>input_sequence_85159
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--------------------------------------------------ATGTCCGGCCGCTCCTTGGGGTTCTTGCCG
AGGCACCGGTCCGCCAGCCTCGCCGCCTCGCGCGCGGTGGCCAGCGGGTACCGCCCGCCCAGCCGCGGGTCCATGATGGT
CCTGAAGCTGTCCCCTCCGGGCGGGTGCTGGCGCACCCACCCCAGCAGCTTCTGCTCCTCCGCCGGCCGGCTGCGCTCCA
CCGACCGCCGCCCCGTCAGGATCTCGTACAGCACCACCCCGAACCCCCACACGTCGCTCTTCACCGTGAGGTGCCCCGTC
TCGATGTAG-----------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G382000
ACTTCATTGCTTACTTGACTATGGCTTGTCTAGTGTAGTCTACCTTCCACTGCATCAATAGGTTCATTTCTATTGGTTGT
CTTCAAAACCCCTGTGTTTTGAAGACTTTGATAAAAATCGCATATTCACCCCCCTCTAGTCGATAACTAGCACCTTCACT
AACCTTTTCGTGTAGCGCCTGACAGCGAGGCGTCACACTATACTGTGCAGCGCCTGATTGGTAGGCGCTACATGTTTGGC
CATCGTCACACTTCAGACTGACTAAAAATTGCTAAGTTAATGTGCAACGCCTGTATAATATAGCGCCTATGCACTAGTGG
CCGCAGCGTTCTTGATTTTGGATGCACTATATATCATGAAGAAGGTGCATGTGGCTCAACCATCAATCAAATCGGAGTTG
GACGAGCGCCTCACTCTTGTCCTCTTCCCTGCGGCCCCACCCACAGGTGGATGGATACCTCTCCTTTTCCTGTGCTCGCT
TAGGTGCGCATGTGTGCCTCTGGACTGTGGTAGCTAGTACTCCGTAGATAGTTTACGATGAGAGAGTAACAAATTTCCGG
TCAAACTAATACTCTAGCCATCCTCCAAACCCAAGAACGCTGCGGCCACTAGTGCAGCGCCTACGCGCTAGGCGCTACTC
TTAGGCGTTGCACACTAACTTAGTAATTTTTAGACAATTTAGAGTATGAAGCTGGCCAGACGTGTGGCACCTGCCAGTCA
GGCGCTGCACAGTGTAGTGTGGCGCCTCGCTGTCGGGAGGAGTGAAATTTTTTCAAACACAGTTCACTTCGTGAATTTTT
TTTCTATTAAATTTGTCGTTTTTTGCCGAGAAACCGCGACTCCTCATCACTGATTCTGAATTTCTG------ACTACTGG
TATTCCGCCCGCCTGCTTGCAGTGGTGCAGCCAATAGCCGTTAATCGAATGATCGATCACCG----CTTGGGCGTCGCCG
GGGCCGGCTCCATCCGCAGCACGCGCTCGAGCTCCTCCACGACCTCCGCCATGTCCGGCCGCTCCTTGGGGTTCTTGCCG
AGGCACCGGTCCGCCAGCCTCGCCGCCTCGCGCGCGGTGGCCAGCGGGTACCGCCCGCCCAGCCGCGGGTCCATGATGGT
CCTGAAGCTGTCCCCTCCGGGCGGGTGCTGGCGCACCCACCCCAGCAGCTTCTGCTCCTCCGCCGGCCGGCTGCGCTCCA
CCGACCGCCGCCCCGTCAGGATCTCGTACAGCACCACCCCGAACCCCCACACGTCGCTCTTCACCGTGAGGTGCCCCGTC
TCGATGTAGTCCGGCGCCGCGTAGCCGTGCGTGCCCACCACCGCCGTCGACACGTGCGTCCGCCCCTCCGTCGGCCCCTC
CCTCGCCAGCCCGAAGTCCGACAGCTTCGGCCGGAACTCGCCGTCCAGGAGCACGTTCGACGCCTTGAAGTCCCTGTATA
TCACCTGCCACACTAAAACGCCGCCGGATCAGCCTCGCCGGACCGACCAAGAACCATCGAAGAACTCGACCGGCCGACGC
TGTCGACGGCGAAATTAACCTGGACTTCCGGGAGGCCGCGGTGGAGGTAGTCGAGGCCGCGCGCGGCGCCGGCCATGATC
TGCAGCCTCGTCCTCCAGGGCAGCGGCGGGTGGGCTCGGCTGAAGAGGTGGTCGTCCAGGGTCTTGTTGGGCATGAACTC
GTACACCAGCAGCCTGTGCTTGCCGGCCTCCGAGTCCACCGCGCAGTAGCCCACGAGCTTCACCAGGTTCGGGTGCTCCA
GGACGCCCAGGAACTGCACCTCGGCAAGCCACTGCTTGTGCCCCTGAAATCATCATCAGAAATCCCCGTAAAAGATTACA
AGATGG----TTGATTATGAATGA---ATGAATGAATTCTACTG-----------CGATTTAATATGAGTATCGTGATGC
AGATGCTGTCCCGATCGGGTGTGGAGCCTGGACCGAAGTTCACGTGGTGGTTGCGCGGTGCGAATTCTCATTGAAGGCGA
CATGAGTGGGCGTCCTTGTGCCCGGTGGATACGTTTATTGC-------TATCTTATTAAGATTCTGAGTTCATCATGGAG
CTCAAGATTTCTACTAGGAGCGATTCTCGAAGAATCTACTAGCTTTCTGACCTGCAGGCTGCGCTGGTTGAGGCGCTTGA
CGGCGAGGACGACGCGGCCGCCGGCGGCGGAGCGGAAGAAGGCGCGGTAGACGGAGCCGAAGCCGCCCTCGCCGATCTTG
AGCGCGCGGCTGAAGCCGTTGGTGGCGCTGCCGAGCTCCTCCAGCCCGAACACGCGCAGCCGCGCCGCGCCCCG
>chr7B_825
GCA-----------------------------------------------------------------------------
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---------------------------GAGAAACCGCGACTCCTCATCACTGATTCAGTGATTCTGACTACTACTACTAG
TATTCTGCCGGTCTGCGGTGCAGCTAACAC-----AGCCGTCGATCGAATGATCGATCGGTCATCTCTTGGGCGTCGCCG
GGGCCGGCTCCATCTGCAGCACCCGCTCGAGCTCCTCCACGACCTCCGCCATCGCCGGCCGCTCCTTGGGGTTCTTGCCG
AGGCACCGGTCCGCCAGCCTCGCCGCCTCGCGCGCGGCCGCCAGCGGGTACCGCCCGCCCAGCCGCGGGTCCATGATGGT
CCTGAAGCTGTCCCCTCCGGGCGGGTGCCGCCGCACCCACCCCAGCAGCTTCTGCTCCTCCGCCGGCCGGCTCCGCTCCA
CCGACCGCCGCCCCGTCAGGATCTCGTACAGCACCACCCCGAACCCCCACACGTCGCTCTTCACCGTCAGGTGCCCCGTC
TCGATGTAGTCCGGCGCCGCGTAGCCGTGCGTGCCCACCACCGCCGTCGACACGTGCGTCCGCCCCTCCGTCGGCCCCTC
CCTCGCCAGCCCGAAGTCCGACAGCTTCGGCCGGAACTCGCCGTCCAGGAGCACGTTGGAGGCCTTGAAGTCCCTGTATA
TCACCTGCCACACTAAAACGCCGCCGGATCAGCCTCGCCGGACCGACCAAGAACCATCAAAGAACTCGACCGACC----C
TCTCGACGACGAAATTAACCTGGACTTCCGGGAGGCCACGGTGGAGGTAGTCGAGGCCGCGCGCGGCGCCGGCCATGATC
TGCAGCCTCGTCCTCCAGGGGAGCGGCGGGTGGGCTCGGCTGAAGAGGTGGTCGTCCAGGGTCTTGTTGGGCATGAACTC
GTACACCAGCAGCCTGTGCTTGCCCGCCTCCGAGTCCACCGCGCAGTAGCCGACGAGCTTCACCAGGTTCGGGTGCTCCA
GGACGCACAGGAACTGCACCTCAGCAAGCCACTGCTTGTGCCCCTGAAATCATCATCAGAAATCCCCATAAAAGATTACA
AGATGC----TTGATTAATGATT----ATGAATGAATTCTACTAGTGCAGGAGTACAATTTAATTTGAGTAGTGTGAT--
----GCTGTCCCGATCGGGTGTGGAGCCTGCACCGAAGTTCACGTGGTGGTTGAGCTCTGCGAATTCTCATTGAAGGTGA
CATGAGTGGGCGTCCTTGTCCCCGGTGGATATGTTTATTGC-------TATG---CTAAGGTTCTGAGTTCGTCATGGAG
CTCAAGATTTCTACTAGGAGCAATTCTCGAAGAATT---TAGGTTTCTGACCTGTAAGCTGCGTTGGTTGAGGCGCTTGA
CGGCGAGGACGACGCGGCCGCCGGCGGCGGAGCGGAAGAAGGCGCGGTAGACGGAGCCGAAGCCGCCCTCGCCGATCTTG
AGCGCGCGGCTGAAGCCGTTGGTGGCGCTGCCGAGCTCCTCCAGGCCGAACACGCGGAGCCCCGCCGCACCCCG
>chr7A_949
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------------------------------------------------------------------------------CG
GGGCCGGCTCCATCCGCAGCACCCGCTCGAGCTCCTCCACGACCTCCGCCATGGCCGGCCGCTCCTTGGGGTTCTTGCCG
AGGCAGCGGTCGGCCAGCCTCGCCGCGTCGCGCGCGGCGGCCAGCGGGTACCGCCCGCCCAGCCGCGGGTCCATGATGGT
CCTGAAGCTGTCCCCTCCGGGCGGGTGCCGGCGCACCCACCCCAGCAGCTTCTGCTCCTCCGCCGGCCGGCTGCGCTCCA
CCGACCGCCGCCCCGTCAGGATCTCGTACAGCACCACCCCGAACCCCCACACGTCGCTCTTCACCGTGAGGTGCCCCGTC
TCGATGTAGTCCGGCGCCGCGTAGCCGTGCGTGCCCACCACCGCCGTCGACACGTGCGTCCGCCCCTCCGTCGGGCCCTC
CCGCGCCAGCCCGAAGTCCGACAGCTTCGGCCGGAACTCGCCGTCCAGCAGCACGTTCGACGCCTTGAAGTCCCTGTATA
TCACCTGCCACACTAAAACACCGCCGGATCAGCCTCGCCGGACCGGCTCAGACC---CAAAGAACTCGACTGGCCGGCGC
TCTCGACGGCGAAATTAACCTGGACTTCCGGGAGGCCGCGGTGGAGGTAGTCGAGGCCGCGCGCGGCGCCGGCCATGACC
TGCAGCCTCGTCCTCCAGGGGAGCGGCGGGTGGGCTCGGCTGAAGAGGTGGTCGTCCAGGGTCTTGTTGGGCATGAACTC
GTACACCAGCAGCCGGTGCTTGCTCGCCTCCGAGTCCACCGCGCAGTAGCCCACGAGCTTCACCAGGTTCGGGTGCTCCA
GGACGCCCAGGAACTGCACCTCGGCAAGCCACTGCTTGTGCCCCTGGAATCATCATCACAAATCCCCATAAAAGATTACA
AGATGCATGGTTGATTATGCATGATTCATGAATGAATTCTACAG-----------CAATTTAATACGAGTAGC-------
-------------------------------------GTTCACGTGGTGGTTGAGCGGTGCGAATTCTCATTGAAGGTGA
CATGAGTGGATGTCCTCGT-CCCGGTGGATATGTTTATTGTTATGACTTATG---TTAAGATTCTGAGTTCATCATGGAG
CTCGGGATTTGTG---GGAGCGACTCTCGAAGAATCTGCTAGCTTTCTGACCTGCAGGCTGCGCTGGTTGAGGCGCTTGA
CGGCGAGGACGACGCGGCCGCCGGCGGCGGAGCGGAAGAAGGCGCGGTAGACGGAGCCGAAGCCGCCCTCGCCGATCTTG
AGCGCGCGGCTGAAGCCGTTGGTGGCGCTGCCGAGCTCCTCCAGCCCGAACACGCGCAGCCGCGCCGCGCCCCG
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------S-SSS-----------------S-
-----S---S-S----SSSSSSSSSSS--SSSSSS------SS---------------SSSS------------------
----------------------S------------------------------S--------------------------
-------------------------------------S------------------------------------------
----------------------------S---------------------------------------------------
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----------------------------------------------------------S-----------------S---
-S------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
------------------------S-------------------------------------------------------
-------------------------------------------------------------------S------------
-----S-------------S------------------------------------S--------------S------SS
SSSS--------------------------S----------------------S-----------------------S--
-------------------S-----------S-------------------SSSS-------------------------
-------------------------------------S------------------------------------------
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>forward_245
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-----------------------------------------------------------------CGCTACATGTTTGGC
CATCG---------------------------------------------------------------------------
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>reverse_1912
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-----------------------------------------------------------------------TCGTGATGC
AGATGCTGTCC---------------------------------------------------------------------
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