>input_sequence_85747
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATGGCGTCCTCTCTGAAGATGGCCGC
CGCCATCGCTGTTTGCGTCATGCTCGTCCTGAACATGGGCCACCCGGTGGCAGCCACAGAATGCGAAAATTGTCTGGGCC
ATTGTGTCGCCATTTGCATCGCCTACGCTGAAACATCGTGCAGTGGCATCTGCAATGCCGCACCTCCACGTCCTGCATGC
CAGACATGCAAGAACGCGGCCTTAATTCAGTGCGGTGGCACATGTTATGGTGGTTGTACCCTCTTCTGCTAG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr1A_1_TraesCS1A01G010000
AAAATATTTGAGCGATACGGATCAGTGATAGCTAGCTGGTTCTCTATTTCAGGCCCGTACCGGACACATGTACAGCATGT
TCAACTGCACA-GGCCCTCAAGTGACCAGGG--------------CCCCAATTTTTT-CTGTACACTA---TTTTTTCTG
GACATTTATGCAAATATGCTTCTTAATTAATGACCAATCAATGCATTTTTAAATAC--GGAGTACTACTAGTATTCTTTG
GGAACATGCACGGTAATACTAGCTCCCAGTACTC-----CATCTCACGCACGCCT-------------CTCCTCCTTCCT
ATTCTCTTTCCCCGTAGTCTCTTTCACATCCAGCCACCCATGCAAATCCTTTGCTCCATCGCACGGCTCCTAGCTTAATT
CCTTCGCGGTTTCTCCGAAATTAACA-----TATATTTACGCTCCACCCTCAATCCAACATCTATTTATTAGGTGTCTCC
TC---TGCTTATTAGACTTTGGTGCTGCTTCTACCCACGCTGCCTGACTAGAGCTTTAACAAGACTACCAGAACTCAT-A
AA-AAAAAG---------------TTTGTTTATATGTTCTATTTCTAACACATCATATACTAATC---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATTCGATCT-AAAAAA
TGTGCTCTTGATATGC-TTTAGCAAAATAATCAAATGGCATTTTGGAGAAGATTGCT---TAT--GAAAAACAAAATGAA
GATTTTGTATCAAGGACTGCTAGAAGGATGCATGTTTATGCTAAATAATGTACTAAT----------------------T
TGAGTATAAATTTTTGTTTTCC-TAATTTCCAATGGTTATATCAAGGGCTTAATTTTGGATGTTGAACAGGGT-CCCGTT
TTCTCGGGTACGGCCCTGCTCTATTTTATGCGAGCTGGAGGTGGAGTAAGAGCTAGCTAGTAGTGAGTGGTCCTCACGTT
GGCTGCCTATAAATAGCATCCTACTCCATCCTATGGGAATGTACCAGTTCATAAGCAGATAGCTAGCTCATCTCCATCCA
TTGCATCTTTTCTTCCTCAATCCTCCACTACAACCACCCACCCAACATTCATCAATGGCGTCCTCTCTGAAGATGGCCGC
CGCCATCGCTGTTTGCGTCATGCTCGTCCTGAACATGGGCCACCCGGTGGCAGCCACAGAATGCGAAAATTGTCTGGGCC
ATTGTGTCGCCATTTGCATCGCCTACGCTGAAACATCGTGCAGTGGCATCTGCAATGCCGCACCTCCACGTCCTGCATGC
CAGACATGCAAGAACGCGGCCTTAATTCAGTGCGGTGGCACATGTTATGGTGGTTGTACCCTCTTCTGCTAGCTAAACCG
-----------------GCGGGCTGTAAGCTGCGTGTGTGAATGTTCCTTCGTTTTATTGTTCGTTGATATCTCTGGCGT
TGTTTCTAAGCCAA-GTACTAAATAAGCAAACGAATGTCGTTCCATTGCTGTGTGG----GTACTAT-GGCAAATGTT--
---------------------TCATTTGAACCATCATCTT-------TCAATATACATGTGTGCAAGTGGCGTGTGCTTT
GTGCTTTTTTGTATATATCATGTGTTCGTCCGA-CGGCACGTCGTCATACTTAACAATAGGGATACATGCATCTTTATCT
CGACAACACTTGAAAAT--ATATAGTTCCGATTCCCTCACGGTAGGGTTTCACATCTATATGTCGGTGAGTTGCAGCATT
GCAGAACGAGACTGGATGGCAGCGTTGGAGCACGAACCCAGCCAGGTCATTAGACATGGAGGTGGC----------GCGG
CGGCGCTCGAGGGGCAGCGGACGGGGTGCTTAGGGGATCACTGACTGAGGTGTCTTTTTTTCCACGTGCAAAGTGGGCCT
CGTGTTCGGCAACTGGACGTGGGTTTGAGGGCCTAGCTAATTAAAATTACTAGTATATGCCCTTAACCTGAAATAATGCT
AGTTGCTTTGGTT------------AAAAAATTTCTGGGAAAGCACTGAAGCACAGCTCGGGCTAAATCAATACACTTCG
CAGGACATTTCTACAAAGTCTGAATTTTATTCACTAAAAATAAAGCATCACAGGGATAGAAACACAATGAGTACACATAC
CCGGCCGCCGCATAGCTAGGATGGACACAGCCAACATCAACGACGCGCGCACACACACACACACAAAACACCAACAACTA
GCAAAGTCAAACAAGACCGAAGCTATGCCATGGTGGACTGAAAAGAAGAAA---AAAACTCCAAAGCGGTCAAAACAATG
ATCAACAAGCTATGACAATGCCAATATCCGCACCAACCATCTCTTGACATCACAAGTATCATGAGAAGGGTTCTTCAACA
ACAACGCCTTCAGAAAAGAAACGACGAAAAAAA
>chr3B_46
ATTC---------------------------------------------CAGGCCCGTAACGGACACATGTGCAGCATGT
TCGACTGCACAGGGCCCCCAAGTGACCAGGGGCCGTGACCAGGGGCCCCAGTTTTTC-ATGTACACTA---TTTTTTTTG
AACACTTTGGGCAATT---------ATGAATGACCAACCAATGCATTTTTGATTATATGGAGTACTACTAGTATTCCTTG
GGAACATGCACTGTAATA---ACTCCCGGCACTC-----CATCTCACGTACGCCT-------------CTCCTCCTTCCT
ATTCC---------------CTTTCACTTCCAGCGACCCATGCAAATCCCTTTCTAT--------GCTCATAGCCTAATT
CCTTCGCAGTTTCTCTAAAAGAAACCCAATGTATAGGTACACTCCACCCTCAATCCAACATCTATTTATCACGTGT---C
TCCATTGCTTCTTAGATTTTGTTGCTGCTTC------------------------------AGACTACCAGAACTCTTAA
ACCAAA--GTTCGCTTAATTCCCTTTTGTTTACATGTTCTATTTCTAACACATCATATACTGAGC---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATTCGATCT-AAAAAG
TATGCTCTTGATAAGTTTTTAGCAAAATAATCAAATGGCCTTTTG-----------------T--GAAAAACAAATCGAA
GATTTTGTATCAAGGACTGCTAGAAGGATGCATGTTTATGCTAAATAATGTACTAATTTTGAGTTTTGAGAATTGATTGT
TGAGTATAAATTTTTGTTTTCC-TAATTGCCAATGGTTAT--TAAGGGCCTAATTTTGGATGTTGAACAGGGCCCCCATT
TTCTCGGGTACGGCCCTGGTCAATT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr7B_49
------------------------------------------------TCAGGCCCGTATGGGACACATGTGCAGCATGT
TCAACTGCACAGGGCCCCCAAGTGACCAGGGGCC-------------CCAATTTTTT-CTATGCACTATTTTTTTTTTTG
AACACCTATGCAAATATGCTTCTTACTTAATGACCAATCAATGCATTTTTTAATAC--AGAGTACTACTGGTATTCCTTG
GGAACATGCACGGTAATA---GCTCCCAGTACTC-----CATCTCACGCACGTCT-------------CTCCTCCTTCCT
ATTCTCTTTCTCTGTGGTCTCTTTCACTTCCAGCTACCCATGCAAATCCCTTGCTCCATAGCATGGCTCCTAGCTTAATT
CCTTTGCGGTTTCTCTGAAATGAACA-----TCTATTTATGCTCCACCCTCAATCCAACATCTATTTATTATGTGTTTCC
TC---TGCTTATTAGATTTTGTTGCTACTTCTACCTACGCTGCCCGACTAGAGCTTTAACAAGACTACCAGAACTCATAA
AA-AAAAAG---------------TTCATTTATATGTTTTATTTCTAACACATCATATACTAATCGAAACTAATCTACAC
ACGACTGTTGAGAGACGATTCTTGGACGATGTCTTCTTTGAATGGTGTGGATTTGTAGAATAATGCCATCTAATGGGTGC
TTTTGTCCATCGTGCATAAATCGTGCAGATAGTATCATCTGTCTAGCACTGCTCTATACTAATCATTCGATCT-AAAAAA
TGTGCTCTTGATATGTTTTTAGCAAAATAATCAAATGGCATTTTGGAGAAGATTGCT---TAT--GAAAAACAAATTGAA
GATTTTGTATCAAGGACTGCTAGAAGGATGCATTTTTATGCTAAATAATGTACTAATTTTGAGTTTTCAAAAT------T
TGAGTATAATTTTTTGTTTTCC-TAATTGCCAATGATTATATCAAGGGCCTAATTTTGGATGTTGAACAGGGCCCCCGTT
TTCTCGGGTACGGCCCTGTCTA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr7B_50
-------------------------------------------------CAGGCCCGTACCGGACACATGTGCAGCATGT
TCAACAGCACAGGGCCCCCAAGTGACCAGGGGCC-------------CCAATTTTTT-CTGTACACTA---TTTTTTCTG
AACACTTATGCAAATATGCTTCTTAATTAATGACCAATCAATGCATTTTTTAATAC--GAAGTACTACTAGTATTCCTTG
GGAACATGCACGGTAATACTAGCTCCCAGTACTC-----CATCTCACGCACGCCT-------------CTCCTCCTTCCT
ATTCTCTTTCTCCGTAGTCTCTTTCACTTCCAGCGACACATGCACATCCTTTGCTCCATCGCACGGCTCCTAGCTTAATT
CCTTTGCGGTTTCTCCGAAATAAACA-----TCTATTTACGCTCTACCCTCAATCCAATATCTATTTATTAGGTGT---C
TC---TGCTTATTAGATTTTGTTGCTGCTTCTACCTACGCTGCCCGACTAGAGCTTTAACAAGACTACCAGAACTCATAA
AA-AGA--GTTTGCTTA-------------TATATGTTCTATTTCTAACACATCATATACTAATC---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATTCAATCT--AAAAA
TGTGTTCTTGATATGTTTTTAGCAAAATAATCAAGTGGCATTTTGGAGAAGATTGCT---TAT--GAAAAACAAATTGAA
GATTTTCTATCAAGG-CTGCTAGAAGGATGCATGTTTACG------------CTAATTTTGAGTTTTGAGAAT------T
TGAGTATAATTTTTTTTTCCTAATAATTGCCAATGGTTATATCAAGGGCTTAATTTTGGATGTTGAACAGGGCCCCCGTT
TTCTCGGGTACGGCCCTGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr1D_50
-------------------------------------------------CAGGCCCGTACCGGACACATGTGCAGCATGT
TCAACTGCACAGGGCCCCCAAGTGACCAGGGGCC-------------CCAATTTTTTTCTGTACACTA---TTTTTTCTC
AACATTTATGCAAATATGCTTCTTAATTAATGACCAATCAATGCATTTTTTAATAC--GGAGTACTACTAGTATTCCTTG
GGAACATGCACGGTAATACTAGCTCCCAGTACTC-----CATCTCACGCAAATCCTTTCCTGCCTCTCCTGCTTCTTCCT
ATTCTCTTTCTCTGTAGTCTCTTTCACTTCCAGCGACCCATGCAAATCCTTTGCTCCATCACACGGCTCCTAGCTTAATT
CCTTCGCGGTTTCTCCGAAAAAAACA-----TCTATTTACGCTCCACCCTCAATCCAACATCTATTTATTATGTGT---C
TCCTCTGCTTATTAGATTTTGTTGCTGCTTCTACCTACGCTGCCCAACTAGAGCTTTAACAAAACTACCAGAACTCATAA
AA-AAA--G---------------TTTGTTTATATGTTCTATTTCTAACACATCATATACTAATC---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATTCGATCTAAAAAAA
TGTGCTCTTGATATGTTTTTAACAAAATAATCAAATGGCATTTTGGAGAAGATTGCT---TAT--GAAAAACAAATTGAA
GATTTTGTCTCAAGGACTGCTGGAAGGATGCATGTTTATGCTAAATAATGTACTAATTTTGAGTTTTGAGAATTTGAGTA
CT---------------------------CCAACGGTTATATCAAGGGCTTAATTTTGGATGTTGAACAGGGCCCCCGTT
TTCTCGGGTACGACCCTGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr6B_50
-------------------------------------------------CAGGCCCGTACCGGACACATGTGCAGCATGT
TCGACTGCACAGGGCCCCCAAGTGACCAG--CCC-------------CCAGTTTTTC-ATGTACACTA---TTTTTTTTG
AACACCTTGGGCAAAT---------ATGAATGACCAACCAATGCATTTTTGACTATATGGAGTACTACTAGTATTCCTTG
GGAACATGCACGGTAATA---ACTCCCGGCACTC-----CATCTCACGCACGCCT-------------CTCCTCCTTCCT
ATT--------------TCTCTTTCACTTCCAGCGACCCATGCAAATCCCTTGCTAC--------GCTAATAGCTTAATT
CCTTCGCAGTTTCTCCAAAAGAAACCCAATGTATAGGTACA--CCACCCTCAATCCAACATCTATTTATCACGTGT---C
TCCTTTGCTTCTTAGATTTCGTTGCTGCTTC------------------------------AGACTACCAGAACTCTTAA
ACTAAA--GTTCGCTTAATTCCCTTTTGTTTACATGTTCTATTTCTAACACATCATATACTGAGC---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATTCGATCT-AAAAAA
TATGCTCTTGATAAGTTTTTAGCAAAATAATCAAATGGCATTTTGTGGAAGATTGCT---TATATGAAAAACAAATCAAA
GATTTTGTATCAACGACTGCTAGAAGGATGCATGTTTATGCTAAATAATGTACTAATTTTGAGTTTTGAGAATTGCTTGT
TGAGTATAAATTTTTGTTTTCC-TAATTGCCAATGGTTAT--TAAGGGCCAAATTTTGGATGTTGAACAGGGCCCCCATT
TTCTCGGGTACG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr6B_50
-------------------------------------------------CAGGTCCGTACCGGACACATGTGCAGCATGT
TCGACTGCACAGGGCCCCCAAGTGACCAGGGCCC-------------CGAGTTTTTC-ATGTACACTA---TTTTTTTTA
AACACCTTGGGCAAAT---------ATGAATGACCAACCAATTCATTTTT---------GACTACTACTGGTATTCCTTG
GGAACATGCACTGTAATA---AATCCCGGCACTC-----CATCTCACGCACGCCT-------------CTCCTCCTTTCT
ATTCTCTTTA---------------ACTTCCAGCGACCCATGCAAACCCCTTGCTAC--------GCTCATAGCTTAATT
CCTTCACAGTTTCTCCAAAAGAAACCCAATGTATAGGTACACTCCACCCTCAATCCAACATCTATTTCTCACGTGT---C
TCCTTTGCTTCTTAGGTTTTGTTGCTGCTTC------------------------------AGACTACCAGAACTCTTAA
ACCAAA--CTTCGCTTAATTCCCTTTTATTTACATGTTCTATTTCTAACACATCATATACTGAGC---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATTCGATCT-AAAAAA
TATGCTTTTGATAAGTTTTTAGCAAAATAATCAAATGGCATTTTGTGGAAGATTTGCTTATAT--GAAAAACAAATCGAA
GATTTTGTATCAAGGACTGCTAGAAGGATGCATGTTTATGCTAAATAATGTACTAATTTTGAGTTTTGAGAATTGCTTGT
TGAGTATAAATTTTTGTTTTCC-TAATTGCCAATGGTTATATTAAGGGCCTAATTTTGGATGTTGAACAGGGCCCCTGTT
TTCTCGGGTACGGCCCTGCT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr3D_203
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ACTAATAGTACTCATTG
GGAACATGCACCGTAGTA---ACTCT-AGTACTCCATCTCATCTCACGCACGCCT-------------CTCCTCCTTCAT
A-T--------------TCTCTTTCAATTACAGCGACCCATGCAAATCCCTTGTTCCATCGCAGGGCTTCTAGCTTAATT
CCTGCACGGTTTCTCCGAAATAAACCCATTGTTTAGGTACGCTCTACCCTCAATCCAAGATCTCTTTATCAAGTGT---C
TTCTCCGCTTCTTATATTTTGTTGCTGCTTCTACCTACGCTGCCCGACTAGAGCTTTAACCAGACTACCAGAACACATAA
AA-AAA--TTCCATTTCATTCCCTTCTATTTATATGTTCTATTTCTAACACATCATATACTAATC---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATTCAATCT-AATATA
TGTGCTCTTGATAAGTTTTTAGCAAAATAATCAAATGGCATTTTGGAGAAGATTGCT---TAT--GAAAAATAAATTGAA
GATTTTGTATCAAGGACTGCTAGAAGGATGCATGTTTATGCTAAATAATGTACTAATTTTGAGTTTTGAGAATCACTTCT
TGAGTATAAATTTTTGTTTTCC-TAATTGCCAATGATTATATCAAGGGCCTAATTTTGGTTGTTGAATAGGGCCCCCATT
TTCTCGGGTACGGCACTG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr1A_805
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTCTATTTTATGCGAGCTGGAGGTGGAGTAAGAGCTAGCTAGTAGTGAGTGGTCCTCGCGTT
GGCTGCCTATAAATAGCATCCTACTCTATTCTATGGGAATGTACCAGTTCATAAGCAGCTAGCTAGCTCATCTCCATCCA
TTGCATCTCTTCTTCCTCAATCCTCCACTACAACCACCCACCCAACATTCATCAATGACGTCTTCTCTGAAGATGGCCGC
CACCATCGCCGTTTGCGTTATGCTCGTCCTGAACATGGGCCACCCGGCGGCAGCCACAAAATGCGAAAATTGCCTGGACG
ATTGTGTTGCCATTTGCATCGCCTACGCTGAAACATCATGCAGTGGCATCTGCAACGCCGCACCTCCACGTCCTGCATGC
TAGGCATGCAAGAACGCGGCCTTAATTCAGTGTGGTGGCACATGCTACGGCGGTTGTACCCTCTTCTGCTAGCTAAACCG
-----------------GCCGGCTGTATGCTGCGTGTGTGAATTTTCCATTTTTTTATTGTTTGTTGATACCTCCAGCGT
TGTTTCTAAGCTAT-GTACTAAATAAGCGAACAAATGTCGTTCCGTTGTTGTGTGG----GTACTATTGGCAATAGTTCC
TTGGTTTTTTACTGTTCCCCTTCATTTCAACCATCATCTTACAATAATCAATATACAGGCGTGCAAGTGGCGTGTGCTTT
GTGCCTTTTTGTATATATAATGTGTTTGTCCAAGCGTCACGTCGTCATACTTAACAATAGAGATACA-------------
-----ACCCTTGAAAATACATATTGTTTCGATTCCCTGACAGTAGGGTTTCACATCTCTATGGCGGTGAGTTGCAGCCTT
GCAGGACGAGACTGGACAGCGTCGTTGGAGCACAAATCCAGCCACGGCATTAGACATGGAGGATGGAGCTCGCGCGGCGG
CGGTGCTGGAGGGGCAATGGACGGGGTGCTCAGGGGATCACTGACTGAGGTGTGTTTCTTTCCAGGTGCAGAGTGGGCCT
CACGTTAGGAAACTGGACATGGGTTCGAGGGCCTAGCTAATGAAAATTAGC---ATATGCCCTTAACGTGTAATGTTGTT
AGTTGCTTTGGGAGTATTCGTGCTAAAAAAAA-TCTGTGAAAGCATGGAAGCACAACTTGAGCTAAGTAAATACACTTCG
CTGG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr1A_860
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TCACGTT
GGCTGCCTATAAATAGCATCCTGCTCAATCATATGGGAATGTACCAGTTAAAAAGCAGCTAACTAGCTCACCTCCATCCA
TTGCATCTTTTCTTCCTTAATCCTCCACTAGAACCACCCACCCAACATTCATCAATGGCTTCATCTCTTAAGGCGGCCGC
CGCTGTCGCCGTTTGTGTCATGCTCGTCCTGAACCTGGGCCACCCGGCGGCAGCCACAGAATGTGACAATTGTCTGGGTG
ATTGTGTTCCCATTTGCGTCGCCTTCGCTCAAACGTCATGCAGTGGCATATGCAACGCTACACCTCCATCTCCTGCATGC
CAGACATGCAAGAATGCAGCCTTAATTGAGTGCGGTGCAACATGCTACGGCGGTTGTACCCTCTTCTGCTAGGTGAACCG
GCCGGCTGTGCCCTACCGCCGGCTGTATGCTGCGTGTGTGAATGTTCCTCCGCTTTGTTCTTTGTTGATACCTCCCGCGT
CGTTTTTAAGCCAT-GCACTAAATAAGCGAACGAATGTCGTTCCGTTGTTGTGTGG----GTACTAT-GGCAAATGTT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr1A_873
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CTATAAATAGCATCCTCCTCCATCCTATGGAAATGTACCAGTTCATAAGCAGCTAGATAGATCATCTCCATCCA
TTGCATCTTTTCTTCCTCAATCCTCCACTACAACCACCCACCCCACATTCATCAATGGCGTCCTCTCTGAAGATGGCCGC
CGCCATCGCCGTTTGCGTCATGCTCGTCCTGAACATGGGCCACCCGGCGGCAGCCACAAAATGCGAAAATTGTCTGGGCG
ATTGTGTTGCCATTTGCATCGCCTACGCCGAAACATCGTGCGGTGGCATCTGCAACACCTCACCTCCACGTCCTGCATGC
CAGACATGCAAGAACGCGGCCTTAATTCAGTGTGGTGGTACATGCTATGGCGGTTGTACCCTCTTCTGCTAGCTAAACCG
-----------------GCTGGCTGTAAGCTGCGTGTGTGAATGTTCCTTTGTTTTATTGTTTGTTAATACCTCCGGCGT
TGTTTCTAAGCCATCGTACTAAATAAGCGAAGGCATGTCACTCCTTTGCTGTGTGGGTACGTACTAT-CGCAAATGTTCG
CTGG-TTTTTATTGTTCCCCTTCAAGTCAACCATCATCTT-------TCAATATACATGTGTGCAAGTGGTGTGTGCTTT
GTGCTTTTTTGTATATATCATGTGTTTGTCCGAA-GTCATATCGTCATACTTAAGAATAGGGATACATGCGTCTTTCTCT
CGACAACACTTGAAAATACATATTGTTTCGATTCCCTGACAGTAGGGTTTCACATCTCTATGGCGGTGAGTTGCAGCCTT
GCAGGACGAGACTGGACAGCGTCGTTGGAGCACAAATCCAGCCACGGCATTAGACATGGAGGATGGAGCTCGCGCGGCGG
CGGTGCTGGAGGGGCAATGGACGGGGTGCTCAGGGGATCACTGACTGAGGTGTGTTTCTTTCCAGGTGCAGAGTGGGCCT
CACGTTAGGAAACTGGACATGGGTTCGAGGGCCTAGCTAATGAAAATTAGC---ATATGCCCTTAACGTGTAATGTTGTT
AGTTGCTTTGGGAGTATTCGTGCTAAAAAAAA-TCTGTGAAAGCATGGAAGCACAACTTGAGCTAAGTAAATACACTTCG
CTGG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr1A_884
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATCCTGCTCCATCCTATGGGAATGTACCAATTCATAAGCACCAAGCTAGCTCATCTCCATCCA
TTGCATCTTTTCTTCCTCAATCCTC------AACCACCCACCCAACATTCATCAATGGCGTCCTCTCCGAAGATGGCCGC
CACCATCGCCGTTTGCGTCATGCTCGTCCTGAACACGGGCCACCCGGCGGCAGCCACAGAATGCGAAAATTGCCTGGGCG
ATTGTGTTGCCATTTGCATCGCCTATGCTGAAACATCATGCAGTGGCATCTGCAACGCCACACCTCCACGTCCTGCATGC
CAGGCATGCAAGAACGCGGCCTTAATTCAGTGCGGTGGCACATGCTACGGCGGTTGTACCCTCTTTTGTTAGCTAAGCCG
-----------------GCCGGCTGTAAGCTGCGTATGTGAATGTTCCTTCGTTTTATTGTTTGTTGATACCTCCGGCGT
TGTTTCTAAGCCAT-GTACTAAATAAGCGAACGAATGTCGTTCCATTGTTGTGTGG----GTACGAT-GGCAAATGTTCC
TTGG-TTTTCATTGGTCCC-TTCATTTCAACCATCATCTT-------TCAATATACATGTGTGCAAGTGGCGTGTGCATT
TTCCTTCTTTGCATATATCAAGTGTTTTTCCGA-TGTCACGCCGTCATACTTAACAATAGGGATACATGCATCTTTGTCT
CGACGACTCGTGAAAAG--AAATAGTTTCGATTCCCTCACGGTAGGGTTTCACATC-CTATGGCGGTGAGTTGCAGCCTT
GCAGAACGAGATTGGACGGCGGCGTTGGGCCAAAAATCCAGCGAAGGCATTAGACATGGAGCTCGTGT----------GG
CGGCGCTCAAGGGGCAACGGACGGGGTGCTTAG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr1A_1709
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CTTAGGGGATCATTGACTGAGGTGTCTTTCTTTCCAGCTGCGAAGTGGGCCT
TATGTTCGGCAGCCGGACATGCGTTCGAGGGCCTAGGTAATGAAAATTACTAGTATATGCCCTTAACGTGAAATGATGTT
AGTTGATTTGGTT------------AAAAAAA-ACTGGGAAACCATCGAAGCACAGCTCGAGCTAAATCGATACATTTTC
T-GGACATTTCGACAAACTCTGAATTATATTCACTAAATATGAAGCATCAAAGGGATACAAACAAAATTAGCACACACAC
TCAGCCTCTGCATAGCTGGGATGGACACAGCCAATACCAATGTG-------------CACACACAAAACACCAACAACTA
GCAAAGTCAAAAAAGACTGAAGCTATGACATGGTCAACTTAAAAGAAGAAACGAAAAACTCCGAAGCGATCAAAACAATG
ATCAACAAGCTATGACAACACCTATATCCGCACCAACCAAGTCTTGACATCACAAGTATCACCAGAAGGGTTCTTAAACA
ACAACGCCTTCA-AAAAGAAACAACGCAAATAA
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S--------
-----------------S--------------------------------------------------------------
S-------------------------------------------------S-------------------------S---
--------------------------------------------------------------------------------
----------S----------------S------S---------------------------------------------
---------------------S------------------------------------------------------S---
----------------S----S-------------S--------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----------------------------------------------------------S----
--------------------------------------------------------------------------------
----------------------------S-------------------------------------------S-------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
---------S-------------------------------------S-------------------------------S
-------S-----------------------------------------------S------------------------
--------------------------------------------S-----S-----------------------------
-------------------S------------------------------------------S-------S---S-----
-------------S--------------S---------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------S---------S---------------------------------------S---
---------------------------S-----------------------------S----S--------------S--
----------------S---S------------S--S-------S-S----------------S-S--------------
----------------S----------------------------------------S------S---------------
-S----------------S------S---------------S-------------------------S------S---S-
-------------------------------SS------------SS-------------S-------------------
-S---------S-----S--------S-----------S--S--------S-------S-----S---S--S-----S--
S-S---S-S--------S----------------S-S---S-SSSSSSSSSSSSSSS-----------------------
-----------S-----S---------S------SS---S----------------------S-----S-----------
------------------SS--S----------------SS--------------------SS------------S----
------------S---------S---S---S--
>forward_516
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CTTTGGTGCTGCTTCTACCC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>reverse_2368
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGCACACACACACACACAAA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
