>input_sequence_85234
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------------------------------------------------------ATGGCTCGAGGTCTCGCCGTTGCGAT
GCTCCTGCTCGTCGCCATCGCGGCGGTAGCACCATTGTCCTACGCTGGCTCAGAGGTCGCTCTTACCGATGGAGTGGCAA
CTACCACTACAACCGGTGAAAGCTTCTCAACCGGCCTCCCGCTCTACCGAGAAATCGGGAAACCCGCTAAGGATGCTGCC
AACGCTGCTGGTGATTCCGTGGTTAGTGGCGGCCTCGCCTCTGGCCTCCCACTTTACCAGGAAACTGGGTCGGGAGAGAA
GAAAGCTTAG----------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G136500
CCTCCTTATGAGGTAAAACCCTAGTCTTTCTCGCGTATATTGTGATTGGGGTGAACAAAGTATAGGTAATACCAAGAGAT
TTTATTATGTTCCATCGACTAGCTCGGTCCCATCTTATAGAAGATATCAGGACCCGGGTTATACAATCTAGTCGGCTACA
TCGGTGGAGGGGAGTACTCCATGGATCTGGCTTCCTTGTCTGTTTTTGTGAGGACCGGCTTCCTTGTCTTGAATGACAAG
TCCTCCAGATTCTTCCTTCTACATGACCCATGGGCCGGCATGATGGACCAGGGCGGAACCAACCTATGGGGCCTCGAGCT
ACCCTACTTAGGCCGATGACCAACAAGGTGAAGCACCCCATGGCCATAACACCATCACGTCATGAAGCCGAAGCCAGGTT
CATGGCATGCAAAGCCCATGATGCCCTCGATCAGGCCGCTGAGCAAAAGGAAGTTGTTGTACCCATCGTCGCTCCGACCG
ACACTAACAATGTCCACTCATATGTGTTTGACGAGAAGGTGTCCTCACGGGCTCCAGCCATCGTGATAATAGACTAGAAT
TATTTCTAACGTAAGGTGATAATGCATCTACTTTCATAACAAAAAAGGGTTATGTTTAAGGATAACGCTGGATGGCCTAT
GTCTCGTCAGATGTTCGTGAACAAGCTCGGAAGTTTCTGCGGACATATATAAGGGTGTTTATTTAAGGATCTGTGTTGAA
GATGTCCTTCTATTTTGGATCACCAAAACCTCATTATCAAACATTGGGCACTCACGACCACTAACTTCTACCTCATGTCC
AATATGTGAAGAATTTGGGATGGCCAAATATAACCTGAAGGTCTAATCTTGGCACATGGCATAGCCAACTACCTACCTGC
ATGCAACTATTTTTTATCCTTCCCTGTCCG--------------ATAAATGCAATATGCACGTACACGTACCACCTCACA
AGTGGCAACACCATGCCTGATCATCGTCAAGCAAACAATAACCCGACGGGAACAATGGCTCGAGGTCTCGCCGTTGCGAT
GCTCCTGCTCGTCGCCATCGCGGCGGTAGCACCATTGTCCTACGCTGGCTCAGAGGTCGCTCTTACCGATGGAGTGGCAA
CTACCACTACAACCGGTGAAAGCTTCTCAACCGGCCTCCCGCTCTACCGAGAAATCGGGAAACCCGCTAAGGATGCTGCC
AACGCTGCTGGTGATTCCGTGGTTAGTGGCGGCCTCGCCTCTGGCCTCCCACTTTACCAGGAAACTGGGTCGGGAGAGAA
GAAAGCTTAGTCTGGGCTACTCCACTTCGATATGCGTTGGGTGCCTGCGTGGCCAGGTGCTCAACAACGGTCAAACAACA
ATATGTATGTAACTAAAAAATAGGTATAAGTGTATGTATATGATATATCCAAATTAAACAGTTTGCTCCATACATATGAA
ATGGGACCATTGAAGAGATACAAAGGAGTTCCTAAGGGTGGGAATGATGGCGGAGAGCACGAGCGCATGCCCTCACCCTA
TCCAACCACCCACTTAGCCTCGCCGGCCGTGGGCTTCTCTAGCCCCTGCCAGACATCCACGTCATGGGGAGGTCGGAGTC
CCTGCGGACTAGACTTCACCGACAGCCCCCTCTCGTCTCCATCGCCCTCCCCACCTACCGCCGCGGCTTCTCTCAAGGAG
GCTCTGCTTGTTGCGCTCGTCGCCTGCACGGCTAACTCTGCTAGTTCCAGCTACCCCCATCCTGCCGTCCACTCCACCCC
TGCCTTGTGTGCAATTAATGGAGGCCAACTACACGTGCGTGCATGTTCACACCCCCCTGGGCTCGCGTAGCGGAGATTGC
GGCACGCCTGCTCCTTCGTGTGGCTTTCATGGAGGGCCGCTGCCCGCGGGCAGGGCTCCAGGCCCCTCTGGGCCATCTCC
TGTTGTTGTGTGCACAACATTTGTGCCTGCCCCCTGGCCTGCTGCCTGGATGGTGCGCCAGAGTAAAAGCTCGTGGAAGA
AGTTGTGCAGGGCACGCTGTCAAGAAGAGCAGCACCACATTCATGGCGTCTTTACACTCCTCTGTGTTGGGGAACGTAGC
AGAATTTTAAAATTTTCTACGCATCACCAAGATCAATCTATGGAGTCATCTAGCAACGAGGGAAAGAGGAGTGCATCTAC
ATACCCTTGTAGATCACGAGCGGAAGCGTTCAAGAGAACGGGGTTGATGGAGTCATACTCGACGTGATTCAAATCACCAA
TGACCAAGTGCCGAACGGACAGCACCTCTGCGTTCAACACACGTACGGTT
>chr5D_217
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--------------------------------------------------------GGCTTCCTTGTCTTGAATGACAAG
TCTTCTAGAGTCTTCCTTCTACATGG-CCATGGGCCGACATAATGGACCATGGTGGAACCAACCTACGGGGCCTCGAGCC
GGCCTACTTAGGACGACAAGCAACAAGGTGAAGCACCCATTGGCCATAACACCATCACGTCACGAAGCCAGAGCCAAGGT
TGTGGCATGCAAAGCCCGTGACCCCCTTATCGTAAAACACATGCAGAAGAAAGTGACTATACCCGTTACCGCTCCGGCCG
ACACTGACGATGTCCACTCAGATGTGTTTGAC---AAGGTGTCTTCACGGGCTTCCGCCATCATGATAATAGATTAGAAT
TATTTCTAATGTAAGGTGGTAATGCATCTACTTTCATA--AAAAAAAGATTATATTTAAGGATATCGTTGGATGGCCTAT
ATCACGTG-GATGTTCGTCAACAAGCTCGGAAGTTTCTGCGGACATATATAAGGGTGTTTGTTTGAGGAAGCGTCAGCAA
AAT-----------------------AACCTCATTTTCAACGCTGGGCACG-CATGACCACTAGCCTCTACCGCAGGTCC
AATATGTGAAG---TTGGGATGGGCAAATATAATCTGAAGGTCTAATCTTGGCACACGGCATGGCCAACGACCAACCTGC
ACTA------TTTTTATCCTTCCCTGTCCGGTCCCAAGGTATATATAAACGCAATACGG------------------ACA
AGTGGTAACACCACGCCTGATCATCGTCAAGCAACCAATAACCCGTCAGGAACAATGGCTCGAGGTCTCGCCGTTGCGGT
GCTCCTGCTCGTCGTCGTCGCGGCAGCGGCACAATTCGCCTGCGCTGGCCCAGAGGCCGCTCTTACCGCTGGAGGGGCAA
CTGCCACTCCGGCCGGTGGCAGCTTCGATACCGGCCTCCCGCTCTACCGGGAAGCCGGGAAACCCGCGAAGGATGCCGCC
AACGCTGCCGACCCTTCCGCGGTCAGTGGCGGCCTCGCCACCGGCCTCCCGCTTTACCTCGAAACCGGGTCGGGAGAGAA
GAAGGCTTAATCTGGGCTACTCCACTTCAACACGGG--------CTGGGTGGCCAGGTGCTCAACAACGGTCAAACAACA
AATATGTACTGTA-------------------------------------------------------------------
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>chr5B_765
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-------------------------------------------TGGGCACA-CATGACCACTAGCCTCTACCTCATGTCC
AATATGTGAAG---TTGGGATGGCCAAATATAATCTGAAGGTCTAATCTTGGCACACGGCATGGCCAACGACCAACCTGC
ACTA------TTTTTATCCTTCCCTGTCCGGTCCCAAGGTATATATAAACGCAATACGG------------------ACA
AGTGGTAACCCCACGCCTGATCATCGTCAAGCAACCAATAACCCGTCAGGAACAATGGCTCGAGGTCTCGCCGTTGCGGT
GCTCCTGCTCGTCGTCGTCGCGGCAGCGGCACAATTCGCCTGCGCTGGCCCAGAGGCCGCTCTTACCGCTGGAGGGGCAA
CTGCCACTGCGGCCAGTGGCAGCTTCGATACCGGCCTCCCGCTCTACCGGGAAGCCGGGAAACCCGCGAAGGATGCCGCC
AACGTTGCCGACCCTTCCGCGGTCAGTGGCGGCCTCTCCACCGGCCTCCCGCTTTACCT------------GGGAGAAAA
GAAGGCTTAATCTGGGCTGCTCCACTTCAATATGGG--------CTGGGTGGCCAGGTGCTCAACAACGGTCAAACAACA
AATATGTACTGTA-------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------
--S--S---S---------------SS----------S---S--------S--S------------S------------S
SS----------S---SS-S------------------SS----------------------S------SS-----S-S-
SS---------------S---SS----SSSSSSSSSSSSSSS---S---S----SSS-S-----S-SSS-------S---
-----S--S-----------S-----------SSS--------S---------S-S------S----------S------
---------S--------S-------------------SS------S-S----S----------S--S------------
S--S---SS---------S-----------------------------------------S---S----SSS--SSSS--
S--SSSSSSSSSSSSSSSSSSSSSSS---------S----SSS-S--SSSSS--S--------S-S--------------
-----------SSS-------------------S----------------------S-----S------S---S------
-SSSSSSSSS---------------------------------------S------S-SSSSSSSSSSSSSSSSSSS---
-----S-------S--------------------S----------S-S------------------------------S-
--------------S-S-------S-SS----S---SS---S-------S------S-----------S-----S-----
--S-----S-SS------SS------SSS--------------------S---SS------------S--------S---
--------S-SSSS-----S---S---------------S-S--------S-------SS-----S--------------
---S-----S------------------S-----S-SSSSSSSS---S--------------------------------
-SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_179
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-------------------------------------------------------------------------------A
TCGGTGGAGGGGAGTACTC-------------------------------------------------------------
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>reverse_2179
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------------------AGCGGAAGCGTTCAAGAGAA------------------------------------------
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