>input_sequence_85514
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATGGACAGCGGCAACGACGGCAACGACA
ACGGCGGCGGCGGGATCCTG---------------GAGGGGTACAGGATCTGGATGGGCGCGAGCGTGGTCGTGGCATTC
TTCATCTCCATGGAACGGTTCTCCTGCATTCACATCCACACCATGGACGACGAGGATGACTACGACCCTGAGGAGGCCAA
GGATCGCCCCCTCATGCTCTCCCGCCCCCAGGCCCTCCCCGAGTACTACTACGACCGATCCGGGTCCTCCGCCTCCTTCG
CCAAGATGTGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr1A_1_TraesCS1A01G172800
CCATCCATCTTGCCACATCAAACAGATGACATCAGCAGAATCGTTTTGGTTTTTTGAATTAAAAATCCATTTTCATCATT
AAATCCTTCTCAGTGGGATCTTCGAAACTAGATCCCAT----ATTGATATGTTTCGACGACTTTTTTTGGGGGGGAGGGC
AA----------------------------------------A-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------AAGTTGTCATGATGTTTACACTTAAGTTGCCA--
--------------TAACCACGGCAAATTTAATTCATGGATCATAGCAAATTTTGGTAATTCATCATGGCAAATTTAGTT
TATACATCATGTCAATTTTAGTA-TTT-----------------------TGACCATGAAAATTATTTTTTGTATGGACC
ATGGCAAATTTTA-GTGCATGTATCACGTCAAATTTAAGTACTTCACCATGGCCATTTCATTTTATGGTTCATGGCAAAT
TTGAGTCATTGATCATGCATTTTTGAAGTAATTGACGACGGATTTAT-TTTTAATTATGAACCATGTCAAAATTATTTCA
TGGATCATGGCAAATTTTAGTAATTCACCATGGCAAGTTTAGTTTATTAAT---TCCCTTTT-TTATAAT--GTCAAAAT
TTAATTTAAACGTAGTAGAAAAGGTAATTGAAACATATCATGGC-AAGTTCAGTGTAAACACCATGGCAATTTATGTGCA
ATGCACATGGCAACTTTTACA----AAAAAAA-GTCGTCAAAACATATCGATATGAGATCTAGTTTCGAAGATCTTGTCG
TGACGGATTTAATGGTGAAAACGAATTTTCAAACAAAATTTTTA-TTTAAGAGATAAAACATTTTAAAAACTGGAAACCT
AAAAGGATTTCTACATGCATGCATGCGGTGACATGGCAATCTGTTG--CTATAAGAACGTTTGAT---------------
---------------------------------------------CAGGACGGTTCGTCTTCTCCTAGACTCCCTCCATC
CCGCCCCTCCCAATTTTGGCACACAGCCAAAACAATCCCAGAAAAATTCAA--AGACAACGCAAGAACTAGCCGCTGATT
CCACCCCATTCCCCTCT------TTCCTTCGGGTCTTCGTCGGACGGCAACCATGGACAGCGGCAACGACGGCAACGACA
ACGGCGGCGGCGGGATCCTG---------------GAGGGGTACAGGATCTGGATGGGCGCGAGCGTGGTCGTGGCATTC
TTCATCTCCATGGAACGGTTCTCCTGCATTCACATCCACACCATGGACGACGAGGATGACTACGACCCTGAGGAGGCCAA
GGATCGCCCCCTCATGCTCTCCCGCCCCCAGGCCCTCCCCGAGTACTACTACGACCGATCCGGGTCCTCCGCCTCCTTCG
CCAAGATGTGAACAGGTCCTGGCCCGTATTGGGATCA----TATTGCTATTTCTTTGACCTGTTTATTGATTAGA---AT
TTTTGTGTGTGTTGTTTTGTGATTCATTCAGCCGCGCCATGATCTGATTGTGTCG-TCGTGTGAGGTGTTCAAGAAATAT
AGCCCTGCATTCTTCATGTGTGATTCGAACGGCCGATTAATCTTTCAATTTTGTACCATCTATTCACGAATCTTCTATTA
ATTTGATTCCAAGACGGTCATATTAATCCTGTTTTACATATTTCTGGCATTCTTTTTCCAAAGGAGTGGAGCTAATGCAC
ATGTAATTTGGACATGCAGCACCATG--TTTCTGATAGTTCTAACACTTAGCTGGAGCCCGAATCTTATTAGTTTCAGAT
TATGTTTCTGCACGAATAATTCGTTTCAGATGTTTGGAGAGAAAATTGGCCCTGGTAGTTGTTTCCGTATCTCAAGTTTA
TTCCCTTTATTCCCCAATCTGCAAGGCTGCAATTGTCTACTTCTTTTTTCAACCTTACATTTGGTAAATTTGCAACTATA
TATAGCGTCTGTAAACCGTTGCAACTATAGGTTTTGTGCAGCACCTTTTGATTTTCATCATTTGGTAAGTAGTTTATTCG
GCTTGCTAAATCTTGTGAAATATTCAAAATCGGTTGTTGGACAACCGTGCAAC---------------------------
-----------TTGTTTCAAATTATCAAATTAGTTCGGAGCGTGATTTTT-ATGTTTGCAATGGGATTTTGAGTTGTGTT
GCATTATGCAGAACATGATGGCACTAGCACAGGAGAAGTTGTGATGATTGAGAGCATATTATGGCAGGTGGCGAGT----
-GAGGTGCTCGGTTAAGCAGAAGGCACGGTCATCGAATTTTGACGATTGACGACTAACTTTGATTGGGAAGGAAGATCTG
TGGAGAAAAAAATGAATGTAACTAGCTACTGCGTGCTATGTGCTGTGGTCGAATTAGGCCATATGCCTTGGATGTCCGTT
CTTTTCTTCTTTCTAATTTCGCTTC
>chr1D_2
-CATCCATCTTGCCACATCAAACAGATGACATCAATATAATCATCTTGGTTTTTTGGATTAAAAATATGTTTTCATCATT
AAATCCTTCTCGATGGGATCTTCAAAACTAGATCCCATATTGATTGATATGTTTCGATGGCTTTTTTGGGGGGCAAAAAG
TTGTCATGATGTTTACACTGAAGTTGCCATAGTGATTACACTA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------AAGTTGCCATGCAATTTTTATTAATTGACCATGG
AAATTTTTAGTAATTAACCACGGCAAATTTAATTCATGGATCATGGCAACTTTTAGTAATTCATCATGGCAAATTTAGTT
TATACATCATGACAATTTTAGTA-TTT-----------------------TGACCATGAAAATTATTTTTTGTATGGA-C
ATGGCAAATTTTA-GTGCATGTATCACGGCAAATTTAAGTACTTCATCATGCCAATTTCATTTTATGGTTCATGGCAAAT
TTGAGTCATTGATCATGCATTTTTGAAGTAATTGACGACATATTTCT-TTTTAATTATGAACCATGTCAAAATTATTTCA
TGGATCATGGCAAATTTTACTAATTCAAAATGGCAAGTTTAGTTTCTTAAT---TCCCTTCT-TTATAATATCTCAAAAT
TTACTTTAAAAATAGAAGAAAAGGTAGTTGAAACATATCATGGC-AAGTTTAGTGTAAACACCATGACAATTTATGTGCA
ATACACATGGAAACTTTA------CAAAAAAA-GTCGTCAAAACATATCTATATGAGATCTAGTTTCGAAGATCTCATCG
CGACGGATTTAATGGTGAAAACAGATTTTCAATCGGATTTTTCA-TTTAAGAGGTAAAACATTTTAAAAACTGGAAAACC
AAAAGGATTTTCACATGCATGCATGTGGTGACATGGCAATATGTTG--CTACAAGAACGTTTGAA-CGCCTTCCTCCTTG
CTGCCGCACGTGTGGCAAATATGAGTGTCCAAAAACTAACCATGACAGGATGGTTCGTCTTCTCATAGACTCCCTCCCTC
CCGGCCCTCCCAATTTTGGCACACAGCCAAAACAGCCCCAGAAAAATCCAA--AGACAACGCAAGAATTAGCCGCTGATT
CCACCCTATTCCCCTCT------TTCCTTCCGGTCTTCGTCGGACGGCAACCATGGACAGTGGCAACGACGGCAACGATA
ATGGCGGCGGCGGGATCCTG---------------GAGGGGTACAGGCTCTGGATGGGCGCGAGCGTGGCCGCGGCGTTC
TTCATCTCCATGGAACGGTTCTCCTGCATTCACATCCACACCGTGGACGACGAGGATGACTACGACCCTGAGGAGGCCAA
GGATCGCCCCCTCATGCTCTCCCGCCCCCAGGCCCTCCCTGAGTACTACTACGACCGATCTGGGTGCTCCGCGTCCTTCA
CCAAGATGTGAACAGGTCCTGGCCCGTATTGGGATC----GCATTGCTATTTCTTTGATCTGTTTATTGATTAGA---AT
TTTTGTGTGTGTTGTTTTGTGATTCATTCATCCGCGTCATGATCTGATTGTGTCG-TCGTGTGAGGTGTTCAAGAAATAT
AGCCCCGCATTCTTCATGCGTGATTCGAACGGCCGATTAATCTTTCAATTTTGTACCATCTATTCGCGGATCTTCTATTA
ATTTGATTCCAAGACGGTCATATTAATCCTGTTTTACATATTTATGGCATTGTTTTTCCAAAGGGGTGGAGCTAATGCAC
ATGTAATTTGGACATGCGGCACCAT--ATTTCTGATAGTTCTAACACTTAGCTGGAGCCAGAATCTTATTAGTTTCAGAT
TATGTTTCTGCGCGGATAATTCGTT-CAGATGTGTGGAGAGAAAATTGGCGCTGGTAGTTATTTCCGTATCTCAAGTTTA
TTCCC---------CAATCTGCAAGGCTGCAACTGTCTACTTCTTTTATCAACCTTACATTTGGTAAATTTGCAACTATA
TATAGCTTCTGTAAACCGTTGCAACTATAGGTTTTGTGCAGCACCTTTCGAATTTCATCATTTGGTAAGTAGTTTATTCG
GCTTGGTAAATCTTGTGAAATATTCAAAATCGGTTGTTGGACAACCATGCAACTATAC----------------------
-----TTATTTTTGTTTCAAATTATCAAATTAGTTCGGAGCGTGATTTTTCATGTTTGCAATGGGATTTTGAGTTGTGTT
GCATTATGCAGAACGTGATGGCACTAGCACAAGATATGTTGTGATGATTGAGAGCATATTATGACAGGTGGCGAGT----
-GAGGTGTTCGGTCAAGCAGAAGGCACGGTTATCGAATTTTGACGATTGACGACTAACTTTGATTGGGAAGGAAGATCTG
TGGAGAAAAAAATGAATGTAACTAGCTACTGCGTGCTATGTGCTGTGGTCGAATTAGGCCATATGCCTTGGATGTCTGTT
CTTTTCTTCTTTCTAATTTCGCTTC
>chr1B_2
-CATCCATCTTGCCACATCAAACAGATGACATCAATAG------TTTGGTTTTTCGGATTAAAAATACGTTTTCATCATT
AGATC-----------------------------CCAT----ATTGATATGTTTCGATAGATTTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTTGCCATGCAATTTTCATTAATTGACCATGG
AAATTTTTAGTAATTAACCACAACAAATTTAATTCATGGATCATGGCAACTTTAAGTAATTCATCATGGCAAATTTAGTT
TATACATCATGCCAATTTTAGTA-TTT-----------------------TGACCATAAAAATTATTTTTTGTGTGGA-C
ATGGCAAATTTTA-GTGCATGTATCATGGCAAATTTAAGTACTTCACCATGCCAATTTCATTTTATGGTTCATGGCAAAT
TTGAGTCATTGATCATGCATTTTTGAAGTAATTGACGACATATTTC--TTTTAATTATGAACCATGTCAAAATTATTTCA
TGGATCATGGCAAATTTTACTAATTCAAAATGGAAAGTTTAGTTTTTTAAT---TCCCTTTT-TTATAATATGTCAAAAT
TTACTTTAAAAATAGAAGAAAAGGTAGTTGAAACATGTCATGGC-AAGTTCAGTGTAAACACCATGATAATTT-TGTGCC
ATACACATGAAAACTTTTACA-----AAAAAA-GTCGTCAAAAC--ATCTATATGAGATCTAGTTTCGAAGATCTCGTCA
CGAGGGATTTAATGATGAAAACAGATTTTTGATCGGGTTTTTTA-TTTAAGAGATAAAACATTTTAAAAACTGGAAAACC
AAAAGGATTTTCACATGCATGCATGTGGTGACATGGTAATATGTTG--CTACAAGAACGTTTGATCCGCCTTTCTTCTTG
CTGCCGCACGTGTGGCAAATATCAGCGTCCAAAAACTAACAATGACAGGACAGTTCGTCTTCTCCTAGACTCCCTCCCTC
CCACCCCTCCCAATTTTGGCACACAGCCAAAACAGCCCCAAAAAAATCCAA--AGACAACGCAAGAATTAGCCGCTGATT
CCACCCTATTCCCTTCT------TTCCTTCCGGTCTTTGTCGGACGGCAACCATGGACAGTGGCAACGACGGCAACGATA
ATGGTGGCGGCGGGATCCTA---------------GAGGGGTACAGGCTTTGGATGGGCGCGAGCGTGGCCGCGGCGTTC
TTCATCTCCATGGAACGGTTCTCCTGCATTCACATCCACACCGTGGACGACGAGGATGACTACGACCCTGAGGAGGCCAA
GGATCGCCCCCTCATGCTCTCCCGCCCCCAGGCCCTCTCCGAGTACTACTACGACCGATCTGGGTCCTCCGCCTCCTTCA
CCAAGATGTGAACAGGTCCTGGCCCGTATTGGGATC----GTATTGCTATTTCTTTGATCTATTTATTGATTAGT---TT
TTTTGTGTGTGTTG-TTTGTGATTCATTCATCCGCGTCATGATCTGATTGTGTCG-TCGTGTGAGGTGTTCAAGAAATAT
AGCCCTGCATTCTTCATGCGTGATTCGAACGGCCCATTAATCTTTCAATTTTGTACCATCTATTCGTGGATCTTCTATTA
ATTTGATTCCAAGACGGTCATATTAATCCTCTTTTACATATTTATGGCATTGTTTTTCCAAAGGAGTGGAGCTAATGCAC
ATGTAATTTGGACATGCGGCACCAT--ATTTCTGATAGTTCTGACAATTAGTTGGAGCCCGAATCTTATTAGTTTCAGAT
TATATTTCTGCGCGAATAATTCGTT-CAGATGTGTGAAGAGAAAATTGGCGCTGGTAGTTGTTTCTGTATCTCAAGTTTA
TTCCCTTTATCCCCCAATCTGCAAGGCTGCAATTGTCTACTTCTTTTTTCAACCTAACATTTGGTAAATTTGCAACTACA
TATAGCTTCTGTAAACCGTTGCAACTATAGGTTTTGCGCAGCACCTTTCGATTTTCATCATTTGGTAAGTAGTTTATTCG
GCTTGGTAAATCTTGTGAAATATTCAAAATCGGTTGTTGGACAACCGTGCCACTATACTTATTTTTGTTTCAAATTATCA
AATTATTATTTTTGTTTCAAATTATCAAATTAGTTCGGAGCGTGG-TTTTCATGTTTGCAATGGGATTTTGAGTTGTGTT
GCATTATGCAGAACGTGATGGCACTAGCACAAGATATGTTGTGATGATTGAGAGCATATTATGGCAGGTGGCGAGTGACT
CGAGGTGTTCGGTCAAGCAGAAGGCACGGTCATCGAATTTTGACGATTGACGACAAACTTTGATTGGAAAGGAAGATCTC
TCGAGAAAAAAATGAATGTAACTAGCTACTGCGTGCTATGTGCTGTGGTCGAATTAGGCCATATGCCTTGGATGTCTGTT
CTTTTCTTCTTTCTAATTTCGCTTC
>chr1A_192
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TAACCACGAGAAACTTAATTCATGGATCATGGCAATTTTTAGTAATTCATCATGGCAAATTTAATT
TATAGATCATGTCAATTTTAGTA-TTT-----------------------TGACCATGGAAACTATTTTTTGTATAAACC
ATGACAAATTTTA-GTGCATGTATAATGGCAAATTTAAGTAATTCGCCATAGCAATTTTAGTTTCTGGTTCATAGCAAAT
TTGAGTAATTGACTATGCATTTTTAAAGTAATTGATGACGAATTTATTTTTAG-TTATGAACCATGTCAAAATTATTTCA
TGGATCATGGCAAATTTTAGTAATTCTCCATGGCAAGTTTAGTTTCTTGAT---TTCCTTTTCTTGTAACATGTCAAAAT
TTACTTTGAACGTCGAAGAATAAATAGTTAAAGCATATCATGGC-AACTTCGGTGTAAATACCATGGCAGTTTATGTGCA
ATAGACATGGCAACTTTTCACCGT-AAAAAAT-ATCGTCGAAACATATCGATATGGGATCTAGTTTCGAAGTCCTCGTCG
CGGCGGATTTAATGGTGAAAATGAATTTTCAATCGGATTTTTCA-TTTAAGAGATAAAACATTTTAAAGTTTGAAATCCC
AAAAGATTTC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr5A_192
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TAACCACGACAAATTTAATTTGTGGATCATGGCAATGTTTAGTAATTCATCATGGCAAGTTTAGTT
TATAAATCATGGCAATTTTAGTA-TTT-----------------------TGACCATGAAAATTATTTTTTGTATGAACC
ATGGAAAATTTTA-GTGCATGTATCATGTCTAATTTATGTAAATCACCATTGCAATTTTAGTTTCTGGTTCATGGAAAAT
TTGAATCATTGACCATGCATTTT-AAAGGAATTGACGAGGAATTTCTTTTTAA-TTATGAACCATGTCAAAAAAATTTCA
TGGAGCATGGCAAATTTTAGCAATTCACCATGGCAAGTTTAGCTTCTTAAT---TCCCTTTTCG-ATAACATGTCAAAAT
TTACTTTAAATGTAGAAGAAAAAGTAGTTGAAGCATATTATGGC-AACTTTAGTGTAAATACCATGGCAATTTATGTGCA
ATGGACATGGCAACTTTTGACCGCCAAAAAAT-ATCGTCGAAACATATCGATATGAGATCTAGTTTTGAAGTCTTTGTCG
TGGCGGATTTAATTGTGAAAATGAATTTTCAATCAGATTTTTTA-TTTAAGAGATAAAACATTTTAAAGTTTGAAAACCC
AAAAGATTTC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr4B_192
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TAACCACGACAAATTTAATTCATGGGTCATGGCAGTTTTTAGTAATTCATTATGGCAAATTTAGTT
CATAGATCATGGCAATTTTAGTATTTT-----------------------TGACCATGGAAATTATTTTTTGTATGAACC
ATGGCAAAATTTA-GTGCATGTATCATGGCAAATTTAAGCAATCCATCATGGCAATTTTAGTTTATGGTTCATGGCAAAT
ATGAGTCATTGACCATGCATTTTTAAAGTAATTGACAATGGATTTATTTTTAATTTATGAACCATGTCAAAATTATTTCA
TGAATGACGGCAAATTTTAGTAATTCACCATGGCAAGTTTAGTTTCTTAAT---TCTCTATT-TTATAACATGTCAAAAT
TTACTTTAAATGTAAAAGAAAAGGTAGTTGAAACATATAATGGC-AATTTCAGTGTAAACACCATGGCA---TATGTGCA
ATAGACATGGCAACTTTTAACCC---AAAAAA-ATCGTCGAAACATATCGATACATGATCTAGTTTTGAAGATCCCGTCG
CAACAGATTTAATGATGATAAGAGTTTTCAAATTGTAATTTTCA-TTTAAGAGATAAAACATTTTAAAAACT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr4B_192
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TAACCACGGCAAATTTAATTCATGGGTCATGGCAATTTTTAGTAATTCATCATGGTAAATTTAGTT
TATAGATCATGTGAATTTTAGT-----------------------TTTTTTGACCATGGGAATTAGTTTTTGTATGAACC
ATGACAAAATTTA-GTGCATGTATCATGCCAAATTTAAGTAATTCACTATAGCAATTTTAATTTATGGTTCATGATAAAT
TTGAATCATTGACCATGCATTTTTAAAGTAATTGACGACATATTTCTTTTTAA-TTATAAACCATGTCAAAATTATTTTA
TGGATTATGGCAAATTTTAGTAATTCACCATGGCAAGTATAGTTTCTTAAT---TCCCCATT-TTATAAGATGTCAAAAT
TTACTTTAAACGTAGAAGAC-AAGTAGTTGAAGCATATCATGGG-AATTTTAGTGTAAACATCATGGTAATTTATGTACA
ATAGACATGGCAACTTTTAAGC-T-AAAAAAA-GTCGTCGAAACATATCGATATGAGATCTAGTTTCAAAGATATCGTTG
CGACGAATTTAATGATGAAAACAGTTTTTCAATCGGATTTTTTA-TTTAAAAGATAAAATATTTTAAAAACTGAAAATCC
GAAAGATTCCTAC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr1A_196
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CATGGCAAATTTAGTTTATAGATCATG-----------------------GCAATTTTAGTT
TATAGATCATGACAATTTTAGTATTTTGACCATAGCAATTTCCAGTTTTCTGACTATGAAAATTATTTTTTGTCTGGACC
ATGGC-AAATTTT-GTGCATGTATCATGGCAAATTTAAGTAATTCAACATGGAAATTTTATTTTATGGTTCATGACAAAT
TTAAGTCACTGACCATGCATTTTTAAAGTAATTGACGATGGGTTTCTTTTTAA-TTATGAGCCATGTCAAACTTATTTCA
TGGATCATGCCAAATTTTAGTAATTCACCATGGCAAGTTTAGTTTCATAAT---TTCCTTTT-TCATAATATGTCAAAAT
TTACTTTAGACGTACAAGAAAAGGCCGTTGAAACATATGATGGC-AAATTCAATGTAAACACCATGTCAATTTATGTGCA
ATAGACATGAAAACTTTTAAA-----CAAAAAAGTAGTCGAAACATATCTATATGAAATCTAGTTTCGAAGATCTCAGCG
CGATGAATTTAATGGTGAAAACGGATTTTTAATCGG-ATTTTTA-TTCAAGAGATAAAACATTTTAAAAATTGAAAATCC
AAAAAGGTTTTCACATGTATGCATGCGGTGACGTGGAAATCTGTTTTGCTATAGAGACGT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr4D_199
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GGCAAATTTAGTTTATAGATCATG-----------------------GCAATTTTAGTT
TATAGATAATGGCAGTTTTAGTATTTTGCTCATGGCAATTCTAGTATTTTTTATCAT-GAAATTATTTTTTGTATGGACC
ATGGC-AAATTTTAGTGCATGTATCATGACAAATTTAGGTAAATCACCATGGTAATTTTATTTTATGGTTCATGACAAAT
TTAAGTCGTTGATCATGCATTTTTAAATTAATTGACGACATATTTATTTTTAA-TTATGAACCATGTC-----TATTTCA
TGGATCATGGCAAATTTTAGTAATTCAACATGGCAAGTTTAGTTTCTTAATTTCT---TTTT-TTATAATATGTCAAAAT
TTACTTTAAATGTAGAAGAAAAGGTAGTTGAAACATATTATGGC-AACTTCAATGTAAACACCATGGCAATTTATGTGCA
ATAGACATGACAACTTTTAAC-----AAAAAA-GTCGTCGAAACAAATCGATATGATATCTAGTTTCGAAGATCTCGTCA
TGACGGATTTAATGGTGAAAACGGATGTTCAACCGA-ATTTTTAATTTAAGATATAAAATATTTTAAAAATTGGAAATTC
AAAAAGATTTAAACATGCATGCATGCGGTGACGTGGCAATCTGTTTT-CTATAGAGA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr7D_281
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TTT-----------------------TGACAATGAAAATTATTTTTTGTATGGACC
ATGGC-AAATTTTAGTGCATGTATCATGGCAAATTTAAGTAATTCACCATGGCAATTTTATTTTATGGTTCAAGGCAAAT
TTGAGTCATTAATCATGCAT-TTTAAAGTAATTGGTGACAAATTTCTTTTTAA-TTATGAACAATGTCAAAATTATTTCA
TGGATCATGACAAATTTTAATAATTCATCATGGCAAGTTTAGTTTCTTAAT---T---TTTT-TTATAATATGTCAAAAT
TTACTTTAAACGTAGAAGAAAAGGTAGTTGAAACATGTCATGACAAACTTCAGTGTAAATACCATGGCAATTTATGTGTA
ATAGACATGGCAACTTTTAACA---AAAAAAT-GTCATCAAAACATATCGATATGAGATCTAGTTTCGAAGATCTCGTCG
CGGCGGATTTGATGGTGAAAACGAATTTTCATTCAGATTTTTCA-TTTAAAAGATAAAACATTTTAAAAACTGAAAACTC
AAAAAGATTCCCACATGCATGCATGCGGTGACGTGGTAATCTGTTA--CTATAGGGACGTT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr6D_866
CTCCTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CCCC
CCGTCCATCCTAATTTTGGCAGACAACCAGAACAGCCCCAAAGAAAAACCCGGAGGCGACGCGGGGACTAGCCACCGATC
CAGCCCCATTCCCCCATCTTCCCTTCCTTCTGGTCTCCGTCGGACGGACAACATCCATG-----AACGGAGGCAT-----
-CGGCGGCGGCGGGATCCTGTCGTATGAGAAGCTGGAGGGGTACGCGGTATGGGTGGGCGCGAGCGTGGCAGCGGCCTTC
TTCATCTCCATGGAGCGGTGCTCCTGCATCCACCTCCACACCATGGACGACGACGATTGCGACGACCCCGAGGAGGCCAA
GGACCGGCCCCTCATGCTCTCACGCCCGCAGGCCCTCCCCGAGTACTACTACGACCGGACGGGGTCCTCCGCCTCGTTCG
CCAAGATGTGACGATCGAGGTCGATCATCTCGTGTGATCTGCTGTTTTTTTTAGTTCTTTTAATTGTTGATTAGG---TT
TTTCTTTTTG--TG-TTTTCTCATGATTCGTCCGTGCTATGATCTAACTGTGTTATTCGTGTGAGGCTTTCAAGAAATCC
AGCTCCTCATTGTTCATGCACGATTTAGAGGGCAGGTTAATCCGT-GATTTTGTACTGTCTATTGGCGAATCTTCTAG-A
ATTCGATTCCGAGATGGATCAT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr6B_871
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TCCCTC
CCGTCCATGCTAATTTTGGCAGACAACCAAAACAGCCCCAAAGAAAAACCCGGAGGCGACGCGGGGACTAGCCACCGATC
CAACCCCATTCCTCCATCTTCCCTTCCTTCCGGTCTTCGTCGGACGGGCAACATCCATG-----AACGGAGGCGG-----
-CGGCGGCGGCGGGATCCTATCGTATGAGAAGCTGGAGGGGTACGCGGTATGGGTGGGCGCGAGCGTGGCAGCGGCCTTC
TTCATCTCCATGGAGCGGTGCTCCTGCATCCACCTCCACACCATGGACGACGACGATTGCGACGACCCCGAGGAGGCCAA
GGACCGGCCCCTCATGCTCTCCCGCCCCCAGGCCCTCCCCGAGTACTACTACGACTGGACAGGGTCCTCCGCCTCGTTCG
CCAAGATGTGACTATCGGAGTCGATCATCTTGCATGATCTGC----TTTTTTTGTCCGTTTAATTTTTGATTAGGTCTTT
TTTCTTTTTG--TG-TTTTCTTGTGATTTGTCAGTGCTATGATCTAATTGTGTTATTCGTGTGAGGCATTCAAGAAATCG
AGCCCTGCATTGTTCATGCATGATTCGGATGGCAGATTAATCTAT-AATTTTGTACCATCTATTGGTGAATCTTCTAG-A
ATTCGATTCCGAGACGGTCATATGGATCATGTCCCACATTTTTGTTGCATTGTATCTTCGAAGCTGTGGAGCAGGAGTAC
ATATTATTTGGGCGTATGCACGTCACCATGTTTGATTGTTGTAACGCGTAGCTGTAATGTGAACCTCACAGGTTTTAGGT
CATGTTTCTACAAGGAAACTGAATTTCGAATTCGTGGAGAGAAAATGGGTGCTGGTAGTTGTTTCCCTATCCCAAGTTCA
TTTCC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>SNPs
----------------------------------SS------S-------------S---------S-S-----------
-----------SS----------S---------------------------------S-S-------S-----SS-SSSS
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S----SSS---S--S-S-SSSSS-SS--
--------------------------------------------S----S----S-------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
---S-----------S----------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S----------------------------------------------S
-----------S--------------------------------------------------------------------
-----------------------------------------------------------------------------S--
----------------------------------SS-----------S--------------------------------
------------------------------S-----------------------------S-----------------S-
-----------------------------------------------S---------------------S--S---S---
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
----------------------------------------------------------S---------------------
------------------------------S-------------------------------------------------
------------------S----------------------------------------------S--------------
-------------------------------------------S-------S----------------------------
-----------------S-------S------------------------------------------------------
---------------------------------S----------------S-----------------------------
----------S---------------------------------------------------------------------
------S-----------------------------------------S-------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S----------------S--S-S-------------------------------------------
-------S-----S------------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------------------
>forward_453
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GGGGGAGGGCAAAAAGTTGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_1859
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TGTGATTCGAACGGCCGATT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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