>input_sequence_85114
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---------------------ATGC-----------------------------GATTCAGCCGATGCATGCTGTCGCTC
ACTCTTT-CTTGCCGCTTGGTGCCGGATCAGATGCGGTTCTTGATCAGCGTGCTGCGCACCATCATCGGCTACTACTTTT
GCCTTCTCTTCGTTATTCAAGCCCCCGTCATGGGTTACGTGCGGAACTGCCTCACCTTCTTCTGCGTCTTGCTCCTCGTC
GCATTCCTCAACCGCCCCAGTAATGGCGATGACGACGACGCCGACGAAGACGACGACTCCGCCACCGCCGCCTCCTACGT
CTTGGTCGCCTGA-------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G149400
CTAGTCGATTGTATCAGTAGTAACAAATGGATGAAG--TTGATCCTTTGCCAATCGTAGCGAGTCAGACACGAAATCCTG
CATATTGCTATCCTGATTTGTGGTATCAGTTTTTGTTTTTCTCTTTTGTTTATTGTTTTTGTTTTCTGAGGGGATGTAGT
ATCAGGTTTCGGTGTTGGTTCAGTTTTCTGGTAAGTCGAGCAATTACTCTCTTTGTCCGTCCGGAATTAGTCGTCGTGCA
AATAGACGTCCGTCCGGAATTAGTTGTCGTGGAAATGGATGTAATTCCGGACGGAGGTAAATGAGGGTGTGATTGTGACG
CCGTGATGTGCCAGTTGCAGGGCTGTATTG-----GCAGCTCGGTTCACCCGGTTGCTATCGTTTGCCGGTGTGTGCCGC
GTACGTAGCAGATGAAGTTCTGGATAAGCATGTTGCTCACCATCCTCTGCTACATCGGCCCCCGTCAGGACGTCAAATGG
TTTCATCCTTGGCCGATCGTAGTGAT-------TAGTGAGCCAGACACGAAATCTGTGTTACGATCATCTACAAAACCGG
TTTCAAAAAACAAAA---AAGATCATCTCCAAAACCTCGACCCAGCTGGT--------------------------CTCC
TGCCGAAACTCGACTG--------GACGGGTCTAACTTCGCAACCCTGGTCTAAAATTT-CAAGTTGCAACTGGCACAGT
CGGAAATGTCT-------------------AGTCTAATCTAAATATTGTGACACGAGTCAGCGCGCGCGCGGTCGGTCGC
TGGTCGAGGAGTTTATACCCTT-CGTTCCACCGAATGGACAGAAGCAAGGAGCGCTCCGTCAGTCCTTTCCTCGCCCCAC
CCCCGCC------------TCCGCTTCCGGCGACCGCGAGCAGCACCTGCACCGGGGACAGCGGCATCCACCGGA-----
GGAGGAGATGGAGACGGCGCCGGGCTCGCGGTGCCGCCGGTGCCTGGAGATCCTGTGCGCCGTCCTCCTCCCGCCGCTCC
GCGTCTACCTCCGCCACGGCTTCTGCTCC---------------------------------------------------
-ATGTTTGGTTTCCTCCATGCATGC-----------------------------GATTCAGCCGATGCATGCTGTCGCTC
ACTCTTT-CTTGCCGCTTGGTGCCGGATCAGATGCGGTTCTTGATCAGCGTGCTGCGCACCATCATCGGCTACTACTTTT
GCCTTCTCTTCGTTATTCAAGCCCCCGTCATGGGTTACGTGCGGAACTGCCTCACCTTCTTCTGCGTCTTGCTCCTCGTC
GCATTCCTCAACCGCCCCAGTAATGGCGATGACGACGACGCCGACGAAGACGACGACTCCGCCACCGCCGCCTCCTACGT
CTTGGTCGCCTGACCGTGTTTGAAGATTCCATGCCGTGTGGATTGTCAGTTCCACAACGAGATTATTTG-GGCGAGGCCT
TGCCATTGTATCAAATTGAGTTCTTTTTTATTTATTTTTGCTGGTAAAATTGAGTTTATTATTGACCCATTTAAATCTCA
ACCTCCTATGTGCCTCATTGTGTGTTTTTTTACAAAGGGTGAACTTTAGTTTAATAAAATGAAGCGTCAAAGTGAGCGCC
TTTGCATAGTTAGGGCATCTCCCAACGTTGACCCGCAAATTTGCTCTTGCATCCGTCTACAGACACGGACGCAGAAGCTG
ACAATCCAATGTTGCCCGCATACATTTCAAACACAATTTCAATTAACTGGACGAAATCCATGCAAAAAAAAAAACAGCGG
ATTTTCATATAAATCGGAGCACATTCAATACAATTCAACCATTTTTCATTCAAAATAGCGGTCGGACCCTAAACCTATAC
TACAACGGCGGCCATCGCCCACTTCCTTTGTATTTCGTATCGGCGACCACGTTCTCCATCTGTTGTCTTCATGCGAGGCG
GTAGGGTTCAAAACCCGTGAAGTGAATATGCGATCTCCAGCAAAGAAGAGTAGAACATGGGAGACAAACCGGCCGACTTG
GGACACAATGCACTGCCGCCTCACATGCCCTATTCATCCTCGGAGGAGTCCCCGAGCTGTCCGTCGCCGGCGCCGGTGGA
CGTGAGGTCGATGATGGACGTAGATGTAATGTCACTGTCCATCTGCCACATGCGTCCCCGAAAGTTGGATGACGACACGT
AGGACGTGTAGCTGGCAGCGTTGGAGTCCATGACCACCCCTGCGCTGCCAGCGCTTGTGCGTCCATGTCCGGTTGTGCCG
GCTCTGCCTTCCGAGCGACGCCTCACTAGTAGAAAACATGGCTTTGGTCACAGCGCAATATACACATTAGTTCCGGTTGC
ATTACGAACCGGGACTAATGTGAGCATTAGTCCCGGTTCAAGCATCTAAAAGCA
>chr7D_4
---GTCGATTATATCGGTAGTAACAAATGGATTGAGTTTTGATCCTTTGCCAATCGTAGCAAGTCAGACACGAAATCCTG
CATATTGCTATCCTGGTGTGTGGTATCATTTTTTGTTCTT--------------------------TGAGGGGATGTAGT
ATCAGATCTCGGTGTTGGTTCAGTTCTCTGGTAAGTCAAGCACGTACTCCCTCCT-------------------------
--------TCCGTCCGGAATTAGTTGTCGTGCAGATGGATGTAATTCCGGACGGAGGTAAATCAGGGTGTGATTGTGATG
CCGTGGTGTGCCAGTTGCAGGG-------------------------------TTGCTCATTTGTAGCTCAAGTTCAAGG
GGCATCATGCTTTCTCGCAAGCTCCCGTGGAACCTGG-------------------------------------------
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----------CGACGG--------GACGGGTCTAACTTTGCAACCCTGGTCTAAAATCTGCAAGTTGCAACTGGCACAGC
GGCACGAGTATGGAAATATGTACCCGGAAAAGTCTAGTCCAAATATCATGACACGAGTCAGCGCACGCGCGGTCGGTCGC
TGGTGGAGGAGTTTATACCCTTCCGTTCCACCGAATGGACAGAAGCAAGGAGTGCTCCATCAGTCCTTTCCTCGTCCCAC
CCCCGCTTCCGCTTCCGCTTCCGCTTCCGGCGACCGCGTG------CTGCACCGGGGACAGCGGCACCCACCGGACCGGA
GGAGGAGATGGAGACGGCGCCGGGTTCGCGCTGCCGCCGGTGCCTGGAGACCCTGTGCGCCGTCCTCCTCCCGCCGCTCG
GCGTCTACCTCCGCCACGGCTTCTGCTCCGTAAGTACACAAGATACACTCACGCTCACGCTCGTTGGCGAAATCCCCGTG
CATGTTTCGTTTCCTCCATGCGTGCATCT-------------CTTTCGCTGGCTGATTCACCCGATGCATGCTGCCGCTC
ACTCTTT-CTTGCCGCTTGGTGCCGGAGCAGATGCGGTTCTTGATCAGCGTGCTGCGCACCATCATCGGCTACTACTTTT
GCCTTCTCTTCGTTATTCAAGCCCCCGTCATGGGTTACGTGCGGAACTGCCTCACCTTCTCCTGTGTCTTGCTCCTCGTC
GCATTCCTCAACTGCCCCAGTAATGGCGCTAACGACGACGT---------CGACGACTCCGCCACCGCCGCCTCCTACGT
CCTGGTCGCCTGACCGTGTTTGAAGATTCCATGCCGTGTGGATTGTCAGGCCCACAACGAGATTATTTG-GGCGAGGTCT
TGTCACTGTACCAAA---------------------------------ATTGAGTT------------------------
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>chr7B_268
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-----------------------------TGGAAATTGATGTAATTTCGGACGGAGATAAATCAGGATGTGATTGTGATG
CCGTGATGTGCCAGTTGCAGGGCTGTATTGTATTTGCAGCTCGGCTCACCCGGTTGCTCATTTGTAGCTCAAGTTCAAGT
GGCCTTTTGTCCTCGACGTCGGCAT---------------------------------------------CGTCAAATGG
TTTCATCCTTGGCCGATCGTAGTGACTAGTGACTAGTGAGCCATACACGAAATCTGTGTTACGATCATCCACAAAACCGG
TTTCAAAAAAGAAAAGAAAAAATCATCTACAAAACCTCGACCCGGTTGGTCTCTAGCATAGGAGAAAAGAGATCCGCTCC
TGCCGAAACTCGACTCGACGGGTCGACGGGTCAAACTTGACAACCCTGGCCCAAAATATGCAAGTTGTAACTGGCACAGC
CGGAAAAGTCT-------------------AGTCTAATAAATACTGTATGTA----------------------------
-------------TATATCCTTCCGTTCCACCAAATGATCAGAAGCAAGGAG----------------------------
---------------------CGCTTCCGGCGACCGCGAGCTGCACCTGCACCGGAGACAGCAGCATCCACCGGA--GGA
GGAGGAGATGGAGACGGGGCCGGGTTCGCGCTGCCGCCGGTGCCTGGAGATCCTGTGCGCCGTCCTCCTCCCGCCGCTCC
GCGTCTACCTCCGCCACGGCTTCTGCTCCGTAAGCACCCGCCGACGAGCGAACACCC-----------------------
CATGTTTCCTTTCCTCCATGCATATGCATGCATACCTTTCGACTTTCACCAGCTGATTCACCCG----ATGCTGCCGCTC
ACTCTTTTCTTGCCGCTTGGTGCCGGAGCAGATGCGGTTCTTGATCAGCGTGCTGCGCACCATCATCGGCTACTACTTTT
GCCTTCTCTTCGTTATTCAAGCCCCCGTCACGGGTTACGTGCGGAACTACCTCGCCGTCTTCTATGTCTTGCTCCTCGTC
GCA---CTCAACCGCCCCAGTAATGGCGACAACGACGACGTCGACGAAGATGACGACTCCGCCACCGCCGCCTCCTACGT
CTTCGTCGCCTGACCGTGTTTGATGATTCCATGCCGTGTGGACTGTCAGTCCCCCAACAAGATTATTTGTGGCGAGGTCT
TGTCACTGTACCAAA---------------------------------ATTGAGTT------------------------
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>SNPs
SSS-------S----S----------------SS--------------------------S-------------------
---------------S-S----------S--------S--SSSSSSSSSSSSSSSSSSSSSSSSSS--------------
-----S-S-----------------S-----------S----SS-----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS------------------------------------------------------S---------------S-
--------------------------------------------S-------------SSSS-S-SS-SSSSSS-SSS-S
-SS-S--SSSSS-SS--S--S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
-------------------------S-----------------S-------------------------S----------
----------S---------S-------S--------------S-S----------------------------------
--------------------------------------S------------------S---------------------S
------S--------------------------------S-------S----------------S---------------
----S-----------------------------------------------S-----S---------------S-----
------S----------------------------------S--------------------------------------
------------------------S-----S-------------------------------------------------
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-------S----------------------------------------------------S-------------S-----
---------------------------S----------------------------------------------------
----------------------------------------------------------------S---------------
------------------------------S---------S---------------------------------------
--------------------------------------------------S--------------------------S--
--S--S----S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_451
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-------------------------------GTTGCTCACCATCCTCTGCT-----------------------------
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>reverse_1702
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---------------------CCAACGTTGACCCGCAAATT---------------------------------------
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