGTCC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------GCATCTGCGGCGGCCGAGGCGGCTGGCCGGCAAAGGGGTCATGG
GAGAGAGGCCAC---GGCGCCGGCAGCGATGGCAACGGCGAAAGGGCGTTTTGTCAGGATGGTGCTGCGGGAGGAGATGC
TTCAGGCGAACGGCCAGGGTGGCATTGGCGAGTCTAAGAGGACCAGTCCGGGCGGCCCAGACCCGCAGCATCATTAGTT-
--GATGTTGGTTCACCGCCTGTCACGTTGCGTGCATTGAGCTTTCATGCAATAAATTGCC-TTCTTGTCTTGGTAGCAAA
AGAGATTTTTTTTTTCACAAGCATATGTCTACAGTGCACGTCGTCGTCGAGTACTTGTTACTACTAGTGTACTGCTACGT
TACCACAGAAGTAGCATGTGTGTG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1D_500
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CATGCATGCATGCAATCG---TAGCAAAATCCACCACGGGGAGTGCGT-------------
---GCAACCCACCACCCAC-------GTACGTAT--ATGCAGTATGCTTTATATTTCGACCACTACGTACTAGGTACGTA
CTCCATTACCGGGATCGACTTTTACTTGTTAATC-TCTTGTCACCACCGGCCGGGCCCGCCCAACCCTGTCCTA----TC
GGGCGCCACTTCGGAGTTGTCG-GCCGGCCGGCCAGCCGTGTTATCTGACGCCGG--CCGGCGGATTGGT-GGAACCCCG
TGGAAAGTGCACCGAAACAACGCAGAAACGAC-----TACCAACCGATCTGAT-TTGCTCGATGTCTCGTGTGCACGTAC
GTC--TCTCTAGTGCTACACCAGTTTCGCGC---------------------ACGCCTATATAAACAAGCCACCACCC--
GCTCA------CATCCGCATGCACTCAGGCGTTCACCGAGCAGATATCACTCTAGCATTGCAGGCACAAGTAGTT----C
CTGGCTACGTTTGCATGCGCATGGCCAAGGCTTGCGTGCTCCGTGGTGCGG--------TGCTGGTGGTGTGCGCGCTCC
TAGTTCTCTCGTCC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GCATCTGCGTCGGCCGAGGCGGCTGGCCGGCAAAGCGGTCATGG
GAGAGAGGCCAC---GGCGCCCGGAGCGATGGCAATGGCGAGAGGGCCTTTCGTAAGGAAGCTGCTGCGGGAGGAGATGG
TTAAGGCGGACGGCCAGGGCGACATTGGCCAGTCTAAGAGGACCAGCCCCGGCGGCCCAGATCCGCAGCATCATTAGATC
ACGATGTCGGTTCACGTCCGGCCTCATTGCGTGCATGCAGTTTTGATGAAACAAATCA-C-TTCTTGTCTTGG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1A_500
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CATGCATGCATGCAGTCG---TAGCAAAATCCATCACGAGGAGTGCATACGTGCAA-----
--------------CCCACCACTCACGTACGTAT--ATGCAGTATGCTTTGTATTTGGACCAGTACGTACTAGCTACGTA
CTCCATTACCGGGACGGACTTATACTTGTTAATC-TCTTGTCACCACCACCCGGGCCCGCCCAACCCTGTCCTA----TC
GGGCGCCACCTCGGAGTTGTC-----GGCCGGCCAGCCGTGTTATCTGACGCCGG--CCGGCGGATTGGT-GGAACCCCG
TGGAAAGTGCACCGAAACAACGCAGAAACAAC-----TACGAACCGATTTTATATTGCTCCATGCCTCGTGTGCACGTAC
GACGTTCTCTAGTGCTCCACCAGCTTCGCGC---------------------ACGCCTATATAAACGAGCGACCACCC--
GCTCAAAATGGCATCCGCATGCACTCGGGCGTTCACCGAGCAGATATCACTCTAGCCTTGCAGGCACAACTAGTTCCTAG
CTAGCTAAGCTTCCATGCGCATGGCCAAGGCCTGCGTGCTCCGTGGTGCGGACGTGCGGTGCTTGTGGTCTGCGCGCTCC
TAGTTCTCTCGCAGGGGCGGACGCACGTTAGGCTACCCGGTTGAAATTTGTGCATACGTATATATAGGTAAGATATATTG
GGCTTGGACACCGGTAGAATCTTGAGCTGGACACCGGACGTCAAGCACGGGCCATCTAGCGATAGCAGCCCATCCAGCTG
CTTTGGACTGATTGTATCATTGGGAATTTGGAACGGGCACTCAGCCTGCTTAGCTATCGATCGATTGGATCGATCTCTGT
CGTACATGCGTCTGTTCGGCTGTTCTTTCCCCCACAGCGATACGGTGTGAGCGCGTTCGCCGTTGCCTGCTCAAGGGCTC
CGGAAGTCAGAGCCTGCCGCCAGTGCCCAGACGCTAGCCGCCGGATGCCCGCTCCGGGCCCTGATCCATTGCATACTACA
AATAATCGAAGGAAATAGGTACGGCCGTCAGTCTCACTTTAAACACGTACTCTCTTCGTCCCAAAAATTTTGTCTTAAAT
TTATCTAGATACGGATGTATCTAATACTAAAACGTGACTTGATACATCCATATTTAGACAAATCTAAAATAAAAAATTTG
GGACGGAGGGAGTACTTGTCATAGTTTTGTCTAGTTTTTTAGGTCTAAATTGAATTGAATGGCTAGGGTTTTAAAATCAA
GGTATTGCAAATGGGGAATTGGATTGCTTTGATTGGATAACTTTTCCTACTGGTTCACATCTCTTTGGATAATTTATAGA
CTGCGCGACGACAATACAACACAATGTCGAGTATGTATTTTTTGCGGAGTTTAACTTTGTAGCCATACAGTTTGATCGAT
ATGCTTTACTTATTATTTTTATTCCCGCTTCTTTAAACGCAAATAATGTAACTCGTGCACTTGTGATAACATAATTACCG
GTGAATACCAGGTGAGTTTATTGAAAGGTTTTTTAGAAAGATGAAGACATCGGCAGAAGATGATAATGCCAAAATGAACC
AGATGATGCTCCATCTCAGAAACAATAATGCCTTGATACATGACCAAGATTTAGCAACCATTAATTACAGGGAGTTCATC
TCAAACTCTAGAAGAAATCATTTTTGGTAAGAATTTTTACTGTCGAATATTTTAAATTGTTGGGTGTATTATTTTCATGT
ATATTATTGCTTGTCATCATCCTTGTATAGTGTATACATTTTTTTTGAGACATTGTATAGTGTATACGTGGACACCGGGA
CATTTTTGTTCTGGGTCCGCCCCTGTTCTCTCGTCTGCATCTGCGGCGGCCGAGGCGGCTGGCCGGCAAAGGGGTCACGG
GAGAGAGGCCAC---GGCGCCCGCAGCGATGGCAATGGCGAGTGGGCCTTTCGTCAGGAAGGTGCTGCGGGAGGAGATGG
CTAAGGCGGACGGCCAGGGTGACATTGGCCAGTCTAAGAGGACCAGCCCCGGCGGCCCAGATCCGCAGCATCATTAGATC
ACGATGTCGGTTCACGTCCGGCCTCATTGCGTGCATGCAGTTTTGATGAAACAAATCA-C-TTCTTGTCCTGG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr1D_1423
--------------------------------------------------------------------------------
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--------------CATGGGCGTGTTTGGTTGCCCGCATGCAGCCCAACCAGGCCCGCGCGGGATGTGCGCGGCCTGTTT
GGTAGCCCGCATACACTATTGGGCCTGCATCGCACGCTTCTTAAAGCACCTCAGG-GCCTGGCTCACTGGGAACGCACGA
ATCGGCAGTTTCTCCAGGGCCAGGCCCGAGCGGTGCACGTGGGCGGGTGCGGCTGCACGCGCGCGGCCACCCTCGAGAAG
CCGCGTTGCTTCCCGAAGCACCGGCAGTTATTAGCCTCACCGCCCCTCACCTCTCCCTCTCCCCACTCTTCCCCACTCTC
CCAACTCTCACCGGCGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCAT-----------------------
---------CAATGGCGGTAAGCACTTCTCTCTCTTCGACATGCACGCTAGA------TTCGATCCACGGTGATAGATTC
GATCCACGGCGGAGGGGAATGGGGAATAGAGGTAGATAAGCATAGGGGTAGTTCATACTAGTTCATAGCAGTTCATAC--
--GAGTTCATACATGCAAGATCGGAATGCATAAGGTAGATTTCGGGATT-GGGGATAGGGGAATAGGGGGAAAGG-----
---GGG--------TACACAACGGACACCGGCTGACCGCGGTGGCCGTCACCAGCGTGCGGAGCGGCTGGTCGAGCCGCT
GGCCTTCATCTTCTTCTTCATCGCCGTGCGGGCCGGCGGGTCGTCCTCGTCGTCCTCGGCGGAGTCGAGGTCGATCTGCC
AGGTAGGACGGACTGGCTCTGGCGCCCT----------------------------------------------------
----------------------------------------
>chr2D_1424
--------------------------------------------------------------------------------
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---------------ATGGGCCTGTTTGGTTGCCCGCATGAGGTCCAACCTGGCCCGCGCGGGAAGGATTCGGCCTGTTT
GGTAGCCCGCATACACTATTGGGCCTACATCGCACGCTTCTTAAAGCACCTCAGG-GCCTGGCTCACTGGGAACGCACGA
ATCGGCAGTTTCTCCAGGGCCAAGCCCAAGCGGTGCACGTGGGCGGGCGCAGCTGCACGCGCGCGGCCACACGCAAGAAT
CCGCGTTGCTTCCCGAAGCACCGGCAGTTATTAGCCTCACCGCCCCTCACCGCTCCCTCT-CCCACTCTTCCCCACTCTC
CCAACTCTCACCGGCGGTGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTTCAT-----------------------
---------CAATGGTGGTAAGCACTTCTCTCTCTTCGACATGAATGCTAGA------TTCGATCCACGGCGATAGATTC
GATCCACAGCGGAGGAGAATGGGGAATAGAGGTAGCTAAGCATAGGGCTAATTCATACTAGTGCATAGCAGTTCATAC--
--GAGTTCATACATGCAAGATCGG-----------TAGATTTTGGGATTGGGGGATAGGGTAATAGGGGGAAAGG-----
---GGG--------TACAGAACGGACACCGGCTGACCGCGGCGGCCGTCGACAGCGTGCGGAGCGGCTGGTCGAGCCGCT
GGCCTTCATCTTCTTCTTCATCGCCGTGCGGGCCGGCGGGTCGTCCTCG---------GCGGAGTCGAGGTCGATCTTCC
AGGAAGGACGGACTGGCTCTGGCGCC------------------------------------------------------
----------------------------------------
>chr1D_1426
--------------------------------------------------------------------------------
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-----------------GGGCGTGTTTGGTTGCCTGCATAGGCCTCGACCAGGCCCGCGCGGGAAGTGATCAGCCTGTTT
GGTAACCCGCATACACTATTGGGCCTGCATCACACGCTTCTTAAAGCATCTCTGG-GCATGACTCACTGGAAACGCACGA
ATCGGCAGTTTCTCCAGGTCCAGGCCCGAGCGGTGCACGTGGGCGGCAGCGGCTGCACGCGCGCGGCCACGCTCGAGAAG
CCGCGTTGCTTCGCGAAGCGCCGGCAGTTATTAGCCTCACTGCCCCTCACCGCTCCCTCTCCCCACTCTTCCCCACTCTC
CCAACTCTCACCGGCGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCAT-----------------------
---------CAATGGCGGTAAGCACTTCTCTCTCTTGGACATGCACGCTAGA------TTCGATCCACGGCGATAGATTT
GATCCACGGCTGAGGGGAATGGGGAATAT--GTAGACAAGCATAGGGGTAGTTCATACTAGTTCATAGCAGTTCATA---
-----------CATGCAAGATCGGAATGCAGAAGGGGGATTG------------------------GGGGATTGGGGGAT
AGGGGG--------TGCACAACAGACACCGGCTGACCGCGGCAGCCGTCACCGGCGTGCGGAACGGCTGGTCGAGCCGCT
GGCCTTCATCTTCTTCTTCATCGCCATGCGGGCCGGCGGGTCGTCGTCGTCGTCCTCGGCGGAGTCGAGGTCGATATGCC
AGGAACGACGGCCTGGCTCCGGCGCCCTC---------------------------------------------------
----------------------------------------
>chr1D_1426
--------------------------------------------------------------------------------
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-----------------GGGTGTGTTTGGTTGCATGCATAAGGCTCAACCAGGCCCGCGCGGGAAGGGAACGGGCTGTTT
GGACGCCTGGTTTTACTATTGGGCCTGCACAGCACGATACTTAAAACACCTCTGG-GCCCGGCTGACTCGGAACGCACGA
ATCGACAGTTTCCCCAGGGCCAGGCCCGAGCGGTGCACGTGGGCGGCGGCGGCTGCACGCGCGCGGCCACGCTCGAGATG
CCGCGTTGCTTCCCGAAGCGCCGGCAGTTATTAGCCTCACCGCCCCTCACCGCTCCCTCTCCCCACTCTTCCCCACTCTC
CCAACTCTCACCGGCGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCAGCACCAGCGAGCGGATCAGCAGTT
GGCCGGCGGCAATGGCGGTAAGCACTTCTCTCTCTTCGACATGCAAAACTTTATCCCGTTCGATC--CGGCGATAGATTC
GATCCACGGCGGAGGGGAATGGGGAATAGAGGTAGATAAGCACAGGGGTAGTTCATACTAGTTCATAGCAGTTCATAC--
--GAGTTCATAGATGCAAGATCGGAATGCAGAAGGGGGATTG------------------------GGGGATAGG-----
---GGGATAGGGGCTACACAACGGACACCGGCTGACCACGGCGGCCGTCACCGGCGTGCGGAGCGGCTAGTCGAGCCGCT
GGCCTTCATCTTCTTCTTCATCGCCGTGCGGGCCGGCGGGTCGTCATTGTCGTCCTAGGTGGAGTCGAGGTCGATCTGCC
AGGTACGACGGCCTGGCTCCGGCGCCCTC---------------------------------------------------
----------------------------------------
>chr7A_1426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GGGCGTGTTTGGTTGCC-GCATGCAGCCCAACCAGGCCCGCGTGGGATGTGCGCGGCCTGTTT
GGTAGCCTGCATACACTATTGGGCCTGCATCAGACACTTCTTAAAGCACCTCAGG-GCCTGGCTCATTGGGAACGCACGA
AACAACAGTTTCTCTAGGGCCAGGCCCGAGCGGTGCACATGGGTGGGCGCGGCTGCACGTGTGCAGCCACCCTCGAGAAG
CCGCATTGCTTCCTGAAGCACTGACAGTTATTAGCCTCACCGCCCCTCACCGCTCCCTCTCCCCACTCTTCCCCGCTCTC
CCAACTCTCACCGGTGGCGGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCAT-----------------------
---------CAATGGAGGTAAGCACTTCTCTTTCTTCGACATGCACGCTAGA------TTCGATCCACGGTGATATATTC
GATCCACGGCGGAGGGGAATGGGGAATAGAGGTAGATAAGCATAGGGGTAGTTCATACTAGTTCATAGCAGTTCATAC--
--GAGTTCATACATGCAAGATCGGAATGCATAAGGTAGATTTTGGGATTGGGGGATAGGGGAATAGGGGGAAAGG-----
---GGG--------TACACAATGGACACCGGCTGACCGCGGCGGCCGTCACCGGCGTGCGGAGCGGCTGGTCGACCCGCT
GGCCTTCATCTTCTTCTTCATCGCCGTGCGGGCTGGCGGGTCGTCCTCGTCGTCCTCGGCGGAGTCGAGGTCGATCTGCC
AGGTAGGACGGATTGGCTCCGGCGCCCT----------------------------------------------------
----------------------------------------
>chr7A_1426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------GGGCGTGTTTGGTTGCCCGCATCGAGCCCAACCAAGCCCGTGCAGGATGAGTGTGGGCTGTTT
GGTTGCTTAGTTTTACTATTGGGCCTGCATAGCACGATGTTTAAAGCAGCTCT-G-GCCTGCCTCGCTGGAAACGCACGA
ATCGGCAGTTTCTCCAGGGACAGACCCGAGCGGTGCACGTGGGCGGGCGTGGCTGCACGCGCGCGGCCACCCTCGAGAAG
TCGCATTGCTTCCCGAAGCACCGACAATTATTAGCCTCACCGCCCCTCATCGCTCCCTCTCCCCACTCTTCCCCACTCTC
CCAACTCTCACCGGAGGCAGTGGATCGGAGCAGAGGAAGAATACCACCGGACTCCAT-----------------------
---------CAATGGTGGTAAGCACTTCTCTCTCTTCGACATGCACGCTAGA------TTTGATCCACGGCGATAGATTC
GATTCACGGCGGAGGGGAATGGGGAATAGAGGTAGATAAGCATAGGGGTAGTTCATACTAGTTCTTAGCAGTTCATAT--
--GAGTTCATACATGCAAGATCGGAATTCATAAGGTAGATTTCGGGATTGGGGGATAGGGGAATAGGGGGAAAGG-----
---GGG--------TACACAACGGACACCGGTTGACCGC----------------------AGCGGCTGGTCGAGCCGCT
GGCCTTCTTCTTCTTCTTCATCACCGTGCGGGCTGGCGGGTCGTCCTCGTCGTCCTCGGCGGAGTCGAGGTCGATCTGCC
AGGTAGGACAGACTAGCTCCGACGCCCT----------------------------------------------------
----------------------------------------
>chr2D_1426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------GGGCGTGTTTGGTTGCCTGCATAGGCCTCGACCAGGCCCGCACGGGAAGTGATCTGCCTATTT
GGTAGCCCGCATACACTATTGGGCCTGCATCGCACGCTTCTTAAAGCACCTCTGG-GCCTGGCTCACTTGAAACGCACGA
ATCGGCAGTTTCTTTAGGGCTAGGCCCGAGCAGTGCACGTGGGCGGCGGGGGCTGCACGCGCGCGGCCACGCTCGAGAAG
CCGCGTTGCTTCCTGAAGCGCCGGCAGTTATTAGCCTTACCGCCCCTCGCAGCTCCCTCTCCCCACTCTTCCCCACTCTC
CCAACTCTCACCGACGGCAGCGGATCGGAGCAGAGGAAGAAGACCACCGGACTCCAT-----------------------
---------CAATGGCGGTAAGCACTTCTGTCACTTCGACATGCACGCT-------------------------AGATTC
GATCCACGACGGAGGGGAATGGGGAATAT--GTAGATAAGCATAGGGGTAGTTCATACTAGTTCATAGCAGTTCATAC--
--GAGTTCATACATGCAAGATCGGAATGCAGAAGGGGGATTA------------------------GGGGATAGG-----
---GGG--------TGGACAACGGACACCGGCTGACCGCGGCAGCCGTCACCAGCGTGCGGAGCGGCTGGTCGAGCCGCT
GGCCTTCATCTTCATCGTC------GTGCGGGCCGGCAGGTCGTCATCGTCGTCCTCGGTGGAGTCAAGGTTGATCTGCC
AGGAACGACGGCCTGGATCTGGCGGCCTC---------------------------------------------------
----------------------------------------
>chr7B_1426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------GGACGTGTTTGGTTGCCTGTGTGAGGTCCAACCAGGCCCGCGCGGGAAGGATTCGGCCTGTTT
GATAGCCCGCATACACTATTGGGCCTGCATCGCACGCTTCTTAAAGCACCTCAGG-GCCTGGCTCACTGGAAACGCACGA
ATCGGCAGTTTCTCCAGGGCCAGGCCCGAGCGGTGCACGTGGACGGGGGCGGCTGCACGCGCGCGACCACGCTCGAGAAG
CCGCGTTGCTTCCCGAAGCACCGACAGTTATTAGCCTCACCGCCCCTCACCGCTCCCTCTCCCCACTCTTCCCCACTCTC
CCAACTCTCACCGGCGGCGGCGGATCGGAGTAGAGGAAGAAGACCACCGGACTCCC------------------------
---------CAATGGTGGTAAGCACTTCTCTCTCTTCCACATGAACGCT-------------------------AGATTC
GATCCACGGCGGACGGGAATGGGGAATGGAGGTAGCTAAACATAGGGGTAAATCATACTAGTTCATAGCAGTTCATACAT
AGAAGTTCATACATGCAAGATCGG-----------TAGATTTAGGGATTGGGGGATAGGGCAATAGGGGGAAAGG-----
---GGG--------TACAGAACGGACACCGACTGACCGCGGCGGCCGACGCCGGCGTGTAGAGCAGCTGGTCGAGCGGCT
GGCCTTCATCTTCTTCTTCATCGCCGTGCGGGCCGGCGGATCGTCCTAGTCGTCCTCGGCGGAGTCGAGGTCGATCTGCC
AGGTAGGACGGACTGGCTCCAGCGCCCT----------------------------------------------------
----------------------------------------
>chr4A_1426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------GGGCGTGTTTGGTTGCCCGCATCGAGCCCAACCAGGCCCGCGCAGGATGAGTGTGGGCTATTT
GGTTGCCTAGTTTTACTATTGGGCCTGCATAGCATGATGTTTAAAGCAGCTCT-AGGCCTGCCTCGCTGGAAATGCACGA
ATCAACAGTTCCTCCAGGGCCAGGCCCGAGCGGTGCATGTGGGCGCGTGCGGCTGCACGCGCGCGACCACCCTCGAGAAG
CCGTGTTGCTT-CCGAAGCACCGACAGTTATTAGCCTCGCCGCCCCTCACCGCTCCCTCTCCCCACTCTTCCCCATTCTC
TCAACTCTCACCGGCGGCGGTGGGTCGGAGCAGAGGAAGAAGACGACCAGACGCCAT-----------------------
---------CAATGGCGGTAAGCACTTCTCTCTCTTCGACACGCACGCTAGA------TTCAATCCGTGGCGATAGATTC
GATCCACGACGGAGGGGAATGGGGAATAGAGGTAGATAAGCATAGGGGTAGTTCATACTAGTTCATAGCAGTTCATAC--
--GAGTTCATACATGCAAGATCGGAATGCATAAGGTAGATTTCGGGATTGGAGGATAGGGG-------------------
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>chr4B_1484
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---------------------------------------------------------------------------TGTTT
GGTAGCCCGCATACACTATTGGGCCTGCATCGCACGCTTCTTAAAGCATCTCT-GGGCCTGGCTCACTGGGAACGCGCGG
ATCGGCAGTTTCTTCAGGGCCAGGCCCGAGCGGTGCACGTGGGCGGGCGTGGCTGCACGCGCGCGGCCACACTCGAGAAG
CCGCGTTGCTTCCCGAAGCACCGGCAGTTATTAGCCTCACCGCCCCTCACCGCTCCCTCTCCCCACTCTTTCTCACTCTC
CCAACTCTCATCGGCGGCGGCGGAACGGAGCTGAGGAATCAGACCACCGGACTCCAT-----------------------
---------CAATGGCGGTAAGCACTTCTCTTTCTTCGACATGCACGCTTGA------TTCGATCGACGGAGATAGATTC
GATCCACGGCGGACGGGAATGGGGAATAGAGGTAGATAAGCATAGGGGTAATTCATACTAGTTCATAGCAGTCCATAC--
--GAGTTCATACATGCAAGATCGGAATGCATAAGGTAGATTTCGGGATTGGGGGATAGGGGAATAGGGGGAAAGG-----
---GGG--------TACACAACGGACACCGGCTGACCGCGGCGGCCGTCACCGGCGTGCGGAGCGGCTGGTCGAGCCGTT
GGTCTTCATCTTCTTCTTCATCGCCGTGCGGGCCGGCGGGTCGTCCTCATCGTACTCGGCGGAGTCGAGGTCGATCTGCC
AGGTAGGATGGGCTGGCTCCGGCGCCCT----------------------------------------------------
----------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS------S----S----S-SSS-SSS-----S----S-------------------------------
---------------------------------------------------------------------------SS---
------------SS-----------------------------S---------S--------------------------
--------------------------------------------------------------------------SSSS--
--------------------S-----------------------S-----------S----------------------S
----------------------------------S---------------------------------------------
------------------SSSSS-SSSSS-SSSSSSSSSSS---S-----------------------------------
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-------------------------------------S--------------------------S---------------
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------------SSS-----------------------------------------S-----------------------
----------S---------------------------------------------------------------------
----------------S-----------------S-------------------------S-------------------
----------------------------S-------S-------------------------------------------
----------------------------------------------------S------------S----S---S-----
---------S-------S--------------------------------------------------------------
-----------------S------------------------------------------S-------------------
-------------------------------------------------------------------------S------
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----------------------S----------------------S----------------------------------
-----------------------S--------------------------------------------------------
---------------S-------------------S-----------------------------S--------------
------------------------------------S-------------------------------------------
-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_835
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---------------AACAACGCAGAAACGACGTG---------------------------------------------
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>reverse_3557
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------------------------------------GCGAGGTGGGACTAAACTCC------------------------
----------------------------------------
