>input_sequence_85335
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-------------------------------------------ATGAGTTCATCTTGGACAGCAAAACAGAACAAGATCT
TTGAGACGGCGCTAGCGACGTATGACGAGGACACGCCAGACCGCTGGCAGAAGGTGGCACGAGCAGTCGGTGATGGGAAG
TCAGTCGATGAAGTGAAGAGGCACTATGAAGAGCTGCTGAAGGACCTGCATCACATTGAGTATGCAGGCGGCCGTCGCGG
ATCCCTCTACAACATCTCCGGCGCCAGCAGTAGCAACGGCAACTCCTGGGGCAGTGCCAATGAGGACCACAGGTAA----
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>chr6B_1_TraesCS6B01G300600
GATATTTGAATATTTTTGTTACAGTGGA-AGGTCGTCGACACAAATTGTTAGTCACTAGCTTTTCCTTGTACTTGCTATA
TTCACTATTCAGGGCTTCTGTTCCAAATATCCTCTGCTACTAAACATCATTGTTTTAAGTGATGTTGCAAATTGTATGTA
GTTTGTACAGCCAATTAATTGACTGCAAATTGGTGGA-AGCACCTTTGTTCAAAACATTCCGTAAGTTTGTAACATCGAC
AAGGATGTTGCATGCTTCTATCCTGGCACAAATGGCCTTGTGATATTCTTTTAGGTACAACTAGTTATGGTTAGTATGCA
CTCTAGGCCTTCTGACCACTAGCTTTGCCTGCGCTTACCCCTCTTCTTGTGACCTTTTTGCTTCTTTGTAGAGCTGTGTG
TGTAGGCTTGTTGCTTTGCTTGTCTGGTTTTGTTAGCCTAGGTTGCTTTGTATATTGTGGTTTAATTGGCCTGGTAAGTT
TTTGCATCATCTCAGTGTGCTTCTTCCAATACAAAACGACACGCATGTTGATGTGAGTTTGAGAAAAAAGTTGTGGTAAG
TACCAAATGCACCCTTAAAGCATGGTTTCAAGTTTCAACATAGAAAAAAG-GCAAGAATAAAGGATGTCTATCAAGATTG
TGGGATGAAATGAGATGACAAAGGTCTAGTCTCCCAGCAAATCTGAGTGATTTTGATTCCTCCCTACAAATTTAATACAC
ACCAGATTAGTGTGGTGAGTCGGTGAAATTTCTCGTGGCTCCCTCCTACATAGGCGTGTCAACTCATTGCGTACTGCTAA
CACAAATCACCACCCACTCAATACTGGGTATTGTGTTGGCTTCCCCCTCTATATAAATAGCACATCTGCGCTCACTCTTT
GTTCCACAGAAACACGAGCAGCCACAAGTAGTGTCCATTACTAGTCCCCTGACCTTTCGTGGAAAATTTCTCCCTGCTGG
GGAAACAGTAAAGGGGAAGGAGAGAAAGAAAAATAGAGAGATAATGAGTTCATCTTGGACAGCAAAACAGAACAAGATCT
TTGAGACGGCGCTAGCGACGTATGACGAGGACACGCCAGACCGCTGGCAGAAGGTGGCACGAGCAGTCGGTGATGGGAAG
TCAGTCGATGAAGTGAAGAGGCACTATGAAGAGCTGCTGAAGGACCTGCATCACATTGAGTATGCAGGCGGCCGTCGCGG
ATCCCTCTACAACATCTCCGGCGCCAGCAGTAGCAACGGCAACTCCTGGGGCAGTGCCAATGAGGACCACAGGTAATTAA
GAAGCCCGTACTCTCATACACACATAATCTCATGGTGCATCCTCTTCATATGCTCACCTGTTGTTATGCACTACTAGTCA
TGGGTGTATGTTCAAGAGCAGTGTTTCTGCATGCTGTTACTTGATTTTGTAGCTTTTGGTCATTTTATGATTCCTAACGT
CCCACACCTAGATTATCTTTTTCCCTCTAGTTTGCAGCATGCCTTTTATAGTTTGTTCCTCCTATTCTGTTCTTCCGGCT
TGTGTTTAAGTGTCTGGGTGTGCCTTGATTATCTGTATCTTGGGCTATCTGAAATGTAAGTCAAATCCATTGTCCTTGGA
TTTTGCTGGAATTGACTTATGCCTTGCATAACTTTTTTTTTTGACTTGTGCCTTGCATAACTTATGTGATTAGTTTGACA
ATTACATTCTTCCCGAAGTGTGGAATTTGACTAGCTCTGCAGATTGCATTTTTCTGAACTTAGCTATATAACTGCTGGTC
TGCTGCCCTGTTCCATTTCCACCTTGTGAT-AATTAAGCATGTGATCCTTGTTTGTTGTTTATAAGGAGTACTCCAAGTT
CCAACTAGTAAATAGTAATACACTTTTGTGCTCTTTCTTCATGTTTTGTGCACTCTGTTGACTGAGACTCCATTTGGCAA
GACAAGTCAACTCCCTTTTATCTGCCAACAATGCGCAAATTCAACTAAATGGAAGATACAGCAGAATAAACAGAAGTATG
CTGAAATTTCAAACTCCAGGCAGCCTCACTTTTTTTGTTTTTTGTGAACAACCTCACCTGTCCGTGATGATGATCTGCCG
GCAAAATACTAGTGGATAACTATGGCCACAAGGACACTATCTGATCCAGTTTAGTGTCGAATTAAATTGTGAGTACAGTG
GGAAAGATATGGATAAACACCCGTAATCATAGT-AGTTACTAATCTCTAAACTGGGCGGTGAAGCAGGTCAATCTGTTTA
CGGGAATGAAAATTCTTTAGCATTAGTATGTTTGTGCT
>chr6D_1
GATATTTGAATATCTTTGTTACAGTGGGGAGGTCGTCGACACAAATTGTTAGTCACTAGCTTTTCCTTGTACTTGCTATA
TTCACTATTCAGGGC---------AAATATCTTCTGCTACTAAACATCATTGTTTTAAGTGATGTTGCAAATTGTATGTA
GTTTGTACAGCCAATTACTTGACTGCAAATTGGTGGACAGCACCTTTGTTCAAAACATTCCGTAAGTTTGTAACATCGAC
AGGGATGTTGCATGCTTCTATCCTGGCACAAATGGCCTTGTGATATTTTTTTAGGTACAACTAGTTATGGTTAGGATGCA
CTCTAGGCCTCCTGACCACTAGCTTTGCCTGCACTTACCCCTCTTCTTGTGACCTTTTTGCTTCTTTGTAGAGCTGTGTG
TGTAGGCTTGTTGCTTTGCTTGTCTGGTTTTGTTAGCCTAGGTTGCTTTGTATATTGTGGTTTAATTGGCCTGGTAAGTT
TTTGCATCTTCTCAGTGTGCTTCTTCCAATACAAAACGACACAGATGTTGATGTGAGTTTGAGAAAAGAGTTGTGGTAAG
TACCAAAGGCACCCTTAGAGCATGGTTTCAAGTTTCAACATAGAAAAAAAAGCAAGAATAAAGGATATCTATTAAGATTG
TGGGATGAAATGAAATGACAAAGGCCTAGTCTCCCAGCAAATCTGAGTGATTCTAATTCCTCCCTACAAATTTAATACAC
ACTAGATTAGTGTGGTGAGTCGATGAAATTTCTCGTGGCTCCCTCCTACATAGGCTTGTCAACTCATTGCCTACTGCTAA
CACAAATCAACACCCACTCAATACTGGGTATTGT--TGGTTTCCTCCTCTATATAAATAGCACATCTACGCTCACTCTTT
GTTCCACAGAAACACGAGCAGCCACAAGTAGTGCCCATTACTAGTCCCCTGACCTTTCTTGGAAAATTTCTCCCTGCTGG
GGAAACAGTAAAAGGGGAGGAGAAAAGGAAAAATAGAGAGAT-ATGAGTTCATCGTGGACAGCAAAACAGAACAAGATCT
TTGAGACGGCGCTAGCGACGTATGACGAGGACACGCCAGACCGCTGGCAGAAGGTGGCACGAGCAGTCGGTGATGGGAAG
TCAGTCGATGAAGTGAAGAGGCACTATGAAGAGCTGCTGAAAGACCTGCATCACATTGAGTATGCAGGAGGCCGCCGCGG
ATCCCTCTACAACATCTCCGGCGCTAGCAGTAGCAACGGCAACTCCTGGGGCAGTGCCAATGAGGACCACAGGTAATTAA
GAAGCCCGTACTCTCATACAGGCATAATCTCATTGTGCATCCTCTTCATATGCTCACCTGTTGTTATGCACTACTAGTCA
TGGGTGTATGTTCAAGGGCAGTGTTTCTGCATGTTGTCACTTGATTTTGTAGCTTTTGGTCATTTTATGATTCCTAACGT
CCCACACCTAGATTATCTTTTTCCCTCTAGTTTGCGGCATGCCTTTTATAGTTTGTTCCTCCTATTCTGTTCTTTCGGCT
TGTGTTTAAGTGTCTGGGTGTGCCTTGATTATCTGTATCTTGGGCTATCTGAAATGTAAGTCAAATCCATTGTCCTTGGA
TTTTGCTGGAATTGACTTACGCCTTACATAAC-----------------------------TTATGTGATTAGTTTGACA
ATTACATTCTTCCCGAAGTGTGGAATTTGACTAGCTCTGCAGATTGCATTTTTCTGAACTTAGCTATATAACTGCTGGTC
TGCTGCCCTGTTCCATTTCCATCTTGTGATAAATTAAGCATGTGATCCTTGTTTGTTGTTTATAAGGAGTACTCCAAGTT
CCAACTAGTAAATAGTAATACACTTTTGTGCTCTTTCTTCATGTTTTGTGCACTCTGTTGACCGAGACTCCATTTGGCAA
GACAAGTCAACTCCCTTTTGTCTATCAACAATGTGCAAATTCAACTAAC--GAAGATACAGCAGAATAAACAGAAGTATG
CTGAAATTTCAAACTCCAGG----------------------------CAACCTCACCCGTCCATGATGATGATCTGCCG
GCAAAATACTAGTGGATAACTATGGCCACAATGACACTTTCTGATCCAGTTTAGTGTCGAATTAAATTGTGAGTACAGTG
GGTAAGATATGGATAAACACCCGTAATCATAGTTAGTTACTAATCTCTAAAGTGGGCGGTGAAGCAGGTCAATCTGTTTA
CGGGAATGAAAATTCTTTAGCATTATTATGTTTGTGCT
>chr6A_1
GATATTTGAATACCTTTGTTACAGTGGGGAGGTCGTCGACACAAATTGTTAGTTACTAGCTTTTCCTTGTACTTGCTATA
TTCACTATTCAGGGC---------AAATATCCTCTGCTACTAAGCATCATTGTTTTAAGTGATGTTGCAAATTGTATGTA
GTTTGTACAGCCAATTAATTGGCTGCAAATTGGTGGACAGCACCTTTGTTCAAAACATTCCTTAAGTTTGTAACATCAAC
AAGGATGTTGCATGCTTCTATCCTGGCACAAATGGCCTTGTGATATTTTTTTAGGTACAACTAGTTATGGTTAGTATGCA
CTCTAGGCCTCCTGACCACTAGCTTTGCCTGCGCTTACCCCTCTTCTTGTGACCTTTTTGCTTCTTTGTAGAGCTGTGTG
TGTAGGCTTGTTGCTTTGCTTGTCTGGTTTTGTTAGCCTAGGTTGCTTTGTATATTGTGGTTTAATTGGCCTGGTAA-TT
TTTGCATCTTCTCAGTGTGCTTCTTCCAATACAAAACAACACACATATTGATGTGAGTTTGAGAAAAAAGTTGTCGTAAG
TACCAAATGCACCCTTAGAGCATGGTTTCAAGTTTCAACATAGAAAAAAG-GCAAGAATAAATGATATCTATTAAGATTG
TGGGATGAAATGAAATGACAAAGGTCTAGTCTCCCAGCAAATCTGAGTGATTGTAATTCCTCCCTACAAATTTAATACAC
ACTAGATTAGTGTGATGAGTTGGTGAAATTTCTCGTGGCTCCCTCCTACATAGGCTTGTCAACTCATTGCCTACTGCTAA
CACAAATCACCACCCACTCAATACTGGGTATTGC--TGGCTTCCCCCTCTTTATAAATAGCACATCTACGCTCACTCTTT
GTTCCACAGAAACACGAGCAGCCACAAGTAGTGCTCACTACTAGTCCCCTGACCTTTCTTGGAAAATTTCTCCCTGCTGG
GGAAACAGTAAAAAGGGAGGAGAAAAGGAAAAATAGAGAGATAATGAGTTCATCGTGGACAGCAAAACAGAACAAGATCT
TTGAGACGGCACTAGCGACGTATGACGAGGACACACCAGACCGCTGGCAGAAGGTGGCACGAGCAGTCGGTGATGGGAAG
TCAGTCGATGAAGTGAAGAGGCACTATGAAGAGCTGCTGAAGGACCTGCATCACATTGAGTATGCAGGAGGCCGTCGCGG
ATCCCTCTACAACATCTCCGGCGCTAGCAGTAGCAACAGCAACTCCTGGGGCAGTGCCAATGAGGACCACAGGTAATTAA
GAAGCCCGTACTCTCATACACACATAATCTCATTGTGCATCCTCTTTATGTGCTCACCTGTTGTTATGCACTACTAGTCA
TGGGTTTATGTTCAAGAGCAGTGTTTCTGCATGCTGTCACTTGATTTTGTAGCTTTTGGTCATTTTATGATTCCTAACGT
CCCACACCTAGATTATCTGTTTCCCTCTAGTTTGCAGCATGCCTTTTATAGTTTGTTCCTCCTATTCTGTTCTTTTGGCT
TGTGTTTAAGTGTCTGGGTGTGCCTTGATTATCTGTATCTTGGGCTATCTGAAATGTAAGTCAAATCCATTGTCCTTGGA
TTTTGCTGGAATTGACTTATGCCTTGCATAAC-----------------------------TTATGTGATTAGTTTGACA
ATTAGATTCTTCACGAAGTGTGGAATTTGACTAGCTCTGCAGATTGCATTTTTCTGAACTTAGCTATATAACTGCTGGTC
TGCTGCCCTGTTCCATTTCCACCTTGCGATAAATTAAGCATGTGATCCTTGTTTGTTGTTTATAAGGAGTACTCCAAGTT
CCAACTAGTAAATAGTAATACACTTTTGTGCTCTTTCTTCATGTTTTGTGCACTCTGTTGACTGAGACTCCATTTGGCAA
GACAAGTCAACTCCCTTTTGTCTGTCAACAATGTGCAAATTCAACTAAATGGAAGATACAGCAGAATAAACAGAAGTATG
CTGAAATTTCAAACTCCAGG----------------------------CAACCTCACCTGTCCATGATGATGATCTGCCG
GCAAAATACTAGTGGATAACTATGGCCACAATGACACTATCTGATCCAGTTTAGTGTCGAATTAAATTGTGAGTACAGTG
GGAAAGATATGGATAAACACCCGTAATCATAGTTAGTTACTAATCTCTAAACTGGGCGGTGAAGCAGGTCAATCTGTTTA
CGGGAATGAAAATTCTTTAGCATTAGTATGTTTGTGCT
>SNPs
-------------S-------------S----------------------------------------------------
---------------SSSSSSSSS--------------------------------------------------------
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-----------------------------------------------S--------------------------------
----------S---------------------------------------------------------------------
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--------S---------------------------------S-------------------------------------
-----------------S------------------------------------------------S-----S-------
-------------S--------------------------------------S-S-------------------------
--S----------------------------------------------------S--------------S---------
----------------------------------SS-------------------------------S------------
---------------------------------S------------------------S---------------------
------------S---S------S--S---------------------------S-------------------------
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--------------------------------------------------------------------S-----------
------------------------S-------------------------------------------------------
---------------------------------S----------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------S-----
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--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
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-------------------S----S--------S----------------------------------------------
--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S----------------
-------------------------------S------------------------------------------------
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>forward_791
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----------------------------------------------------GGCGTGTCAACTCATTGCG---------
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>reverse_2045
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--------------------------------------------TGAACAACCTCACCTGTCCG----------------
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