>input_sequence_85722
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---------------------------------------------ATGGAGGGAACCATGAAGAGTGGCGCCAGGGGGGT
CAAGGGGAAGGTGGCGATGGTGTACTCCAAGTACGCCGGCAAGGCCCAGGCCAAG--------CCTGCCCCGAGCGTC--
-ACTGCCGCACACGCCTACCAGCCC-----------------AGGTACCCTTCTGCCATTGACGCGACGGCGAGCGCCGC
CTATGCCGCCACCGGTGACGTCGACGAGAGGGCCACGGCCTTCATACTGTCCGTCCGAGAGCGCTTCAAGAACGAGCAGA
AGATGGTGATTTAG------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr3D_1_TraesCS3D01G426000
TAATTAATAAAATGGCCGTATGCATCGCCTAGATACAGTGGCCAGGGTCCTCCTCCTTTTCTAAAAATCGCCACCGACTG
CAAGCATGCGCTTTCTGCTGCTAGTGTCCGTCAGTGTAGCTCGTCGTCG-----GCTCCAGGAAACCTCTACTGGATGTT
CTTGTTTCCTTATACATGAGTCGTGTACGTGCAAACTGGCGGGTGCTAGCTAGCTGCTGCATCCATGGATAGATTGATGT
ATTGATGCCACTGCTAGAAAAATAAAATGTCTGGACAGTACGTGGAAAAGATAG--------------------------
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--------------------------------------------------------CAGCTAGAGGCCAGGTGATCAGAC
TCTTCCGACTGATTTATATTTTTTCTGTAAGAACTCCTCGTGCTCAGAGTGTGCCTTCATCTGGGCACTGGAAAACTAGT
ACTCGTT-----------------------------ATTAACCGGACAACCGTAATTAGCATCAGGTTCAGGATGGTACA
AGGCTCGTGCATACTCGTCAAA---CAGCATCTAGAGCTTTGCTTCGTGTAAACGATTGGACAGATACATGTACAAGAAC
TACAGGACGAGTTCGAGTTGATGTATGATTCACAAAGGATAGAGAGGAATCAAGAATCTGACGAGGATAACATTTGGATA
TCCCAAGGTTTGATATTTTTTTCTAATCTGGAAAAGGCCAGTGGGACGGACCGAACCTTGGCAGGCATGCGTATATGGGT
TTTATCACAAGACCGACCGTATATTATCTTGGCAATCATGCAGCTCATCGTGTCACTTACCGCTGGCCCCTT-CGAAGCA
TGGGAATCTCCGGTCAGTGACACCTTCCAGATTCACTTTCCCACGACTACATTTCGTATGGTGCAC--------------
-----GCATCTAAGGGCCAAGATGGGACATGGAATGTTTATG--ATCTATC-CTATGTCA--CACACCAACCAGTATAAA
AGGGC-AAGCTACCTCTTCGT---------CATTCCAGCATCGGAAAGCAAAGGCACACACAGCACAAGTGCACAACCAC
AAAGCTTAGGTAGAATCAAACACG-----------GTGAAACCAAATGGAGGGAACCATGAAGAGTGGCGCCAGGGGGGT
CAAGGGGAAGGTGGCGATGGTGTACTCCAAGTACGCCGGCAAGGCCCAGGCCAAG--------CCTGCCCCGAGCGTC--
-ACTGCCGCACACGCCTACCAGCCC-----------------AGGTACCCTTCTGCCATTGACGCGACGGCGAGCGCCGC
CTATGCCGCCACCGGTGACGTCGACGAGAGGGCCACGGCCTTCATACTGTCCGTCCGAGAGCGCTTCAAGAACGAGCAGA
AGATGGTGATTTAGCTGAGCTCGGTTGAGGTCGGCCGGCCGGTTGG-----TCCAGGCTACAGGAGAGATTTTATATTTA
AAATGG-AACATCTTCGTGGTAGCCATGGATACATAGT-------TGTGTCTA----GGT------GGTACACCATGTAC
CTTTTCTTT--TCTTTTCTCT-C-T--TTTGTGGACTTCAGTTTGACCATAAGAGTGG-AAGAAAGGGGTGAT-------
--------AATATAAATCCCATTTCTGAGAC----C--------ATGTGA--TTATGATCCTCAATCAGAATGGAGTTTG
TGTCATCTCCACTGTTCATTCTTGTTC--GTCCAACACTCCATCTCGTCG--GTGTAAAGAAATTTAAAATTGCAG-TTC
-CTTTTATGATGTTGGGAACCTCTTTACAAGTGCCGTTTTCCGCCGGCGTTAATCTTTGGCACGCCCGCCTCAGTCATCC
CAGCTCCACCGCTCTTTGTCAAATAGTGAGGGATTTTTCTT-TTTC-ATGTAATAAAACGGATGCTCACTCTTGCCAAGC
ATGTCGTATGGGCAAACATGTTAGACTTCCTTTTAGTTTTTCATCCACAGTGGCGTCTTATCCTTTCGAATTAATTCATA
GTGATGTATGGACATCGCCTATACCTAATAATTCTGGGT-TTTTATATTGTCTTGTCATTCTGGATGATTACTCTCACTT
TGTGTTGACTTTTCCGCTTCGTAGGAAATCAGATGTTCCCGCCACACTCATTGCATTCTACTCCTACGTGTCTACTCAGT
TTGGCCATCCTATACATGCTCTTCAGACTGACAATGCATGGGAAAAAATTCGATAGCATCACCATCCGCACCCTTCTCTC
CAACCACGGTACAATTTTCCGCCTCATCTGTCCATACATCTCACAACAAAACGGTAAAGCTGAACGTGTTCTTCGTACTT
TTAACGACTGTGTTCACACCCTTCTTTTCCATGCTTACATACCACCTCGGTTTTGGCCTGATGTCCTCGCCATAGCCACC
CTTCTCATTAACCTTCGCCCTTGCCGTGCCCGTTGGAATTAC
>chr3B_67
ATCGTCG------------------------------------------------------------------CCGACTG
CAAACATCAACTTTCTGCTGCTAGTGGCCGTCAGTGTCTGGAGCTCTATCGTCAGCTCCAGGAAACCTCTACTGGATGTT
CTTGTTTCCTTATACATGAGTCGTGTACGTGCAAACTGGCGGGTGCTAGCTAGCTGCTGCATCCATGGATAGATTGATGT
ATTGATGCCACTGCTAGAAAAATAAAATGTCTGGACACTACGTGGAAAAGATAGCAGCCAGAGGCCAGTTTTTTTTTAGA
AAAAGAGGATGACCCCCGGCCTCTGCATCTGGGCGATGCATACGGCCACTTTATTAATTATTCTCACAACACCATACAAA
GCCATATAACAGCAAGACTAAAGCCACCGTCTAAGCAACAACTATCACTACACCTATCCAATTGATAAAAGGGCGCAGAT
AGTCTGGGCCTAATACCAAACAAACATCGCAGCCAATCCTAAACATCTAAGACCTGAGATCCCAACCAGGTCGCCTGCCG
GGTATGGGGCACCTACCAGTCCGGCGCACTCCTCAACCAGGACGCCTATCGGGTATGAGGCCGCCGCAGCCACCTGCCAT
CAATCCATCTTCAGAGCTGTACTGTTTACATGTATCGTGCCAGGTCTCTCTGCCATCGACGCCACCATGACGCCCGACAG
CATCGTCCTCCTGCGCGAGTCCATCCTCCCACATCGAACTCCGAATTTGCACTGCGACATGCCGTCAAGATCCGTCGCCA
TCAATGTGTAGGATGAAGCACCACTCCATCAAAGAATTCGTTCTTTGGTCCCTCGATCACGTGTGTACCTCCAAGAATGA
CGCCCCCAAGGGAGGAACGACACCAGAGCGCCGCCGTCATCCGATCTGGGGTCTCCCCCGGAGGTAGCAGAGAGTGGCCT
TGAACTTTTCCACGGCGATGCCTTCAAGAAGGGAACGACGCAGATAGCGCCGCCACCGCCTGCCTTAGTAGGAGCCGAAG
GCAAGTTTTCACCCAGATCAGTTCGAAGGGATCCAACTCTCGTGCCCGGGCCGCCGTCACCACCAACACCACCAGGCAGC
CCTGGAGTACCGGCATATCAGCGAGCCGCCGGCACCACCGCATCCAGATCGCCGGCCACGTCGGGCCGCCGCCGTCCCCT
GTGACGTCCGGGTCAGAGACGGAGCCGCCGACCGCGCACAGGGACCGCCGCCGCCTGCAGACGCCGGAGCTCCGCCGAGA
GCCCAGTGCCCGCCACCGCTTGCTGAAGCCAACTGCCCGAGCACTAGCGCCACCGTGGAGCCATCAGATCGGGGAGGAAG
ACGCGCGCCGACCACCCTCGCGGACCCCGCCACACGCCCGAGCGCCGGCGCCACCGCGGCACCATCAGATCAGGATGAGG
AGGAGCCCGCGCGCAGACCACGCCGCCACCAGCGCCGCAACGCCACCAAGCAGGGGAGCCCCGCCCAGATCCGCCGGCGG
CCAGACCTGCTGCAAAGCCGAGCGCCGCCGCGGGGGCTGGCGGGAAAGGGGAGTGGCGGCGGCGATCTAGGGTTCCGCCC
GGGCCGCTCGCGGGAGCGGCACAGGGGACGAGGGCTTAAAAATGGGGGAGAATTTCACTTCCCCAGCCTCTACACCAACT
AGGGATGCATACGACCATTTTAGTATAGGTACCAAGATAAACATGGTCCTCGGAATTTTTTTAAATGCGTATCAAGATAT
TTTTTGATGAGTGGTTCCACCACACACCAAACTTAATCCTCAATAAATGGGGGAAAACCCCCGTGCATCACCTGTCAATT
CTAGAAATTGAACTCAGGTCATTAGGCTGCACAACCACACACCAAGGCTCTCTTTGCAGCCACAGGCCAGTTGATCAGAC
TCTTCTAAATGATTT---TTTTTCCTGTAAGAACTCCTCGTGCTCAGCGTGTGCCTTCATCTGAGCACTGAAAAACTAGT
AATCGTTAGTCCAGAGCCAGGATAACGTTGTACGTAATTAACCGGACAACCGTAATTAGCGTCAGGTTCAGGATGGTACA
AGGCTCGTGCATACTCGTCGACCAGCAGCATATAGAGCTTTGCTTCGTGTAAACGATTGGACAGATACATGTACACGAGC
TACAGGACGAGTTCGAGTTGACGTATGGTTCACAAAGGATAGAGAGGAATCAAGAATCTGACGAGGATAACATTTGGATA
TCCCAAGGTTTGATATTTTTTTCTAATCTGGAAAAGGCCAGTGGGAGGGAAAGAACCTTGGCAGGCATGCGTATATGGGT
TTTATCACAAGACCGACCGTATATTATCTTGGCAATCGTGCAGCTCATCGTGTCACTTACCGCTGGCCCCTT-GGAAGCA
TGGGAATCTCCGGTCAGTGACACCTCCCAGATTCACTTTGCCACGACTACATTTCGAATGGTGCAC--------------
-----GCATCTAAGGGCCAAGATGGGACATGGAATGTTTATG--ATCTATC-CTATGTCA--CACAGCAACCGGTATAAA
AGGGC-AAGCTACCTCTTCGT---------CATTCCAGCATCGGAAAGCAAAGGCACACACAACACAAGTGCACAACCAC
AAAGCTTAGGTAGAATCAAACACG-----------GTGAAACCAAATGGAGGGAACCATGAAGAGCGGAGCCAGGGGGAT
CAAGGGGAAGGTGGCGATGGTGTACTCCAAGTACGCCGGCAAGGCCCAGGCCAAG--------CCTGCCCCGAGCGTC--
-ACTACCGCACACGCCTACCAGCCC-----------------AGGTACCCTTCTTCCATTGACGCGACGGCGAGCGCCGC
CTATGCCACCACCGGTGACGTCGACGAGAGGGCCACGGCCTTCATACTGTCTGTCCGGGAGCGCTTCAAGAACGAGCAGA
AGATGGTGATTTAGCTGAGCTCGGTCGT--------GGT-CGGCCGGTGAGATTT-------------------------
---TGG-AACATCTTCTCGGTAGCCATGGATACATACT-------TGTGTCTA----GGT------GGTACACCATGTAC
ATTTTCTTT--TCTTTTCTCTCC-T--TTTGTGGACTTCAGTTTGACCATAAGAGTGG-AAGAGAGGGATGAT-------
--------AATATAAATCCCATTTCCGATAC----CAT-TTGGGATGTGA--ATATGATTCTCAATCAGAATGGAGTTTG
TGTGATCTCCACTGTTCATTCTGGTTC--GTCCAAGACTCCA-CTCGACC--GTGTAAAGAAATTTAAAATGGCAA-TTC
-C-TTTATGATGTCAAGAACCTCTTTACAAGTGCCGTTT-----------------------------------------
--------------------------------------------------------------------------------
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>chr3B_725
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-------------------------------------------CTCTTCGTGTCGCTTACCACTGGACCCTCCCAAAGCA
TGAGAATCTCCTGTCAGTGACACGTCCCAGATTCACTTTGCCAGAGCTGCATCCCGTTAGGTGCACGCATGTTCATTATC
CACTGGCACCGAAAGGCCAGAATGTTACATGGAATGTCTATGGCCTTCCTAGCTACCACT--TGGTCATTCTAGTATAAA
AGAGGGTAGCTACCTCTTCGGCATTCCACACATTCCAGCATCGCAAAGC-AAGGCGCACACAACACAAGTGCACAGCCAC
AAAGCTTAGGCAGAATCAAACACA-----------GTGC-----AATGGAGGGAACCATGAAGAGCGGCACCAGGGGGAT
CAAAGGGAAAGTGGCTATGGTGTATTCCAAGTACACCGGGAAAGGGCAGGCCAAG--------CCTGCACCGAGCGTC--
-ACTACGGCGCACGCCTATCAGCCC-----------------AGGTATCCTTCTTCCATCGACGCGAGGGCAAGCGCCGC
CTATGCCGCCACCGGTGACGTCGACGAGAGGGCCACGGCCTTCATACTGTCCGTCCGAGAGCGCTTCAACAACGAGCAGA
AGATGATGAGCTAGTTGAGCTCCGTCGT--------GGCCGGTCAG-----TCCAGGCTTCAGGAGAGATTACATATTTG
--ATGGAAGCATCTTCTATGCAGCCATGGATACATACAGTATACATGTCTAGGTAGTAGT------AGTACACCGTGTAC
TTCTTTTTC--TGTTCTCTCTCTTT--TTTGTGAACTTCAGTTTGACCATAAGAGTGTGGAAGTAGGGATGATAATATAA
AGGGACCTAATATAAATCTCATTTCTGAAGT----CATGCTGGGATGTGA--ATACGATCTTCCATCTAAGTGGAGTTTG
TGAGATCTCCACCGTTCATTCTTGTTTTGGTCCAACACTCAT-CTTGACC--G-----AGAATTTTTAAATTGCAGTTCC
TT-TTTTGGATGTGGAGAACCTCTCTACAAGTGTCGTTT-----------------------------------------
--------------------------------------------------------------------------------
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>chr3A_725
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-------------------------------------------CTCCTCGTGTCACTTACCACTGGACCCTCCCGAAGCA
TGAGAATCTCCAGTCAGTGACACCTCCCAGATTCGCTTTGGCAGAGCTACGTTTCGTTGGGTGCACGCATGTTCATTATC
CTATC--------------------------------CTATGGCATCAAAC-CTATCTCA--CGCACCAACCAGTATAAA
A--GG-CAGCTGCCTCTTCGT---------CATTCCAGCATCGCAAAGCAAAGGCACACACAACACAAGTGCTTAGCCAC
AAAGCTTAGGCAGAATCAAACACA-----------GTGC-----AATGGAGGGAACCATGAAGAACGGCGCCAGGGCGAT
CAAAGGCAAGGTGGCGATGGCGTACTCCAAGTACGCCGGCAAGGCCCAGGCCAAG--------CCTGCCCTGAG---C--
-ACTACAGCACACGCCTACCAGCCA-----------------AGGTACCCTTTTTCCATTGACGCCACCGCGAGCGCCCC
CTACGCCGCGGCTGATGATGTCGACGAGAGGGCCTCGGCGTTCATACTGTCCGTCCGAGAGCGCTTCAAGAACGAGCAGA
CGATGATGAGTTAGATGAGCTCCGTCGT--------GGCCCGTCAGGTCGGTCCAGGCTCCGGGAGAGGTTTTATATTTG
--ATGG-AACATCTTCTGGGTAGCCATGGATATATACA---TACATGTCTCTA----AGT------GGCACACCATGTAC
TTTTCCTTT--TTTTCCCTCTCCTT--TTGT--AACTTCAGTTTGACCATAAGAGTGG-AAGAAAGGGATGAT-------
--------AACATAATCCCCATTTCCGAAAAAAAAAACGCTGGGATGTGA--ATACGATCCTTCATCAAAGTGAAGTTTG
TGTG-------CCGTTCATTGTTGTTG--GCCCCACAGTTCATCTCGACC--GTGTAAAGAATCTTAAATTT-CAA-TTC
-C-TTTTTTATGTCGCGAACTCCTTTCCATGTGCCGT-------------------------------------------
--------------------------------------------------------------------------------
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>chr3D_731
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-------------------------------------------------GTGTCACTTACCACTGGACCCTCCCAAAGCA
TGAGAATCTCCTGTCAGTGACACCTCCCAGATTCACTTTGCCAGAGCTGCATCCCGTTAGGTGCACGCATGTTCATTATC
CACTGGCATCGAAATGCCAGGATGTGACATGGAATGTCTATGGCCTTCCTAGCTACCACT--TGGTCGTTCCAGTATAAA
AGAGGGTTCTTCGGCATTCCA---------CATTCCAGCATCGCAAAAC-AAGGCGCACACAACACAAGTGCACGG-CAC
AAAGCTTAGGCAGAATCAAACACA-----------GTGC-----AATGGAGGGAACCATGAAGAGCGGCGCCAGGGGGAT
CAAAGGGAAAGTGGCTATGGTGTACTCCAAGTACGCCGGCAAAGGGCAGGCCAAG--------CCTGCGCCGAGCGTC--
-ACTACGGCGCACGCCTACCAGCCC-----------------AGGTATCCTTCTTCCATCGACGCGAGGGCGACCGCCCC
CTATGCCGCCGCCGGTGATGTCGACGAGAGGGCCACGGCCTTCATACTGTCCGTCCGAGAGCGCTTCAAGAACGAGCAGA
AGATGATGAGCTAGTTGAGCTCCGTCGT--------G------CCGGTCAGTCCACGCTCGAGGAGAGGTTACATATTTG
--ATGGAAACATCTTCTATGTAGCCATGGATACATACAGTATACATGTCTAGGTAGTAGG------AGTACACCGTGTAC
TTCTTTTTC--TGTTCTCTCTCTTT--TTTGTGAACTTCAGTTTGACCATCAGAGTGCGGAAGTAGGCAGGATAATATAA
AGGGACCAAATATAAATCTCATTTCTGAAGT----CATGCTGGGATGTGA--ATATGATCTTCCATCTAAGTGGAGTTTG
TGAGATCTCCACCGTTCATTCTTGTTTTGGTCCAACACCCAT-CTCGACTCTG-----AGAATTTTTAAATTTCAGTTCC
TT------------------------------------------------------------------------------
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>chr3A_859
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-------------------------------------TTATG--ATCTTTC-ATATGTCA--CACACCAACCA-TAGAAA
AGGGC-AAACTACCTCTTCGT---------CATTCCAGTATCGGAAAGCAAAGGCACACACAACACAAGTGCACAACCAC
AAAGGTTAGGTAGAACCAAACAAGAACCAAACACAGTGAAACCAAATGGAGGGAACCATGAAGAGCGGCGCCAGGGTGAT
CAAGGGGAGGGTGGCGATGGTATACTCCAAGTACGCCGGCAAGGCCCAGGCCAAGGCGCCAAGCCTGCCCCGAG---CGT
CAGTACCGCATACCCCTACCAGCCCAGGTACCCAAAAAAAAAAGGTACCCTTCTTCCATCGACGCGACGGCGAGCGCCCT
CTGTGCCGCCACCGGTGACGTCGACGAGAGGGCCACGACCTTCATACTGTCCGTCCGAGAGCGCTCCAAGAACGAGCAGA
AGATGGTGATTTAGCTGAGCTCGGTCGA--------GGT-CGGCCGGTTGGTCCAGGCTCCAGGAGAAATTTTATATTTA
AAGTGG-AACATCTTTTGGGTAGCCATGGATAGATAGT-------TGTGTCTA----GGTGGTACAGGTACACCATGTAC
CTTTTCTTT--TCTTTTCTCTCTTTCTTTTGTGGACTTCAGTTTGACAATAAGGGTGG-AAGAAAGGGATGAC-------
--------AATATAAATCCCATTTCCGAGAC----CATGTTGGGATGTGA--ATATGATCCTTAATCAGAATGGAGTCTG
TGTGATCTCCACTGTTCATTCTTGTTC--GTCCAACACGCCATCTCGATC--GTGTAAAGAAATTTAAAATCGCAGTTTC
-T-TTTATGATGTCGAGAACTTCTTTACAA--------------------------------------------------
--------------------------------------------------------------------------------
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>chr3D_865
T-------------------------------------------------------------------------------
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------------------------------------------------CTACCTATCTCA--TGCACAAACCAGTATAAA
AGGGG-TAGCCACCTCTCCGG---------CGTTCCAGCATCGCAAAGCAAAGGCACACACAACACAAGTGCGCAGCCAC
AGAGCTTAGGCAGGATATAAAACA-----------GTGC-----AATGGAGGGAACCATGAAGAACGGCGCCAGGGTGAT
CAAGGGGAAGGTGGCGATGGCGTACTCCAAGTACGCCGGCAAGGCCCAGGTCAAG--------CCTGCCCCGAG---CGT
CACTACCGCACGCGCCTACCAGCCC-----------------AGGTACCCTTCTTCCATCGACGCCACCGCGAGCGCCCC
CTACGCCGCGGCCGGTGATGTCGACGAGAGGGCCACGGCGTTCATACTGTCCGTCCGAGAGCGCTTCAAGAACGAGCAGA
CGATGATGAGTTAGATGAGCTCCGTCGT--------GGCTGGTCAGGTCGGTCCAGGCTCCGGGAGAGGTTTTATATTTG
--ATGG-AACATCTTCTGGGTAGCCATGGATATATACA---TACATCTGTCTA----AGT------GGTACACCATGTAC
TTTTCCTTC--TTTTTTCTCTCCTT--TTGC--AACTTCAGTTTGACCATAAGAGTGGGAAGAAAGGGATGAT-------
--------AACATAATCCTCATTTCTGTAAA----AATGCTGCGATGTGAATATATGATCCTTCATCAAAGTGGAGTTTG
TGTG-------CCGTTCATTTTAGTTT--GCCCGACAGTTCATCTCGACC--GTATAAAGGATCTTAAAATTTCAGTTCC
-T-TTTTGGATGTCGAGAGCTCCTTTACAAGTGCCGT-------------------------------------------
--------------------------------------------------------------------------------
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>chr3B_865
T-------------------------------------------------------------------------------
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------------------------------------------------CTACCTATCTCA--CGCACAAACCAGTATAAA
AGGGG-TAGCCACCTCTCCGG---------CGTTCCAGCATCGCAAAGCAAAGGCAGACACAACACAAGTGCGTAGCCAC
AAAGCTTAAGCAGAATCAAACACA-----------GTGC-----AATGGAGGGAACCATGAAGAACGGCGCCAGGGTGAT
CAAGGGGAAGGTGGCGATGGTGTACTCCAAGTACGCCGGCAAGGCCCAGGTTAAG--------CCTGCCCCGAG---CGT
CACTACAGCACGCGCCTACCAGCCC-----------------AGGTACCCTTCTTCCATCGACGCCACTGCGAGCGCCCC
CAACGCCGCGGCCGGTGATGTCGACGAGAGGGCCACCGCGTTCATACTGTCCGTCCGAGAGCGCTTCAAGAACGAGCAGA
CGATGATGAGTTAGATGAGCTCCGTCGT--------GGCCGGTCAGGTCGGTCCAGGCTCCGGAAGAGGTTTTATATTTG
--ATGG-AACATCTTCTGGGTAGCCATGGATGTATACA---TACACGTGTCTA----AGT------GGTACACCATGTAC
TTTTCCTTC-TTTCTTTCTCTCCTT--TTGT--AACTTCAGTTTGACCATAAGAGTGGGAAGAATGGGATGAT-------
--------AACATATTCCCCATTTATGA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr3D_870
--------------------------------------------------------------------------------
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--------------------------------------------------C-CTATCGCA--CGCAGCAACCACTATAAA
A-GGG-CAGCTACCCCTTCGT---------CATTCCAGCATCGCAAAGCAAAGGCACACACAACACAAGTGCGCAGCCAC
AAAGCTTAGGCAGAATCAAACACA-----------GTGC-----AATGGAGGGAACCATGAAGAACGGCGCCAGGGTGAT
CAAGGGGAAGGTGGCGATGGCGTACTCCAAGTACGCCGGCAAGGCCCAGGCCAAG--------CCTGCCCCGAG---CGT
CACCACCACACGCGCCTACCAGCCC-----------------AGGTACCCTTCTTCCATCGACGCCACCGCGAGCGCCCC
CTGCACCGCGGCCGGTGATGTCGACGAGAGGGCCACGGCGTTCATACTGTCCGTCCGAGAGCGCTTCAAGAACGAGCAGA
CGATGATGAGTTAGATGAGCTCCGTCGT--------GGCCGGTCAGGTCGGTCCAGGCTCCGGGAGAGGTTTTATATTTG
--ATGG-AACATCTTCTAGGTAGCCATGGATATATACA---TACATGTCTCTA----CGT------GGCACACCATGTCC
TTTTCCTTT-TTT-TTCCTCTCCTT--TTGT--AACTTCAGTTTGACCATAAGAGTGG-AAGAAAGGGATGAT-------
--------AACATAATCCCCATTTCC------------GCTGGGATGTGA--ATACGATCCTTCATCAAAGTGGAGTTTG
TGTG-------CCGTTCATTTTTGTTG--GCCCCACAGTTCATCTCGACC--GTGTAAAGAATCTTAAATTT-CAA-TTC
-C-TTTTTTATGTCGAGAACTCCTTTCCATGTGCCGT-------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr3B_870
--------------------------------------------------------------------------------
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--------------------------------------------------C-CTATCTCACGCGCACTACCTAGTATAAA
TGGGG-TAGCTACCGCTTCGT---------CATTCCAGCATCGCAAAGCAAAGGCACACACAACACAAGTGCGCAGCCAC
AAAGCTTAAGCAGAATCAAACACA-----------GTGC-----AATGGAGGGAACCATGAAGAACGGCGCCAGGGTGAT
CAAGGGGAAGGTGGCGATGGCGTACTCCAAGTACGCCGGCAAGGCCCAGGTCAAG--------CCTGCCCCGAG---TGT
CACTACCGCACGCGCCTACCAGCCC-----------------AGGTACCCTTCTTCCATCGACGCCACCGCGAGCGCCCC
CTACGCCGCGGCCGGTGATGTCGACGAGAGGGCTACGGCGTTCATACTGTCCGTCCGAAAGCACTTCAAGAACGAGCAGA
CGATGATGAGTTAGATGAGCTCCGTCGT--------GGCCGGTCAGGTCGGTCCAGGCTCCGGGAGAGGTTTTATATTTG
--ATGG-AACATCTTCTGGGTAGCCATGGATATATACA---TATATGTGTCTA----AAT------GGTACACCATGTGC
TTTTCCTCTTTTTTTTTCTCTCCTT--TTGT--AACTTCAGTTTGACCATAAGAGTGGGAAGACAGGGAAGAT-------
--------AACATAATCCCCATTTCTGTAAA----AATGCTGCGATGTGAATATATGATCCTTCATCAAAGTGGAGTTTG
TGTG-------CCGTTCATTTTAGTTT--GCCCGACAGTTCATCTCGACC--GTATAAAGGTTCTTAAAATTTCAGTTCC
-TAATTTGGATGTTGAGAACTCCTTTACAAGTGCCGT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr3A_870
--------------------------------------------------------------------------------
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--------------------------------------------------C-CTATCTCA--CGCACTAACCAGTATAAA
TGGGG-TAGCTACCCCTTCGT---------CATTCCAGCGTCGCAAAGCAAAGGCACACACAACACAAGTGCTTAGCCAC
AAAGCTTAGGCAGAATCAAACACA-----------GTGC-----AATGGAGGGAACCATGAAGAACGGCGCCAGGGCGAT
CAAGGGGAAGGTGGCGATGGCCTACTCCAAGTACGCCGGCAAGGCCCAGGCCAAG--------CCTGCCCCTAG---CGT
CACTACAGCACACGCCTACCAGCCC-----------------AGGTACCCTTCTTCCATCGACGCCACCGTGAGCGCCCC
CTACGCCGCCGCCGGTGATGTCGACGAGAGGGTCACGGCGTTCATACTGTCCGTCCGAGAGCGCTTCAAGAACAAGCAGA
AGATGATGAGTTAGTTGAGCTCCATCAT--------GGCCGGTCAGGTCAGTCCAGGCTCCGGGAGAGGTTTTATATTTG
--ATGG-AACATCTTCTGGGTAGCCATGGATACATACA-------TGTGTCTA----AGT------GGTATACCATGTAC
TTTTCCC---TTT-TCCCCCTCCTT--TTGC--AACTTCACTTTGTCCATAAGAGTGGGAAGAATGGGATAAT-------
--------AACATAATCCCCATTTCTGAAAA----TATGCTCGGATGTCA--ATATGATCCTTCATCAAAGTTGAGTTTG
TGTG-------TTGTTCATTTTTG-TT--GCCCGACAGTTCATCTCGACT--GTGTAAAGGATCTTAAAATTTCAGTTCA
-T-TTTTGGATGTCGAAAACTCCTTTACAAGTGGCGT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------
>chr1B_1617
CGC-----------------------------------------------------------------------------
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-------------------------------------TTTCTGCCGGCGTCGATCTTTGGCACGCCTGCCTCGGTCATCC
TAGCTCCATCGCACTTCGTCAAATAATGAAGGATTTTTCT--TTTC-ATGTAATAAAACGGATGCTCACTCTTGTCAAGC
ATGCCGTCTACGAAAACATATCAGACTACCTTTTAGTTCTTTGTCCATAGTTGCGTCCTTTTGTTTTGAGTTGATTCATA
GTGATGTTTGGACTTCTCCCATTCCTAGTAACACTGGAT-TCTTATACTATCTAGTTATCTTGGATGACTATTCTCA-TT
TGTGTGGACTTCTCCACTATGTAAGAAATCTGATGTTCCCGCCCCACTCATTGCCTTTTACA------TCTCCACACAAT
TTGGCCGCCCTATCAGTGATCTTCAAACTGACAA----CGGGAAAGAATCCGACAACATCATCATCCACACCCTTCTCTC
CACTCATGGCACTATTTTTCGTCTCACCTGTCCATACACCTCACAACAAAATGGTAGGGCTGAGCGCGTCCTTCGCACCA
TTAATGACTATGTCCGCACCCTTCTTTTTCATGCTCACATGCCACCCCTCTTTTGGTCGGATGCCTTCACCACCATAATT
CTCCTCATTAACCTGCGACCATGTCGTACCCGATGGAA----
>chr5B_1619
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------------------------------------TTTTCCGCCGATGTTGATCTTTGGCATGCC----TCGGGCATCC
TAGTTCCAACGCTCTTTGTAAAATAATCAAGGATTTTACT--TTTTGATGTAATAAAACGGATGCTCATTCTTGTCAAGC
ATGATGTATGGGCAAACATGTTAGACTTCCTTTTAGTTCCTCATCCACAGTTGTGTCTTATCCTTTTAAATTAATTCATA
GTGATGTATGGACGTCACCTATTCCTAGTAACTCTGGTT-GTTTATACTACCTTGTTATTCTGGATGATTATTCTTACTT
TGCGTGGACTTTTCTGCTTTGTAGAAAATCTGATGTTCCCGCCACCCTCATTACTTTCTACTCCTATGTGTCCACTCATT
TTGGTTGTCCTATCCTTGCTTTTCAGACTGACAA----TGGGAAAGAATTTGATAACATCACCAT-CCCACTCTCCTTTC
CAACCATGGTACAATCTTCTGTCTCACCTATCCATACACTTCGCAACAAAATAGTAGAGCAAAACGTGTCCTTCGTACTC
TCAATTATTGTGTTCATACCCTTCTCTTTCATGCCTACATGCCACCTCGTTTTTGGCCCGACGCCCTCGCCACCGCCACC
CTTCTTATTAACCTTCATCCTTGTCGTGTTCGTTGGAA----
>chr5D_1620
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-------------------------------------TTTCTGCCGGCTTTGATCTTTGGCACGCCCATCTCGGCCATCC
TAGCTCCACCGTACTTCGTCAAATAGTCAAGGATTTTTCTTTTTTC-ATGTAATAAAGCGGATGCTCATTCTTGTCAAGC
ATGCCGCATGGGCAAACATGTTAGACTCCCGTTTAGTTCCTCTTCGACAGTTGCATCTTATCCTTTTGAATTAATTCATA
GCGATGTATGGACGTCACCTATCACAAGTAATTCTGGTT-TTCTATATTACCTTGTTATTCTTGATGACTACTCTCACTT
TGTGTGGACTTTTCCGCTTCGTAGGAAATCCGACGTTCCCGCGACTCTCCTCGCATTTTATTCCTATGTGTCTGCACAAT
TTGGCCGTCCAATACATGCTCTTCAAACTAACAA----CGGGAAGGAATTCGACAACATTACCATCCGCACCCTTCTCTC
CAACCACGTCACTATTTTCCGGTTAACATGTCCATATACTTGCCAACAAAATGGCCAGGCAGAACGAGTCCTTCGCACTC
TTAACGATTGTGTCCGCACTCTTTTGTTCTAGGCTTACATGCCACCCCGGTTTTGGTCGGATGCCCTTGCCACCGCCACA
CTTCTTGTTAACCTCCGCCCTTGTCGTGTCCGTTGGAGTTAC
>chr6A_1636
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-----------------------------------------------------TCTTTGGCACGCCCATGTCGGTCATCC
TAGCTCCACCGCTCTTCGTCAAATAATGAGGATTTTTCTT--TTTC-ATGTAATAAAACGGATCATCACGCTTGTCAAGC
ATGCCATATGGGCAAACAAGTTAGACTTCCTGTTGGTCCTTCATCCACAATTGTGGCTTATCCTTTCGAATTAATTCATA
GTGATGTATGGACATCGCCTATACGTAGTAATTCCAGTTATTTTATACTATCTTGTCATTCTAGATGATTATTCTCACTT
TGTGTGGACTTTTTTGCTTCGTAGGAAATCCGATGTTCCCGTCACACTCATTGCATTCTACTCCTACGCGTCTACTCAGT
TTAGCCGTCCTATACACGCTCTTCAGACCGACAA----CGATAAAGAATTCGATAACATCACCATTCGCACTCTTCTCTC
CAACCACGGTACAATTTTCTGCCTCACATGTCCATACACCTCACAACAAAACGGTAGGGCTAAATGTGTTCTTCATACTC
TTAATGAATGTGTTCACGCCCTTCTTTTTCATGCTTACATACCACCTCGTTTTTGGCCCGATGCCCTGGCCACCACCAAC
CTTCTCAACAACCTTCACCCTTG-------------------
>chr4D_1676
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-------------CTTTGTCAAATAATGAGGGTTTTTCCT--TTTC-GTGTAATAAAACGGATTATCATACTTGTGAGGC
ATGTCGTCTAGTCAAACATGTCTATCTCCTCTTTAGTTCATCAGCTACAGTTGCGTCTTTTCCCTTCGAATTAATTCATA
GTGATGTATGGACCTCTCCAATTCCGAGTAATTTAGGTT-TTCTTTATTATCTTGTTATACTTGATGATTACTCACACTT
TGTGTGGACATTTCCTCTTCGATC-AAATCCGATGCTCCCGCTGCCGTTATTGCCTTTTATTCTTATGTGTCCACACAAT
TCAGTCGCTCCATCCTTGCTCTTCAGACATATAA----CGCGAAAGAGTTTGACAACCTCACTATTTGCCTCCTTCTTTC
TACTCATGGCACCGTTTTTTGTTTAACGTGTCCTTATACCTCACAGCAAAACGGCCGAGCTGAACGCATTCTCCGCATGA
TCAATGCTTGTCTTCGCACTCTTCTTTTTCATGCTCACATGCCTCCAGAGTTTTGGCCTGAT------------------
------------------------------------------
>SNPs
-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
---S---SSS----------------S----------SSSSS-SSS-SS-------------------------------
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-------------------------------------S------------------------------------------
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------------------------------------------------------------S-S-------S---------
-----SS-S------SSS-----S-----------------------S---------------S------S---------
-S----------------------------------------------------------S-------------------
-------------------S-S---------S-------------------------------------------S--S-
---------------------S-----S----------------------------------------------------
----------------------------------------------S---SS----------------------------
-------------------------------------S------------------------------------------
-------------------------S-------------S----------------------------------------
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--------------------------------------------------------------S-----------------
-----------------------------------------------------------------S------------S-
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----S-------------------------------------------------S-------------------------
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-------------------------S--SSSSSSSS-------SS--------------S--------------------
----------------SS--------------------------------------------------------------
--------------------------------------------------------------------S-----------
----------------------------------------------------S---------------------------
---S-------------------------------------------S-S------------------------------
--S------------S-----------------------------------S--------------------S-------
S-------------------------------------------------------------------------S-----
--------------------------------------S------------S----------------------------
---------------------------S---------S-----------S------------------------------
-----S------------------------S-------------------------------------------------
------S---------------------------SSSS-------S---------S------------------------
--------------------------S-----------S----------------------------------------S
---------------------------------------------------------------S--------SS------
-----------------------S------------------
>forward_28
--------AAAATGGCCGTATGCATCGC----------------------------------------------------
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>reverse_3005
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--------------------------------------------GGTCCAGGCTACAGGAGAGA----------------
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