>input_sequence_85124
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----------------------------------------------------------------------------ATGG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCCGTGGCTAGTTCAGGACTCCATTTACAAGCT
GCTCCGATAATTTCATTACCTTCGCGAGCAAGATCACGCCCTTCGTTACGAGCTTGTACACAGGATTCTAAAGCCACTCG
ATTAGCTGCTACACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACAAAATTGTAATACAGAATCCTCCCCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATGA---------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr1D_1_TraesCS1D01G170100
AAAAAAAATCATTGTATCGTTGGGTCGGAGCGGAGGTTTGGTCCAGAAAAATTAGGAACAAAACGTCTACTCTACCGCAT
TGAAGTCTATAGCGTTGTATTTCCATGAAAGTATAATTCTTACCATCAGGATACGATCCTTTCTTTTGAACTAAACGTCT
CTACGATGGGTCCAGGTTCTATGTCCAATCCCAAATCAAGGATTTCTCGCTCTTGATCGGAGTCATAAACTAAAAAAACT
A--------CCTTTTTCTCATGGTTATAGAGAACTTCCTTATCTAGTTCTAGCATTTTGAAAAAATGCTTCTTTATTTAC
ACACAGTTCGAGTCACTTGTT----------------------------------TCCTCTTTTTTGAAATTGAAAGAGA
GTCCTATAAAAAGGTCTAACTTCCAAACTGTGTCTTTTTTCATTCATTCTACTTTTGTTTATTTCTCTATCTAGAAGTGG
AATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATACATTGTATGGCCCAGAATAGGTCCTATTCTTCTAC
CTTTTCCACGTAGTCGATGGCTATTCACAGCTACCATCTTAACACCAAAGAAGAGTTTGACCCAATGCTTTATTTCTTTC
TTAGTGAATCCCGATTTGACATTAAAAGTATATTGATTCTTTCCCAATAAATGAAGACTTTTTTCTGTGAATATTTCGTA
TTTGATTCCATTATCATTATCATATGATAATAC-------TATTATTTTATTATTTTATTTGTATTTATTTATTGTATTA
TACCTTAATATATATGTTCTAGATATATAGAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTATT
TTTATCCCGCTCAATATTTTTT-AG-----AAA-----------------------------------------------
--------------------------------------------------------------------------------
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--AAAAGATTGAGCCGAGTTTAATTGCAA-TCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTGA-TTTTTT
TCTCTTTTTATTTTGTTTCTTTTTTTATTTATAC-----CT-----TCTTTATCTTTAGTTTTATCTAATTAATCGATGG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCCGTGGCTAGTTCAGGACTCCATTTACAAGCT
GCTCCGATAATTTCATTACCTTCGCGAGCAAGATCACGCCCTTCGTTACGAGCTTGTACACAGGATTCTAAAGCCACTCG
ATTAGCTGCTACACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACAAAATTGTAATACAGAATCCTCCCCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCCATATAACACCTGGCATGGATACCCAG
TCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAAGAAAACCTAAAGTCAT
TTCGCCTTCCCCTTCTAACTTACCTACTACTGTACCAGAGTGGATATGATCTCCCTCAGACATACGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTATCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGTCGCGACAATAATGAGCCAAAGTAGTATTTGCTATGAATCCCCCAGTTAAGTAGTCATGCACTACAATAGGAACCCC
TAATTCTCTTGCAAATACAACTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTT
CACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAG
TTTACGTTTTCATCAACTTTGGTAAAATCAGGTCCACCACATAGACACTCATAACATGCTCTACCATAATTTTTTGCGGA
TAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATAC
CTTGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGATTTG
AAACCAAATATGTTACCTACAATGGAAGTAAACATGTTAGTAACAGAACCGTCTTCAAATAGGTCTCATGGATAAGCTAC
ATAACAGATCCATTCGTTGTCTTCCCCATCAATAGGCTCGAGGTGATAGAATCGTCCTTTGTAACGATCAAGACTGGTAA
GTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGTGCG
>chr3A_2
-AAAAAATTCATTGTATCGTTGGGTCGGAGCGGAGGTTTGGTCCAGAAAAATTAGAAACAAAACGTCTACTCTACCGCAT
TGAAGTCTATAGCGTTGTATTTGCACGAAAGTATAATTCTTACCATCAGGATACGATCCTTTCTTTCGAACTAAACGTCT
CTACGATGGGTCCAGGTTCTATGTCCAATCCCAAATCAAGGATTTCTCGCTCTTGATTGGAGTCATAAACTAAAAAAACT
ACCTTTTATCCTTTTTCTCAAGGTTATAGAAAACTTT-TTATCTAGTTCTAGCATTTTGAAAAAATGCTTCTTT-TTTAC
ACACAGTTCGATTCACTTGTTGACTCACGATTACGCCTGCTAAAAGTTTCAAACGTCCTCTTTTTTGAAATTGAAAGAGA
GTCCTATAAAAAGGTCTAACTTCCAAACTATGTCTTTTTTCATTCATTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGG
AATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGCATTGTATGGCCCAGAATAGGTCCTATTCTTCTAC
CTTTTCCAGGTAGTCCATGGCTATTCACAGCTACCACCTTAACACCAAAGAAGAGTTCGACCCAATGCTTTATTTCTGTC
TTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCAATAAACGAAGACTTTTTTCTATAAATACTACATA
TTTGATTCCATTATCATTATCATACGATAATACTATATTTTATTATTTTATTATTTTATTTGTATTTCTTTATTGTATTA
TACCTTAATATATATATTCTAGATATATAGAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTACT
TTTATTCGGCTCAATCTTTTTT-AG----AAAA-----------------------------------------------
--------------------------------------------------------------------------------
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--AAAAGATTGAGCCGAGTTTAAATGCAA-TCAATTAGAAGAATAAAGAAGAATTACTACATTTCATAACTGA-TTTTTT
TCTCTTTTTATTTCGTTTATG-TTTTATTTATAC-----CT-----TCTTTATCTTTAGTTTTATCTAGTTAATCAATAG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCATGACTCCATTTGCAAGCT
GCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACGCAGGCTTCTAAAGCCACTCG
ATTAGCTGCTGCACTAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATGCAGAATCGTTCCCAA
AGATTTCGGTCAAAGCTGGCATACGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGCTACCTAG
TCCTGAGTGAAAAAGATACTGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCAT
TTTGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTGCACCAGACATATGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCGGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACATTAGGAACCCC
TAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGCCGCATTCAAGTAATGCCCCTTGATTT
CACTGTTTTCGGCCTGTGATTCATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCGGCGCATAAATGGT------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3B_334
--------------------------------------------------------------------------------
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-------------------------------------------------------TCCTCTTTTTTGAAATTGAAAGAGA
GTCCTATAAAAAGGTCTAACTTCCAAACTATGTCTTTTTTCATTCATTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGG
AATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGCATTGTATGGCCCAGAATAGTTCCTATTCTTCTAC
CTTTTCCAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACCAAAGAAGAGTTCGACCCAATGCTTTATTTCTGTC
TTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCAATAAACGAAGGCTTTTTTCTGTAAATACTGCATA
TTTGATTCCATTATCAT------ATGATAATAC-------TA-TATTTTATTATTTTATTTGTATTTCTTTATTGTATTA
TACCTTAATATATATACTCTAGATATATAGAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTATT
TTTATTCGGCTCAATCTTTTTT-AG---AAAAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--AAAAGATTGAGCCGAGTTTAATTGCAA-TCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTTA-TTTTTT
TCTCTTTTTATTTCGTTTCTT-TTTTATTTATACCTTCTCT-----TCTTTATCTTTAGTTTTATCTACTT-ATCAATAG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCT
GCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACTCG
ATTAGCTGTTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTAAAGCTACCGGTATAACACCTGGCATGGATACCCAG
TCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCAT
TTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCC
TAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTT
CACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAG
TTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTCGACACTCATAACACGCTCTACCATAATTTTTTGCGGA
TAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATAC
CATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTG
AAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTAC
ATAACAGATCCATTGGCTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAA
GTCCATCAGTCCAAACAGTTGTCCATGTACC--------------------------------------------
>chr1A_334
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TCCTCTTTTTTGAAATTGAAAGAGA
GTCCTACAAAAAGGTCTAACTTCCAAACTATGTCTTTTTTCATTCATTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGG
AATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGCATTGTATGGCCCAGAATAGGTCCTATTCTTTTAC
CTTTTCCAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACCAAAGAAGAGTTCGACCCAATGCTTTATTTCTGTC
TTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCAATAAACGAAGACTTTTTTCTGTAAATACTGCGTA
TTTGATTCCATTATCAT------ATGATAATAC-------TA-TATTTTATTATTTTATTTGTATTTCTTTATTGTATTA
TACCTTAATATATATATTCTAGATATATAGAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTATT
TTTATTCGGCTCAATCTTTTTT-AG---AAAAAAAAGATTGAGCCGAGTTTAATTGCAATCAATTAGAAGAATAAAATAT
AGTATTATCATATGATAATGGAATCAAATACGCAGTATTTACAGAAAAAAGTCTTCGTTTATTGGGAAAGAATCAATATA
CTTTTAATGTCGAATCGGGATTCACTAAGACAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGTGTTAAGGTGGTAGCT
GTGAATAGCCATCGACTACCTGGAAAAGGTAAAAGAATAGGACCTATTCTGGGCCATACAATGCATTACAGACGTATGAT
CATTACCCTTCAACCGGGTTATTCTATTCCAATAAACGAAGACTTTTTTCTGTAAATACTGCGTATTTGATTCCATTATC
ATATGATAATACTATATTTTATTATTTTATTTGTATTTCTTTATTGTATTATACCTTAATATATATATTCTAGATATATA
GAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTATTTTTATTCGGCTCAATCTTTTTTAGAAAAA
AAA---GATTGAGCCGAGTTTAATTGC-AATCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTTA-TTTTTT
TCTCTTTTTATTTCGTTTCTT-TTTTATTTATACCTTCTCT-----TCTTTATCTTTAGTTTTATCTACTT-ATCAATAG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCT
GCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACTCG
ATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAA
AAATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAG
TCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCAT
TTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCC
TAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTT
CACCGGTTTCGGCCTATGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAG
TTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACATAGACACTCATAACACGCTCTACCATATTTTTTTGCGGA
TAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATAC
CATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTG
AAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACAGAACCCTCTTCAAATAGGTCTAATGGATAAGCTTC
ATAACAGATCCATTGGCTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAA
GACCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCG
>chr3A_334
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TCCTCTTTTTTGAAATTGAAAGAGA
GTCCTATAAAAAGGTCTAACTTCCAAACTATGTCTTTTTTCATTCATTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGG
AATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGCATTGTATGGCCCAGAATAGGTCCTATTCTTATAC
CTTTTCCAGGTAGTTGATGGCTATTCACAGCTACCACCTTAACACCAAAGAAGAGTTCGACCCAATGCTTTATTTCTGTC
TTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCAATAAACGAAGACTTTTTTCTGTAAATACTGCGTA
TTTGATTCCATTATCAT------ATGATAATAC-------TA-TATTTTATTATTATATTTGTATTTCTTTATTGTATTA
TACCTTAATATATATATTCTAGATATATAGAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTATT
TTTATTCGGCTCAATCTTTTTT-AG---AAAAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AA-AGATTGACCCGAGTTTAATTGCAA-TCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTTA-TTTTTT
TCTTTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3A_376
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------AACTTCCAAACTATGTCTTTTTTCATTCATTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGG
AATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGCATTGTATGGCCCAGAATAGGTCCTATTCTTTTAC
CTTTTCCAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACCAAAGAAGAGTTCGACCCAATGCTTTATTTCTGTC
TTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCAATAAACGAAGACTTTTTTCTGTAAATACTGCGTA
TTTGATTCCATTATCAT------ATGATAATAC-------TA-TATTTTATTATTTTATTTGTATTTCTTTATTGTATTA
TACCTTAATATATATATTCTAGATATATAGAATAGACGAATCTCAATTTGTCAAGTCTCATGATCATATCATGATCTATT
TTTATTCGGCTCAATCTTTTTT-AG---AAAAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AA-AGATTGAGCCGAGTTTAATTGCAA-TCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTTA-TTTTTT
TCTCTTTTTATTTCGTTTCTT-TTTTATTTATACCTTCTCT-----TCTTTATCTTTAGTTTTATCTACTT-ATCAATAG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCT
GCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACTCG
ATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2D_703
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------TGATAATAC-------TA-TATTTTATTATTTTATTTGTATTTCTTTATTGTATTA
TACCTTAATATATATATTCTAGATATATAGAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTATT
TTTATTCGGCTCAATCTTTTTTTTTCT---AAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AA-AGATTGAGCCGAGTTTAATTGCAA-TCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTGA-TTTTTT
TCTCTTTTTATTTCGTTTCTT-TTTTATTTATAC-----CT-----TCTTTATCTTTAGTTTTATCTAGTTAATCAATAG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCT
GCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTAGACAGGCTTCTAAAGCCACTCG
ATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATTGTCCCCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAG
TCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCAT
TTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCC
TAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCTGCAGTCGCATTCAAGTAATGCCCCTTGATTT
CACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAG
TTTACATTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGA
TAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATAC
CATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAAGGTAGAGCACGTAGGGCTTTG
AAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTAC
ATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAA
GTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCG
>chr5D_703
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TGATAATAC-------TA-TATTTTATTATTTTATTTGTATTTCTTTATTGTATTA
TACCTTAATATATATATTCTAGATATATAGAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTATT
TTTATTCGGCTCAATCTTTTTT-AGAAAAAAAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--A---GATTGAGCCGAGTTTAATTGC-A-TCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTGA-TTTTTT
TCTCTTTTTATTTCGTTTCTT-TTTTATTTATAC-----CT-----TCTTTATCTTTAGTTTTATCTAGTTAATCAATAG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCT
GCTCGGATAATTTCATTACCTTCGCGAGCAAGATCATGCCCTTCGTTACGAGCTTGTACACAGG-TTCCAAAGCCACTCG
ATTAGTTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACATAATCGTCCCCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAG
TCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCAT
TTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCAGAGTGGATATGATCTCCCCCAGACATATGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAAATGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGTCGCGGCAATAATGAGCGAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCC
TAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTT
CACCGGTTTCGGCCTGTGATTTATAAATAGCTTTGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAG
TTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGA
TAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATAC
CATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTG
AAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAAGCCTCTTCAAATAGGTCTAATGGATAAGCTAC
ATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTATAACGATAAAGACTGGTAA
GTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTACTTCTTCGGGCG
>chr5D_712
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TATTATTTTATTATTTTATTTGTATTTCTTTATTGTATTA
TACCTTAATATATATATTCTAGATATATAGAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTATT
TTTATTCGGCTCAATCTTTTTT-AGAAAAAAAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AA-AGATTGAGCCGAGTTTAATTGCAA-TCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTGA-TTTTTT
TCTCTTTTTATTTCGTTTCTT-TTTTATTTATAC-----CT-----TCTTTATCTTTAGTTTTATCTAGTTAATCAATAG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCT
GCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACTCG
ATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAG
TCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGTAATAAATCAACAAAACCTAAAGTCAT
TTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCAGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGGCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCC
TAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTT
CACCGGTTTCGGCCTGTGATTTATAAATAGCTTTGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAG
TTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCATGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGA
TAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATAC
CATGAGGCGGGCCTTGGAATTTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGTACATAGGGCTTTG
AAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTAC
ATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAA
GTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCG
>chr1D_723
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TATTTTATTTGTATTTCTTTATTGTATTA
TACCTTAATATATATATTCTAGATATATAGAATAGACGAATCTCGATTTGTCAAGTCTCATGATCATATCATGATCTATT
TTTATTCGGCTCAATCTTTT-TTTTCT---AAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--AA-AGATTGAGCCGAGTTTAATTGCAA-TCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTGA-TTTTTT
-CTCTTTTTATTTCGTTTCTT-TTTTATTTATAC-----CT-----TCTTTATCTTTAGTTTTATCTAGTTAATCAATAG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCT
GCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTATGAGCTTGTACACAGGCTTCTAAAGCCACTCG
ATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAACACAGAATCGTCCGCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAG
TCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCAT
TTCGCGTTCCCCTTCTAACTTACCTACTACTTTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGTATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCC
TAATTCTCTTGCAAATATAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCACATTCAAGTAATGCCCCTTGATTT
CACCGGTTTCGGCCTATGATTTATAAATAGCTTCGGCACAAAAGACAAAATGGTCTCTCCAGCGCATAAATGGTTGTGAG
TTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGA
TAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATGTCTTTCAACTTGGATAC
CATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACTTAGAGCACGTAGGGCTTTG
AAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTAC
ATAACAGATCCATTAGTTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATTAAGACAGGTAA
GTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCG
>chr2D_821
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---------------------------------------------------------------------CATGATCTATT
TTTATTCGGCTCAATCTTTT-TTAG---AAAAA-----------------------------------------------
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--AA-AGATTGAGCCGAGTTTAATTGCAA-TCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTTATTTTTTT
-CTCTTTTTATTTCGTTTCTT-TTTTATTTATAC-----CTTCTCTTCTTTATCTTTAGTTTTATCTACTT-ATCAATAG
TATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCT
GCTCGGATAATTTCATTACCTTCGCGAGTAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACTCG
ATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAG
TCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCAT
TTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCC
TAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCTTTCAAGTAATGCCCCTTGATTT
CACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAG
TTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGA
TAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATAC
CATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTG
AAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTAC
ATAACAGATCCATTGGCTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAA
GTCCATCAGTCCAAACAGTTTTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCG
>chr3B_1143
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----------------------------------------------------------CACAGGCTTCTAAAGCCACTCG
ATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAACACAGAATCGTCCCCAA
AGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAG
TCCTGAGTGAAAAATATATCGTGAGCACGATCTTTTTCAATAAAATCATCACGCAATAAATCAACAAAACCTAAAGTCAT
TTTGTGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATACTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAGCTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCA
TTGTCGCGGCAATAATGAGCC-AAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTAGAATAGGAACCCC
TAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTT
CACCGATTTCGGCCTGTGATTTATAAATAGCTTCAGCACAAAAGACAAAACGGTCTCTCCGGCGCATAAATGGTTGTGAG
TTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAA-ACGCTCTACCATAATTTTTTGCGGA
TAATCCTAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAAGTTATCTCTTTCAACTTGGATAC
CATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACG-----CTTTG
AAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTAC
ATAACAG-------------------------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
S------S-----------------------------------------------S------------------------
----------------------S--S----------------------------------------S-------------
---------------------------------------------------------S----------------------
--------------------S---------S-----SS------------------------------------S-----
-----------S--------------------------------------------------------------------
-----------------------------S--------------------S----S----S-------------------
--------------------------------------------S-----------------------------------
--------S---------------------------S--------------------S-------------------S--
----------------S----------------------------------S----------------S----S-S----
-------------------------------------------------------------------S------------
---------------S----------------------------------------------------------------
-----S-S-------S----------------------------------------------------------------
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-------------S-------S----------------------------------------------S------S--S-
-------------------------------------------------S-S---------------------S------
----S-----------------------------------------------------------S---------------
----------S------------------------------------------S------------------S-------
-----------------------------------------------------SS-------------------------
----------------------------------------------------------------S---------------
-----S-------------------------------------------------S------------------------
------------------------------S-------------------------------------------------
--------S--------------------------SS---------------------------S---------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S--------------S-------------------------S-----------------------
--------------------------------------------------------------------------------
-S-------------------------------------------------------------------------S----
----------S---------------------------------------S---------------S-------------
--------------S-------------S---S--------S-------S------------------------------
-----------------------------------------------------------------------S---
>forward_597
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--------------CGATGGCTATTCACAGCTACCAT-------------------------------------------
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>reverse_2431
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------------------------------GGTCCACCACATAGACACTCA-----------------------------
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---------------------------------------------------------------------------
