>input_sequence_85703
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-------------ATGCCGATAAGGAGCGCCCCGTGTGCGTGGACGGTGGAGGAATTCAAGAAGTGGGTCGACGTGAACG
GCGACGGCCGGATCAGCAAGGCCGAGCTCCGGCAGGCCATCCGCCGCCGGGGCTGCTGGTTCGCCACCGTTAGGGCCGGC
CGCGCCGTCCGCCGCGCCGACAGGGACCACAACGGCTACGTCGACGACGCCGAGCTCGAGAACCTCGTCGCTTTCGCGCG
GGAACACCTCGGCATGAACATCTCTGCCCGTTAG----------------------------------------------
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>chr2A_1_TraesCS2A01G166200
AAAATAGTTGCCTGCTCTTGTCACGGCTCAGTTGCCTGCTAGTGCCAACATGGTCTTCACTTGTGTGACAGTCACGTCAA
GGCCATGAAATGCATATAGCCGCTGGGATTGCGGA-AGGTGGTGGCGACATTACAT---GGTGACTTCGATTTGGTGGTG
CTTCTCAAGTA-CCGATCTCGAACTTCGGGGTGAAAA-TCTAAGGTCAAACTTTAATTGGTTATACCTAGCAATGGCGAT
GTTTTTGTGTCGTTACCTTGTTGAAGGCATTGCTCGGA----------CTTGATCTCCAGGGTGAAAACC-CATGGTCTA
ACCTTCGGCGGTTGGACCCGGCAAT-GGCGGCACTTGAGTGTTGTTCCCTTTCTGAAGGTGTTGCTATTGGAGAACTT-C
TTCATTGTACTTGTGATGTTAAGA-ATGGTTGGTGCGGATATGGTCGCT-GCTGTAACTTGTTGAT-CATTGTTTTGATC
ACTTTGGAGTTTT-----TCTTT--TTTCTTTTTACGCCAC----CAAGGCATAACTTGGATCTTGTATGATTTTGCTAT
TTACCGGTGTGA--TTTTTTATA--TGTG--TGTTAGTGTTGGCTGTGTGCATCTTAGCTATGCAGAGGTCGGGTGTGTG
CTCATTGTGTTTGTATCCCCTTAATACTTTATTTTGAGTTAATAAAATCCATCCTTTATCCAAAAAATCAGCCAAAATAG
TTAGGGTCAAACGATGTCATATGCACTTGCTCATTACTAGCATCGCGGTAAGTGTAGCGACTAAACT-----AATGATCG
ATGCGATGCTCAAGGCTGAAATTTACCTTTGCTGCCCCCCACCAATAACTGAGACGAGATTCGGATTCTGATCAACACCC
CTCGCAGCCTGCAGATAGA----AACGAATAAACTATAAAGTCACGCGATGCTTCCAGGACCGGATCGACTATA----AA
AAGGAGGCACGACCGCGAGAAGCTCGGCAGTCTCCAGCTGCAAGGACTAG-ATAAGCTGGTTCTGAGGTTCTAAACACCA
AATAGTATAGGCCATGCCGATAAGGAGCGCCCCGTGTGCGTGGACGGTGGAGGAATTCAAGAAGTGGGTCGACGTGAACG
GCGACGGCCGGATCAGCAAGGCCGAGCTCCGGCAGGCCATCCGCCGCCGGGGCTGCTGGTTCGCCACCGTTAGGGCCGGC
CGCGCCGTCCGCCGCGCCGACAGGGACCACAACGGCTACGTCGACGACGCCGAGCTCGAGAACCTCGTCGCTTTCGCGCG
GGAACACCTCGGCATGAACATCTCTGCCCGTTAGCTACCTCGCTAGAGCGTTACCTGCTCAGACTAATGCCCAGTAT---
-----------------------CGTGTGATGCGTTCAACTTGACATGGAAGCTTCTCCTGA-------ATAATACTATG
TGTAAAAATCCAGGAGAATTTGTCAAGGTTTGTTACGACGACGACGTCTGCTACTATGTATGCAGTTGCTTAATTGTGAG
TGTGTCTGCTGTAAGATTTGAAAGTTGCATGAAGTGCTTAATAT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ATACAAGTTGTACTCGTGGCTTGCGCATTTTGACTGC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GGACCTTCGCTGCGGAACGGGATCCTCTAACATAGAGAAGCAAAGTAACCGTGTCTTGGCTGCTGGGGATGGC
CAC------------GTCTCCTTTGACTGCTCGATGCCGTAACCGTACCCCAAAATTT----------------------
--------------------------------GGAAGGGGCGTATGAATACTGCATCTTTTTGTTGATGGATTACAT---
-TTGTTTTGCCTA-GTCGCGCTCCTCCAGCATTTTAGCTCAGTCGTCCACTCTGAAGTTCTCACAAGTGTCCCAACGGAA
CTGTCAAGTCTTAGG-ACATGAGCCTGACGACGTATCATCAACAAATGTTATTTCACGATGCTACTC---TGCTGTACAA
CGATACACTCTCCTTCAAGAATTATTCGTACCAAACATACCAT--------TGTATTTCACAAGAGGTAGGGTTGAGCAA
TTATTTCCTGCATACTGAAAAGGCACCGCACAATATGAAGGTGAAATCCATC-------------------------AGA
AATGAGCCCACATCCACAACTCTAATGATCTTCGCCTTGCACAGTTTTGGGCACCACCTGAGATGAAGGCACACGGGACG
AAATGCAGTTATGCGCTGCTTTCATTGCGTTAAGAAAGGATAGAACAGTTATACAATTGATCACATGGCTGGAACAAACT
GAAGAAAATAAAAACAGCCAAGGACCAACAGCAGCAAAAGTTGACGCATTACAGCAAATTAGTCAGGGCGTGTGATCTGT
CAGCAAGTGACTGGACTCTTTTCCTTCCAGTGTCCGACCAAAGTGCAGCTTCAATCTGGAG
>chr7B_11
----------CCAGCTCTTGTCGCGGCTCAGTTGCCTGCTAGTGCCAGCATGGTCTTCACTTGCGTGACATTCACGTCAA
GACCATGAAATGCATATAGCCGCTGGGATTGCGGA-AGGTGGTGGCGACATTACAT---GGTGACTTCAATTTCATGGTG
CTTCTCAAGTA-TCGATGTCGAGCTCCGGGGTGAAAA-CCTAAGGTCAAATCCTAATTGGTTATACCTGGCAATGGCGAT
GCTTTTGTGTCGTTACCTTGCTGAAGGCATTGCTCGGATTTGTTCGGACTTGATCTCCAGGGTGAAAACC-CATGATCCA
ACCTTCGGCGGTTGGACCTAGCGAT-GGCGGCGCTTGAGTGTCGTTCCCTTTCTGAAGGTGTTGCTATTGGAGAACTT-T
TTTGTTGTACTTGTGATGTCAAGA-ATGACCGGTGCGGATATGGTCGCT-GTTGTAACTTGTTGAT-CATTGTTTTGATC
ACTTTGAAGTTTTTCTTTT------TTTCTTTTTACTCCAC----CAAAGCATAGCTTGAGTCTTGTATGACTTTGCTAT
TTGCCGGTGTGA--TTTTTTATGTGTGTG--CGTTGGTGTTGGCTGC-TGCATCTTAGCTATGCAGAGGCCGGGTGTGTG
CTCATTGTGTTTGTATCCCCTCGATGCTTCATATTGAGTTAATAAAATCCACCCTTTATCAAAAAAA-------------
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>chrUn_14
-------------GCTCTTGTGGCGGCTCAGTTGCCTCCTAGAGCCAACATGGTCTTCACTTGCATGACATTCACGTCAA
GACCATGAAATGCATATAGCCGCTGGGTTTGCGGA-AGGTGGTGGTGATATTACAT---GGTGACTTCAATTTGGTGGTG
CTTCTCAAGTA-CCGGTCTCGAGCTCCGGGGCGAAAA-CCTAAGGTCAAATACTAATTGGTTATACCTGGTAATGGCGAT
GTTTTTGTGTCGTTACCTTGTTGGAGGCATTGCTCGGATTGGCTCAAACTTGATCTCCAGGGTGAAAACC-CATGATCTA
ACTTTCGGCGGTTGGACCTAGAGAT-GGCGGCACTTGAGTATCGTCCCCTCTCTGATGGCGTTGCTATTGGAGAACTT-A
TTCGTTGTAATTGTGATGTCAAGA-ATGGTTGGTTCGGATATGGTCGCT-GCTGTATCTTGTTGAT-CATTGTTTTGATC
AATTTGGAGTTTT-----T------TCTCTTTATACTCCAC----CAAGGCATAGCTTGGGTCTTGTATGACTTTGCTAC
TTGCCGGTGTGA--TTCTTTATGTGTGTGTGTGTTGGTGTTGGCAGTGTGCATCTGAGCTATGCAGAGGCCGGGTGTGTG
CTCATTGTGTTTGTATCCCCTTGATGCTTCATTTTGAGTTACTAAAATCCACCCTTTATCGAAAAAA-------------
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-------------ATCA---------------------------------------------------------------
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-------------------------------------------------------------
>chr2D_49
------------------------------------------------CATGATCTTCACTTGCGTGACATTCACGTCAA
GACCATGAAATGCATATAGCCGCTGGGATTGCGGA-AGGTGGAGGCGACATTACAT---GGTGACTTCAATTTCATGGTG
CTTCTCAAGTA-CCGATGTCGAGCTCCGGGGTGAAAA-CCTAAGGTCAAACCCTAATTGGTTATACTTGGCAATGGCGAT
GTTTTTGTGTCGTTACCTTGTTGAAGGCATTGCTCGGATTTGCTCGGACTTGATCTCCAGGGTGAAAACC-CATGATCCA
ACCTTCGGCGGTTGGACCTAGCGAT-GGCGGCGCTTGAGTGTCGTTCCCTTTCTGAAGGCGTTGCTATTGGAGAACTT-T
TTTGTTGTACTTGTGATGTCAAGA-ATGGCTGGTGCGGATATGGTCGTT-GTTGTAACTTGTTGAT-CATTGTTTTGATC
ACTTTGGAGTTTTTC-TTT------TTTCTTTTTACTCCAC----CAAAGCATAGCTTGGGTCTTGTATGACTTTGCTAT
TTGCCGGTGTGA--TTTTTTATGTGTGTT--TGTTGGTGTTGGCTGCGTGCATCTTAGCTATGCAGAGGTCGGGTGTGTG
CTCATTGTGTTTGTATCCCCCTGAGGCTTCATTTTGAGTTAATAAAATCCA-----------------------------
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-------------------------------------------------------------
>chr2D_74
ACGGCAAT------------------------------------------------------------------------
GACCATGCTATGCATATAGCCACTGGGATCGCGGA-AGTTGATGGCGACATTACAT---GATGACTTCGATTTGGTGGTG
CTTCTCAAGTA-CCGGTCTCGAGCTCCGGGGTGAAAA-CCTAAGGTTAGACCTTGATTGGTTATACCTGGCAATGGCAAT
GTTTTTGCCTCGTTACCTTGTTGAAGAC---------ATTTGCTCGGACTTGATCTCCAGGGTGAAAATCCCATTACCTG
ACTTTCAGCGGTTGGACCTGGCGAT-GGCGGCGCTTAAGTGTCGTCCCCTTCTTGAAGGCGTTGCTATTGGAGAACTT-T
TTTGTTGTACTTGTGATGCCAAGA-TTGATTGGTGCGGATATAGTCGTT-GTTGTAACTTGTTGAT-CATTGTTTTGATC
ACTTCGGAGTTTTTC--TT------TTTCGTTTTACTCCAT----CAAGGCATAGCTTGGGTCTTGTATGACTTTGCTAC
TTGCGAGTGTGA--TTCTTTATGTGTGTG--CCTTGGTGTTGGGTGTGTGCATTTTAACTATGCAGAGGCCGGGTGTGTG
CTCATTATGTCTGTACCTCCTTGATGCTTTATTTTGAGTTAATAAAATCCACCCTTTATCGAAAAAA-------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>chr2D_92
--------------------------------------------------------------------------------
-----------GCATGTAGCTGTTTGGATTGCGAAAAAGTGGTGGCGACA--ACACATGTGTGGCATTCA--TGGTGGTG
CTATTTAAGCACCCGGTCTCGAGCTCCGGGGTGAAAA-GCTAGGTCCAACCTG-AGTTGGTTATACCTGGCAATGGCGAT
GTTTTTACGTCGTTACCTTGTTGAAGGCATTGCTCGGATATGCTTGGACTGGTTCTTCAGGATGAAAATC-TAGATTCTG
GCCTTGAATGGTTGGATCCAGCGAC-GGCGGCGCTTAAGCATCACTCCCTTCCTGAAGGCGTTGCTTTTGAAGAACCT-C
ATCGTC---CATGTGGTGTCATGAGGTAGTTGGTGCGAATATGGTCATTTGTTGTAGTTTGCTGATTCGCGGATCTGATC
ACTTTCTCTTTTTCT--TT------TCTTTG---------C----CTACGCATAGCTTTGGTCTTGTATGACTTTGCTAT
TTGCTGGCATGTTTTTG-----GTGTGTG--TG-TAGTGTTGGTTGTGTGTATCCTAACTATGTAGAGGCCGGGTGTGTA
CTCATTGTGTTTGTATCCTCTTGATGCTTCATTTTGAGTCAATAAAATCCATCCTTTATCGGAAAAA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------ATC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>chr7B_93
--------------------------------------------------------------------------------
------------CATGTAGCAGCTGGGATCGTAAAAAAGTGGCGGCGAAA--AGACATGATTGACTTCGATTTGGTGGTG
CTTCTTCAGTACCCGGTCTCGAGCTCGGGGGTGACAA-CCCTAGGTGTGACCCATGTGGGTTATACCTGGCAATGACGAT
GTTTTTACGTCGTTATCTTGCTGAAGGCGTTGCGCGGATATGCTTGGACTTGTTCTTCAGGGTGAAAACC-TTGAATCTG
ACCTATGATGGTTGGATCCGGTGAC-GACAATGCTTGAGCGTTGTTTACTTCTTGAAGGCGTTGCTATTGAAGAACAT-C
GTTGTC---CTTGTGGTGTTAAGAGATGGTTGGTGCGGATATGATCGTT-ACTGTAGTTTGTTGAT--GTTGTTTTGATC
ATTTTGGGTTTTTTT--TC------TTTTTT---------CTCGCTTCGGCATAGCTTTGGTCTTTTATGACTTTGCTCT
TCGTCGTCGT-G----TTTTGTGTGTGTG--TGTTAGTATTGGCTGTGTGCATCCTATCTGTGCGGAGGCCGGGTGTGTG
CTCATTGTGTTTGTATCCACTTGATGCTTCATTCTGAGTCAATAAAATTCACCCTTTGTCAAAAAA--------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>chr7D_96
--------------------------------------------------------------------------------
---------------ATAGTTGCTGGAATTATGGATAAGTGGTGGCGACA--ACACCTGGATGACTTCGAT--GATGGTG
TTACTTGAGCACCCGGTCTCGAGCTCCGGGGTGAAAG-CCTAGGTCTGACCCA-ATTTTGGTATACCTAGCAATGGCGAT
G-TTTTACATCGTTACCTTGTTGAAGGCATTATTCGGA-ATGCTCGGACTGATTCTTCAGGGTGAAAGCC-TAGATTCTA
GCTTTGGGTGGCTGGATCCAGTGAT-GGTGACATTTGAGTGTCGCTCCCTTTCTGAAGGCGTTGCTGTTGAAGAATCT-C
GTCGTC---CGCGTGCTGTCATGAGATGGTCGGTGCAGATATGGTCATT-GTTATAGTTTGCCGAT-CGTTGATCTGATC
ACTTTGGGGCATTTA--TTTATTATTTTTTT---------CTCGCCTACGTATAGCTTTGGTCTTATATGACTTAGCTAT
TTACCGGCGTGTTTTTGCA----TGCGTG--CGTTGGTGTTGGCTGTGTGCATCCTAGCTATGCAGAGGCCGGGTGTGTG
CTCATTGTGTTTGTATCCTCTTGATGCTCCATTTTGAGTTAATAAAGTCCACCCTTTATCGAAAAAA-------------
--------------------------------------------------------------------------------
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>chr1D_97
--------------------------------------------------------------------------------
----------------TAGCTGCTGGGATCGCGGA-AAGTGGTGGCGACA--ACAT---GATGACTTCGATTTGGTGGTG
CTTCTCGAGTACTCGGTCTTGAGTTCAGTGGTGAAAACCCTAGGTCTGACCTG-AATTGGTTATACCTGGCGATGGCAAT
GTTTTTGCGTTGTTACCTTGATGAAGGCATTGCTCGGATGTGCTCGGACTTGTTCTTCAGGGTGAAAACC-TAGAGTCTG
GCCTTTGTTGGTCGGGTCCAGTGAC-GGCGACGTTTAAGCGTCGTTTCCTTCCTGAAGGCGTTGCTGTTGAAGAAACTTT
CTCGTTGCGCTTGTTCTGTCAAGAGATGGTTCGTGCGGATATGGTCGTT-GATGTAGTTTATCGAC-CGTTGTTTTGATC
GTTTTAGAGTGTTTT--TC------TTTTTCTTTTCC---CTCGCTTAGGCATAGCTTGAGTCTTGTATGACTTTGCTCT
TTGCTGGCGTTTTCTTTTTCTTTTGTGTG--TGTTGGTGTTGGCTGTGTGCATCCTGATTATGCAGAGGTCGGGTGTGTG
CTCAATGTGTTTGTATTCCCTTGATGCTTCATTTTGAGTTAATAAAATCCATCCTTTATCGAAAAAA-------------
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-------------------------------------------------------------
>chr7D_153
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GGTG
CTATTCGAGCACCCAGTATCGAGCTCCGGGGTGAAAG-CCTAGGTCTGACTTTCTGTCATTTATACCTAGCAATGGCGAG
GTTTTTACGTCGTTACCTTGTTGAAGGCATTGCTCGGACTG----------ATTCTTTAGGGTGAAAACC-AAGATTCTG
GCCATCGATGGTTGGATCCGGTGACCGGCGCCGATTGAGCGCCACTCCCTTCTTGAAGGCGTTGCTGTTGAAGAATTT-C
ATCGTC---CGTGTGGTGTCATGAGATGGTCGGTGCGGACATGGTCTTT-GTTGTAGTTTGCCGAT-CACGGTTTGTATC
GCTTTGGGGTT---C--TT------TTTCCTTTTTTCCTTG----CCATGCATAGCTTTGGTCTTACATGACTTTGCTAT
TCGCCGGTGAGG----TTTTGTGTGCGTG--TGTTAGTGTTGGCTGTGTGCATCTTAGCTATGCAGAGGCTGGGTGTGTA
CTCATTGTGTTTGTATTCTCTTGATGCTTCATCTTAAGTCAATAAAATCTATCTTTTATCGAAAAAA-------------
--------------------------------------------------------------------------------
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-------------AGACAAAA-----------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>chr2B_668
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------ATCAGGCAAAATAG
TTAGGGTCAAACGATGTGATATGC-CTTGCTCATTACTAACATTGCAGTAAGTGTAGTGG-----CT-----AATGATCG
ATGCGATGCTCAAGCCTGAAATTTACCTTTGTCTCCCTCCACCAATAACTGAGATGGGATTCGGATTCCGATCAACACCC
CTCGCAGCCTGCAGATAGATAGAAACGA-------ATAAAGTCACGAGCTGCTGCGTGGATTGGATCAACTCAACTATAA
AAGGAGGCACGACCGCGAGAAAA--------------CTGCAAGGAC-----TAAGCTGGTTCTGAGCTGCTAGACACCA
TATAGCATAGGCCATGCCGATAAGGAGCGCCCCGTGTGCGTGGACGGTGGAAGAATTCAAGAAGTGGGTCGACGTGAGCG
GCGACGGCCGGATCAGCAAGGCCGAGCTCCGCCAGGCCATCCGCCGCCGGGGCTGCTGGTTCGCCACCGTTAGGGCCGGC
CGCGCCGTCCGCCGCGCCGACAGGGACCACAACGGCTACGTCGACGACGCGGAGCTCGAGAACCTCGTCGCTTTCGCGCG
GGAACACCTCGGCATGAACATCTCTCCCCGTTAGCTAGCTCGCTAGAGCGTTACCAGTTCAGCCTAATGCCCAGTATGGT
AACATAGTATCTAAGCCTAGCATCGTGTGATGGGTTCAACTTGACATGCCAACTTCTCCTGA-------ATAATATGTGT
-----AAATCCAGGAGAATTTTTTAAGGTTTGTTACGACGACGTCGTCTGCTACTATGTATGCAGTTGCTTAATTGTGAG
TGTTTGTGCTGTAAATTTTGAAAGTTGCATGAAGTGCTCAATAT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ATACAGATTGTCCTTGTGGCTTGCGTATTTTGTCTAC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GGAC------------------------------------------------GTCCTGGCTGCTGGGGATGGC
CGC------------GTCTTCTTTGACTGCTTGATGCCGAAACCGCACCCCAACTTTGCAGGGACTGCTTTCAGGACCGC
CACTTTATTATGTTATCTTTGTCGTGAAATACGGAATGGACATATGAATACTGCATCTTTTTGTTGATGGATTACACACA
GTTGTTTTGCCTA-GTCACCCTCCTCCAGCATTTTAGCTCAGTTGTCCACTTTGAAGT----------------------
-------CCAGTCTTAATATTAACCTGACGACATATCCTCGACAAATG-TATTTCACGATGCTACTACCTTGCTGCACAA
CGATACACTGACGTTCAAGAAAACA-------------AGCAT--------GCCATTCCACAAGAGGCAGGATTAAGCAA
TTATTTCCTGCATACTGAAAAGACACCGCCCAT------GGCGAAATCCATCTTTGGTGGGTCGGGACTGCGCCATCAGA
AATGAGCCCACATCCACAACTCTGATGATCTTCGCCTTG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr2D_700
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------ATATGCACTTGCTCGTTACTAGCATCGCGGTAAGTGTAGCGA-----CTAAACAAATGATCG
ATGCGATGCTCAAACCTGAAATTTACCTTTGCCGCCCCCCTCCAATAACTGAGATGAGATTCGGATTCTGATCAACACCC
CTCGCAGCCTGCAGATAGA----AACGA-------ATAAAGTCACGAGATGCTTCCAGGACCGGATCGACTATA----A-
AAGGAGGCACAACCGCGAGAA-CTCGGCAGTCTCCGGCTGCAAGGACTAGGATAAGCTGGTTCTGAGCTTCTAGACACCA
TAGCCCATAGGCCATGCCGATAAGGAGCGCCCCGTGTGCGTGGACGGTGGAAGAATTCAAGAAGTGGGTCGACGTGAACG
GCGACGGCCGGATCAGCAAGGCCGAGCTCCGCCAGGCCATCCGCCGCCGGGGCTGCTGGTTCGCCACCGTTAGGGCCGGC
CGCGCCGTCCGCCGCGCCGACAGGGACCACAACGGCTACGTCGACGACGCCGAGCTGGAGCACCTCGTCGCTTTCGCGCG
GGAACACCTCGGCATGAACATCTCTGCCCGTTAGCTACCTCGGTAGAGCTTCACCTGCTCAGACTAATGCCGAATATGGC
AACATAGTGTCTAAGCCTAGTGTCGTGTGATGGGTTCAGCTTGACATGTGAACTTCTCCTGAAACCTGAATAATATGTGT
-----AAATCCAGGAGAATTTGTTAAGGTTTGTTACGACGACGACGTCTGCTACTATGTATGCAGTTGCTTAATTTTGAG
TGTTTCTGCTGTAAAATTTGGAAGTTGCATGAAGTATATATAGATTGGGCAAATTTGACCTGTGGACGAAATCAAATCAC
AGAATGAACTGCCCGTGAAACTATTTCACGCAGCTGATCTTTTTATGTGACGCCCGACACGAAGGCGCCACACTACACTG
TGCAACGCCTCACAGATAGGCGCTACACGCCTGGCCAGAGTTGCATCCCAGACTGCCTAAAAATTACTAAATCATTGTGC
AAAGCCTAAGAGCTAGGCGCTGCACTGTATAGTGTGGCGCCTAGCTCTCAGGCGCTGCACTAGTGGTTGCACTATAAAAT
AAAGCAACCACTAGTGCAACGCCTAGAAGCTAGGCGCTACACTGTATAACTGTATAGTGTGGCGCCTAACTCTAAGGCGC
TGCACACTGACTTAGTAATTTTTGAATCACACGGGTGCGACACTGGCCAGGCGTGTAGCACCTATCTATGAGGCGTTGCA
CAGTGTAGTGTGGCGCCTTCGTGTTGGGCGTCACACGAAAAGGTAAGCCGCGTGAAATAGTTTCACGGGCAGTTCATTGT
GTGATTTGATTTCATCCATAGGTCAAATTTGTCAATTTTGCCATACAGATTGTCCTCGTGGCTTGCGCATTTTGACTACG
TGAGTGGTTTTTCTACGCCCCAGCTCGGTGCACCCACGCTACGTTCACGCAAGAAAACTTAGCAAAATATTTTTCTAAAA
AAATCTGAAACTTTGTGGAAATGATTATAAACAAATGTTATAGATGCTTGTAAATTTTGGCGCTCAAGGGACATCTGAGG
AGCTATGTAAAAAAGACAAAACTACTTAAAAAGTACATGCACTGTTTGAGCACAAATTGTAATTTTATTTTTCTTGTACA
GAGCTCCTCGGATGTCATTTGACCATCAAACTTTGCAAGCATGTTCATAATCATTTTCAGAAAGTTTCAGATTTTTTTCA
AAATGTTTTGATATATATATATTCTTTTGCATGGATGTAGCGTGGGTGCATCATGCTGGGGTTCAGACATACTTTCCTTT
TGACTATGGAC------------------------------------------------GTCTTGGCTGCTGGGGATGGC
CGCATAACCCGACGTGTCTTCTTTGACTACTTGATGCCGAAACCGTGCCCCAACTTTGCAAGGACTGCTTTCACGGCCGC
CACTTTATTATGTTATCCCTGTCGCGAAATACGGAAGGGACATATGAATACTGCATCATTTTGTTGATGGATT--ACACA
GTTGTTTTGCCTTGGTCGCCCTCCTCCAGCATTGTAGCTCAGTTGTCCACTTTGAAGTTCTTACAAGTGTCCCAATGGAA
CAGCAGTCCATTCTTAACATGAACCCGACGACATATCCTCAACAAATG-TATTTCACGATACTACTACCTTGCTGCACAA
CCATACACTAACGTTCAAGAAAACA-------------AGCATTGAAGCATGCCATTCCACAAGAGGCGGGATTAAGCAA
TTATTTCCTGCATACTGAAAAGACACAGCCCATAGG------GAAATCCATCTTTGGTGGGTCGGGACTGCGCCATCAGA
AATGAGCCCACATCCACAACTCTGATGATCTTCGCCTTGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>SNPs
-SSSS-S-SS--S---------S----------------------------------------S------S---------
-S------------------------------------------------------------------------------
----------------------S--S------------S-----------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
---S----------------------------------------------------------------------------
-------------------SS---------------S-----------------S-----S----------S--------
----------------------S---------------------------------------------------------
----------------------S--S----------------------------------S----------S--------
-----------------S------------------------------------------SSSSS---------------
--------------S-----------------S---------------------S-------------------------
----------------------------SSSSSSS-----------S---------------------------------
---------------------S-------------S-------------------------------S-----S------
S----S---------------------------------------------S----------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S---------------SS-S-----------------------SSSSS
SSSSS------------------S--------------------------------------------------------
---S----------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------SS----S-----------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
-S-----------------S-----------S-------S-------------SS--S----------------------
---------------------------------------S-S----------------------------------S---
-------------------S-----------------------S-------S---------S-------------S----
-S-SSSSSSS--SSS-------S---------S----S----------S-----------------S--------S----
---------SS-S--------SSSSSSSSSSSSSSSSS-S-----------SSS---S---------S---S--S-----
----------------------S------S--SSSSSSS--S--------------------------------------
-----------------------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_815
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GATCG
ATGCGATGCTCAAGG-----------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3176
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------ACCTGAGATGAAGGCACACG-----
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-------------------------------------------------------------
