>input_sequence_85815
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--------------------------------------ATGCATGAGATGCCGGCCAGCCAGAGGTTTCTTTTCTTCCTC
GTCGCCTTGCTCCTCCTGGTGGCGACGGCGGCGGCCGGAGGGGACGACCACGCCGCCGGCACGACCGAGGCGGCCGCGGA
GGCGCGTCCGCCCGACGCGGCGTTCGACGTGCGGGCGAGGAAGTGGTGGCCGCGGGTCCCGGCG---ACGGAGGGCCTCG
TCCGGGGCAGCGAGCGCCGGGTGCCCAACTCCTCCGACCCGCTCCACAACCGCTGA------------------------
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>chr2B_1_TraesCS2B01G210300
CTCAAACTTCGGATTAGGATTCAGTGTCGCGGGCTGACAGCGCCCAGAGCAGATTCCTCTCTGCCCCCGTCGTCGCTTCT
CCCGCACGGGAGAGACAC----GACAGGCGGCGCTTTGTAGCAGTTGGAGCCCCAAAAGCAGCCCCGGCCTTGTCCATCG
CGAGCGGAAAGCTGAGGTC----ACGGGAACACGCGACCCAGCGCCCGAGAGGCACGGCCATGGCGCCGCGACGCACGCT
CTCGCTCTCCCTCTCTCTCTCT-CTGCTGCTGCATGGCCGCTGGTTTGTGGTTCGGCAAAAGG--------------AGA
AAAGAAAGATGCTTC------------------------------------------TCCCTCGCGCATGGAAAGCCGTG
TCCCCTGTTTCCCGGGCCGTTCACCTAATCTGCCGCTAACCTCCGATTCTTCACTCACTAAACTCCTCACCTAAAAGCGA
CATGGACACCTGTGCCTTGTCCGGGACTCCCATGCCTTAATCTACCAAGGTTAACGTATTC-TATCTCCATAACATAACA
TACGACGAGCTTTTGTACACATAACACGGTACACAGGGAGATGATATTTGTAACATGGGA--------------------
------------------------------------TTATAATTTTACTTTGAAATACTCCTA----AGCAACGAATGGG
TCAGAGACAAGAACCGGAACAGACCTTCTGCTGATGT---CTGCGCCTGCTGCCCGCTGTTGCCAAGATTCTCTGCGT--
---GTGGCAACCATTCCTACCCTTTCAGTCATGCGGTATACAT-GCCAAATGATTGTGTCCTCGTAGCTCCTGCCTCGCT
------ACGGCAGTATAAAGGGCTTTCCAACCTTGACTGCTGCACGGCTCGCTGTTCTCCCCGTC----AAAACGTGTTC
TACGCCACTTCGCTAATGCGCTGAAGTTTTCTCTCGGCCGCGCGCGCTGTTACATTGGCAGCCGAGCAGAGCTGCA--GT
AGTACACTGCCTCAGGAGATTCAGCTTCTCTCGTGCACAGT----CACAGAGCAGCAGGGTACC-------ACAGCCCTC
TGATCCATCCACTCTGTCTGGTCCTCTTGCCCCCATGAATGCATGAGATGCCGGCCAGCCAGAGGTTTCTTTTCTTCCTC
GTCGCCTTGCTCCTCCTGGTGGCGACGGCGGCGGCCGGAGGGGACGACCACGCCGCCGGCACGACCGAGGCGGCCGCGGA
GGCGCGTCCGCCCGACGCGGCGTTCGACGTGCGGGCGAGGAAGTGGTGGCCGCGGGTCCCGGCG---ACGGAGGGCCTCG
TCCGGGGCAGCGAGCGCCGGGTGCCCAACTCCTCCGACCCGCTCCACAACCGCTGACGTGATTACACCACCGCTGCCTGC
TCCCGTGCCATCCGATTCTTGGCGCTCCCGCGTCGCCCATGCTTCATGCTTGGATCGTGGCTGCCG-----------GCT
CTG---CTAGATCAGAGGCCCAAGATGCGTATACAAATGTAGCTCATTTTGCCTTTTGTTGGCTCCAGTGTTTTGTAATG
AGAAATTGATCGGCGTTTTGCCGATCTGTGCATACACATTTGACAT--TCCTTCTTCTTATAGATGACTAA-----AGTG
CAGTTCATAGTGGGCAATTCGATAATACTGTCTTGTTTTCGCTTCAATTTCTGCAAAAAGAGATGGCATGTCGGGCCGCG
GACCCACTTGTCAGCCTACGCCAGTCGAAGCCTTCGCCTCAACGGGTTGCGTTCTCCAGTCTCCGCCTCCGCTGCGTCAA
AACATCAAACGGCTTGCGCGCGCGACGCACCGGTTCAGTGATCAACCGCAAGCGCCGCCGCCGCCGC------CCGAATG
TCCATCGCTGCCGGCGTCGCCCTCGCCGTGGCCGACGCCGTGTGGGCTCAGATCAAGGCCGGGGGACACGCCACGGACGA
GCACCTGTCCATGTAAGTGAATCCAAACAGGCCCGGCACCGCCGCGGCGCCA-CCGTCTCGCTCGGTTGTTAATTCATGC
ACGCCTCGCCGTCTCGAGCCCCTGACCTGTTCTGGCGTGCGTGCAGCCTCGACCACCTGTTCGGCAAGAACATGCTGCGC
GCCTGCAAGATCCTCGACGAGGGCGGTGTCCGCCGCGTCACCGGCGCGCCCAGCGGCCGCTCGCTCTTCCTGGTTGGCTC
CCGCATCTTACCTTTCCGTCCCCACGGCTGCTCGTGTTGTGGCCGAGCCAGCAGGCGATCGGCCGGTTGACGACGGCTTG
TTTTGGTTTGGCGCTGCAGGTGAT---GGGGGAGTCCAAGAGGAAGGAGGAGTACATCTGCTTCCCGGAGCACCTCTGCA
CCTGCTACTCCTTCTTCTATGACATCGTCGGCCGTGGTGAGCAGCTC
>chr2D_1
CTCAAACTTGGGATTAGGATTCAGTGTCGGGGGCTGACAGCGCCCAGAGCAGATTCCTCTCTGCCCCCGTCGTCGCTTCT
CCCGCACGGGAGAGACACGCACGACAGGCGGCGCTTTGTAGCAGTTGGAGCCCCAAAAGCAGCCCCGGCCTTGTCCGTC-
CGAGCGGAAAGCTGA------------GGACACGCGACCCAGCGCCCGAGAGGCACGGCCATGGCGCCGCGACGCACGCT
CTCGCTCCCCCTCTCCCTCTCTGCTGCTGCTGCATGGCCGCTGGCTTCTGGTTCGGCAAAAGGAGAGA------------
AAAGAAAGGTGCTGGGCATGCATAGGCTGTAGAGCGAGCGA----GCTCAAGGCCTTTCCCTCGCGCATGGAAAGCCGTG
TCCCCTGTTTCCCGGGCCGTTCACCTAATCTGCCGCTAACCTCCGATTCTTC------------CCTCACCTAAAAGCGT
CATGGACACCTGTGCCTTGTCCGGGACTCCCATGCCTTAATCTCACAAGATTAACGTATTC-TATCTCCATAACATAAGA
CATGGAGAT---------------------------GGAGATGATATTTGACTATTTTGACATGGAAACGGCTTGAAGTT
TGAACCACATTTTATTCTTTTGGCACTTTGAAGCAGTTGCAATTTCACTTCGAAATAGAGTAGTGCTAGCAACGAATGGG
TCAGAGACAAGAGCCGGAACAGGCCTTCTGCTGATGTCTGCTGCGCCTGCTGTCCGCTGTTGCCAAGATTCTCTGCGTTG
CGTGTGGCAAGCATTCCTACCCTTTCAGTCATGCGGTATACATGGCCAAATGATTGTGTCCTCGTAGCCCCTGCCTCGCT
TAGGGCACGGCGGTATAAAGGGCTTTCCAACCTTGACTGCTGCACGGCTCGCTCTTCTCCCCGTCCGTCAAAACGTGTTC
TACGCCACTTCGCCAATGCGCTGAAGTTTTCTCTCGGCCGCGCGCGCTGTTACATTGGCAGCCGAGCAGAGCAGAGCTGT
AGTACACTGCCTCAGGAGACTCAGCTTCTCTCGTGCACAGT----CACAGAGCGGCAGGGTACC-------ACAGCCCTC
TGATCCATCCACTCTGTCTGGTCCTCTTGCCCCCATGAATGCATGAGATGCCGGCCAGCCAGAGGTTTCTTTTCTTCCTC
GTCGCCTTCCTCCTCCTGGCGGCGACGGCGTCGGCCGGAGGGGACGACCACGCCGCCGGCACGAGC------------GA
GGCGCGTCCGCCCGACGCGGCGTTCGACGTGCGGGCGAGGAAGTGGTGGCCGCGGGTCCCGGCG---ACGGACGGCCTCG
TCAGGGGCAGCGAGCGCCGGGTGCCCAACTCCTCCGACCCGCTCCACAACCGCTGACGTGACTACAACACCGC-------
--------CACCCGATTCTTGGCGCTCTCGCATCGCCCCTGC----TGCTTGGATCGTGGCTGCCGAATGTGGCGGCGCT
CTGCTACTAGATCAGAGGCCCAAGATGCGTATACAAATGTAGCTCATTTTGCTTTTTGTTGGCTCCAGTGTTTTGTAATG
AGAAATTGATCGGCGTTTTGCCGAGCTGTGCATACACATTTCACATTTTCCTTCTTCT--TAGATGAACTA-----AGTG
CAGTTTACAGTGAGCAATTCGATTG---TATTTTGTTTTTGCTTCTGCTTCTG----AAGAAAAGGCATGTCGGGCCACG
GGCCCACTTGTCACCCTACCCTGTAGCC-----TCGCCTCGACGGGTCGCACTCTCCGGTCTACGCCTCCGCTGCGGCAA
AACATCAAACGGCTTGCGCGCGCGACCCACCAGTCCAGTGATCCACCGCAACCGACGCCGCCGCCGCCGC---CCGAATG
TCCGTCGCTGCCGGCGTCGCCCTCGCCGTGGCCGACGCCGTGTGGGCGCAGATCAAGGCCGCGGGACACGCCACCGACGA
GCACCTGTCCATGTAAGTGAATCCAAACAGGCCCGGCACCGCCGCGGCGCCA-CCGTCTCGCTCGGTTGTTA-TTCATGC
ACGCCTCGCCGTCTCGAGCCCCTGACCGGTTCTGGCGTGCGTGCAGCCTCGACCACCTGTTCGGCAAGAACATGCTGCGC
GCCTGCAAGATCCTCGACGAGGGCGGCGTCCGCCGCGTCACCGGCGCGCCCAGCGGCCGCTCGCTCTTCCTGGTCGGCTC
CCGCGCCTTACCTTTCTGTCCCCACGGCTGCTCGTGTTGTGGCCGAGCCAGCAGGCGATCGGCCGGTTGACGACGGCTTG
CTTTGGTTTGGCGCTGCAGGTGAT---GGGGGAGTCCAAGAGGAAGGAGGAGTACATCTGCTTCCCGGAGCACCTCTGCA
CCTGCTACTCCTTCTTCTATGACATCGTCGGCCGCGGTGAGCAGCTC
>chr2A_1
CTCAAGCTTCGGATTAGGATTCAGTGTCGCGGGCTGACAGCGCCCAGAGCAGATTCCTCTCTGCCCCCGTCGTCACTTCT
CCCGCACGGGAGAGACACGCACGACAGGCTGCGCTTTGTAGCAGTTGGAGCCCCAAAAGCAGCCCCGGCCTTGTCCGTCG
CGAGCGGAAAGCTGAGGTCGCTCACGGGGACACGCGACCCAGCGCCCGAGAGGCACGGCCATGGCGCCGCGACGCACGCT
CTCGCTCCCCCTCTGCC--------GCCGCTGCATGGCCGCTGGCTTCTGGCTCGGCAAAAGGAGAGAAAAGAAAGAAGA
AAAGAAAGATGCTGGGCATGCATAGGCTGTGGAGCGAGCGAGCTCGCTCAAGGCCTTTCCCTCGCGCATGGAAAGCCGTG
TCCCCTGTTTCCCGGGCCGTTCACCTAATCTGCCGCTAACCTCCGATTCTTCGCTCACTAAACTCCTCACCTAAAAGCGT
CATGGACACCTGTGCCTTGTCCGGGACTCCCATGCCTTAATCTCACAAAATTAACCTACTAGTATCTCCGTAACATAAGA
CATGGAGAT---------------------------GGAGATGATATTTGACTATTTTGACGTGGTGATGGCTTGAAGTT
TGAACCACATTTTATTCTTTTGGCACTTTGAACCAGTTGTAATTTCACTTCGAAATAGAGTAGTGCTAGCAACGAATGGG
TCAGAGACAAGAGCCGGAACAGGCCTTCTGCTGATGTCTG---CGCCTGCTGCCCGCTGTTGCCAAGATTCTCTGCGT--
---GTGGCAAGCATTCCTACCCTTTCAGTCATGCGGTATACATGGCCGAATGATTGTGTCCTCGTAGCTCCTGCCTCGCT
------ACGGCAGTATAAAGGGCTTTCCAACTTTGACTGTTGCACGGTACCACTA------------------------C
TACGCCACTTCGCTAATCCGCTCAAGTTTTCTCTCGGCCGCGGGCGCTGTTACATTGGCAGCAGAGCAGAGC--------
--------GCCTCAGGAGATTCAGCTTCTCTCGTGCACACGCACACACAGAGCAGCAGGGTACTACAGTCTACAGCCCAC
TGATCCATCCACTCTGTCTGGTCCTCTTGCCCCCATGAATGCATGAGATGCCGGCCAGCCAGAGGTTCCTTTTCTTCCTC
GTCGCCTTCCTCCTCCTGGGGGCGACGGCGGCGGCCGGAGGGGACGGCCACGCCGCCGGCACGACCGAGGCGGCCGCGGA
GGCGCGCTCGCCCGACGCGGCGTTCGACGTGCGGGCGAGGAAGTGGTGGCCGCGGGTCCCGGCGACCACGGACGGCCTCG
TCAGGGGCAGCGAGCGCCGGGTGCCCAACTCCTCCGACCCGCTCCACAACCGCTGACGTGATTACACCACCGCTGCCTGC
TCCCGTGCCATCCGATTCTTGGCGCTCCCGCGTCGCC-------CATGCTTGGATCGTGGCTTCCGAATGTGGCGGCGCT
CTG---CTAGATCAGAGGCCCAAGATGCGTATACAAATGTAGCTCATTTTGCTTTTTGTTGGCTCCGGTGTTTTGTAATG
AGAAATTGATCGGCGTTTTGCCGACCTGTGCATACACATTTCACATTTTCCTTCTTCT--TAGTTGAGCTAGCTGGAGTT
CAGTTTATAGTGGAAAATTCGATTT---TATTTTGTTTTCGTTTCTGTTTCTGCAAAAAAAAATGGCATGTCGGCCCACG
G--CCACTTGTCAGCCTACCCTGAAGCC-----TCGCCTCGACGGGTCGCACTCTCCGGTCTCCGCCTCCGCTGCGTCAA
AACATCAAACGGCTTGCGCGCGCAACCCACCAGTCCAGTGATCCACCGCAACCGACGCCGCCGCCGTCGC---CCGAATG
TCCGTCGCTGCCGGCGTCGCCCTCGCCGTGGCCGACGCCGTGTGGGCGCAGATCAAGGCCGCGGGACACGCCACCGACGA
GCACCTGTCCATGTAAGTGAATCCAAACAGGCCCGGCACCGCCGCGGCGCCA-CCGTCTCGCTCGGTTGTTA-TTCATGC
GCGCCTCGCCGTCTCGACCCCCTGACCGGTTCTGGCGTGCGTGCAGCCTCGACCACCTGTTCGGCAAGAACATGCTGCGC
GCCTGCAAGATCCTCGACGAGGGCGGCGTCCGCCGCGTCACCGGCGCGCCCAGCGGCCGCTCGCTCTTCCTGGTCTGCTC
CTGCGCCTTACCTTTCGGTTCCCACGGCTGCTCGTGCTGTGGCCGAGCCAGCAGGCGATCGGCCGGTTGACGACGGCTTG
CTTTGGATTGGCGCTGCAGGTGAT---GGGGGAGTCCAAGAGGAAGGAGGAGTACATCTGCTTCCCGGAGCACCTCTGCA
CCTGCTACTCCTTCTTCTATGACATCGTCGGCCGCGGTGAGCAGCTC
>chr2A_1656
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-----------------------------------------------------------------------------CAA
AACATCAAACGGCTTGCGCGTGTGACCCACCAGTCCAGTGATCCACCACAACCGCCGCCGCCGCTGCCCCTGACCAAATG
TCCGTTGCTGCCGGCATCACCCTTGCCGTGGCCGACGCCGTGTGGGTGCAAATCAAGGTTGCGGGGCACGCCACCGGCGA
GTACCTGTCCATGTAAGTGAATCCAAACAGGCCCGGCACCGCCGCGGCGCCACCCGTCTCACTCGGTTGTTA-TTCATGC
ACACCTCGCCGTCTTGAGCCCCTGACCAGTTCTGGCATGTGTGCAACCTTGACCACCTGTTTGGCAAGAACATGCTGCCC
GCCTACAAGATCCTCGACGAGGGTGGCATCCGCCACGTCACCGATGCGCCCAGCGGTCGCTCGCTCTTCCTGTTTTGCTC
TCGCACCTTACCTTTCGGTTCCCATCGGTGTTCATGTTGTGGTCAGTCGTC----------------TGACGACGATTTA
TTTTGGTTTGGTGCTGCAGGTGATGGGGGGGGGGTCCAAGAGGAAGGAGGAGTACATTTCCTTCCCAGAGCACCTTTGCA
CCTGATACTCCTTCTTCTATGACATCGTTGGCCGCGATGAGCAGCTC
>SNPs
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----------------------------------------------------------------------------S---
----------------------------S---------------------------------------------------
-------S-------S----------------------------S--S--------------------------------
-------------SS-----------------------------------------------------------------
----------------------------------------------------S--------------------------S
-------------------------------------------SS----S----------------------------S-
S-S-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------SSSSS-SS----------------------
--------------------------------------S------S----S------SSSSSS-----------------
------------S---------S---------------------------------------------------------
----------S---------------------------------------------------------------------
-----------------------------------------------------S--------------------------
------------------------------------------------------------------------S-SS----
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--------S----------S------------------------------------------------------------
------------------------------------------------------------------------S-------
--S-----------------------------------------------------------------------------
--------------------------------------S---SS------------------------------------
----------------------------------------------------S---------------------------
------------------------S----------------S----------------SS-------SSS----------
-----S-----------------SSSSS-S-S-------------SS--------------S---------------S--
-S-----------------S-SSSSSSSSSSSS-------S------S--SS-----S----------------------
--------------------------S----S--S--------S-------S----------------------------
---S-------------------------------------------S-------------S------------S-----
------------------------------------------------------------------------S-------
---------------------------S----------------------------------------------------
--------------------------S-----------------------------------------------------
-----S----------S---------------------------------------------------------------
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----------------------------------S------------
>forward_453
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--------------------------------CCGCTAACCTCCGATTCTTCA---------------------------
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>reverse_1483
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------------------------------------------TTCATGCTTGGATCGTGGCT------------------
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