>input_sequence_85822
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATGGCT---TCTTCTTCTTCTTCCAGCC
CCCGAAGCAGCAGCGTAGCCACGTGCCTCGTGCTGGCTCTCCTGGTCGTCAGCCTCAGAGAAGCCTCCGCCTGGCGCCCG
CTCCGGCCGGCCGGCGACGTGTCCAGCGGTAGCGAGCTG---AGGG------ACCAGGCGATCGTTGACAGGTACCCGCC
ACTTTTGCCCACCATGCTGCCGAGGGGCCCGGCACCTCCGTCCGCCCCAAGCGG-CGGCACCAACGAGGCCGGGAACTGA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr2B_1_TraesCS2B01G565500
ACGGCATGCCGACGATGGTGCAAGCGGTGACGCTGGGAGTGTGGCTGACAGCATGGCGGTGTTGTATTGGCGTGCTAGGA
CGGCAGTGGCTGATTGTCGCAAACGACGAAAGCGTCGGGCGACGACAGCGAGGGCCGAGCCGGTGGTAGGGGTGGAGGTG
AGGAGGTGCGGGGGTGTGTGGGACATGCACGTAGGGAGTGGGTCGGGTGGGGAGGAGATGCGGGGAGTGGAGCAAGGGAG
GGGACGACCGAGTTCAACGCGAACCGTTTTTGACGTGATCGTGTGGGGAGGAGATCCAACAGTCGTGGTGGTACTGTGCA
GGTCGGATTCAACGGCCTGGAGGCGACCGGCGGAGTGTTTGGGCTGGCGCGCCCGCACCTAGTACTGGCCTATTAATTAG
ACTCGAGTCTAAACTAGATTGATCTCCTCCTGAACGCCTAGGCCTAGTTTTTTACTTTTCATGTGGTAAGCAATTCAAAC
TATTCAAAAATAACGCCTAGGCCTAGTTAGTTACTCTTATGCGGACGGAGGCAGTATGCACGAGACAAACGAGTTTGGTA
TGACTTAACCAAAGCTCATCTAACAAATGGATCGGATGAGTTGCTTTCATTAAAAAAAAATAGAAATTTCTCAAAAACAA
ATTACAAAAATAGAACAGCTGCTTGTACAAGATTATATGGATCCCACTGTGGAACAAGAACAACCCATCTTTT-------
--------------------------------------------------------------------------------
-----------CCATGTTGGCGCCTCTCTTCTCTAACCATGTTTTTTTTTTAGGGGAAATCTCTAACCAAGTCAACACAA
AAGGAGTGATGAGAACATTCGTAGCCACTCCTTCC------CTTCCACCTCACTCAGCCTCCCCGTTTGACCCCTTCCAC
CC-AACACTCACCG---CAA-------------------------ACTCCCATCACAGATGGACACAAAA---AGACCAT
CTCCTTTT-------CTTCTCCAAGAAAGATCTCTCATCGCTCAGGT---------CTC-AGCTCACAG-CCAG-TCCCT
GCACCGGCCCTCTCCTCCTCGTCGCTCGCGA----------A-------ACAATGGCT---TCTTCTTCTTCTTCCAGCC
CCCGAAGCAGCAGCGTAGCCACGTGCCTCGTGCTGGCTCTCCTGGTCGTCAGCCTCAGAGAAGCCTCCGCCTGGCGCCCG
CTCCGGCCGGCCGGCGACGTGTCCAGCGGTAGCGAGCTG---AGGG------ACCAGGCGATCGTTGACAGGTACCCGCC
ACTTTTGCCCACCATGCTGCCGAGGGGCCCGGCACCTCCGTCCGCCCCAAGCGG-CGGCACCAACGAGGCCGGGAACTGA
TTAAGCAAGCACAAGGTTTTGCCGTAGG--ATGGACCTGTCGATCTAC-----AGAATTCGTTAGGCACT----------
-------------------------------------A-ATAGTTGAACAGGATTCTTTGAGTGGGAAACGGACATAGGT
------C------------CCCC-AAAATTATACCTTCATTCTTTCGTTTGTCCCTTCAAGTAT---TTGAT---TGAAA
GAGTTCTGTCTT-----GACTCATTC-----AGAATCGATTGTTCATAATCACCGACTAAAGATGATACTGGCAGCAAAA
AT----ATCCCAGCTCCTGACCTCTGCAACAACTTTAGAAGATCAG-TTTTACAATCCACAAAGATAATTAGGAAAGGAA
AAATCAGTAATA---CCATTCTTGCCTGAAGAATTTACCCAAGAAAAAGAAAT--TACATGAATGCTGACTTGGAGCGAA
G--GTAGCTCCTCTGGATTCCATCTCCACTCCTCCTGGGATGCTATTTTTCCAAAAACTCCAAAATC------GTGCCAA
GTAATTTTTCTTTTAGACTAGAGTACTGAATGTGGTTAGCCAGAAAATGC---TATAATGTATAATTTATATGACACTCT
TTAGAGATTACTAGAAGACTGCCCCGCGCGCTGCTGCGGGAGTTTGTATGAAATAAAAATGTGGTATGAACTAATAAACC
AAGCTAATGGCTTTACAATTTCTCCTAGAAAGATAATTTTTT-ATCAATACTTTTAAAATAAATAAATAAATTTACATCT
CTATGTATAAGTGCAGAATTGGATGAAAACAAAACAAAATATG---------------------CATAGTGCTAGTACTG
GAGTATGAGCCGCATGCATGCATCAGTTTTTATTCGATTAAAACACTCTTTAGGCATCAT---CTACTATATGCACTGCA
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
GTTGGTGGCTCTTAATGGGTAGATCCAATGGCTAATGTAGTCCAATCGAGTATATCCAACGGCTAAACTAATTTAGGTGA
TGTGGTTCAAGGATAAGCAAGAGAATTCTTAGTAGTGGGGGCGAGCTATTTAGATATAACAGATAATAGATTATCGTTTT
CCATATTCGCAGT
>chrUn_1
ACGGCATGCCGACGATGGTGCAAGCGGTGACGCTGGGAGTGTGGCTGACAGCATGGCGGTGTTGTATTGGCGTGCTAGGA
CGGCAGTGGCTGATTGTCGCAAACGACGAAAGCGTCGGGCGACGACAGCGAGGGCCGAGCCGGTGGTAGGGGTGGAGGTG
AGGAGGTGCGGGGGTGTGTGGGACATGCACGTAGGGAGTGGGTCGGGTGGGGAGGAGATGCGGGGAGTGGAGCAAGGGAG
GGGACGACCGAGTTCAACGCGAACCGTTTTTGACGTGATCGTGTGGGGAGGAGATCCAACAGTCGTGGTGGTACTGTGCA
GGTCGGATTCAACGGCCTGGAGGCGACCGGCGGAGTGTTTGGGCTGGCGCGCCCGCACCTAGTACTGGCCTATTAATTAG
ACTCGAGTCTAAACTAGATTGATCTCCTCCTGAACGCCTAGGCCTAGTTTTTTACTTTTCATGTGGTAAGCAATTCAAAC
TATTCAAAAATAACGCCTAGGCCTAGTTAGTTACTCTTATGCGGACGGAGGCAGTATGCACGAGACAAACGAGTTTGGTA
TGACTTAACCAAAGCTCATCTAACAAATGGATCGGATGAGTTGCTTTCATTAAAAAAAAATAGAAATTTCTCAAAAACAA
ATTACAAAAATAGAACAGCTGCTTGTACAAGATTATATGGATCCCACTGTGGAACAAGAACAACCCATCTTTT-------
--------------------------------------------------------------------------------
-----------CCATGTTGGCGCCTCTCTTCTCTAACCATGTTTTTTTTTTAGGGGAAATCTCTAACCAAGTCAACACAA
AAGGAGTGATGAGAACATTCGTAGCCACTCCTTCC------CTTCCACCTCACTCAGCCTCCCCGTTTGACCCCTTCCAC
CC-AACACTCACCG---CAA-------------------------ACTCCCATCACAGATGGACACAAAA---AGACCAT
CTCCTTTT-------CTTCTCCAAGAAAGATCTCTCATCGCTCAGGT---------CTC-AGCTCACAG-CCAG-TCCCT
GCACCGGCCCTCTCCTCCTCGTCGCTCGCGA----------A-------ACAATGGCT---TCTTCTTCTTCTTCCAGCC
CCCGAAGCAGCAGCGTAGCCACGTGCCTCGTGCTGGCTCTCCTGGTCGTCAGCCTCAGAGAAGCCTCCGCCTGGCGCCCG
CTCCGGCCGGCCGGCGACGTGTCCAGCGGTAGCGAGCTG---AGGG------ACCAGGCGATCGT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr2A_477
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------AAAC
TATTCAAAAAGAACGCCTAGGTCTAGTTAGTTACTCTTATGCGGACGGAGGGAGTATGCACGAGACAAACGAGTTTGGTA
GCACTTAACCAAAGCTCAACTAAG-AATGGATCGGATGGGTTGCTTTCATCAAAAAATA--------TTCTTAAAAGCAA
ATCA-AAAAATAGAATAGCTGCTTCTACAAGATTATATAGATCCCATCGTGGAACAAGAACAATCCATCTTTTGACGCTC
CTGATAAGGTTATTCTTTTACTTGTAAACGATGCTACTTTAATTATGAATGAATAAAGGAGGAGAAGTTTATAATAAAAA
AACCATCTTTTCCACGTCGGCGCCTCTCTTCTTGAACCAAGTTTCTTTT---GGGGAAATCTCTAACCAAGTCAACACAA
AAGGAGTGATGAGAACATCCGTAGCCCCTCCTTCC------CTTCCACCTCACTTAGCCTCCCCGTTTGACCCCTTCCAC
CC-AACACTCACC---ACAA-------------------------ACTCCCATCACAGATGGACACAAAA---AGACCAT
CTCCCTTT-------CTTCTCCAAGAAAGATTTCTCATCGCTCAGGT---------CTC-AGCTCACAG-CCAG-TCCCT
GCACCGACCCTCTCCTCCTCGTCGCTCGCGA----------A-------ACACTGGCTTCCTCTTCTTCTTCTTCCAGCG
CCCGAAGCGGCCGCGTAGCCACGTGCCTCGTGCTGGCTCTCCTGGCCGTCAGCCTCAGAGAAGCCTCCGCCGGGCGCCCG
CTCCGGCCGGCCGGCGACGCGTCCAGCGATAGCGAGCAG---AAGG------ACCAGGCGATCGTCGACAAGTACGCGCC
ACTTTTGCCCACCATGCTGCCGAGGGGCCCGACTCCTCCGTCCGCCCCGAGCGG-CGGCACCAACGAGGCCGGGAACTGA
TTAAGCAAGCACAAGGTTTTGCCGTAGG--ATGGACATGTCGATCTAC-----AGAAATCGCTAGGCATA----------
-------------------------------------A-AT-------CATGATTGTTTGAGTGGGAAACGGACATATAG
TGTAGGC------------CTCC-AAAACTATACCTTCATTCTTTCGTTTGTCCCTTCAAGTAT---TGTAT---TGAAA
AAGTACTGTCTTCATCC-ATTAATTCTTTAAAGAATCGATTGCTCATAATCACCGACTCAAGATGATACTGGCAGCAAGG
AC----ATCCCAGCTCCTGACCTCTGCAACAACTTTAGAAGATAGG-TTTTACTGTCCA----------------AA-AA
AAATCAGTAATA---CCATTCTTACCTGAAGAACTTACCCAGGAACAAAAAACTCTACATGAACGCTGACTTGGAGCGAT
ATCGTAGCTCCTCTGGATTTCATCTCCACTCCTCCTGGGATGCTATTTTTCCAAAAGCTCCAACATTAGGCAGGTGCCAA
CTAATTTTTCTTTTAGACTAGAGTACTGAATGTGTTCAGCAAGAAAATGCTAGTATAATGTATAATTTATATGACACTCT
TTAGAGATTA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr7D_646
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----AAAAATAGAATAGCTGCTTGTACAAGATTATATGGATCCCACTATGGAACAAGAACAACCCATCTTCT-------
--------------------------------------------------------------------------------
-----------CCACGTT-GCGCCTCTCT------------------------------TCTCTAACCAAGTCAACACAA
AAGGAGTGATGAGAACATTCGTAGCCCCTCCTTCC------CTTCCACCTCACTCAGCCTCCCCGTTTGACCCCTTCCAC
CC-AACACTCACC---ACAA-------------------------ACTCCCATCACAGATGGACACAAAA---AGATCAT
CTCCCTCAGCCTTCCCTTCTCCAAGAAAGATCTCTCATTGCTCA-GT---------CTC-AGCTCACAG-CCAG-TCCCT
GCACCGACCCTCTCCTCATTGTCGCTCGCGA----------A-------ACAATGGCTTCTTCTTCTTCTTCTTCCAGCG
CCCGAAGCAGCCGCATAGCCACGTGCCTCGTTCTGGTTCTCCTGGTCGTCAGCCTCAGAGAAGCCTCCGCCGGGCGCCCG
CTCCGGCCGGCCCGCGACGTGTCCAGTGATAGCGAGCTG---AAGG------ACCAGGCGATCGTCGACAAGTATGCGCC
ACTTCTGCCCACCATGCTGCCGAGGGGCCTGGCGCCTCCGTCCGCCCCGAGCGG-CGGCACCAACGAGGCCGGGAACTGA
TTAAGCTGTCGA------------------------------ATTACA-----AAAATTCGTTAGGCATA----------
-------------------------------------A-ATAGTTTTACAGGATTGTTTGAGTGGTAAACGGACATATAG
TGTAGGC------------CTCC-AAAAGTATACCTTCATTCTTTCGTTTGTCCCTTGAAGAAT---TTGAT---TGAAA
GAGTTCTGTTTT-----GATTCATTCTTTAAAGAATCGATTGTTCATAATCACCAAGTCAAGATGATACTGGCAGCAAAA
AT----GCCCAAGCTCCTGACCTCTGCAACAACTTTAGAAGACAAG-TTTTACAATCCACACAGATAATTAGGAGAGGAA
AAATCAGTAATA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr7D_762
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TCTCTAACCAAGTCAACACAA
GAGGAGTGATGAGAACATTCCCAGCCCCTTCCACCTG---------ACCTCACTCAGCCAGCCCGTTTGACCCGTCTCAT
CC-AACACTCCCC---ACCACCCATCGCTATATATCAA------------CACCACAGATAAACACAAAAAGCAGACCAT
CTCCCTTT-------CTTCTCCAAGAAACATCTCTCCTTGCTCA-GCAGCTCAGGCCTCAAGCTTACTGCAAAGTTCCCT
CCATCGATCCTCTGCTCGTGTCTTAGTTTGCAAGAAAAAACA-------ATGG------------CTTCTTCTTCCAGCG
CCCGAAGCAGTCGCGTGGCCACATGCCTCGTGCTGCTTCTCTTGGTCGTCAGCCTGCGAGAAGCCTCCGCGGCGCGTCCA
CTCCGGCCGGCCGGCGACGTGTCCAGCGAGG------TG---AAGG------ACCAGGCGATCGTCGACAAGTACGCGCC
GCTTCTGCTAGCCATGCTGCCAAGGGCCCCGGCGCCGCCGTCCGCCCCGAGCGG-TGGCACGAACGAGGCTGGGAACTGA
TGAAGCAACCATAGGGTTTTCCACTAGG--ACAG-------------------AGAAATCGCTAGGCATAC----GTATG
CCGAGTAGTTGATGGTTTGGT------------TACAAGATGGTTGTACAGAACTGTAAGAGTGAGAAGC----------
-GTAGGATACTAGGATATACCCC-AAAATTATACCTTCATTCTTTCGTTTATCCCTTCAAGTAT---TTGTTGATTGAAA
GAG-----TTCTGTCGTGATCCATTCTTTGAATAATTGGTTGTTAATTATCACCTATGCAAGATGATACTGGCAGCAAGA
ATTAATGTCCCAGCTCCTCAC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr2B_763
CTCAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CCAAGTCAACACAC
AAGGAATGATGAGAACATTCCGGGCTTCTTCCAT------------------CTCAGCCTCCCCGTTTGACCCCTTCCAC
TC-AACACTCACCTCCAGCTCCCATCACTATATATGAGC-------------------------------AGCAGACCTT
CTCCCTTT-------CTTCTCCAAGAAACATCTCTCCTTGCTCA-GCAGCTCAGGCCTC-AGCTTACTGCAAAGTTCCCT
CCATCGATACTCTCCCCGCCGTCGCTCGCGA----------A-------ACAATTAATGG--CTTCCTCTTCTTCCAGCG
CTCGAAGCAGCCGCGTGGCCACATGCCTCGTGCTGCTTCTCCTGGTCGTCAGCCTGCGAGAAGCCTCCGCCGCGCGCCCG
CTCCGGCCGGCCGGCGACGTGTCCAGCGAGG------TG---AAGGAGAAGGACCAGGCGGTCGTCGACAAGTACACGCC
GCTTCTGCTCGCCATGCTGCCGAGGGCCCCGACTCCGCCGTCCGCCCCGAGCGG-CGGCACGAACGAGGCCAGGAACTGA
TGAAGCAACCGCAGGGTTTTCCAGTAGG--ATAGATGGATCGATCTCTACAAGAGAAATCGTTCAGCATAC----ATATG
CTCACTGGCTGATAGTTTGTT-CTGCTTTGCAGTAAAAGATAGTTGTACAGGATTGTTAGAGTGGGAAAA----------
TGTAGGATACTA-------CTCC-AAAATTATACCTTCATTCTTTCGTTTATCCCTTGAAGTAT---TTGTTGATTGAAA
GAG-----TTCTGTCGCGATCCATTCTCTGAAGAATTGATTGTTCATACTCACCGATGCAAGATGATACTCACAGTAAGA
AT----ATCCCAGCTCCTGGCCTCTGCAACAACTTTCAAAGATAAG-TTT-ACAATCTACACAGAATATCAAG-GAA-AA
AAAACATTAACGCCGCCATTCTTACATGACGAATTGACCTAA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr2A_770
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CAAGTCAACACAC
GAGGAGTGATGAGAAGATTCGCAGCCC---CTTCCCTTCCAGTTCCACCTCACTCAGCCTCCCCGTTTGACCCCTTCCAC
CCCAACACTCGA---CACCGCCCATCGCTATATATGAGCAGCTCCACACCCAACACAGATAAACACAAAAGGCAGACCAT
CACCCTTT-------CTTCTCCAA----CATCTCTCATTGCTC----------------------ACTTCCAAGTTCCCT
CCATCGATCATCTCCCCGTCGCCGCTCACGA----------AACAACTCATGG------------CTTCTTCCTCCAGCG
CCCGAAGCAGCCGTGTGGCCACATGCCTCGTGCTGCTTCTCCTGGCCGTCAGCCTCCGAGAAGCCTCGGCCGCGAGGCCG
CTCCGGCCAGCCGTCGACATGCCTAGCGAGG------TGCTCAAGG------ACCAGGTGATCGTCAACAAGTACGCGCC
GCTTCTGCTCGCCATGCTGCCGAGGGGCCCCGTGACGCCGTCCGGCCCCAGCGG-CGGCACGAACGAGGCCGGGAACTGA
TTGAGCAAGCGCAGGGTTTCCCTTAGGATAATAGATCCATCGATCTAA-----AGAAATCTTTAGGCA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr2D_770
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CAAGTCAACACAC
GAGGACTGATGAGAAGATTCGCAGCCC---CTTCC------CTTCCACCTCACTCAGCCTCCCCGTTTGACCCCTTCCAC
CCCAACACTCGA---CACCGCCCATCGCTATATATGAGCAGCTCCACACCCAACACAGATAAACACAAAAGGCAGACCTT
CTCCCTTT-------CTTCTTCAAGAAAGATCTCTCGCTGCTCA----------------------CTGCCAAGTTCCCT
CCATCGATCATCTCCCCGTCGCCGCTCACGA----------AACAATTCATGG------------CTTCTTCTTCCAGCG
CCCGAAGCAGCCGTGTGGCCACATGCCTCGTGCTGCTTCTCCTGGTCGTCAGCCTCCGAGAAGCCTCGGCCGCGAGGCCG
CTCCCGCCAGCCGTTGACATGCCTAGCGAGG------TGCCCAAGG------ACCAGGTCATCGTCGACAAGTACGCGCC
GCTTCTGCTCGCCATGCTGCCGAGGGGCCCCGTGACGCCATCCGGCCCCAGCGG-CGGCACGAACGAGGCCGGGAACTGA
TTGAGCAAGCGCAGAGCTTGCCGGTAGG--ATGGATGTATAGATCTCT-----AGAAATCGTCAGGCATAC----A----
----GTGGTAGATGCTATGGTACTGTTTTGCAGTACAAGATACTCGTACAGGATTGTTAG--TGGGAAATGGACATATAG
TGTAGGTCTGTAGGATATACCCC-AAAAATATAACTTCATTCTTTCGTTTGTCCCTCCAAGTAT---TTGATTAAGGAGT
TTT-----TTCT-----TATCCATTCTTCAAAAAATTGATTGTTCATAGTCACCGATTCAAGATGATACTGGCTGTAAGA
AT----GTCCCAGCTCCTGACCTCTGCAACAACTTTAAAAGATAAG-TTT-ACATTCTATGCAGATAATTACGAGGGGAA
AAAACAGTAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr2A_792
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TGAGAACATTCCCA---ACCCCTTCC------GTTCCACCTCGCTCAGCCTCCCCGTTTGACCCCTTCCAC
TC-AACACTCACCTCCAACTCCCATCACTATAAAT----AGCTCCACACCCAACGCAGATGAACACAAAAACCAGACCAT
CTCCCTTT-------CTTCTCCAGGAAAGATCTCTCGTTGCTCA-G--------GCCTC-AGCTCACTG-CAAGTTCCCT
GCATCGATCCTCTCCTCGTCGTCGCTCGCTCGCCAAC------------------AATGG--CTTCTTCTTCTCCCAGCG
ACCGAAGCAGCCGCGTGGCCACATGCCTCGTGCTGATTCTCCTGGTCGTCACCCTGCGAGAAGCCTCTGCCACGCGTCCG
CTGCGGCCGGCCGACGATGTG---------------------AAGG------ACCAGGCCATTGTTGACAAGTACGCACC
GCTCCTGCTCACCATGCTGCCGAGGGGCCCTGCGCCGCCTTTGGCCCCAAGCGGTTGGCACGAATGAGGACAGGAACTGA
TTGAGCAAGCGCAGGGCTTGCCGCTACG--ATGAGTCTATAGATCTCT-----AGAAATCGTTAGCCA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr2B_876
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CCCAACACAGATAAACACAAAAAGCAGACCAT
CTCCCTTT-------CTTCTCCAAGAAAGATCTCTCCTTGCTCA-G--------GCCTC-AGCTCACTG-CAAGTTCCCT
ACATCGATCCTCTCCCCGTCGTCGGTCGCGA----------A-------ACAACTAATGG--CTTCTTCTTCTTCCAGCG
CCCGAGGCAGCCGCGTGGCCACATGCCTCGTGCTGGTTCTCCTGCTCGTCAGCATGCGAGAAGCCTCAGCCGCGCGGCCG
CTCCGGCCGGCCGGCGACGTGTCCAGCGAGG------TG---AAGG------ACCAGGCGGTCCTCGACAAGTACGCGCC
GCTTCTGCTCGCCATGCTGCCGAGGGCCCCGACTCCGCCTTCCGCCCCGAGCGG-TGGCACGAACGAGGCCAGGAACTGA
TGAAGCACCCGCAAGGTTTTCCACTAGA--ATGGAT-GATCGATCTCTACAAGAGAAATCGTT--------------ATG
CTGAGTGGTTGATGGTTTGCT-CTGTTTAGTAGTACAAGATAGTTATACAGGACAGTTACAGTAGGAAAAGGACATATTG
TGTAGGATACTAGGATATACCCC-AAAATTATACCTTCATTCTTTCGTTTGTCCCTTGAAGTAC---TTGTTGATTGAAA
GAG-----TTCTGTAGTGATCCATTCTTTGAAGAATTGATTGTTCATACTCACCGATTCAAGATGATACTCATAGTAAGA
AT----ATCCCAGCTCCTGGCCTCCGCAGCAGCTTTCAAAGATAAG-TTT-ACAATCTACACAGAATATCAAG-GGGGGA
AAAACAGTAAAGCCGCCATTCTGACCTGAAGAATTTACCCAAAAGAAAA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr2D_876
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CCCAACACAGATAAACACAAAAAGCAGACCCT
CTTCCTTT-------CTTCTCAAAGAAAGTTCTCTCCTTGCTCA-G--------GCCTC-AGCTCACTG-CAAATTCCCT
ACATCGATCCTCTCCCCATCGTCGCTTGCAA----------A-------ATGG------------CTTCTTCTTCCAGCG
CTCGAAGCAGCTGTGTGGCCACATGCCTCGTGCTGCTTCTCCTGCTCGTCAGCCTGCGAGAAGCCTCCGCCGCGCGCCCG
CTACGGCCGGCCGGCGACGTGTCCAGCGAGG------TG---AAGT------ACCCGGCGGTCGTCGACAAGTACGCGCC
CCTTCTGCTCGCCATGCTGCCGAGGGCCCCGACTCCGCCGTCCGCCCCGAGCGG-TGGCACGAACGAGGCCAGGAACTGA
TCGATCTATAG--------------------CAC-------------------AGAAATCGTTAGGCATACCTACGTATA
CTCAGTGGTTGATGGTTTGTT-CTGTTTTGCAGTACAA-AAACTTGTACAGGATTGTTAGAGTGGGAAACGGACGTATAG
TGTAGGATATTA-------CCCCAAAAATTATACCTTCATTCTTTCGTTTGTCCCTTGAAGTACTACTTGTTGATTGAAA
GAG-----TTCTGTCGTGATCCATTCTTTGAAGAATTGACTGTTCATAGTCACCGATGCAAGATGATACTCACAATAAGA
AT----ATCCCAGCTCTTGACCTCTGCAACAACTCTCAGAGGTAAGTTTT-ACAACCCACACAGATAATTAGG-AAA-AA
AACAGTAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr7A_1794
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACTAGAAGAATGCCCCGCGCGTTGTTGCAGGAGTTTGTATGAAATAAAAA-GTGGTCTGAACTAATCAACC
AAGCTAATGGCTTTACAGTTTCTCCTAGAAGGCTAATTTGTTTATCAATATTTTGAAAATAAATAAATAAATTTACATCT
CTATGTATAAGTGCAGAATTGGATGAAAACAAAACAAAATATGCGTGCATGTGTCACTTTCTTTCATAGTGTTAGTACTG
GAGTATGAGACGCATGCATGCATCAGTTTTTAATTGATTAAAACACTCTTGACGCATCATTTACTACTATATGCACTGCA
TGTAAACCCGGTCATGGACAGCCCGGCCCGACGACCCGGCCCAAGCCCGGCCCGAAAAACCCGGGCCGGGCCGGGCCGGG
CTTGACATTCGGGCCGGGCTCGGGCCTTGTTTTGCAGCCCGAAAGATAGTTCGGGCCGGGCTTGGGCTTCACTTTTCATG
TATTTCGGGCCGGGCTTTCGGGCTTCGGGCCGGGCTTGCACGTGCGTACACTGAAAAATAGCGTTCGGGCCGGGCTTTCA
GGCTTCGGGCTTCATTTCGGGCCGGGCTCGGGCTTGAAAACAAGGAGTATTTCGGGCTTCGGGCCGGGCTCGGGCTTGAG
AAATGAAGGTCGGGCTTTTACAAGCCCGGCCCGAAACCCGGCCCGGCCCGGCGTTTGCCCGGGTTTAACTGCATGCATGC
GTTGGTGGCTCTTAATGGATAGATCCAATGGCTAATGTAGTCCGATCGAGTATATCCAACGGCTAAACTAATTTAGGTGA
TGTGGCTCAAGGAGAAGCAAGAGAATTCT-------GGGGGCTAGCTATTTAGATATAGTAGAT----------------
-------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S----S----
---------------------------------S----------------------------------------------
--------------------------------------------------------------------SS----------
----------------------------------------------S--------S---------------------SSS
--------------------------------------------------------------------------------
-------------------S--------------------------------------S---------------------
-------------------------------------------S-----------------S------------------
-----------------------S------------------------S---S----------S---------------S
S------------------S------------------------------------S------S--S-------------
S---------------------------------S-S---S---------------------------------------
------------------S-----------S--S---S---------------------S-----S---------S----
-----------------S------------S-S------S----------S---S-------------------------
-----------------------------------------------------------------------S--------
---------S----------------------S-S---------------S-S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S------------------------S------------------------------------
-----S-------S---------------SSSSSSS------S---------------SS----SSSSSSSSSSSSSSSS
SSSSSSSSSSSSS
>forward_1351
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GACCAGGCGATCGTTGACAG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>reverse_2911
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AGTAGTGGGGGCGAGCTATT------------------------------
-------------
