>input_sequence_85252
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-----------------------------------------ATGGTGCATAGGCTTACACACGACGAAGGTGACGAGGCT
GCCGCCACCACGGAGGGGACCAAGAGGGAGACGGCGGCGACGAGGAGGAGGACAAGGAGGCAAGGTGGTGGAGACGCCAT
CGCGGCGATCAAGAGGAGGATGCTGCGGTGCAGCGAGGCCGGAGAACGGGGGAGATTCAAGCGGAGCTACTTGGCAGGCG
CAGGCGGCGGCGAGCAGGGCGACGGCGCCTCCGCCGTCTTCTTCTACCTGGCCTGCATCGCCTGCGCCCCCGCTTA----
G-------------------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G313400
TGATACTATATAGTAGCACTCAAACAAAAGAAAGGAAGCAATGATATAGCATACTCAAATCGGTCAAGCGTACGAGCACA
GCATTTCCAGATGAACCGATCCAATGGATCCCAGAATTGGCACAAATTCAGGCGTGCTCCAAACCGGACACACGCACCGC
AAGCACGCAGCAGGCAGGACAAACGCAGGAGCATTACGACCGAGGTTCCG-----ATGAGTAGACGGCCGATTCTATTCC
AAGAATCGAAAGCCCGAATTCTGAGCCTCGGATGCCACCCCGACACCGAGATGAGATGTTCTCTCTCGGATGCTCTGTTG
CTCGCTCCTGCAGGCTGCATATCATGTTAATGACTGCCGCCTGCGTAA----AGCCACGGTCGGCGCTCTGAATCG----
-----CGATCGCATCTTGTCATCGATT-----------------------------------------------------
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-------------------------------------CCCATCTGGTCGCAGCAGCAGCAAGCGTATTACGTGAGCTTAA
CAATATCCCATCTTTAATTCTCTCGAGGTCAACACTGTGCTAGCTTAACTGTCAGCTTCCCACATGTAAA----------
---AATGGATTCAGGACGGCTTGCCTCGATAACTGAAGCCCACCACAGCGTATTCAAATCGGTGAAGCGTACACGCGCAT
CATTTCAGGATGAACAGATCCAATGGATCCCAGCAGATGGATCGGAATTGGCACAAATTCACGTGTCAAAACCAGATGCA
CGCACGCAAGCGCCGAGCAGGCATTGGCGAGACAAACGCAGAAGCATTCTGATCGAGTTCCCGACAACTTGCACTCAAAG
GCCGGCTGTTCACTCATGAATCCATGAAGATAAGCTTAAGACCAATTTACGGGAATCACTGGGAGTGTTACA--------
TGTCACGTGTCTGGCCAAGATGCAATGCACACAGCGGCCAAAAACGGATGCACGCA------------------------
--------CGACGCGACCCTCTGGCCGCCCGCTTATAAAAGGAGCGCCTTGCGGTCTCGTTCCCGGCGAACAGCGACAGA
GTGAGGCGCTCAGCAAATAGACTCCACGCACGTAGATCGAGATGGTGCATAGGCTTACACACGACGAAGGTGACGAGGCT
GCCGCCACCACGGAGGGGACCAAGAGGGAGACGGCGGCGACGAGGAGGAGGACAAGGAGGCAAGGTGGTGGAGACGCCAT
CGCGGCGATCAAGAGGAGGATGCTGCGGTGCAGCGAGGCCGGAGAACGGGGGAGATTCAAGCGGAGCTACTTGGCAGGCG
CAGGCGGCGGCGAGCAGGGCGACGGCGCCTCCGCCGTCTTCTTCTACCTGGCCTGCATCGCCTGCGCCCCCGCTTA----
GTTCATCAGCTCCTCTTACCTATGTTGTATACACAGGTTGTAATCGCCTGACTGGAATCACACATAGTCCGCGTCAGCTC
ACCCCTGCTTTGTCAGTGGTAGGCTCAGGAATCA-------AGATGCTGTTGTTGTAAATATTTCTAAGTTG----AGTT
TTCTCCCTCAATTTTGGACTCCTCCGTAGTAAAATTAG----TAGAGCAAAGAAGGATTAAGCTTACATA--GTAAGATT
CAACAGGTAAACC-------------------------------------------------------------------
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----------------------------GCACTACAACTCTGATGCCATAATATCAAGCCGTCTAGCAAAATTGTACAGA
GCCAAGTGAGTTCAAAGCTCTGCTGTTATCACCTCCGACATCTTAAACCACCGCGAAAATCTGACCCT--CTCTGGAATC
TTGCAAATTGTCAGTTATAATTAAGGATCTGCAGCACTGATGCGACGCCTCTTTCGCCTCTCTCTCGAATCAACGCCCCT
GTTATAACCTACTTTCTTCATAGCTCTGCCCTCCAGGCCAATATCCACTTTTGGAGGGTTCCTAAAGCAGAATGATGCAG
CTACGTCCTGCCAAATTATAATGAACTGGACATTAGTCTTTTTCTTGTCT-TTTTCTGTCAAGTCCCAAACTCCAACTTG
GGGGTGATGAAAATAATATCAGCAAGTACTTCCGAGAGATGCTTACCAAAAAATAAGAAAAAGACAAGTGTGCTTCTA--
-CATGCTAGGTAGAACAATTGAAATTGTAAAACGGCCAAATG-AAAAATATATAGACCCCGCAAAAAAGATCGACAAGCA
TTTTACCTTCAAACTGAGACCATGAACATTAAAGATGTCTTTCATGGTGTGTGAGTTGTATGCTAGAATGTAGGATCTGT
AGGCTTGTTGAGCTGACTGATGCAGGAAGTAGTTCTCGCCAACGATTTTCTCCTGCTCAACAAATTGAGTTGTAACTTGT
TATTAACATGTGAG------AAAAAGTGGATTGGAACACTCAAGTGTGGTAAAAGATACACTTACAAAATGTGCTTGCAG
ATTTGG
>chr7B_37
AGCAATG--------------------------------------ATAGCATGCTCAAATCGATCAAGCGTACGAGCGCA
GCATTTCCAGATGAACCGATCCAATGGATCCCAGAATTCGCACAGATTCACGCGT----CAAACCGGATGCACGCACCGC
AAGCACGGAGCAGGAATTCTGAGCCTCGGATC-------------------------GAGTAGATGGCCGATTCTATTCC
AGGAATCGAAAGCCCGAATTCTGAGCCTCGGATGCCACCCCGACACCGA-------TGTCCTCTCTCGGATGCTCTGTTG
CACGGTCCTGCAGGCTGCAGCTCATGTTAATGACTGCCGCCTGCGTAACGTTAGCCACGGTCGGCGCTCTGATTCCTCTG
AATCCCGATCGCATCTGCTCATCGATCCATCCATACATCGACCCATTTTTTTTTTTCAAAACGGAGGCAAAAGTTTTGCC
TCATCGATTAAATTAGGAGAAGAGAGTTGCTTGGTTAATTAGGGAAAACCGAGCAAAAACCCTCACAACCGCTGAGCGGC
ACACATAAGATACTCCACACACCACTTCAACGATGGTCTCGTCGAGACAGCACGCAAGTGTCATCGTCATCACTCCTCTC
TTAGAGTCGTCATCGCCATCCCTACACTCTGAGCAAACGACTCCGACTTCGCAGCAGGCGATCGTCGACTCAACCCACAC
CAAAGCGGACGCGTGAAGCTACATGAAGATCTGCGCCAAATCTCAGCCACCTGCGGCCAGACAGCGCAGCTCCGACTCTG
ACGGAGAACTCTGAAGAACAGAACCAGGCACGGCTGGCGCCACGGGAGATCGCCGAACGGGCACCTGCAGTCGGTCATCG
TATACCACAGGGCCCCGCCACCGCAGCTTCGACTCCACAACAACAAACAACCCGAGGCAAAACCGCGGACACGCCGGAGA
AGAGCCGACTACCGCAACCATTGTCGCGTCGTCGACATCGCTCCCACCGTCATCTTTGCCACAGAAACCTGGTCGCCACA
ACCGCCGCCATCCACGGGTCCCGCCCACCGATGCCGGGCTCCCAAGACGAAGCCCCCAAGAGGGAAAACGACGCCAAGGC
GCCGCCATCGTCCGATCACAGATCAAGGGTTTCCCCCGGATAGGCCGAGATGGCCGGATCCGTGCAGGAGGGGAGCGGCA
ACAAAACAGCGATGCCTTCAGGAAGGTCAACGACGGCCACAACCGCCGCCATCACTGGTCACGGCACAAGACCGGGACAG
GGTTTTCACCCAAGCTCCCACACCACCTCAGCCACACATCATCCCGCACCGGCACCAGCGAGCCCACCAACCACCACCAC
CATCAGAGCTACCCAACGGCGAAACAGCATCACCCACAGCTGGGGCGCTCTTCGCCGACAACCCGGGCCACCGACCCGCG
CATCACCAGGGCGTCCTCGTGACGTCCTGCCGCGCCCCTCGCGGTCGAAGCCGCCACCCGAGCCCGCCCCCGCACCACAG
GGCCATAGGCGCCGCACGTCGCTGCGCCAGATCCGCGCCCGGCCGCGCCCGCCCACGGCACCACGGCGCCAGGAAGCAGC
AGCACCTGGGAGACGCCACTCTGCGCCGACCGGCCGGCCACCATCTCCACGCCGACGGGCCAAACGCCGCCGCCCGACCC
GAGCTCGGCCCTCAGATCCACCGCGAGTCAACGCCCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCCATCTGGTCGCAGCAGCAGCAGGCGTATTACATGAGCTTAA
CAATATCCCATCTTTAATTCTCTCAAGGTCAACACAGTGTTAGTTTAACTGTCAGCTTCCCTGCAACGCTTGGATCCACA
TGTAATGGATTCAGGACGGCTTGCCTCGATAACTGAAGCCCACCACAGCGTATTCAAATCGGTGAAGCGTACACGCGCAT
CATTTCAGGATGAACAGATCCAATGGATCCCAGCAGATGGA-CGGAATTGGCACAAATTCACGCGTCAAAACCAGATGCA
CGCACGCAAGCACCGAGCAGG-----GCAAGACAAACGCAGGAGCATTCTGATCGAGTTCCCGTCAATTTGCACTCATCT
CAAGT-------------AATCCATGGAGATAAGCTTA-GACCAATCAACGGGAATCACTGGGTGTGTTACA--------
TGTCACGCACGTAA-------------------------AAAAATGGATGCACGCTCGTTTAAAAAAAAT----ATGGAT
GCACGACGCGACGCGACCCTCTGGCCGCCCGCTTATAAAAGGAGCGCCGTGCGGTCTCGTTCCCGGCGAACAGCGACAGA
GTGAGGCGTTCAGCTAATAGACTCCACATAC--AGATCGAGATGGTGCACAGGCTTACACACGA---AGGTGAAGAGGCT
GCCCTCACCATGGAGGGGAGGAAGAGGGAGTCGACGGCGACAAGGAGGAGGAGAAGGAGGCAAGGTGGCGGAGACGCCAT
CGCGGCGATCAAGAGGAGGATGCTGCGTTGCAGCGAGGCCGGAGAACGGGTGAGGTTCAAGCGGAGCTACTTGGCAGGCG
CAGGCGGCGGCGAGCAGGGCGACGGCGCCTCCGCCGTCTTCTTCTACCTGGCCTGCATCGCCTGTGCGCCGGCTTA----
GTTCATCAGCTCCTCTTTCCTGTGTTC--TACACAGGTTGTAATTGCCTGATTGGAATCATATATAGTCCGCGTTAGCTC
ACTACTCCGTTGTCAGTGGTAGGCTCTCAGGAATCAAGATGAGATGCTCTTGTCGTAAATATTTGAGTTATTTCTAAGTT
TTCTCTCTCAATTTTT-ACTCCTCCGTAGTAAAATTTTAAAATAGGGCAAAGAAGGATTAAGCTTACATATAGTAAGATT
CAACAGGTAAACC-------------------------------------------------------------------
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----------------------------GCACTACAACTCTGATGCCATAATATCAAGTCGTCTAGCAAAATTGTACAGA
GCCAAGTGACTTCAAAGCTCTGGTGTTATCACCTCCGACATCTTAAACCACCGAGAAAATCTGACCCT--CTCTGGAATC
TTGCAAACTGCCAGTTATAATTAAGGATTTGCAGCATTGATGCGACGCCTCTTTCGCCTCTCTCTCGAATCAAGGCCTCT
GTTATAACCTACTTTCTTCATAGCTCTGCCCTCGAGGCCAATGTCCACTTTTGGAGGGTTCCTAAAGCAGAATGATGCAG
CTACGTCCTGCCAAATTATAGTGAACTGGGCATTAGTCTTTTTTTTTCCGTCTTTTTGTCAAGTCCCAAACTCCAATTTG
GGGGTGATGAAAATAATATCAGCAAGTACTTCCGAGAGGTGCTCACCTAAAAATAAGAAAAAGACAAGTGTGCTTCTA--
-CATGCTAGGTAGAACAACTGAAATTGTAAAACGGCCAAATG-AAAAA-ATACAGATCCCGCAAAAAAGTTCGACAAGCA
TTTTACCTTCAAACTGAGACTATGAACCTTAAAGATGTCTTTCATTGCGTGTGAGTTGTATGCTAGAATGTAGGATCTGT
AGGCTTGTTGAGCTGACTGGTGTAGGAAGTAGTTCTCGCCAATGATTTTCTCCTGCTCAACAAATTGAGTTGTAACTTGT
TATTAACATATTAGATTAGAAAAAAGTGGATTGGAACACTCAAGAGTGGCAAAAGATACACTTACAAAATGTGCTTGCAG
ATTTGG
>chr7D_67
------------------------------------------------------------------AGCGTACGAGCACA
GCATTTCCAGATGAACCGATCCAATGGATCCCAGAATTCGCACAAATTCACGCGT----CAAACCGGATGCACGCACCGC
AAG---------------ACAAATGCAGAAACATTACGATCGAGTTTCCGCTCCCATGAGTAGATGGCCAATTCTATTCC
AGGAATCGAAAGCCCGAATTCTGAGCCTCGGATGCCACCCCGACACCGAAATGAGATGTCCTCTCTCGGATGCTCTGTTA
CTCGCTCCTGCAGGCTGCAGCTGACGTTAATGACTGCCGCCTGCGTAACGTTAGCCACGGTCGGCGCTCTGAATCC----
-----CGATCGCATCTGCTCATCGATCCATCCATACATCGACCCATGCATCTGGTAGCA---------------------
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------------------------------------------------GCAGCAGCAGCAGGCGTATTACGTGAGCTTAA
CAATATCCCATCTTTAATTCTCTCAAGGTCAACACAGTGCAAGCTTAACTGTCAGCTTCCCCGCAACGCTTGGATCCACA
TGTAATGGATTCAGGACGGCTTGCCTCGATAACTGAAGCCCACCACAGCGTATTCAAATCGGTGAAGCGTACACGCGCAT
CGTTTCAGGATGAACAGATCCAATGGATCCCAGCAGATGGATCGGAATTGGCACAAATTCACGCGTCAAAACCAGATGCA
CGCACGCAAGCACCGAGCAGG-----GCAAGACAAACGCAGGAGCATTCTGAT--------CGTCAATTTGCACTCATCT
CAAGT-------------AATCCATGGAGATAAGCTTA-GACCAATCAACGGGAATCACTGGGTGTGTTACACGTCACGC
TGTCACGCACGTAA-------------------------AAAAATGGATGCACGCTCGTTTAAAAAAAAAAGAAATGGAT
GCACGACGCGACGCGACCCTCTGGCCGCCCGCTTATAAAAGGAGCGCCGTGCGGTCTCGTTCCCGGCGAACAGCAACAGA
GTGAGGCGCTCACCAAATAGACTTCACACAC--AGATCGAGATGGTGCACAGGCTTACACACGACGAAGGTGACGAGGCT
GCCGCCACCACGGAGGGGAGGAAGAGGGAGACGACGGCGACAAGGAGGAGG---AGGAGGCAAGGTGGCGGAGACGCCAT
CGCGGCGATCAAGAGGAGGATGCTGCGGTGCAGCGAGGCCGGAGAACGGGTGAGGTTCAAGCGGAGCTACTTGGCAGGCG
CGGGCGGCGGCGAGCAGGGCGACGGCGCCTCCGCCGTCTTCTTCTACCTGGCCTGCATCGCCTGTGCGCCGGCTTAATTA
GTTCATCAGCTCCTCTTTCCTGTGTTC--TACACAGGTTGTAATTGCCTGATTGGAATCATATATAGTCCGCGTTAGCTC
ACTACTCCGTTGTCAGTGGTAGGCTCTCAGGAATCAAGATGAGATGCTCTGGTCGTAAATATTTCAGTTATTTCTAAGTT
TTCTCTCTCAATTTTT-ACTCCTCCGTAGTAAAATTTGAAAATAGGGCAAAGAAGGATTAAGCTTACATATACTCCCTCC
GTTCCTAAATACTTCTTTCTAGGCATTTCAACAAGTGACTACATACGGAGTAAAATGAGTGAATCTACACTCTAAAATAT
GTCTACATACATCCGTATGTGATAGTCATTTGAAATGCCTAGAAAGACAAGTATTTAGGAACGGAGGGAGTAGTAAGCAC
TACAACGAGTCGCAAAAAAAAAAAGTAAGCACTACAACTCTGATGCCATAATATCAAGTCGTCTAGCAAAATTGTACAGA
GCCAAGTGACTTCAAAGCTCTGGTTTTATCACCTCCGATATCTTAAACCACCGAGAAAATCTGACCCTCTCTCTGGAATC
TTGCAAACTGCCGGTTGTAATTAAGGATTTGCAGCATTGATGCGACGCCTCGTTCGCCTCTCTCTCGAATCAGGGCCTCT
GTTATAACCTACTTTCTTCATAGCTCTGCCCTCCAGGCCAATATCCACTTTTGGAGGGTTCCTAAAGCAGAATGATGCAG
CTACGTCCTGCCAAATTATAGTGAATTTGACATTAGTCTCCTTTTTTCGTCTTTTTTGTCAAGTCCCAAACTCCAATTTG
GGGGTGATGAAAATAATATCAGCAAGTACTTCCGAGAGGTGCTCACCGAAAAATAAGAAAAAGACAAGTGTGCTTCTAGT
ACATGCTAGGTAGAACAATTGAAATTGTAAAACAGCCAAATGAAAAAA-ATACAGATCCCGCAAAAAAGTTCGACAAGCA
TTTTACCTTCAAACTGAGACTATGAACATTAAAGATGTCTTTCATGGCGTGTGAGTTGTATGCTAGAATGTAGGATCTGT
AGGCTTGTTGAGCTGACTGGTGTAGGAAGTAGTTCTCGCCAACGATTTTCTCCTGCTCAACAAATTGAGTTGTAACTTGT
TATTAACATATT--ATTAGAGAAAAGTGGATAGGAACACTCAAGAGTGGTAAAAGATACACTTACAAAATGTGCTTGCAG
ATTTGG
>SNPs
S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S---------S-----------------
--------------------------------------S-----------S----SSSS---------SS----------
-------S------S-SS------------S--------S----S-------------------S---------------
-S-----------------------------------------------S---------S--------------------
-------------------SS------------------------------------------------------S----
----------------SS--------S-----------------------------------------------------
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------------------------------------------------------------S-------------------
------------------------S----------S-------------------------SSSSSSSSS----------
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---------------------------------------------------------------S----------------
-----------S---------SSSSS--S------------S---------------------S---S---------SSS
SSS-SSSSSSSSSSSSSS--------S-----------S-------SS---------------S----------------
-------SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSS-----S----------S------------------------
------------------------------------------------S-------------------------------
---------------------------S---SS----------------S------------------------------
-------------------SS------------S-------S----------S---------------S-----------
--------------------------------------------------S---S-------------------------
----------------------------------------------------------------S--S--S---------
-----------------S---S----SSS---------------S------S--------S-S-----------S-----
--SS--S-S-----------------SSSSSSSS--------------S----S-----------SSSSS-S--------
-----S---------SS-------------------S--------S----------------------------------
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----------------------------------------------------------S---------------------
---------S------------S------------------------------S--------------------------
-------S--S-----------------S-------S------------------------------------S---S--
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--------------------S----------------------S--SS-------S--------------------S---
--------------------------------------S----S---S--------------------------------
------------------------------------------------S---S---S------------S----------
--------------------S--------------------------S--------------------------------
-------------------S--S---------------------------------------------------------
---------S-S--------------------------------S-----------------------------------
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>forward_2416
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----------------------------------------------------------------------------TACA
TGTCACGTGTCTGGCC----------------------------------------------------------------
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>reverse_3940
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-------------------ATGCAGGAAGTAGTTCTCGCC----------------------------------------
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