>input_sequence_85421
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-----ATGACGAGACTACTCCCGTGCTTCTGCGTCTGTTTAGTCGTCCTTCTCCTCGCTGGCTCCTCTCCGGCGGATCCC
CTGTCCGGTCGCTGCCCACTGCACCACCACCGTAGGCAGCTCGAGGACGTCGACGGCGGCGGCGGCCTGCAGGC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GACGGCGACGGCGAGCACCACGGCTGCAGTGCGGCCACCGCAAGA---GATCG-------------------
-----------------------------------CCGACCTGGTCGTCTATGGGACCTCCA------------------
-----------------------------------------------------------------AGAGGCTCAGTCCTG
GGGGATCCAACCCTCAGCACCACCACTGA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G423900
AGTCAACTAACGGTTTATTTAGGGGCGGGCCCAACCTGTCATAAACCAGATCAATTTTAAATCATATGGTCATTTGAGTT
TTTTTGGAACAGCCAACCAATTTTGTGGTAGATTTTTG-AAACATTAAAAAGTGGTAGTTTTTTGTAGACCTAACCTGTA
ATGTGGTAGTTGTTTGCTGTATACTCGCAT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TAGGGCCGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGCTGCC
GAGCTTATAATATTCCCGTTCTTAGGGT-AATACAAAAACTAATGCAGGATAACACGCAGCTGCACAACTGAATG-----
GAGCATTCATGCAAGGGTGGCATTACAATTGACGTACGTGCTTACCTTGGAAGATCACTTGAATGTGACTGTGAGTGAAG
CATATGATCATCCATGACCCAAGAGGCCAAGATAGATAACTACTGGTGGGTCCTGCATGCGTCGGTTTTTGGCAGG-TAT
GTCTCGCTCTTTAACCCCCGCGGACGATCGAGCTCCATCATTATCGTTTTAATCGAACAAGTAAACTAGAGTATAATCTC
ACCTGAGCCTAACTTATACAAGAGGCTCAATGCATATAGCCAAGC-----------------------------------
--------------------------------------------------------------------------TTAATG
CGCAAAGCAATACTACTATCGAATTCAAGTATTCAATTGCAAACCCCATCAGGCAGGACG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TGAAATGACATCTTGTCGCGCGCCTAGAAAGTCGAAGAAAACGGAGGCAAAAG
TGC-----------------------------------------------------------------------------
--------------------------------------------GTCGCGTGCTCTTTTGCTTTGACCTTTCACGTTGTC
AACCACTATCCATGTAGAAAGAGCGCTTCAGCTTATTATTTCAAAACAAGAACGCATGGTCAAGATGAAAAGGGTTTGC-
---TAGTGCATT----GAGCGTTTCAGGTCATACCAGC--------------------------TTTTCCATTTCTTTTA
GCAGCCCAGCACTGCACCGCCTAG----GCCTAGTCTTCATGCGTTTAGCCTATAAATGCTCGTCTCCTGCTAATTAACT
TGCAGATAC--ATGCATTACGGCAGTA----TAGG--TAGCGGCCATTTGCAGATCAACTAATCAACTCCGTACGGGCGA
GCTCAATGACGAGACTACTCCCGTGCTTCTGCGTCTGTTTAGTCGTCCTTCTCCTCGCTGGCTCCTCTCCGGCGGATCCC
CTGTCCGGTCGCTGCCCACTGCACCACCACCGTAGGCAGCTCGAGGACGTCGACGGCGGCGGCGGCCTGCAGGC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GACGGCGACGGCGAGCACCACGGCTGCAGTGCGGCCACCGCAAGA---GATCG-------------------
-----------------------------------CCGACCTGGTCGTCTATGGGACCTCCA------------------
-----------------------------------------------------------------AGAGGCTCAGTCCTG
GGGGATCCAACCCTCAGCACCACCACTGATCGAACCTTGGGTGTTCATCGGTGATAAGGTGTCCATCGGCTCCATGTAT-
AC---TTCAGTTTGCGGTAAGACAAGAGATTACTATTCGCAAAATAAAAGGAAAAGAAAAGCTCGAGTTTAATAATTGTA
TATAG-GGGCTGCGTCAATTAATTCGGATCAGAGGGCTGTAGTCCGTCAATGTTCCAACTTCCATCGATCAACGCCCCTA
AGCAACATGTGCCAACTATGTTTCTCAGGCTAGGCCGTTTGGAATG--------CTGAAACTGATCAATACCGGCCTTGT
CTAATCTACGTA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTGTTTT
ATTTTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TTTTTCTGTAAGTTT
GTTTTATTTTTTTGCCCTGCAAA-TTGTTCAAGAAGGGACTGGCTACAGGGCA--------ATTTTAGGATTTGGGTCAT
TCGTTTACTAACCAATCGAC-------TGAAGCAAAACATGTTTAAGTCAATTTAAGTCTTATAGCACAACTTAAGCCTT
TTCCCCATACAAACCAACGCAAGCCCGCAACACTTCTTGGGCCAATGCAAAACAACAAGCCATTGATGAACAATTT--TA
TTTAAGTTATCTAATGTAGATA-AATTAGTTAATGCACAAAAT----AAAAATGCACACTATTCACACAAAAA-TTGTGC
ATTTCTACGATATGCAAGAGTAAGCATATAGAAGTAGAATTTATGCATAAAAGAAGTTTCTAATAAGGAATGAATT-GGT
GATATTAATATTACCCTTTAAGAAGAGAATAAATAATGA-----------AAAAATTTACGCACAATTTAAAAAGAAAAT
TTATTATTACAATATA-AAAATAAGCATATAATAGTAAAATTTTCACCAAAATGTTTTCTAAAAAGTAATGGATTAGAGA
TATCGGTATTACCTTTACAAAATAAAATAAAATAAAAACTAAAACAAAATCG-AAAATGAAGTTTAAGGAAGAATGAATT
TGCGGCATTGGTATTACCCTTTCATAAGACCAAAAAATCAAACTAATGAAGTTTTTCTAAGAAAGAATGAAACCCTTTAA
>chr3B_1
AGTCAACAAACGGTTTATTCAGGAGCGGGCCCGATCTGTCATAAACCAGATCAATTTTAAATCAGATGGTCATTTGGG-T
TTTTTGAAATAGTCAATCAATTTTGTAGTAGTTTTTTGAAAAAATAAAAAAATGATAGTTTTTTGTAGCTATAGCCCGTA
ATGTGGTAGTTTTTTGCTATATACTCCAACAGCACTGCTCCACCTCCTCCTGTCACCACACCATTATCGGTCCCAGTATG
ATCCTGTCGGTACTTATTAGGTAATCAGCCACACCTGGTCATTAGAAATGAAAAAAAAAACAGGTACTTATTATCTTCCT
CTCTCGTGTTCTCCATATAAACCACATACTCCGATCTTCGTTTCGTCAATAGTACGTACGCGTACCTACCTTGAGACGAA
AGATTAATGGCAGTGTAAGCAGCCAAGGAGGGAGACAAGTCATAAGTGTGATCGATCTGGCCGTGGCATCTTGCCATTAA
CTAGGGCGCGCTGGGCCTGGTCCACTCAAGTGGGGTGTCAGTTTGTGACCCATTTTTATGCTCAGAAAGGGTAGAAATCA
CTGTTTTGACCTGAGGGCGAAATCAATTCACAAATTAAACTGTCTCGGAACCCTTTTGTGTGGCGCCCGACATCTAGACA
TCACACTACACTGACCAGTGTGGCACCTCTGGGCCCGCACCGAGCAGTGCAGCGCCTTTGATCTAGGCCCGCACTGATGA
CTCCTTTGATTAACTTTAAACGTTATTATGACAGCTCGGTTCCACTCCTCAGGTTGACCGTTAGATTTGACCATTAGTTT
GACCATTGATAGGTTATGACAGGTGGGGCCTAAGTATTTTTTAGCAAACAGGTCCATGAAACAAAATATAAAAGCAATTG
GGTCCCTGAAAAAATAAAAATAAAAGCAATCCCGTCCTCCCAGGGAGCTCGTCGTCGGAGCCGGCCAGCACCACGCCGGC
GAGCT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CGTCAGG-GCC
GTCTAGCTCTGGTCGTGGCC------------------------------------------------------------
-----------------------GGCGGGAAGCAACAGCCCTGGCGGGCTAGAACAACCCGAG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------CTCCCTGGCTGCTCCCCGCCCGAGCTC
CCCGCCTGTGCTCG-----------------------AGCTCGCGGCCATGGCCGGCGGCAAGCAGCAGCTACTCGCGTC
TGGCGCCGCCCAGGCTGCTGCTCACGAGCGCTTTGGCGCCGCCCAGGCTGCTGGCCACCGGAGCCAACTCCGTGGTGCCG
CTCACCCGCCCGGGCTTCTGGTCGCCAGAGCTCCCCATGGCGCGGGCTGAGCACGCAGGCGGCGGCGCGAGCCTCCCCAT
GGCGCAGCCGACAGTGGTTGTGGATCGAGATGGAGGTTGCTTCTTTCGTGCTCCGGCGGAACAGCGAGTGGCCGAAGGAG
CCCGTCATGGCGGCTGCGGCGCTGGACGCGGCTGGAACTCGTGTTCCTGCTCCTGCTGAACGTCGCCACGGGGAGAGGCC
GGAAGGAGCCCGTCGTGCCGGCTGCTGCGCGCGGCCTGAGCTGCTGGTCTCACGGCCCATGGCGGCGGCGGCGCTGGCTG
TAGTTGCTCGGGAGAGAGAGAGATAAGGGAAGGTCAGGGAGAGAAGAAAGAGAAGGGGAAGGAAGAGAGAGCCTGACATG
TGGGACCCACATGTCATCTAACGGTCAAACAAACAGTCAACAAACGGTTTATTTAGGAGCGGGCCCGATCTG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TCATAAACCAGATCAATTTTAAATCAGATGGTCATTTGGG---------------------
--------------------------------------------------------------------------------
------------------------------------------TTTTTTGAAACAGCCAACCAATTTTGTAGTAGTTTTTT
GAA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------AAAATAAAAAAAATGATAGTTT
TTTGTAGCTATAGCCCGT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------AATG
TGGTAGTTTTTTGCTATATACTC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr5B_182
ACTGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TAGGGCCGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGCCGGC
GAGCTTATAATATTCCCGTTCTTAGGGTAAATACAAAAACTAATGCAGGATAACACACGGCTGCACAACTGAATG-----
GAGCATTCATGCAAGGGTGGCATTACAATTGACGTACGTGCTTACCTTGGAAGATCACTTGAAT------GTGAGTGAAC
CATATGATCATCCATGACCCAAGATAG-----------ACAACTGGTAGGTCC----TGCGTCGGTTTTCGGCAGG-TAT
GTCTCACTCTTGACCCTCG---------CGGTTGCCATCACTATCGTTTTGATCGAACAAGTAAACTC-----TAATCTA
ACCTCAGCCTAACTAATACAACAGGCTCAATGCATATAGCCAAGC-----------------------------------
--------------------------------------------------------------------------TTAATG
CGCAAAGCAATACTACTATCGAATTCAAGTATTCAATTGCAAACCCCATCAGACGGGTAC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTGAAATGACATCTTGTCGCGCCCCTAGAAAGTCGAAGAAAACGGAGACAAAAG
TGC-----------------------------------------------------------------------------
--------------------------------------------GTCGCGTGCTCTTTTGCTTTGACCTTTCACGTTGTC
AACCACTATCCATGTAGAAAGAGCACTTCAGCTTATTA-TTCAAAACAAGAACGCATGGTCAAGATGAAAAGGGTTTGCT
AGCTAGTGCATT----GAGCGCTTCAGGTCATACCAGCTAGC----------------------TTTTCCATTTCTTTTA
GCAGCCCAGCACTGCACCGCCTAGCGTAGCGTAGTGTTCATA--TTTAGCCTATAAATGCTCGTCTCCTGCTAATTAACC
TGCAGATACATAAGCATCACGGCAGTT----TAGGTGTAGCCACAATTTGCAGATCAACTGATCAAGTACGTACGGACGA
GCTTAATGATGAGGCTACTCCCGTGCTTCTGCGTCTGCTTGGTCGTCGTCCTCCTCGTCGGCTCCTCCCCGGCGGATCTC
CTGGCCGGGCGCTGCCCGCTG---CACCACCGTAGGCAGCTCGAGGACGTCGACAGCGGTGGCGGCCTGCAGGC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AACGGCGGTGGCGAGCACCACGGCTGCTGTGCGGCCACAGCAAGA---GATCA-------------------
-----------------------------------CCGATCTGGTCGTCTATGGGACCTCCA------------------
-----------------------------------------------------------------AGAGGCTCAGTCCTG
GAGGATCCAACCCTCAGCACCACCACTGATCGAA----GGGTGTTCATCGGTGATAAGGTGTCCATCGGCTTCATGTATA
CTTCATTCAGTTTGCGGTAAGAGAAGAAATTACTATTCGCAAAATAAAAGGAAAAGAAAAGCTCGAGTTTAATAATTGTA
TA--G-GGGCTGCGTCAATTAATTCGGATCGGAGGGCTGTAGTCCGTCAATGTTCCAACTTCCATCGATCAACGCCCCTA
AGCAACATGTGCCAACTATGTTTCTCCGGCTAGGCCGTTTGGAATGTTGATCTCCTGAAACTGAACAATACCGGCCTTGT
CTAATCTTCGTAACGATCTTTCTCTTCATCAAAAGA--------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------ATGTCACATTTCAAGCAAGGCCTTTTTTTCTGTAAGTTT
GTTTTATTTTTTTCCTGCAAGTTGTTGTTCAAGAAGGGACTGGCTACAGAGCAGTTGCCTGATTTTAGGATTTGGGTCAT
TCGTTTACTAATCAATCGACAATCGACTGAACAAAAACATGTTTAAGTCAATTTCAGTGTTATACCGCAACTTAAGCCAT
TTTCCCATACAAACCAACACAAGCCCACAACACTTCTTGGGCCAATGCAAAACAACAACCAATTGATGAACAAATAAATG
TTGAAGTTTTATAATGGAGAATGAATTAGTTAATGCACAAAATGAAAAAAAATGCACACTATTCACACAAAAA-TCATGC
ATTTCTATGACATGCAAGAATAAGCATATAGAAGTGGAATTTATGCATAAAAGAAGTTTCTAATAATGAATAAATT-GGT
AACAGTGATATTACCCTTTAAGAAGA-----ATTAATGG-----------AAAAAATTGCACACAGTATACACATAAAAT
GTATTATTACAATATACAAAATAAGCATATAATAGTGAAATTTTCTCAAAAATGTTTTCTAAAAAGTAATGGATTAGAGA
CATTGGCATTACCCTTACAAAAGAAAAGAAAATGAAAACTAAAACACAATCA-AAAAATGAA------------------
--------------------------------------------------------------------------------
>chr4D_186
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCAT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TAGGGCGCC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CC
GAGCTTATAATATTCTATTAATGGGGTAAG--ACAAAAACTAATGCAGGATGACACGCGGATGCACAACTTAATCGAGCA
GTGCATTCATGCTGGAGTGGCATTATAATTGACGTACGTGCTTACCTTGGAAGATCACTTGAATATA------AGTGAAC
CATATGATCATCCATGACCCAAGATAACTGGCCCC------ATTGGTTGGTCT----TTCGTCCGTTTTTGCAGGTATAT
GCCTCACTCTTGACTCTCC---------CGAGTGCCATCACTGTCGTTTTGATCAAA-----------------------
---------TAAATGATACAATTGGCTGAATGCAATAACCAAGGCAACGAACCTTAGTTGGTACTTTTTCTCACGCGTCG
TGTATGTCGTACAATCACGTAGGAGTAATCTAATCGTTAGTGTTAGTTTTTCTTTTTGGCGGGAATCTAATTGGTTAATG
CGCAAATAAAA------ATTGAATTCAAGTGTTCAGTTTCAAACCCCATCAAACAGGACTTGAGATTCCCCGAAAGTAAA
AAACAGGACTTAAGAATGTTATGCATGTACTACCTCCGTTCTGATTTATTAGTCATATTCGTATTTAGGGCCATATTTTG
ACAACAATTTTAACTACTAAAATATAAGTTATACGTAGCAAAACTAATGTCATTGAACTATGTTCAAATACGAATCCAAA
GATATCATTTTTTATGACATGCAGTAACATTTGTCAGTTAAATTTATGATCAAAATTTGGCACTAAATACGGAAAGGACT
AATAAATCATAACAGAGGAGGTAGCTCTGAAATGACATGTTGTCTTATTTGTAGAAAGTGGAAGAGATGGAAATGAAAGT
TGTAAGTTTCTCCCATTGTGCAGCTTGTGTATTGGGGGTGCAGATTAGTTTTGATGTGGTAATGTTATCTCACTCCATTT
TTTTAATGAAAATGGTGGCCAAGTGGCGCCTTCCATCGAAAAAAGTAGCGTGCTTTTTCGCTTTGACCTTTCACGTTGTC
AATCACTATCCATGTAGAGAGACCGAGAGATCACATCAGCGCTATCGA---------GGTCAAGATGAAAAAGGTTTGCT
AG----TGCATCAGTGGAGCGTTTCAGGTTATAACCGGATAAATTATATCATAATGAAAGTTTTTTTTTCATTTCTTTTA
GCAGTCCAACACCA-----------------------------------CCTATAAATGCTCCTCTCTTGCTAATCAACC
TGCAGATACATGCATAGAGCAGCCAGCTGCATAGGTTTAGCTATCATATGCAAATCAACTAATCAAGTACGA----ACGA
GGTTAATGATGAGGCTACTTCTGTGTTTGTGCATCTGTTTT---GTCCTCCTCCTCGCCGGCTCCTCCCCC---GACTCC
CACTCCGAGCGCTGCCCCCTG---CAGCACCGCCGGCAGCTCCAGGACGTCGTCGTCAGG------CTTCAGGC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GACAGCGGCGGCGAGCACCGCGGCTGCAGCTCGGCCACGGCAAGAAGGGATCG-------------------
-----------------------------------CCGATCCG---GTCTATGGGACCTCCA------------------
-----------------------------------------------------------------AGAGGCTCAGTCCGG
GGGGATCCAACCCTCAGCACCACCGCTGATCGATCCTTTGCGTGTTCCATC-----------------------------
--------------------------------------------------------------------------------
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>chr5A_224
--------------------------------------------------------------------------------
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------------------TTCTTAGGGTAAATACAAAAACTAATGCAGGATAATACACAGCTGCACAACTGAATG-----
GAGCATTCATGCAAGGGTGGCATTACAATTGACGTACGTGCTTACCTTGGAAGATCACTTGAATGTGACTCTGAGTGAAC
CATACGATCATCCATGACCCAAGAGGCCAAGATAGATAGCTACTGGTGGGTCCTGCATGCGCCGGTTTTTGGCAGG-TAT
GTCTCTCCCTTTGACCCCCGCGGA----CGAGCGCCATCATTATCGTTTTAATCGAACAAGTAAACTAGAGCATAATCTA
ACCTGAGCCTAACTGATAGAGCAGGCTCAATGCATATACACAAGC-----------------------------------
--------------------------------------------------------------------------TTAATG
CGCAAGGCAATACTACTATCGAATTCAAGTATTCAATTGCAAACCCCATCAGGCAGGACT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TGAAATGACATCTTGTCGCGCGCCTAGAAAGTCGAAGAAAATGGAGACAAAAG
TGC-----------------------------------------------------------------------------
--------------------------------------------GCTGCGTGCTCTTTTGCTTTGACCTTTCACGTTGTC
AACCACTATCCGTGTGGAAAGAGCACTTGAGCTTAGTATTTCGAAACAAGAACGCATGGTCAAGATGAAAAGTGTTTGCT
AG----TGCATT----GAGCGTTTCAGGTCATACCAGCTAGC----------------------TTTTCCATTTCTTTTA
GCAGCCCAGCACTGCACCGCCTAGCCT----TAGTGTTCATGC--TTAGCCTATAAATGCTCGTCTCCTGCTAATTAACC
TGCAGATACATATGCATTACGGCAGTT----TAGGTGTAGCCACCATTTGCAGATCAACTGATCAAGTACGTACGGACGA
GCTTAATGACGAGGCTACTCCTGTGCTTCTGCGTCTGTTTCGTCGTCCTAGTCGTCGCAGGCTCCTCCCCGGCGGATCTC
CTGTCCGGTCGCTGCCCGCTG---CACCACCGTAGGCAGCTCGAGGACGTCGACAGGGGTGGTGGCCTGCAGGC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GACGGCGGTGGCGAGCACCACGGCCGCAGTGCGGCCACCGCAAGA---GATCG-------------------
-----------------------------------CCGATCTGGTCGTTTATGGGACCTCCA------------------
-----------------------------------------------------------------AGAGGCTCAGTCCAG
GGGGATCCAACCCTCAGCACCACCACTGATAGAACCTTGGGTGTTCATCGGTGATAAGGTGTCCATCGGCTTCATGTATA
AC---TTCAGTTTGCGGCAAGACAAGAGATTACTATTCGCAAAATAAAAATAAAAGAAAAGCCCGAGTTTAATAATTGTA
TA--GAGGGCTGCGTCAATTAATTCAGATCGGAGGGTTGTAGTACGTCGATGTTCCAACTATGC----------------
-----------------ATGTTTCTCCGGCTAGGCCGTTTGGAATGTTGATCTCCTGAAACGGAACAATACCGGCCTTGT
CTAATCTTCGTAAAGATC-TTCTTTTCATCAAAAGAACTAGCAGTGTGACCCGCACATTTGCGCGACTAGATTTTTTCGC
ATGTTTGTATATGTGCTATTTGTATTTTGATAGGGCCTGTAGATCAAAAGTCATGGCACTATTTTCATGTGAATATGCTC
CATGAGATTATAGATGTTAATATTGCAAGTGAATCATTGGTAAATTGATACATGCTAGTAATATATTATAAGCTAATGTT
ACAAATTTCATATTTCTATCTATTTTTTACTTCAAAATTCATGTATATGATATAAATTGTTTAACCAATGGACTCCAAAT
AGATTCATATATGTGGTATATTTTGACCTTGAGTAAATAATTATTTCACATGCAGGAGTTCATACAAAAAATATTGTTTT
ATTTCTTATTAAAAAAACTTCACATTTCATATAGATTTTCATTTATATGGTATATCGCTTTTAAATTTCATCATGAAATC
ACATTCGTGGAAGTCACAAAAAACAATTAAAATCAAAGCTCCAAAATGCGTTTGAATGTAACATTTTCAGAGCGTCGATT
TTGTTTTTTACCATGCCTTGCACCAATGTGATTTCGTGATGATTTTTTCATGCACACTAAACATTTAGTGTTTAGTGTTT
GCCACAAACATTCCTTAAAGTTTGCCACAAAAAGATATCATTTTTTTTTCGAAATTACTGTTCATCTAGGAGCATTTGAG
CTCGAGATTTGAAACTCCGCATCCATTGTATTGTGAGAATTTCTGTAATTGCAAAATTGGCATTTTTTTCCTTTGGTGAT
ACTCTTTTTTCTGGACCCCAATAATGCCCGAACGTTCGGGATTTAAACTTGCCATCCTCGCGTAACTAAATTGCCATAGG
AAACATTCGACTTGCCATGGTCGAATCCTGAACAGGATTTATATTATCAAAAAAACTCAATGGCTTTGGTGTACTCACGT
CATAAAACATGAACGTGTTGGTTTGACATTGCAAGGGGATAATGTCATACGCTGTGAGATGATGTCATTGTGTGTTTTGC
CTTATCCGTGTCCAAACAAAATATTTGTTTGTTTTTGTGTACTTCGTAGTGACCTTTGCATTGCACGTGTGGCAAAGAAA
TCCTTGAGGCACACGTTTCACCTCAATATGTCCTTACATTTCTTTTTTCCTTTCAGGTAAACCGGGTCTTGTAGCACATT
TTCTGTTAAGTGATCAAGTCCATACGTGCTAGATACTTTTCTTTCTAGCATTTCTACATTATGCCATCAAGTCCATACAT
GCCAAATAAAAACAAAATGTGTCCAACTCATCAAAGGTAAAAGATACGAGTACGTGATGTTGTTGCTCAAACTCTTTTGG
ATTTTGAATCTCGGTCGTCAAGATCAAGATCGATGGAATATATACTTTTAACCTATATACGGAAAAACAGCATGGCATGT
TCATCTCTTGTTTTGCAGCCAACACTAAAGGCGTATGCACTAATTTTCTATTTTCTTTTGTTATTATTTTAGTTCCTTTG
GTAAACATATAGTTGTATTCTTGACCTACATTTTAAGATTTTTTGCATTTTATTAAGTAACTCATACTGAGTTTGTATGG
GAACAAAATCACTACCCTATTCATATTCCAAATTTTATATTTATAATGTGATTGCATTATTTGTCCATACAATAAGGGTT
CGAAATATTATAACTCGATTTAAATTTAGATATGATAAATGTAACACAAAGTCATTCTAAAATAAAAATTATAGTAGTTT
TTATTATTCTAAATTTGGCATACAGAACATAGTTGTATTATTATTTATCGCATATATCTGTCGATTGGACTGATGTGTGT
ATACCAGCGTTGTTAATCATTACTGATGACCTAATATTCTTTTTTGCCCGCAGCTTTTGTCCCCAGAGGCCCATCAGATC
TGACGGAGTATGTGAACTGGGCCTACAGGTGGTAGTTAGCCATTATGAGGTCCGTTTGGTTTTTTTCCTCCTATTAGAAT
CTGAATAGGAATTGATTATCCCTTATTTGCTTGTACACACACGTAATAGTGGGATAGTAAAGTTTTAGGTTTACTTTTCC
GATCGTGGTTACACTTTCCATCGTAGATATATGTACGTGCCAACTAAAAAAAGATATATGTACGTGCCAGAGTTCTTGTG
TGCAAAATAATGCATACACATAATATTTGTATGTAACGCTTATGTCTTTAAATCTCATCCGTTTATTTTAAAAATTAACG
GTCAAGATAATTTAGTCCGTGTGGATAAACGTGATGGCTTTTTTTTGCGGGGAGAAAGGAGATTGTATTAAATTAAGGGG
GCATAATATTGTTCATACAAAGGGTAGCAATCTCCTCTAAGCTAGAGCCTAAGCACACAGCCGTGCGTGGCATTGTACAC
CCATACGCAGCATGGGCATCACTCACTCTATTTTGACTTCGGCGGATAAGCTTGACCACCACTTCTCTATCATTTTCCAA
CAACGATGGCTTGTTTACCTCTTGTTTTAATTATATAATAGATGTCACATTTCAAGCAAGGCCTATTTTTTTTCTAAGTT
------TTTTTTTCATGCAAGTTGTTGTTCAAGAAGGGACTGGCTACAGGGTAGTTGCCTGATTTCAGGATTTGGGTCAT
TCGTTTACTAACCG-------ATGGATTGAACCAAAACATGTTTAAGTCAATTTCAGTGTTCTAGCACAACTTAAGCCTT
TTTCCCACACAAACCAACAGAAC-------CACTTCTTGGGCCAATGCAAAACAACAACCCATTGATGAACAATTT--TT
TTTAAGTTTTCTAATGGAGATA-AATTAGTTAATGCACAAAAT----AAAAATGCACACTATTCGCACAAAAAATTGTGC
ATTTCTATGATATGCAAGAGTAAGCATATAGAAGTGGAATTTATGCATAAAAGAAGTTTCTAATAAGGAACGAATTTGGT
GGCACTAATATTACCCTTTAAGACGAAAATAAATAAAAATAAATAATAATAAAAAATTGCGCACAATTTAAAAAGAAAAT
GTATTATTAGAATATGCAAAATAAGCATATAATAGTAAACTTTTCTCCAAAGTGTTTTCTAAAAAGGAACGGATTAGAGA
TATCAGTATTACCATTACAAAAGAAAAGAAAATAAAAACTAAAACAAAATTGAAAAATGAAGTTTAAGGAAGAATGAATT
TGTGGCATTGGTATTACCCTTTCATAAGACCAAAAAATCAACTAATGAAG--TTTTCTAAGAAAGAATGAAACCCTTTAA
>SNPs
-------S-----------S---S--------S-S-----------------------------S-----------S-S-
------S--S--S---S---------S----S----------S--S-----S--S-------------SSS--S--S---
-----------S------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------------SSSS-----S-------------------------------------S-------S
--------------S------S----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S----S-------S-----------------------------------S
--------------------------S--------------SS-----------------------S-S-------S---
---S---------S--------------------------S--------S-----------------S------------
-----------------S---SSS--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--SS--------------------------S-------------------------------------------------
--------------------------S-------------------------------------S---------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----SS--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------S-SSSSSSSS---------------------------------------------------------
-------------------------------S----------------------S---S---------------------
--S---------------S-------S-------------------------------S--------------------S
--------S-----------------------------------------------------------------------
-------S---------------------------S--------------------------------------------
--S-S---------------------S----------------------------S--S---------------------
S--------------------------------------------S----------------------------------
-------------S--------S----S----------------------------------------------------
--S--------------------------------------SSS-SSS-SSS----------------------------
>forward_2204
--------------------------------------------------------------------------------
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-----------------------CCTAGGCCTAGTCTTCATGCG------------------------------------
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>reverse_6027
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--------------------------GCAACACTTCTTGGGCCAAT----------------------------------
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