>input_sequence_85701
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-----------------------------------------------------------ATGGCAAAAGCTTGCATACTC
CGCGGTGTGGTGCTGGTCGTGTGCGCGCTCCTGCTTCTCTCCTCCCATTTCCTGGCGGCTGAGCCGGCTGGCCGGCAATG
GGATCACGGGAGAGG---CGCCACGGTGGCTGCGACGACCATGGCGA------GAGGCCGTTTTGCGAGGAAGGTGTTGC
GGGAGGAGATGGTCCAGGCG---------GACGGCGACGTTGACATTGCCGGCTCTAAGAGGAAGAGCCCCGGTGGCCCC
GATCCGCAGCATCATTAA--------------------------------------------------------------
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>chr1B_1_TraesCS1B01G421400
TTTTTATAGGGAGATTTTCTTCAAATGGGGAGGAGTTATTGGCAAAAAGAGCCCGTTTAAGGTCGTTTATCGTGAACCGT
TACACCATGTCTACAAATGATGGGCTTCATCTGTCATAATCGTCATCAAATGGATCAAAGTTGTCAACCGAAGTTTTTTT
TTTGCAAAAGATTAAGTCAAAAATCTGTGGTTTCTGGCAAAAAATCGCATACCGGAGTTTTATGCAAACTTAGGCATCAA
TGTGGTGGTTTTATGCAATTCACTCCATGTATTGTATGTATTCTTAGCAAATCCAGCACGCACACCCTGTGAACCGTATG
ATGAAAATGTTTCAAATATCTGTGAACTAATTGGCAAGTCAAACCGCCATGGCCGAACCGAATTAATCCACACCTCGCCG
AGCGTACAGATCCACGGCCATTAGCTGCACGAGGTCGAGCTTAGCCCTAGATAGCTTTCCGTCGAAGCAAGGGCCAGCGC
ACGTACGGGAGGTCGGCGTAGGCCATGCAACAGAAACCAAACATATATT--ATATCCAACCTAT----------------
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----------------------------------------------------------CAGTGCTAGCCACTCCATTACC
ATACCAGCATCGACATGATCTTCACTTGTTA--ATATATTGTCAGCACCGGCCGGGCTCCGGCGACCATACCGGTCGGGC
GCCACTTCGGAGTTCGCCGGC------------CGTCTTATCG--CACGCTGGGGCCGGTGG------TTGGTGGAACCC
GCGGAAAGTGCACTGGACAACGGAA-AAACGACCTAGCAACGACTACC-AACCGATCTGATATGCTTTATCTCGAGGGTG
CACGTCGCTGTAGTGCT--------------------------------------ACACCAGTTTCGTACGGGCTCTTCA
AGCACACGCCTATATAAACCAGCCAGCTCCAGCTTGGAATGGGCATCCCATGCATTCAGCTCAGGCATTG----------
---AGATATCGAGCC--------TCAACC-----------TGCCGATCACTCGCAGGGCTGCCGTGGCATTTGCATTGAG
C----AGATCACTTGCTGT--AGA---TTGCAGGTACAGGTTCCTGAGCTTGCATGCGCATGGCAAAAGCTTGCATACTC
CGCGGTGTGGTGCTGGTCGTGTGCGCGCTCCTGCTTCTCTCCTCCCATTTCCTGGCGGCTGAGCCGGCTGGCCGGCAATG
GGATCACGGGAGAGG---CGCCACGGTGGCTGCGACGACCATGGCGA------GAGGCCGTTTTGCGAGGAAGGTGTTGC
GGGAGGAGATGGTCCAGGCG---------GACGGCGACGTTGACATTGCCGGCTCTAAGAGGAAGAGCCCCGGTGGCCCC
GATCCGCAGCATCATTAACGGGAGA-GAGGCCACGGTGGATGCAGTTTCTCTACAACAATATGTTTACCTGGCATCATAT
ACTCCTACATGGGACCTGAATCGCTAAATAGCCG----------------------------------------AAGAGA
T-GGTTTTGTATACCACGC-ATGTGTATACATG---------------------TTACAT-------ACATCATCTTTGA
TGTATATGTACGTACCATATGGTAGGAGAC---GCAGCACAAGTTTGTGGAACAGATCAAACTATTGTGACTAGTTTTCT
CAAAAGGAATAAATTTCAGTTTTCATCCA-CATTTAGCCACCCCTTTGCATAAATTTCAGTTCT-----GTGGGATTGTC
TATCATAGTCGGCGTCCAAAATTTATTTTAGTCTCCCTACCACACTCTAGTATTTGGACCAACAATTTTACATTTTGTGG
TCAACTTGTACATAAT---TTATACACCAGAACATTTACTCAACTACGGACTGAGCATAACTTAGATGGCTAGTT-GGGT
GGAACCTGCACATCTCGGTTAAGGTC---CTAGACTTG------------------------------------------
------------------------------------------------------------------TCACGGTTTGCCAG
ACTTTCCTAGGTTTATTTCAGGCTTTATGGTGCTACCCTTTCA-CCGTATGGTGTGTCCATTAACTACGATGCGTCTTTG
GTGACTTAGTCAATCTCAAGGCG-----CGGCTCGGTCTCCCAGAGATGCGTATACATGTACAATGAGTGTGTGAACATG
TATGTGAGCCTCCGTGTCTATACTCTGCTTCTCAAACAAACAAAAAACCATCG-----ACTTAGGTAAATACATACTTTC
AGGCCAAGTTGTGAGAGAGAAGTCATGGAAGTAGCCCATGGGCAGATCACT-GCCATTTTACTCTCTGTTAGTTCCTCTC
GCC-TTCAGCTCTCCACCTGACATCACCATCACTAAAAGTTGCGTCAAAGGGGCTTGGGGGTGAGCGTGGCGGCAACAAT
GATGGGGGGTGATGGGGGTTTTTATACACGCGAAGGTGGCACGCTCCAGCGGGAAACAGGGGCTGATTTCCCGCATGTTG
GTGGGAAATATGTGCTGATTTGCCGC
>chr1D_414
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-------------ACCGCCATTAGCTGCATGCTGTCGAGCTTAGAGTTAGATAGCTTTCCGTCGAACCAAGGGCCGGCGC
GCGCACGGGAGGTCGGCGCAGGCCATGCAGCGGAAACCTAACATATATACAATATCCGACCGAT----------------
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----------------------------------------------------------CAGTGCTAGCTACTCCATTACC
A-----GCATCAACATGATCCTCACTTGTTA--ATATCTTGTCAGCACCGCCCGGGCCCCGGCGACCATACCGGCCGGGC
ACCACTTCGGAGTTCGCCGGCCGGCCGGCCAGCCGTCTTATCG--CACGCTCTGGGGCCTTGTGGA--TTGGTGGAACCC
GCGGAAAGTGCACTGGACAACGGAA-AAACGACGTAGCAACGACTACCAAACCGATCTGATATGCTTTATCTCGCGGGTG
CACGTCGCTCTAGTGCT--------------------------------------ACACCAGTTTCGTACGG-CTCTTCA
GGCACACGCCTATATAAACCAGTCACCTCCAGCTTGGAATGGCAT-----CC---------CATGCATTG----------
---AGATATCGAGCGT-------TCCATC-----------TGTTGGTCACTCGCAAGGCTGCCGTGGCATCTGCGTTGAG
C----AGATCACTTGCTGT--AGA---TTGCAGGTACAGGTTCCTGAGCTTGCATGCGCATGGCCAAGGCTTGCGTACTC
CCCGGTGTGGTGCTTGTGGTGTTCGCGCTCCTGCTTCTCTCCTGCGCTTTCCTGGCGGCTGAGCCGGCTGGCCGGCAATG
GGATCAAGGGAGAGA---GGCCGCGATGAC---------CATGGCGAGAGCTCGAGGGCGTTTAGCGAGGAAGGTGTTGC
GGGAGGGGATGGTCCAGGCG---------GACGGCGACGGCGACATTGCCGGCTCTAAGAGGAAGAGCCCCGGTGGCTCC
GACCCGCAGCATCATTAACTGATGCCGAGGTCACGTTGCATGCAGTTTCTTTACA------------CCTGGCATCATAT
A------CATGGGACCTCAATCCCTAAATAGACG----------------------------------------AAGAGA
T-GATTTTGTATACCACGC-ATATGGACCATACGCATAGCCCGGCATCATATGTTTACAT-------ACATCATCTTTGA
TATATATGTACGTACCATATGCTAGGAGAC---GCAGCACAAGTTTGTGCAACAGATCAAAATGTTGTTACTTGTTTTCT
CATAAGGAATAAATTTCAATTTTCATCCA-CATTTGGCCACCCCTTTGCATAAGTTTCAGTTCT-----GTGGGATTGTC
TATCATAGTCGGTGTCCAACATTTATTTTAGTATCCTTACCACATTCTAGTATTTGGATCAACAATTTTAAATTCCGTGT
TCAACTTGTACATAAT---TTATGCACCAGAACATTTACTTAACTACGGACTGAGCATAACTTAGATGGCTAGTCAGGTT
GGAACCTGCACATCCGGGTTAAGGTC---CTAAACTTGGCATGGTTTGTCGCACTTTCCTAGGTTTATTTCAGTCTTTAT
GGTGCTACCCTTTCAGCGGTATGGTGTGTCCATCAACGGCGATGCGTCTGTGGTGACCTAGACTTAGCATGGTTTGTCGC
ACTTTCCTAGGTTTATTTCAGGCTTTCTGGTGCTACCCTTTCAGCAGTATGGTGTGTCCATCAACTACGATGCGTCTATG
GTGACTAAGTCAATCTCTAGAT-------GGCTCGGTCTCTTAGAGATGCTTATACACGTAGAATGAGTGTGTGAGCATG
TATATGAGCGTCCACGTCTATACTCAC-----------------------------------------------------
--ACCAAGTTGTGAGAGAGAAGTCATGGAAGTAGCCCATGGGCAGATCACTCGCCATTTTACTCTATGTCAGTTCCCCTC
GCCTTTCAGCTCTTCACCTGACATCACCATGACTAAAAGTTGCGCCGGAGGGGCTTGGGGGTGAGCATGGCAGCGACAAT
GATGGGGGCGATGGT-GGTTTATATACCCGCAAAGGGGGCATGCTCCAGCGGGAAACGGGGGCTGATTTCCCGCGTGTTA
GTGGGAAATGGGTGCTGATTCGCC--
>chr1A_449
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------------------------------------------------AGATAGCTTTCCGTCGAAGCAAGGGCCGGCGC
GCGTACGCGAGGTCGGCACAGGTCATGCAACGAAAACCTAACATATATACAATATCCGTCCGAT----------------
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----------------------------------------------------------CAGTGCTAGCTACTCCATTACC
T-----GCATCAACATGATCTTCACTT-TTA--ATATCTTGTCAGCACCGGCCGGGCCCA-GCGACCATACCGGCCGGGC
GCCACTTCGGAGTTCGCCGGCCGGCCAGCCGGCCGTCTTATCG--CACGCTCGGGCTGGTGGTGGA--TTGGTGGAACCC
GCGGAAAGTGTACTGGACAACAGGA-AAACGACCTAGCAACGACTACC-AACCGATCTGATATGCTTTATCTTGCGGGTG
CACGTCGTTGTAGTGCT--------------------------------------ACACCAGTTTCGTAGGG-CTCTTCA
GGCACACGTCTATATAAACCAGTCAACTCCAGCTTGGAATGGCAT-----CC---------CATGCATTCAGCTCAGGCA
TTGAGATATCGAGCG--------TCAATC-----------TGCTGATCACTC--------------GCATTTGCGTTGAG
C----AGATCACTTGCTGTGTAGA---TTGCAGGTACAGGTTCCTGAGCTTGCATGCGCATGGCCAAGGCTTGCCTACTC
CGCGGTGTGGGGCTGGTGGTGTGCGCACTCCTGCTTCTCTCGCCCTCTTTCATGGCGGCTGAGGCAACTGGCCGGAAATG
GGATCACGGGAGAGA---GGCCACGGTGGCCGTGATGCCGATGGCGG------GAGGGCATTTTGCGAGGAAGGTGTTGC
GGGAGGAGATGGTCCAGGCA---------GACGGCGACGTCGACATTGCCGGCTCTAAGAGGAAAAGCCCCGGTGGCCCA
GACCCTCAGCATCATTAAC-------------------------------------------------------------
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>chr1D_538
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-----------------------------------------------------------CCGAT----------------
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----------------------------------------------------------TAGTGCTAGCTACTCCATTACC
T-----GCATCCACATGACCTTTACTTGTTATTATCTCTGGCCAGCACCGGCCGAGCACCGGCGACCCTA----TCGCGC
ACCACTTCGGAGCTCGCCGGCAGGCCCGCC----GTCTTATCGCACAC---CGGGCCCGTGGATTAATTTGGTGGAACCC
ATGGAAAGTGCACACGACAAAGTC-------ACCTAGCAACGACTACC-AACCGATCTGATCTGATATCTTCTATCTCTT
-CGTGTGCACGTAGCTCTAGTGCTACACTAGCTACTTTCTTTTCTGGAAGATGCTACACTAGCTTTGTACGGGCTCTTCA
AGCACACGCCTATATAAACTAGCCACCTCCTGCTCGGAATGGCAT-----CG---------CATGCATTC----------
---TGGCATGCACCCAGCACATATCTATC-----------TACTCATCACTCGCAGAGTTGCCTTGGCATTTGCGTTGAG
CTAGAAGGTCACTTGCTGT--AGAATATTGCAGGT--AGGTTCCTGAGCTTGCACGCACATGGCCAAGGCTTGCGTACTC
CGCGGTGCCGTGCTGATGGTGTGCGCGCTCCTGCTTCTCTCGTCTGCTTTCGTGGCAGCTGAGCGGGCTGGCCAACAATG
GGATAATGGGAGAAA---GGCCACGGTGACGGCATCGACAATGGCGA------CAGGGCATTTGGTGAGGAAGGTGCTGC
GGGAGGAGGTGGTCCAGGCAA---ACAACGACGGTGTCGTCCACATTGGCGGCTCTAAGAGGAAGAGTCCCGGTGGCCCA
GACCCGCAGCATCATTAACTGAGGTCGAGGTCTCCTTGCATACAGTTTCTCT----------------------------
------ACATGGGACCTGAATCCCAAGATAGATTGATCGATCAAGTTTGTTTTCTTGTCTTGGTATAG---CGAAAGAGA
TGGTTTTCTTTCGCAAGCATATATGTATACATG---------------------TTACAT-------ACACCATATA---
---------------------GTAGGAGAC---GCAGCACAAGTTTGTGGAACAGATCAAA-TATTGTGACTCGTTTTCT
CGAAAGGAATACAATTTAATTTTTCGTCTGCATTTTGCCACCCCTTTGCACAAGATTCAGTTCT-----ATGGGATTGTC
TATCATAGTCGGTGTCCAAAGTTTACTTTTATCTCCCTGCGACATTCTAGTATTTGGATCAACAATTTTTCATTCCGTGG
TCATGTAGTACATAA-----TATACACCAGAACTTTTTGTTAACTGTGGAATGAGCATAGCTGAGATGGCTAGTAGTGGT
GGAACCTGCTCATC------------------------------------------------------------------
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>chr1A_538
CCTGTCAGCGCTAGCTACTCCATTGTCGGCATCCACATGATCTTCACTTGTTAATCGCTGGTCAGCACCGGCCGAGCCCC
AGCGACCCTATCGCGCACCACTCCGGAGTTCGCCGGCCGGCCGACCGTCTTATATATGGCACACCGGGCCGGTGGATTAA
TTTGGTGGAATCCATGGAAAGTGCACACAATGGCAGAAACGACCTAGCAACGACTACCAACCGATCTGATATGATATCTT
CTATCTCTCACGTGTGTAGGATAGATGCAAGTTTTGGTATTAGGAAGAAGAATACATCAATCAATTGATAGCACGAAATT
TGATAGATGCTTGTGCACTCTTGCTAGAATAGAGACTAGAGATGATATTAGATGTGAAGCAACGTCTATTTCTTTAAAAT
CGTAGAAGAAAGTAGTGTCCAAACTCAAGAAGCCACAGATCAAAAATGAAGACATAGAGATGATATTAATCCAATTAGTG
GGAGCAGTTATGAAAATTTAAGATGTAATATCTTTTAAAATGTCTAATTCTGATTCTTATTTTTTGGTCTTACTCTCCTA
GCAAAGAATTGGTGAATGTACTAACATGTATCAAAATGTTGTTGATGAAATAAAGAAATGTTTGGCAACAAAAATTATGC
ATACGTGCACCAGCCGACCGTGGTGGACCAAATGCGGCCGCGTGTTGGGCGCACAGCAGTGCATCACGAAAAACGGACGG
ACACCACCCCATTGCCATCCCTATACGGACGAAATCCGGACGAAACGCACGTCCGTTTGAGGTCGTGCGTTAGAGTTGGC
CTTATTACCCCATGTAGGTGGGCTAGGTTGACGGCGAGAGCCGTTAAAGCAAACTTTCTGTATCCGGTGTCCAGGTCCAG
GTTAATCACCCCTGTAACTGCGCGCACGTGGCACCGTCCTAGACGCCCTCCACACGTTATACGTACATGACGGGGTCAAT
AGTGTATTCGGCATTTTTTACTTCCATATTGAGCAGACAATAAGTGCTAGTACAGATCCTGATGCTTGGTTGTGAGGTTG
AGATATAGGGACCAACTTGACCCAGGAGCCAAAATGCCCCTCAAGCTCAGTGGCCTTTTTTTTTATAGGAGGTACGATTT
GTCAACTATACCATATAGAACTGCTGGCAAAACAAGGAAAGGACACCACCTTACTTTTATCGCTCAAGAGTCACGGTCGA
AGACCAAAAGAAAGGTAATGTACTACAAAATTGTCAGCAGAGCTCATAGAGAATTGTCCGCCACGAGCCAATTTGTTTCT
TCTATCAGCGTGCATCGTTAGGACCAGAAACCATATGCGTGCTGATATCACGGTGGCCATTAGCCAAGTGGACAGTTTGG
TTGGAATTGTATTTAGGTTACAACTGTCTGTCCAACTGAACTTTTGAGTGAGTGGCCAAGTGGACATTAAGTCCATGTCC
TGACTTACTTAAAAGAGAGAGAGGAGCTAGCCAATTTCATAGCAGCTAATTGTCCTAAGAGGCATCCATGTTTGCTTTGT
CGGCAAAGAGAAAAGTGTGATGGTCAGATTGATATGTAGAAAGTTCAAATTATCCTTATGGATATAGGATTTCTACTCAG
GCTAGTGGAGGAAAGAAATAAAGGGCATTAGTCTATTCTCCCCCAGGAGAGGTTGACAAAGTTGTACATATTTTGTGTAT
GAGTTTCCAGTGTGTACTAGTATTACTACGGACATAAAAGTTATTGTTCTTTTCCATTTGCATTTGGCCGGTATGTCCAT
AGCAATATCAATCCATATCATATACTTCATCCGTCCAAAAAAGATTGTCCCAAGTTTATTCTTTAAATGAGTGTATCTAA
CACTAACTTGGTGCTAGATATATCCGTTTGAGATACAAGCTTTCTTGAACGAAGAAAGTATGAAAGGAAAGGAAATCCGG
CCAGCCTGTGTGCTCAGGATCCACAACTCCACCAGAGCTTGCGTATTATCCTCGCACATGCATGCACGTCCAGCGTCCAC
CCACACAATCGACTGGAGGTCACCAGAACATATCCAGTGATACACACGCACATTTTTTTTTATCAAAACCCAGCACAAAC
CCTGTGGGCGTTTGGGTTGATTAATTCCGAGTGAAGATGTTGTTGAGATCTCAACTGATTGGTGAGTCAAACGACCAGGG
ACGCAATTAGTTAATCCAGACCTCCATGAACAGATACAGATGAACCAATCAGTGGTTGGATGGTTAGGAAGGAAGTGGTA
TCCGATGACATTAGTGTTTAACTCTTAAACTTGACATTGGTGCGAGTATTATTTTTGAGTTTATATGAGACTTCCGGCGA
TGTTCGTTCGGCGGGAGGAGACGTTCCCGTTAATTGCGAGGCGTGTGTGGTAACTTTATAAAATCTGAAGATGCTATGCC
AACTCAGTTTCTCAGAGGTGCTCATACTAATAGGGCATATGTGTGCGCGTTTATGGGATAAGTATATGCTCGTGTATGTG
AGCGACTTCCATTGTACGGTGTTAAAAAGAAGATGAACAGATCCAGCGCCATTACTCGCGCACCAGAAGGAGGTAGTTAC
CAGATGCACGTACGGGTGGTCGGCACAGACCGTGCAGCCAAAACCTGACATTTCCGATCAGTGCTGGCTACTCCATTACC
T-----GCATCCACATGAGCTTTACTTGTTA--ATCTCTGGTCAGCACCGGCCGAGCCCCGGCGACCCTA----TCGCGC
ACCACTTCGGACCGCGCTAGCCGGCCGGCC----GTCTTATTG--CAC---CGGGCCGGTGGATTAATTTGGTGGAACCC
AGGGAAAGTGCACACGACAAAGGAAGAAACGACGTAGCAACGACTACC-AACTGATCTGATCTGATGACTTCTATCTCTC
GCGTGTGCACGTCGCTCTAGTGCTACACTAGCTACTTTCTTTTCTGGAAGGTGCTACACCAGCTTGGTACGGGCTCTTCA
AGCACACGCCTATATAAACCAGCCACCTCCTGCTCGAAATAGCAT-----CG---------CATGCATTC----------
---TGGCATTCACCCAGCACATATCTATCTACTCATCACT---------CTCGCAGAGTTGCCGTGGCATTTGCGTTAAG
CTAGAAGGTCACTTGCTGT--AGAATATTGCAGGT--AGGTTCCTGAGATTGCAT----ATGGCCGAGGCTTGCGTACTC
CGTGGTGCCGCGCTGATTGTGTGCGTGCTCTTGCTCCTCTCGTCCTCATTCATTGCGGCTGAGCCGGCTGGCCGGCAATG
GGATCATGGGAGAAA---GGCCACGGTGGCGGCAATGACAATGGCGA------CAGGGCGTTTTGTGAGGAAGGTGCTGC
GGGAGGAGATGATCCAGGCG------------------------------------------------------------
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>chr1A_693
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----------------------------------------------------------------------GGTGGAACCC
ATGAAAAGTGCACAAGACAAAGGCAGAAACGACCTAGCAACGACTACC-AACCGATCTGATCTGATATCTTCTATCTCTC
GCGTGTGCACGTCGCTCTAGTGCTACACTAGCTACTTTCTTTTCTGGAAGGTGCTACACCAGCTTGGTACGGGCCCTTCA
AGCACACGCCTATATAAACCAGCCACCTCCTGCTCGAAATAGCAT-----CG---------CATGCATTC----------
---TGGCATTCACCCAGCACATATCTATCTACCTTAAGCTTGCTCATCACTCGCAGAGTTGCCCTGACATTTCGG-----
------GATCACTTGCTGT--AAAATATTGCAGGT--AGGTTCCTGAGCTTGCATGCGCATGGCCAAGGCTTGTGTACTC
CGCGGTGCCATGCTGATAGTGTGCACGCTCTTGCTTCTCTCGTCCTCTTTCATGGCGGCCGAGCCGGCTGGCCAACAATT
GGATCATGTGAGAAA---GGCCACGGTGGCGGCCACGACAATGGCGG------CAGGGCGTTTTGTGAGGAATGTTCTGC
GGGAGGAGGTTGTCCAGGCGGACGACGTCAATGGTGTCGTTGACATTGGCGACTCTAAGAGGAAGAGCCCCGGTGGCCCA
GACCCGCAGCATCATTAACTGAGGTCGAGGTCTCCTTGCATGCAGTTTCTCTACAAC-------------GGCATCATAT
A----TACATGGGTCCTGAATCCCAAGATAGATCGATCAATCAAGTTTGTGCTCTTGTCTTGATATAGTAGCGAAAGAGA
TGGTTTTGTTTCGCAAGCATATATGTATACATG---------------------TTACATGCATACTACACCATATA---
---------------------GTAGGAGAGAATGCAGCACAAGTTTGTGGAACAGATCAAA-TGTTGTGACTCGTTTTCT
CAAAGGGAATCATTT----TTTTGCGTCTGCATTTTGCCAACCCTTTGCACAAGATTCAGTTCAGTTCCATGAGAATGTC
TATCATAGTGGGTGTCCAAAATTTATTTTAGTCTCCCTGCCACACTCTGGTATTTAGATCAACAATTTTTCTATCCGTGG
TCAGCTTGTACATATTTTATTATACACCAGAACGTTTAGTTAACTGCAGA-----CAAAGCACAGATGGCTAGTTATGTT
GGAACCTGCTCATCTGAGTTAAGGTCGTCCTAGACATG------------------------------------------
------------------------------------------------------------------GCAAGGTTGGTCGC
AGTTTCTTAGGTTTATTTCAGGCTTTTGGGTGGTACTCTTTCAGCAGTATGGTGTCCCCGTCCACTATAAGGCGTCTAT-
GTGACTTAGCTAATCTCAAGATCTATATCGGGTAGGTCTCTTAGAGGTGCTTACAGG-GTAGAATGAATGCGTGTGCATG
TATGTAAGTGCCTGTGTCTATACTCTGTTTCTCCAAATAAAATAAAAACTCTTAGTTCACTTAACTAAAGACACACTTAC
AGACCAAGTAGTGAGAGAGAAGTCATGGAAGTGACCCATGAGC-GATCACTCGTCGTTTTACTCT--GTCCATTCCCCTC
ACC-TTCAACTCTTCAACTGACATTACCATAAA-AAAAGTTGTGCTGGAGAGGCTTGGGGTGA-----------------
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--------------------------
>chr1B_793
ACAAGTTTGTTGAACATATTATAATGTTTTGACTAATTTTCTCAAAGATTTTTTTTAAATTTTCATCCATTTATTGCCAC
CCCTTTGCATAAGCTTCAGTTCTGTCATAGCCGGTGTCCAAAATTTATTTTAGTCTCCCTGCCAGATTATAGTATTTGGG
TTAACAATTTTGCATTCCATGGTCAACTTGTACATAATTTATACACCAGAACTTTTAGTTAACTGCGGACTGATGAGGAT
AGCTTAGATGGCTACTAATGCTGGAACCTGCTCATCCGACACTGTTGGTCGCATTTTCCTAAATTTATTTTAGGCTTTCT
GGTGCTACTTTTTTAGCGGTATGGCCTGCTCGTCAACTACGAAAAGTCTGTTGTGACTTAGTCAATCTCAACTTCTATCC
GCTCGATATTCCAGAGATGCTTGGGTAGAATGAGTGTATGTGCATGTATGTGAGCATCTGCGTCAATACTCTGCTTCTCA
AAAAAATAGTTGACTTAGCTAAATGCTCACGTCCAGACCTAGTGAGATAGAAGTCATGGAAGTAGCCCATAGGCGAACCA
CTCATCGTTTTACTCTCAGTCAGTTCCCCTCGGCTTCAACTCTTCACGTGGCAATTGGCATCACCATAAAAAAATGTGAT
AGAGGGGCCTGGGGGTGAGTGTGGCGGCGACGGCGATGGAGGTGATGGGGGTTATATGCACACGAAGGGGCGCGCTCCAG
CAGGAGACAGGGTCGGATTTGCCCCACATCGGTGGAAATGGGTGTTGTTTTTCGTGTGCAGGTGCAAAACATGGCGCGGC
TATTAATTGGCGCTCTTCCCGTGGAAATGCGGCTGCATCATTAGCAGGACGAAAATGATAACCATTCGTATGGCCGCACC
ATTGACCAGGCTACGTGTGGAAGTATGAGGCCGGGTTAAAACTTCCCTCCCACACGAGCGATTGGCGGATGGCACGCTCC
AAGCCAGCATCCCTAGCCTCCAAATACAATGGCTCGTGAGCTAGATATGAAGCCCCTCCGTAAATTATGGTAACTTATGG
TCATATGGCGATCTGTTAGAGTGTGTTTTTAGGCCAGAATCATCGTATCAATGGTTATTATGCTTATTTGCCCGATATGG
TGACTCTCTAGATTTGCTCTAGTATCTCTCCATCTTATTTACAAACATTAATGTGGATGACCCATACTATAGTCTATTTA
TAAAAAGTCGAATTTCAAGTATAGCTACCTGTGAGAGAAAATTACCGTTTGTAAGTTGCCACCAGAATTTATGAAGATCT
AGATGGATTGTTCTAGTGGATTTATGGAAATTACAAGCTCAATGGCCTTTTGTACAGGTGGGGGTAATTGTCCACTACAC
ATAGAGAACTGCTGGCAAAACAAGGAAAGGACACCACCTTACTTTTATCGCTCAAGAGTCACGATCGAAGACCAAAAGGT
AATTCACTACAAAATTGTCAGCAGAGCTCATACAGAATTGTCCACCACTAGCTAATTTCTTTCTCCTATCATCATGGCTT
GTTAGGACCATCAACCGTATGCGTACTGATATCGCGGTGGCCATTAGCCAAGTGGACAGTTTGGTTGGACATGAATTCAG
GTTACAACTGACTGTCCAGCTGAACTTGTGAGTAAGTGGCCAAGTGGACTTTAAGCCTCTGATGTGACTTACTTAAAAGA
GAGAGAGAAGAGCTAGCCAATTAGTAGCGGCTAATTGGCCTAAGAGGCGGCCATGTTGCTTTGTCGGAAAAAGAAAAGTG
TGATGGTCAGATACTCAGATAGATATGTAGAAAGCTCAAACTATCTTTCTGGATATAGGATTTCTACTCGGGTTAGTGGA
GGAAAGAAATACAGGGCAATAGTCTATTCTCCACCAGGAGAGGTTGACAAAGTTGTAGTACATATTTTGTGTATGAATTT
CCAGTGTACCAGCATTACTAGGGGCATAAAAGTTATTGTACTTTTCCGTTTTCATTTGGCAGGTTTGTCCATATATAACA
ATATCAATCCATATTTTATGTAAGAAAAGGAAATCCAGCCTGTGTGCTCAGCATCCACAACTCCGCGAGTGCTTGCTGAA
TATCCTCGCACATGCATGCACAAGAAAACAGCACAAACCTTGTGGGCGTTTGGGTCGATTAATTCCTGGTGAAAATGTTG
TTGAGATCTCAACTGATTGCTAAATCAAACGACCGGCGTCATTAGTCGCAGAAGATCGATCCTAGTGATACGAAATGATA
GCTTTCCGTCGAAGCAAGGGCGGGCGCACCACAAGGAGCTGGCCAGCGGATGCGCGTACGGGTGGTCGGCACAGGCCATG
CAGCAAAAACCCAACATTTCCGATCAGAGTTAGCTACTCCATTACCTGCATACACATGAGCTTTACTTGTTAATCTCTGG
TCAGCACCGGCCGAGCCCCGGCGAGCCTATCGGGCACCACTTCGGAGCTCACCGGCCAGCCGGCCGTCTTATGGCACACC
GGGCCGGTGGATTAATTTGGTCGAACCCAAGGAAAGTGCACCAAGTCAAAAAATAATAATGACCTAGCAACGACTACCAA
CTGATTTGATCTG-------------------------------------------------------------------
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----------------------------------------------------------------ATATCTTCTATCTCTC
GCGTGTGCACGTCGCTCTAGTGCTACACTAGCTACTTTCTTTTCTGGAAGGTGCTACACTAGCTTTGTACGTGCTCTTCA
AGCACACGCCTATATAAACCAGCCACCTCCTGCTCGAAATAGCAT-----CG---------CATGCATTC----------
---TGGCATTCACCCGGCACATATCTATCTAC------CTTGCTCATCACTCGCAGAGTTGCCGTGACATTCG-------
-----AGATCACTTGCTGT--AGAATATTGCTGGT--AGGTTCCTGAGCTTGCATGGGCATGGCCAAGGCTTGCGTACTC
CGCTGTGCCGTGCTGATGGTGTGCACGCTTTTGCTTCTCTCGTCCTCTTTCATGGCGGCTGAGACGGCTGGCCGACAATG
GGATCATGGGACAAA---GGCCACGGTGGCGGCAACGACAATGGCGA------CAGGACGTTTTGTGAGGAAGTTGCTGC
GGGAGGAGGTGGTCGAGGTGGACGAT---GAAGGTGTCGTTGACATTGGCGGCTCTAAGAGGAAGAGCCCCGGTGGCCCA
GACCCGCAGCATCATTAACTGAGGTCGTGGTCTCCTTGCATGCAGTTTCTCTACAAC-------------GGCATCATAT
A------CGTGGGACCTGAATCCCAAGATAGATTGATCGATCAAGTTTGTGTTCTTGTCTTGATATAA---CGAAAGAGA
T-GTTTTGTTTCGCAAGCATATATGTATACATG---------------------TTACAT-------ACACCATATA---
---------------------GAAGGAGAC---GCATCACAAGTTTGTGGAACAGATCAAA-TGTTGTGACTAGTTTTTT
CGAAAGTAATAAAATTTAATTTTTCGCCTGCATATTGCCACCCTTTTGAACTAGATTT----------------------
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>chr1B_793
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------------GTGCT--------------------------------------ACAATAGCTTCGTACAGGCTCTTCA
AGCACACGCCTATATAAACCCGCCACCTCCTGCTCGGAATGGCATCGCATCG---------CATGCATTC----------
---TGGCATTCACCCACCACATATCTGTCTACTCGA-------TCATCACTCGCAGAGTTGCCGTGGCATTTGCGTTGAG
CTAGAAGATCACTTGCTGT--AGAATATTGCAGGT--AGGTTCCTGAGCTTGCATGCGCATGGCCAAGGCTTGCGTACTC
CGAGGTGCCGCGCTGATGGTGTGCACGCTCTTGCTTCTCTCGTCCTCTTTCATTGTGGTTGAGCCGGCTGGCCGACAATG
GGATCATGGTACAAATAAGGCCGCGGTGGCGGCAATGACAGTGGCAA------CAGGGCGTTTTGTGAGGAAGGTGCTGC
GGGAGGAGGTGATCGAGGTGGACG---ACGACGGTGTCGTCGACATTGGCGGCTCTAAGAGGAAGAGCCCTGGTGGCCCA
GACCCACAACATCATTAACTGAGGTCGAGGTCTCCTTGCATGCAGTTTCTCTACAAC-------------GGCATCATAT
A------GATGGGACCTGAATCCCAAGATAGATCGATCCATCTAGTTTGTGCTCTTGTCTAGATATAG---CGAAAGAGA
TGGTTTTGTTTCCCAAGCATATATGTATACATG---------------------TTACAT-------ACACCATATA---
---------------------GTAGGAGAC---GCAGCACAAGTTTGTGGAACAGATCAAA-TGTTGTGACCCGTTTTCT
CAAATGGAATAAAATTTATTTTTTCGTCTGCATTGTGCCACCCCTTTGCACAAGATTCAGTTCA-----ATGGGATTGTC
TATCATAGTCGGTGTCCAAAGTTTAGTTTTATCTCCCTGCGACATTCTTGTATTTGGATCAACAATTTTTCATTCCGTGG
TCATCTAGTACATAA-----TATACACCAGAACTTTTTGTTAACTGCGGAATGAGGATGGCTTGGATGGCTAGT------
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>SNPs
SS-S-S-S--SSS-S--SS-SS--S-S--S-SSSSS-S--SS----S-SSSSSSS-SS-S-S----SS--SSS--S--SS
SS-SS-SSS-SSS-SS-S---SS-SSSS---S-SSS-SSS-SSSS-SSSS-S---SSSSSSSSS--SS-S-SSS----SS
-------S-SSSS-S-S---SSSSSSS-S--SS---SS-S---S-----S--SSS-SS--S-SSSSSSS--S-SS----S
S-SSS--S-SSSSSSS---S-SSSSSSSSSS--S-SS-SS-SSS---S-S-SSSSSSS-SS-S-SSS-S------S---S
SSSS-S------SS-SSS---SS-S-SS-SSSS-S-SSS-S--SS-S-SS-SSS---SSS--SS-S-S--SSSS-SSS-S
S-SSS-S-S-S-S----------------S-SS-----------SSS----------------------------S----
-------------------------------S-------------------------S----------------------
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--------------------------------------------------------------------S-----------
-SSSSS-----S-------------------------S-------------------S----------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------S-----
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-------------------------S----------------SSSSS-SSS-SSSSSSSSS--S----------------
---------------------------S---------------S------------------------------S-----
----------------------------------------------------------------S--S------S-----
-----------------S---------------------------SS---------------------------------
--------------S---S-----------S--------------------------S----------------------
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--S----------------S-SS-S-----S----S--S------------------SSSSSSSSSS-------------
-SSSS-----------------S--------S------------------------------------------------
---S------------------S---------------------------------------------------------
-S-----------------------------------------------------------S------------------
------------------S----------------S-----------------S--------------------------
------------S---------------------------------------------S---------------SS----
----------------------------------------S---------------------------------------
---------------S----------------------------------------------------------------
------------------------------------------------------------------S--S------S-SS
--------------------------S------------------S---------------S---------------S--
--------------------SSS-----------------SS--------S------S---S-------------S----
---------S-----------------S-----S--SS--S-S----S-SSSS----------SS----S---S----S-
--S--------------------------------------------------------------S---S------S---
-------------S----------------S-------------S-SS------------------S----S--S-----
--------SSSSS-SS-----S-----S---S----S----S---------------S----------------S----S
---------SS---------S---SS
>forward_3084
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------------------------ATATCGAGCCTCAACCTGCC------------------------------------
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>reverse_4582
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---------------------TTATACACGCGAAGGTGGCA---------------------------------------
--------------------------
