>input_sequence_85830
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----------------------------------------ATGAAGAAGATCTTGTTCAGGATGTTCTATTCGATACTAG
TAGGAGAAGAACCCGACTCGGTATTCTTAAAAAAAGAGGGGAAGCAGAACCAAGTCAAGATGATATGGGTCGCCCCTTCT
TCTTGCGCCAAAGATCTTACCATTTCCGAAGGAACTGGGGCTACATTTCTTTTCAATTTCCATTCAAGAGTTTCTATCTG
TTTCCACGCCCTTTTCTTGAGAGCTCGAAACATGAGGACAAATTACTTCTCTTAG-------------------------
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------------
>chr3B_1_TraesCS3B01G188100
GAGTTAGCCGATGCTTATTCCTCAGATACCGTCATTGTTTCTTCTCCGAGAAAAGAAGTTGACGACCCATAGGCCTTCCA
CCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCTCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCC
GTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAAC
TAGCTAATCAGACGCGAGCCCCTCCTTGGGCGGATTTCTGCTTTTGCTCCTCAGCCTACGGGGTATTAGCAACCGTTTCC
AGTTGTTGTTCCCCTCCCAAGGGCAGGTTCTTACGTGTTACTCACCCATTCTCCACTGGAAACACCACTTCCCGTTCGAC
TTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAGCCATGATCGAACTCTCCATGAGATTCATAGTTGCATTACTTA
TATCTTCCTTATTCGTAGACAAAGCAGATTCGGAATTGTCTTTCCTTCCAAGGATAACTTGTATCCATGCGCTTCAGATT
ATTAGCCTGGAGTTCGCCACCAGCAGTATAGCCAACCCTACCCTATCACGTCAATCCCACAAGCCTCTTATCCATTCTCG
TTCGCTCGTGGCGGGGGAGTAAGTCAAAATAGAAAAAACTCACATTGGGTTTAGGGATAATCAGGCTCAAACTGATGACT
TCCACCACGTCAAGGTGACACTCTACCGCTGAGTTATATCCCTTCCCCATCCCATCGAGAAAGAGAATTAACGAATCCTA
AGGCAAAGGGGCGAGAAACTCAAGGCCACTCTTCCTCCGGGCTTTCTTTCCGCACTATTATCGATAGTCAAATAATGGGA
AAAATTGGATTCAATTGTCAACTGGTCCTATCGAAAGTAGGATTGACTATGGATTCGAGCCATCGCACATGGTTTCATAA
AATCTGTATGATTTTCCCGATCTAAATCGAGCAGGTTTCCATGAAGAAGATCTTGTTCAGGATGTTCTATTCGATACTAG
TAGGAGAAGAACCCGACTCGGTATTCTTAAAAAAAGAGGGGAAGCAGAACCAAGTCAAGATGATATGGGTCGCCCCTTCT
TCTTGCGCCAAAGATCTTACCATTTCCGAAGGAACTGGGGCTACATTTCTTTTCAATTTCCATTCAAGAGTTTCTATCTG
TTTCCACGCCCTTTTCTTGAGAGCTCGAAACATGAGGACAAATTACTTCTCTTAGGAACACATACAAGAAAAAGGATAAC
GGTAGCCCTCCCATTAACTACTTCATTTTCATTTATGAATTTCATAGTAATAGAAATCCATGTCCTACCGAGACAGAATT
TAGAACTTGCTATCCTCTTGCCTAATAGGCAAAGATTGACCTCTGTAGAAAGACTGATTCATTCGGATCGATATGAGGAC
CCAACTCCGTTGCATTGCCAGAATCCATGTTCCATATTTGAAGCGGGTTGACCTCTATGCTTCTCTCATGGTACAATCCT
CTTCCTGCTGAGCCCCCTTTCTCCTCGGCCCACAGAGAAAAAAATGTAGGACTGGTGCCGACAGTTCATCACGGAAGAAA
GAACTCACAGAGCCGGGATCGGTAACTAATAGTACTACTAACTAATACTAATATATAGAAATAGATATCTAGAAATAGAA
ATGAACTAATATATAGATAATCGAAATTGAAAAGAACTGTCTTTTCT-GTATACTTTCCCCGTTCTATTGCTACCGCGGG
TCTTATGCAATCGATCGGATCATATAGATATACCTTCAACACAACATAGGTCATCGAAAAGATCTCGGACGACTCACCAA
AGCACGAAAGCCAGTTAGAAAATGGATTCCTATTTGAAGAGTGCCTAACCGGATGG------------------------
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---------------------------------------------------ATAAGCTCACATTAACCCGTCAATTTTGG
ATCCAATTCGGGATTTTTCTTGGGAAGTTTCGGGAAGAAATTGGAATGGAATAATATAGATTCATACAGAGGAAAAGGTT
CTCTATTGATGCAAACGCTGTACCTAGAGGATAGGGATAGAGGAAGAGGGA-AAATCGAAATGAAATAAATAAAGAATAA
AGCCAAAAAAATAAGTCGAAGATAGAAGAGCCCAGATTCCAAATGAAGAAATGGAAACTCGAAAAGGATCCTTCTGATTC
TCAAAGAATGAGGGGCAAGGGGATTGATACCGAGAAAGATTTCTTCCTATTATAAGACGTGATTTGATCTGCATATGTTT
GGTAAAAGAACA
>chr6D_1
GAGTTAGCCGATGCTTATTCCTCAGATACCGTCATTGTTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTAGGCCTTCCA
CCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCGCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCC
GTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAAC
TAGCTAATCAGACGCGAGCCCCTCCTTGGGCGGATTTCTCCTTTTGCTCCTCAGCCTACGGGGTATTAGCAACCGTTTCC
AGTTGTTGTTCCCCTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCGTTCGCCACTGGAAACACCACTTCCCGTTCGAC
TTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAGCCAGGATCGAACTCTCCATGAGATTCATAGTTGCATTACTTA
TAGCTTCCTTATTCGTAGACAAAGCAGATTCGGAATTGTCTTTCCTTCGAAGGATAACTTGTATCCATGCGCTTCAGATT
ATTAGCCTGGAGTTCGCCACCAGCAGTATAGCCAACCCTACCCTATCACGTCAATCCCACAAGCCTCTTATCCATTCCCG
TTCGCTCGTGGCGGGGGAGTAAGTCAAAATAGAAAAAACTCACATTGGGTTTAGGGATAATCAGGCTCGAACTGATGACT
TCCACCACGTCAAGGTGACACTCTACCGCTGAGTTATATCCCTTCCCCGTCCCATCGAGAAAGAGAATTAACGAATCCTA
AGGCAAAGGGGCGAGAAACTCAAGGCCACTCTTCCTCCGGGCTTTCTTTCCGCACTATTATGGATAGTCAAATAATGGGA
AAAATTGGATTCAATTGTCAACTGGTCCTATCGAAAGTAGGATTGACTATGGATTCGAGCCATCGCACATGGTTTCATAA
AATCTGTACGATCTTCCCGATCTAAATCGAGCAGGTTTCCATGAAGAAGATCTTGTTCAGCATGTTCTATTCGATACTGG
TAGGAGAAGAACCCGACTCGGTATTCTTAAAAAAAGAGGGGAAGCAGAACCAAGTCAAGATGATATGGGTCGCCCCTTCT
TCTTGCGCCAAAGATCTTACCATTTCCGAAGGAACTGGGGCTACATTTCTTTTCAATTTCCATTCAAGAGTTTCTATCTG
TTTCCACGCCCTTTTCTTGAGACCTCGAAACATGAGGACAAATTACTTCTCTTAGGAACACATACAAGAAAAAGGATAAC
GGTAGCCCTCCCATTAACTACTTCATTTTCATTTATGAATTTCATAGTAATAGAAATCCATGTCCTACCGAGACAGAATT
TAGAACTTGCTATCCTCTTGCCTAATAGGCAAAGATTGACCTCTGTAGAAAGACTGATTCATTCGGATCGATATGAGGAC
CCAACTCCGTTGCATTGCCAGAATCCATGTTCCATATTTGAAGCGGGTTGACCTCTGTGCTTCTCTCATGGTACAATCCT
CTTCCTGCTGAGCCCCCTTTCTCCTCGGTCCACAGAGAAAAAAATGTCGGACTGGTGCCGACAGTTCATCACGGAAGAAA
GAACTCACAGAGCCGGGATCGGTAACTAATAGTACTACTAACTAATACTAATATATAGAAATAGATATCTAGAAATAGAA
ATGAACTAATATATAGATAATCGAAATTGAAAAGAACTGTCTTTTCT-GTATACTTTCCCCGTTCTATTGCTACCGCGGG
TCTTATGCAATCGATCGGATCATATAGATATCCCTTCAACACAACATAGGTCATCGAAAAGATCTCGGACGACTCACCAA
AGCACGAAAGCCAGTTAGAAAATGGATTCCTATTTGAAGAGTGCCTAACCGCATGGATAAGCTCACATTAAGCCGTCAAT
TTTGGATCCAATTCGGGATTTTTCTTGGGAAGTTTCGGGAAGAAATTGGAATGGAATAATATAGATTCATACAGAGGAAA
AGGTTCTCTATTGATGCAAACGCTGTACCTAGAGGATAGGGATAGAGGAAGAGGGAAAAATCGAAATGAAATAAATAAAG
AATAAAGCCAAAAAAATAAGTCGAAGATAGAAGAGCCCAGATTCCAAATGAAGAAATGGAAACTCGAAAAGGATCCTTCT
GATTCTCAAAGAATGAGGGGCAAGGGGATTGATACCGAGAAAGATTTCTTCTTATTATAAGACGTGATTTGATCTGCATA
TGTTTGGTAAAAGAACAATCTTCTCCTTTAATCATATCATAAATGGAAAGTGTTCAATTAGAACATGAAAACGTGACTCA
ATTGGTCTTAGTTAGTCTTCGGGACGGAGTGGAAGAAGGGCGGAGACTCTCGAACGAGGAAAAGGATCCCTTCGAAAGAA
TTGACCGAGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGATAGTAAGGGTGACTTATCTGTCGACTT
TTCCACTATCAACCCCAAAAAACCCAACTCTGCCTTACGTAAAGTTGCCAGAGTACGATTAACCTCTGGATTTGAAATCA
CTGCTTATATACCTGGTATTGGCCATAATTTACAAGAACATTCTGTAGTATTAGTAAGAGGAGGAAGGGTTAAGGATTTA
CCCGGTGTGAGATATCGCATTATTCGAGGAACCCTAGATGCTGTCGCAGTAAAGAATCATCAACAAGGGCGTTCTAGTGC
GTTGTAGATTCTTATCCAAGATTTGTATCATTTGATGATGCCATGTGAATCGCTAGAAACATGTGAAGTGTATGGCTAAC
CCAATAACGAAAGTTTCGTAAGGGGACTGGAGCAGGCTACCATGAGACAAAAGATCCTCTTTCTAAAGAGATTCGATTCG
GAACTCTTATATGTCCAAGGTCAATATGGAAATTCTTTCAGAGGTTTTCCCTTACTTTGTCCGTGTCAACAAACAATTCG
AAATACCTCGACTTTTTCAGAACAGGTCCGAGTCAAATAGCAATGATTCGAAGCACTTCTTTTTCCATTACACTATTTCG
GAAACCTAAGGACTCGATCGTATGGATATGGAAAATACAGGATTTCCGATCCTAGCGGGAAAAGGAGGGAAACGGATACT
CAATTTAAAGTGAGTAAACAGAATTCCATACTCGATCTCATAGATCCCTATAGAATTCTGTGGAAAGCCGTATTCGATGA
AAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTACAATATGGGGTCAAAAAGCCAAAAA
AATAAGTGATTTTAGCCCTTATAAAAAGAAAACGGATTCTTGAACCTCTTTCACGCTCATGTCTCGTCGAGGTACTGCAG
AAAAAAGAACTGCAAAATCCGATCCAATTTTTCGTAATCGATTAGTTAACATGGTGGTTAACCGTATTATGAAAGACGGA
AAAAAATCATTGGCTTATCAAATTCTCTATCGAGCCGTGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATTGGT
TTTACGTCAAGCAATACGTAGAGTAACTCCCAATATAGGAGTAAAAACAAGACGTAATAAAAAAGGATCGACGCGGAAAG
TTCCGATTGAAATAGGATCTAAACAAGGAAGAGCACTTGCCATTCGTTGGTTATTAGAAGCATCCCAAAAGCGTCCGGGT
CGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTAGATGCTGCCAAAGGGAGTGGGGGTGCCATACGCAAAAAGGAAGC
GACTCAGAGAATGGCAGAGGCAAATAGAGCTCTTGCACATTTTCGTTAATCCATGAACAGAATCTATGTATGTAGACACA
TGGATCCGTACATCTCGATCGGAAAAGAATCAATAGAAGGAGAATCGGACGATATCTTTCTCGAAACAAACAAAAAGGAA
AAGAAAGAGAAAACAGAAATCATGATCAACTAAGCCCTCTCGAGGGCTTGCTTAAGAATAAGAAAGAAGAATCTTATGGA
AATAGCATGGAATAAGGTTTGATCCTATTCATGGGGATTCCGTAAATATCCCATTTCAAAAATCAAAACAATCGGGACTT
TTCGGAGATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGA
CGGCGGACTTGAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGG
CTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCATTGTTTCTTCTCCGAGAAAAGAAGTTGACGACCCG
TAGGCCTTCCACCTCCACGCGGCATTGCTCCGTCAGGATTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG
GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT
ACCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTTGGGCGGATTTCTCCTTTTGCTCCTCAGCCTACGGGGTATTAG
CAACCGTTTCCAGTTGTTGTTCCCCTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCGTTCGCCACCGGAAATTCCCTC
TGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTGAAAA
GCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGGCACAGAGT
TAGCCGATGCTTATTCCTCAGATACCGTCATTGTTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTAGGCCTTCCACCTC
CACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT
CTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGC
TAATCAGTCGCGAGCCCCTCCTTGGGCGGATTTCTCCTTTTGCTCCTCAGCCTACGGGGTATTAGCAACCGTTTCCAGTT
GTTGTTCCCCTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCGTTCGCCACTGGAAACACCACTTCCCGTTCGACTTGC
ATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAGCCAGGATCGAACTCTCCATGAGATTCATAGTTGCATTACTTATAGC
TTCCTTATTCGTAGACAAAGCAGATTCGGAATTGTCTTTCCTTCCAAGGATAACTTGTATCCATGCGCTTCAGATTATTA
GCCTGGAGTTCGCCACCAGCAGTATAGCCAACCCTACCCTATCACGTCAATCCCACAAGCCTCTTATCCATTCCCGTTCG
CTCATGGCGGGGGAGTAAGTCAAAATAGAAAAAACTCACATTGGGTTTAGGGATAATCAGGCTCGAACTGAGGACTTCCA
CCACGTCAAGGTGACACTCTACCGCTGAGTTATATCCCTTCCCCGTCCCATCGAGAAAGAGAATTAACGAATCCTAAGGC
AAAGGGGCGAGAAACTCAAGGCCACTCTTCCTCCGGGCTTTCTTTCCGCACTATTATGGATAGTCAAATAATGGGAAAAA
TTGGATTCAATTGTCAACTCGTCCTATCAAAAGTAGGATTGACTATGGATTCGAGCCATCGCACATGGTTTCATAAAATC
TGTACGATTTTCCCGATCTAAATCGAGCAGGTTTCCATGAAGAAGATCTTGTTCAGCATGTTCTATTCGATACTGGTAGG
AGAAGAACCCGACTCGGTATTCTTAAAAAAAGAGGGGAAGCAGAACCAAGTCAAGATGATATGGGTCGCCCCTTCTTCTT
GCGCCAAAGATCTTACCATTTCCGAAGGAACTGGGGCTACATTTCTTTTCAATTTCCATTCAAGAGTTTCTATCTGTTTC
CACGCCCTTTTCTTGAGACCTCGAAACATGAGGACAAATTACTTCTCTTAGGAACACATACAAGAAAAAGGATAACGGTA
GCCCTCCCATTAACTACTTCATTTTCATTTATGAATTTCATAGTAATAGAAATCCATGTCCTACCGAGACAGAATTTAGA
ACTTGCTATCCTCTTGCCTAATAGGCTAAGATTGACCTCTGTAGAAAGACTGATTCATTCGGATCGATATGAGGACCCAA
CTCCGTTGCATTGCCAGAATCCATGTTCCATATTTGAAGCGGGTTGACCTCTGTGCTTCTCTCATGGTACAATCCTCTTC
CTGCTGAGCCCCCTTTCTCCTCGGTCCACAGAGAAAAAAATGTAGGACTGGTGCCGACAGTTCATCACGGAAGAAAGAAC
TCACAGAGCCGGGATCGGTAACTAATAGTACTACTAACTAATACTAATATATAGAAATAGATATCTAGAAATAGAAATGA
ACTAATATATAGATAATCGAAATTGAAAAGAACTGTCTTTTCTGTATACTTTCCCCGTTCTATTGCTACCGCGGGTCTTA
TGCAATCGATCGGATCATATAGATATCCCTTCAACACAACATAGGTCATCGAAAAGATCTCGGACGACTCTCCAAAGCAC
GAAAGCCAGTTAGAAAATGGATTCCTATTTGAAGAGTGCCTAACCGCATGGATAAGCTCACATTAACCCGTCAATTTTGG
ATCCAATTCGGGATTTTTCTTGGGAAGTTTCGGGAAGAAATTGGAATGGAATAATATAGATTCATACAGAGGAAAAGGTT
CTCTATTGATGCAAACGCTGTACCTAGAGGATAGGGATAGAGGAAGAGGGAAAAATCGAAATGAAATAAATAAAGAATAA
AGCCAAAAAAATAAGTCGAAGATAGAAGAGCCCAGATTCCAAATGAAGAAATGGAAACTCGAAAAGGATCCTTCTGATTC
TCAAAGAATGAGGGGCAAGGGGATTGATACCGAGAAAGATTTCTTCTTATTATAAGACGTGATTTGATCTGCATATGTTT
GGTAAAAGAACA
>chr3A_1
GAGTTAGTCGATGCTTATTCCTCAGATACCGTCATTGTTTCTTCTCCGAGAAAAGAAGTTGACGACCCATAGGCCTTCCA
CCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCC
GTGTCTCAGTCCCAGTGTGGCTGATCAACCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAAC
TAGCTAATCAGACGCGAGCCCCTCCTTGGGCAGATTTCTCCTTTTGCTCCTCAGCCTACGGGGTATTAGCAACCGTTTCC
AGTTGTTGTTCCCCTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCGTTCGCCACTGGAAACACCACTTCCCGTTCGAC
TTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAGCCAGGATCGAACTCTCCATGAGATTCATAGTTGCATTACTTA
TAGCTTCCTTATTCGTAGACAAAGCAGATTCGGAATTGTCTTTCCTTCCAAGGATAACTTGTATCCATGCGCTTCAGATT
ATTAGCCTGGAGTTCGCCACCAGCAGTATAGCCAACCCTACCCTATCACGTCAATCCCACAAGCCTCTTATCCATTCCCG
TTCGCTCGTGGCGGCGGAGTAAGTCAAAATAGAAAAAACTCACATTGGGTTTAGGGATAATCAGGCTCGAACTGATGACT
TCCACCACGTCAAGGTGACACTCTACCGCTGAGTTATATCCCTTCCCCGTCCCATCGAGAAAGAGAATTAACGAATCCTA
AGGCAAAGGGGCGAGAAACTCAAGGCCACTCTTCCTCCGGGCTTTCTTTCCGCACTATTATGGATAGTCAAATAATGGGA
AAAATTGGATTCAATTGTCAACTGGTCCTATCGAAAGTAGGATTGACTATGGATTCGAGCCATCGCACATGGTTTCATAA
AATGTGTACGATTTTCCCGATCTAAATCGAGCAGGTTTCCATGAAGAAGATCTTGTTCAGCATGTTCTATTCGATACTGG
TAGGAGAAGAACCCGACTCGGTATTCTTAAAAAAAGAGGGGAAGCAGAACCAAGTCAAGATGATATGGGTCGCCCCTTCT
TCTTGCGCCAAAGATCTTACCATTTCCGAAGGAACTGGGGCTACATTTCTTTTCAATTTCCATTCAAGAGTTTCTATCTG
TTTCCACGCCCTTTTCTTGAGACCTCGAAACATGAGGACAAATTACTTCTCTTAGGAACACATACAAGAAAAAGGATAAC
GGTAGCCCTCCCATTAACTACTTCATTTTCATTTATGAATTTCATAGTAATAGAAATCCATGTCCTACCGAGACAGAATT
TAGAACTTGCTATCCTCTTGCCTAATAGGCAAAGATTGACCTCTATAGAAAGACTGATTCATTCGGATCGATATGAGGAC
CCAACTCCGTTGCATTGCCAGAATCCATGTTCCATATTTGAAGCGGGTTGACCTCTGTGCTTCTCTCATGGTACAATCCT
CTTCCTGCTGAGCCCCCTTTCTCCTCGGTCCACAGAGAAAAAAATGTAGGACTGGTGCCGACAGTTCATCACGGAAGAAA
GAACTCACAGAGCCGGGATCGGTAACTAATAGTACTACTAACTAATACTAATATATAGAAATAGATATCTAGAAATAGAA
ATGAACTAATATATAGATAATCGAAATTGAAAAGAACTGTCTTTT-T-GTATACTTTCCCCATTCTATTGCTACCGCGGG
TCTTATGCAATCGATCGGATCATATAGATATCCCTTCAACACAACATAGGTCATCGAAAAGATCTTGGACGACTCACCAA
AGCACGAAAGCCAGTTAGAAAATGGATTCCTATTTGAAGAGTGCCTAACCGCATGG------------------------
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---------------------------------------------------ATAAGCTCACATTAACCCGTCAATTTTGG
ATCCAATTCGGGATTTTTCTTGGGAAGTTTCGGGAAGAAATTGGAATGGAATAATATAGATTCATACAGAGGAAAAGGTT
CTCTATTGATGCAAACGCTGTACCTAGAGGATAGGGATAGAGGAAGAGGGAAAAATCGAAATGAAATAAATAAAGAATAA
AGCCAAAAAAATAAGTCGAAGATAGAAGAGCCCAGATTCCAAATGAAGAAATGGAAACTCGAAAAGGATCCTTCTGATTC
TCAAAGAATGAGGGGCAAGGGGATTGATACCGAGAAAGATTTCTTCTTATTATAAGACGTGATTTGATCTGCATATGTTT
GGTAAAAGAACA
>chr3D_1
GAGTTAGCCGATGCTTATTCCTCAGATACCGTCATTGTTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTAGGCCTTCCA
CCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCGCCACTGCTGCCTCCCGTAGGAGTCTGGGCC
GTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAAC
TAGCTAATCAGACGCGAGCCCCTCCTTGGGCGGATTTCTCCTTTTGCTCCTCAGCCTACGGGGTATTAGCAACCGTTTCC
AGTTGTTGTTCCCCTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCCTTCGCCACTGGAAACACCACTTCCCGTTCGAC
TTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAGCCAGGATCGAACTCTCCATGAGATTCATAGTTGCATTACTTA
TAGCTTCCTTATTCGTAGACAAAGCAGATTCGGAATTGTCTTTCCTTCCAAGGATAACTTGTATCCATGCGCTTCAGATT
ATTAGCCTGGAGTTCGCCACCAGCAGTATAGCCAACCCTACCCTATCACGTCAATCCCACAAGCCTCTTATCCATTCCCG
TTCGCTCGTGGCGGGGGAGTAAGTCAAAATAGAAAAAACTCACATTGGGTTTAGGGATAATCAGGCTCGAACTGATGACT
TCCACCACGTCAAGGTGACACTCTACCGCTGAGTTATATCCCTTCCCCGTCCCATCGAGAAAGAGAATTAACGAATCCTA
AGGCAAAGGGGCGAGAAACTCAAGGCCACTCTTCCTCCGGGCTTTCTTTCCGCACTATGATGGATAGTCAAATAATGGGA
AAAATTGGATTCAATTGTCAACTGGTCCTATCGAAAGTAGGATTGACTATGGATTCGAGCCATCGCACATGGTTTCATAA
AATCTGTACGATTTTCCCGATCTAAATCGAGCAGGTTTCCATGAAGAAGATCTTGTTCAGCATGTTCTATTCGATACTGG
TAGGAGAAGAACCCGACTCGGTATTCTTAAAAAAAGAGGGGAAGCAGAACCAAGTCAAGATGATATGGGTCGCCCCTTCT
TCTTGCGCCAAAGATCTTACCATTTCCGAAGGAACTGGGGCTACATTTCTTTTCAATTTCCATTCAAGAGTTTCTATCTG
TTTCCACGCCCTTTTCTTGAGACCTCGAAACATGAGGACAAATTACTTCTCTTAGGAACACATACAAGAAAAAGGATAAC
GGTAGCCCTCCCATTAACTACTTCATTT-CATTTATGAATTTCATAGTAATAGAAATCCATGTCCTACCAAGACAGAATT
TAGAACTTGCTATCCTCTTGCCTAATAGGCAAAGATTGACCTCTGTAGAAAGACTGATTCATTCGGATCGATATGAGGAC
CCAACTCCGTTGCATTGCCAGAATCCATGTTCCATATTTGAAGCGGGTTGACCTCTGTGCTTCTCTCATGGTACAATCCT
CTTCCTGCTGAGCCCCCTTTCTCCTCGGTCCACAGAGAAAAAAATGTAGGACTGGTGCCGACAGTTCATCACGGAAGAAA
GAACTGACAGAGCCGGGATCGGTAACTAATAGTACTACTAACTAATACTAATATATAGAAATAGATATCTAGAAATAGAA
ATGAACTAATATATAGATAATCCAAATTGAAAAGAACTGTCTTTT-TTGTATACTTTCCCCGTTCTATTGCTACCGCGGG
TCTTATGGAATCGATCGGATCATATAGATATCCCTTCAACACAACATAGGTCATCGAAAAGATCTCAGACGACTCACCAA
AGCACGAAAGCCAGTTAGAAAATGGATTCCTATTTGAAGAGTGCCTAACCGCATGG------------------------
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---------------------------------------------------ATAAGCTCACATTAACCCGTCAATTTTGG
ATCCAATTCGGGATTTTTCTTGGGAAGTTTCGGGAAGAAATTGGAATTGAATAATATAGATTCATACAGAGGAAAAGGTT
CTCTATTGATGCAAACGCTGTACCTAGAGGATAGGGATAGAGGAAGAGGGAAAAATCGAAATGAAATAAATAAAGAATAA
AGCCAAAAAAATAAGTCGAAGATAGAAGAGCCCAGATTCCAAATGAAGAAATGGAAACTCGAAAAGGATCCTTCTGATTC
TCAAAGAATGAGGGGCAAGGGGATTGATACCGAGAAAGATTTCTTCTTATTATAAGACGTGATTTGATCTGCATATGTTT
GGTAAAAGAACA
>SNPs
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---------------------------------S----------------------------------------------
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---------------------------------------S----------------------------------------
-----------------------------------S-----------S---S----------------------------
-----------------------------------------S--------------------------------------
--S-----------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------S-----------
------------------------------------------------S-------------------------------
-------------------------------------------------------------S------------------
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--------S---------------------------------------------------S-----------------S-
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----------------------S---------------------------------------------------------
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--------------------------------------------------------S-----------------------
----------------------------S---------------------------------------------------
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-------------------------------S------------------------------------------------
---------------------------------------------------S----------------------------
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>forward_356
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----------------CCAAGGGCAGGTTCTTACGT--------------------------------------------
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>reverse_1497
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--------------------------------------------------------ATGCTTCTCTCATGGTACAATCCT
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