>input_sequence_85087
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------ATG------------GCCTGCGCCTTCTTCTTCGACGC------------CGAGCCGGTCGGCGAGCCCGGCGT
GCACGCCCTGGACGCGTGCGCGCTCTGCACCAAGCCGCTGGCGCGGGACAGCGACATCTTCATGTACAGAGGAGACACGC
CCTTTTGCAGCGACGAGTGCCGCCAGGAGCAGATGCAGCTCGACGCCGCCTGCGCCAGGCAGGCGGCC---------GCC
CGGAGGCAGAAGCAGTTTTCTTCGGGAACGGAG-TCCGGGCGCGCACGCCGGGAGTCATGGGAGGTTTCCGTCGCGAGCT
AA------------------------------------------------------------------------------
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>chr2D_1_TraesCS2D01G453200
CTGGTGCTGGCGTATGACAAGTTCGTGCGTTTGATTGGGTGTAGAGGTGTAGACAAGATCCGCACATGTGCGCCAACCCC
TACACTGTTCACAAGCTGCTGCCTGGCGGGCATGCACCGCAACCCCCGAAGCTCGCCCATGGACCACGACACCACGCCAT
GGAGAAAAGGGCTGCACCTCGATTTCTTTTCTGAAA--------AAAGGATCGC--------------------A-----
------GTGCGCACTGTTGGCCTATAATTAGCGTGCCTAACCACGTGGGCCACCTGGCCCGTATGTTGGCGAAAAGGCTG
GCGCGCTAATTATGGGCCCTAATACGGTCCGCATTAGGTTATGCCAGTGGCCGCCTTAATGATGTAGATTTGATGCCCAC
GATTCCGACTAGAGGGACAAGAAATAATTCTTTCGCGCTTATATTATTGGAGCGAATATTTACTCAGATCTTGCGCCGAG
AGAAAAGTAGAGCGAGCTTTTGTTCAGGCCAGGGG------TACTTCGGTCTTCAGTACTTGTA-----TTTCCATTCCA
ATCAGTC-------GATGGTATTGGTGTCGTACTCCAAGACTACGGGCGCTAGCACACAGGTTAGGGG-TACATGGACCG
CGACGTCTCTGGAGCGACCTC-TGTAGGTTGCTATCG---------------------GTCGCCCGGACATAACATGGTT
CCCGTCGTTTTCGCCGCCGTGGAGCCACGTCTGCCATCAGGCGGGGCGGCGGGCCACCCACCGCATGGCGCCGTGGGTCC
GTG-TCGGAGCCCGCGAATAA-----------------------------------------------------------
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----------------------------------AGAAACCGAACCGCTCCATCGTCCATGGTTAGCCTCGTCCGGGCGG
CGCATGGTATT-GCCTGACCGGCTGACCCTGTGGGCTCGTCGCGCCCGCGCCGAGCCTGTTTTCTCCT------------
CGCGGGTAGGGGTCGTGTCCGCGTCCGCGCAA----------------------CCATATATACCCAG---ACCCCAGTT
TGGTTCAG-CACACC-----------------------------------------------------------------
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-------------------------------------------------------------------------AAATACT
C--TCAACCTTTCACTCCCGTCGCACCA------AAGGCATCAACGAACTGCCAAG---TTAGCTACA----CGCAGGAA
CGCACGATG------------GCCTGCGCCTTCTTCTTCGACGC------------CGAGCCGGTCGGCGAGCCCGGCGT
GCACGCCCTGGACGCGTGCGCGCTCTGCACCAAGCCGCTGGCGCGGGACAGCGACATCTTCATGTACAGAGGAGACACGC
CCTTTTGCAGCGACGAGTGCCGCCAGGAGCAGATGCAGCTCGACGCCGCCTGCGCCAGGCAGGCGGCC---------GCC
CGGAGGCAGAAGCAGTTTTCTTCGGGAACGGAG-TCCGGGCGCGCACGCCGGGAGTCATGGGAGGTTTCCGTCGCGAGCT
AACGGGTGTCAGTGCCAAGCTGCCTACG-----------------------CACTTGAGTCAACAAGATCTGCGTACACG
GA---GACGCCGTCGCCCGTGACCAACTGATAA------GCGCGGGATCGACGAGACTCGCCCTGGTTGAAG----AAGC
AAG----AGGCGGGTCGTCG----GAGTTGCTCACGGCAGGCCGGCA-TGCACGGGCCGCCGGTCAAGTGATTTGGGCAT
AAACGCAGCGG-AAA-GGGGCTGGACTGGATCTGAGCAAGTCAATC--AAACAGGATTCTCCACGGCC------TTAGCC
GGCC-ATGC-----GTGCCCCTCGCC---TCTCCT----------TTTTTTTCCTGCGTTA--------ATGTCAGTTCT
GTATGAGAGCGAATTTGC-------AACGGCACTTGCACTGGG---------------------------------TTCG
TGCAATCCCGTTTCTGTTCATGATTCAGCGTGCGTGCTAATGGGATTTTACAAGCTAAACCATTGGATGTTTACCGCACC
ATTTAAAACTGAATTTTGTTAC-AGATCTGCGGTGTCAGAAACTGAATCCCCATACTAATCTGATGGCTAAACTCGGTCG
TTTTCTTTTTGCGGGCACTAAACTCGGTAAAATTAAAATATTCTCGATCTACTGAACATCAACAAGACAACTCTACAATA
CTTATCCTAAAAAAACTCCACTGGACTAATTTTGGCCTTGAGTTAGGAATTTAAATTCACTGCAATGCTAGAAGTACGTT
GTTTGTGTACTATGTGTGGTGGGGCTCACGCTCAGTCCTGGCCATGGGAAGCCCGGCCCGGCCCGAAAAGGCCCAACCCG
GCCTGGCCCTAGATTTTGAGCCCGATGGCTGGGCCCGGGCCCGTCGTTTTTGCGTTTTTCGGAAGAGGCCCGGCCCGAGG
CCCGGTGGGCTTTTATGCGTTCGGGTTGGCCTTGGGCCCAAAAACCAGGCCCGATGGCCGGGCCGGGCCTGGGCCTAGGT
TTTTTGCCTCGGGCTTGGCTTGGCTAGGCCCGGCCCGAAGCCCGGCCCGGCCCAAGGTTTGGCCAGGTGAGTCACGCTGT
GTTCG
>chr2D_1
CTGGTGCCGGCGTGTGACAGGTTCGTGCGTCTGATTGGGTGTAGAGGTGTAGACAAGATCTGCACATGTGCGGCCACCTC
CACACTGTTCACAAGCTGCTGCCTGGCGGGCATGCACCACACCCCCCAAAGCTCGCCCATGGACCACGGCTCCACGCCAT
GGAGAAAAGAACGGCACCTTGATTTCTTCTACTTT-CTTTTCTCAAA-GTGGGCACTGTTTTTTTTAGAACCAAA-----
------GTGGGCACTGTTGGTCTATAATTAGGGTGCCTAACCACGTGGGCCACCTGGCCCGTATGTTGGCGAAAAGGCTG
GCACGCTAATTATGGGCCCTAATACGGTCCGCATTAGTTTATGCCGGTGGCCGCC-TAATGATGTAGATTTGATGCCCAC
GATTCCGACTAGACAGACAAGAAATAATTCTTTCGCGCTTATATTATTGGGGCGAATATTTAGTCCGATCTTTCGCGGAG
AGAAAAGTAGAGCGAGTGTTTGTTCAGGCCAGGGG------TA-------CGTCAGTACTTGTA-----TTTCCATTCCA
ATCAGTC-------GATGGTATTGGTGTCGTACTCCAAGACTGCGGGCGCTAGCCCACAGGTTTGGGGGTACATGGAGGG
CGAC---------GCGACCTC-TGTACGTTGCTATCGGTGGCCCGGGACCC-GTCCACGTCGCCCGCACATAACATGGTT
CCTGTCGTTTTCGCCGCCGTGGAGCCACGTCTGCTATCAGGCGGGGCGGCGGGCCACCACCCGTATGGCGCCGTGGGTCC
GTG-TCGGAGCCCGCGAATAA-----------------------------------------------------------
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----------------------------------TGAAACAGAAGCGCTCCATCGTCCATGGTTAGCCTCGTCCGGGCGG
CGCATGGTATT-GC--------CTGACCCTGTGGGCTCGTCCCGCCCGCGCCGGACTTCTTCTCTCGT------------
CGCGGGTCCGTGCCCGTCCCTGC-----GCAG----------------------GCATATATACCCAG---ACTCCAGTT
TGGTTCAG-CACAGC-----------------------------------------------------------------
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-------------------------------------------------------------------------AAACACT
CAATCAATCTCCCACTCCCGGCGCACCA------AAAGCAAGGACG--------------TA-----------GCACGAA
AACACGATG------------GCCTGCGCCTTCTTCTTCGACGC------------CGAGCC------------CGGCGT
GCACGCGCTGGACGCGTGCGCGCTCTGCACCAAGCCGCTGGCGCGGGACAGCGACATCTTCATGTACAGAGTGGACACGC
CCTTCTGCAGCGACGAGTGCCGCCACGAGCAGATGCAGCTCGACGCCGCCTGCGCCAGGCAGGCCGCC---------GCC
CGGAGGCAGAAGCAGTTCTCGTCGGGAACGGGGGTCCGGACGTGCGCACC---------GGGAGGCGTCCGTCGCGAGCT
GACCGGCGAGAGCGGCATGCTCCGTACG-----------------------TGCTTGAGCCAACAAGATCGGCGTGCACG
AA---GACGCCATCGCCCGTGGCCAACTGATCA------GCGCGGGGTCGAGAAGACTCGCCTTGGTTGAAG----AATC
AAG----ACGCGTGTCACTG----GAGTTGTTCACGGCAGGC-GGCGCTGCACGGGCCACCGGTCAAGTGATTTGGGTAT
AAACGCAGCGG-AAA-GGAGCTGGACTGGATCTGAAGAAGTCAATC--AAACAGGATTCTCCACGGCA------TTAGGC
GGCC-ATGT-----GTGCCCCTCAGC---TCTCCT----------TTGTTT--CGGCATTG--------ATGTCAGTTCT
GTATGAGAGCGAATTTGC-------AGTGGCACTTTCACTGTCAATCGAATGAAATAAG----------ACATGTCTTTG
TGCAATCTTGTTTCTGTTCATCATTA-----GCGTGCCAATGAGATTGAACAAGCTAAGCCGTTGGATGTTTACCACACG
ATTTTAAACTGAATTTTGTTCTAAGAACTGGGGTGTCAAAAACTGAATCCCCGTACTAATCTGATGGCTAAACTCG----
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>chr2B_1
CTGGTGCCGGCGTATGACAGGTTCGTGCGTTTGATTGGGTGTAGAGGTGTAGACAAGATCTGCACATGTGCGCCAACCTC
TACACTGTTCGTCAGCTGCTGCCTGGCGGGCATGCACCACAACCCCCAAAGCTCGCCCATGGACCACGGCACCACACCAT
GGAGAAAAGAACGGCACCTTGATTTCTTTTACTTT-CTTTTCTCAAAAGTGGGCACTGTTTTTTTTAGAACCAAA-----
------GTGGGCACTGTTGATCTATAATTAGCGTGCCTAACCACGTGGGCCACCTGGCCCGTATGTTGGCGAAAAGGCTG
GCGCGCTAATTATGGGCCCTAATACGGTCCACATTAGTTTATGCCAGTAGACACC-TAATGATGTAGATTTGATGCCCAC
GATTCCGACTAGACAGACTACAAATAATTCTTTCGCACTTATGTTATTGGAGAGAATATATACTCAGATCTTACGCCGAG
AGAAAAGTAGAGCGAGTGTTTGTTCAGGCCAGGGG------TA-------CTTCAGTACTTGTA-----TTTCCATTCCA
ATCAGTC-------GATGGTATTGGTGTCCTACTCCAAGACTACGGGCGCTAGCACACAGGTTTGGGGGTACGTGGAGGG
CGACGTCTCTGGAGCGACCTC-TGTACGTTGCTATCGGTGGCC-GGGACCC-GTCCACGTCGCCCGGACATAACATGGTT
CCCGTCGTTTTCGCCGCCGTGGAGCCACGTCTGCCATCCGGCGGGGCGGCGGGCCACCCACCGCATGGCGCCGTAGGTCC
GTG-TCGGAGCCCAGGAATAA-----------------------------------------------------------
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----------------------------------AGAAGCCGAGCCGCTCCATGGTCCATGGTTAGCCTCGTCCTGGCGG
CGCATGGTATTTGC--------CTGAACCTGTGGGCTCGTCTCGCCCGCGCCAGACCTCTTCTCTCCT------------
G---------------------------GCAA----------------------CCATATATACCCAGGCGACCCTGGCT
TGGTTCAG-CACAGG-----------------------------------------------------------------
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-------------------------------------------------------------------------AAACACT
CAACTTGCCTCCCACTCCCGGCGCACCA------AAAGCAACAACG--------------TAGCTACAAGGCCACACGAA
AACACGATG------------GCCTGCGCCTTCTTCTTCGACACCGAGCCGGTCGGCGAGCC------------CGGCGT
GCACGCCCTGGACGCGTGCGCGCTCTGCACCAAGCCGCTCGCGCGGGACAGCGACATCTTCATGTACAGAGGGGACACGC
CCTTCTGCAGCGACGAGTGCCGCCACGAGCAGATGCGGCTCGACGTCGCCTGCGCCAGGCAGGCCGCC---------GCC
CGGAGGCAGAAGCAGTTTTCGCCGGGAACGGGG-TCCGGGCGTGCACGCCGGGAGTCCTGGGAAGTGTCCGTCGCGAGCT
AACCGGCGACAGCGGCAGGCTGGGTGTG-----------------------CACCTGAGCAAACAAGATCTGCGT-----
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>chr2B_1
CTGATGCCGGTGTATGACTGGTTCGTGCGTTTGATTCGGTGTGTA-GTATCGACAAGATCTGCACATGTGCACCCACCTC
AACACTGTTCACAAGCTGCTGCCTGGCGGGCATGCACCACAACCCCCAAAGCTCGCCCATGGACCACGGCATCGTGCCAT
GGAGAAAAGAGCTGCACCTCGATTTCTTTTATTTT-ATTTTCTCGAAAGATCGC--------------------ATATTG
TAACGGGTGCGCACTGTTGGCCTATAATGT--GTGCCTAACCACGTGGGCCACCTGGCCCGTATGTTGGCGAAAAGGCTG
GCGTGCTAATTATGGGCCCTAATACGGTCCGCATTAGTTTATGCCAGTGGCCGCC-TAGTGA-GTAGATTTGATGCCCGC
GATTCCGACTAGAGGGGCAAGAAATAATTCTTTCGCGCTTATATTATTGGAGCGAATATTTACTCAGATCTTTCGCCGAG
AGAAAAGTAGAGCGAGTGTTTGTTCAGGCCAGGGG------TA-------CTTCAGTACTTGTACAGTATTTCCTTTCCA
AGCAGTA-------GATGG-------------CTCCAAGACTACGGGCGCTAGCACACAGGTTTGGGGGTACATGGAGGG
CGACGTCTCTGGAGCGACCCTGTCCACGTTGCTATCGGTGGCC-GGGAC-------------------------------
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>chr2A_1
CTGGTGCCGGTGCATGACAGGTTCGTGCGTTTGATTGGGTGTAGAGGTGTAGACAAGATCTGCACATGTGCGCCAACCCC
TACACTGTTCATCAGCTGCTGCCTGGCGGGCATGCACCACGGCCCCCGAAGCTCGCCCATGGACCACGGCACCACGCCAT
GGAGAAAAGAACGGCACATCGATTTTATTTTCTTTTATTTTCTCAAAAGATCGC--------------------ATATTG
TAACGGGTGCGCACTGTTGGTCTATAATTAGCGTGCCTAACCACGTGGGCCACCTGGCCCGTATGTTGGCGAAAAGGCTG
GCGCGCTAATTATGGGCCCTAATACGGTCCGCATTAGTTTACGTCAGTGGCCGCC-TGATGATGTAGATTTGATGCCCAC
GATTCCGACTAGACGGACAAGAAATAATTCGTTCGCGCTTATGTTATTGGTGCGAATATTTACTCAGATCTTTTGCC-AG
AGAAAAGTAGAGCAATCATTTGTTTGTT-CAGGGCAACTACTA-------CTTCAGTATTTGTA-----TTTCCAATCCA
ATCAGTGATCAGTGGATGGTATTGGTGTCGTACTCCAAGACTATGGGCGCTGGCACACAGGTTTGGGG-TACATGGAGGG
CGACGTCGCTGGACCGACCTC-TGTACGTTGCTATCGCTGGCC-GCGACCCTGTCCACGTCGCCCGGACATAACATGGTT
CCCGTCGTTTTCGCCGCCGTGGAGCCACGTCTGCCATCCGGCGGGGCGGCGGGCCACCCACCGTATGGCGCCGTGGGTCC
GTG-TCGGAGCCCGGGAATAA-----------------------------------------------------------
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----------------------------------AGAAACCGAGCCGCTCCATCGTCCATGGTAT---------------
---------TT-GCCTGACCCTTTG----GGCTCG-TCGTCTCTCCCGCACCAGACCTCTTCTCTCCT------------
G---------------------------GCATTCGCAAGTCGCAACCATTGAACCATATAATACCCAGACA--CCTAGTT
TGGTTCAG-CACAGC-----------------------------------------------------------------
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-------------------------------------------------------------------------AAACAC-
---TCGACCTCCCACTCCCGGCGCGTAGCACCGCA---------CGCACTGCGAAGTTATTAGCTACA----CACACGGA
CACACGATG------------GCCTGCGCCTTCTTCTTCGACGCCGAGCCGGTCGGCGAGCC------------CGGCGT
GCACGCCCTGGACGCGTGCGCGCTCTGCACCAAGCCGCTAGCAAGGGACAGCGACATCTTCATGTACAAGGGGGACACGC
CCTTCTGCAGCGACGACTGCCGACACGAGCAGATGCAGCTCGACGCCGCCTGCGCCAGGCAGGCGGCCAGGGCGTGCA--
-------------------CGCCGGGAACGGGG-TCAGGGCGTGCACGCCGGGAGTCATGGGAGGTGCCCGTCGCGAGCT
AACCGGTGACAGGGCGAAGCTGCCTACG-----------------------CACTTGAGCCAACAAGATCTGCGTGCACG
AA---GCCGCCGCTGCCCGTGTCCAACTGATCA------GCGCGGGATCGAAGAGACTCTCCTTTGTTGAAG----AAGC
TAACCGCGGCCGGGTCATCG----GAGTTGCTCACGGCAGGCCGGCGCTCCACGGGCCGGCGGTCAAATGATTT-GGCAT
AAACGCAGCGG-AAAAAGAGCTGGAGTGGATCTGAAGAAGCCATTC--AATCAAGATTC---------------------
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>chr2A_420
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----------------------------------------------------------TTTACTCGGATCTTTCGGCAAA
AGGAAATCAGAGCGAGCATTTGTTTGTT-CAGGGG------TA-------CTTCAATACTTGTA-----TTTCGTTCCCA
ATCGGCC-------CATGGTATTGGTGTCCTACTCCAAGACTACGGGCGCTAGCACACAGGTTTGGGG-TGCATGAAGGG
CGACGTCTCTGGAACTACCTC-TCTACGTTGCTATCGGTGGCC-GCGACCA-GTCCACGTCGCCCGGACATA-CATGCTT
CCCGTCGTTTTCGC--------------------------------CGCCGGGCCACCCACCGCATGGCGCCATGGGTCC
GTGGTCGGAG--CACGAATAGAGAAACCCAGGGGCGAAATTGGGACTAAGGCAACTGGGGCTATAGCCCCAGGCGTGGGC
CAACTAGTGCCATTATATCCAGTAGAAAAATTTCAGATTTTCATATTTATAGAGGCCCAGCCCCAGACGTGAATACCCAG
CCCAAGGCCTCAGCGGCAGCCCAACTAACTAGCTCAGCAGGAAGCCACGCCCACGGCCTCATTGGTCGGTTGTGATTCCA
AAGGCATCGATCGATCGGCCAGAAATATTACATTCATTGTCGATCAAAAGATCCCTTGTTGACTCGGTGCCTCGTTTCAT
CCGCCGCCCCAGCCCCTCGACGGCTCGACAGACTGAACGATCCGGATCTGTGCTTGGCCTTGTGGCCGCATCACAGTCGC
AGCAAGCCCACTCGGTGCTCTGGCCATCTCCAATTCACTTGTTCTGCTCCGCCTCCACAACTGGCTATAGAGGTATTTAA
AGTTGTCGTATCATCTACTTCCTCCGTTCTAAAATAGATGACCCAACTTTGTACTAAGTTGGATCATCTATTTTAAAACG
TAGGAAGTATTTTTCCTATGGATGATTTGATCTAGCTTTTTAAATCTAGATGTTAAATTGTACTATTACTTTAGTCAATT
GTATTTTAGTTACTTGTTAAAAGAAAAAATGATAGAAATCCAAGATAAAGAGGAGACACACACTCGGACGCACGCACACA
CGATTATATTTCTTTTGAAGCAAGTTCCCACCAGCCTACATCCAACAATACCAGAATCAGAAGGAGCCGGAGCTAGTAAT
GCAAATAAGTAAAACGTGTGTGGAGCTTAATCCAGATGACATTAATCTTGACCCCGGTCTCCATAAACCTAATGAGGAAA
CGCAAGGGGCTATTACCTATTGCACTTCATGATAAATGGTATATTAAGTTTTCCCTTTTTTTGGCACTATTCGTATGAAC
AATTGACTTGGTCTATGTACATTGTCTTGATTTTAAATACACGATTTTGTGTTTGTAACTCCGATCCTTCTAATATTGCT
AGTGAAGAAACGATGGCCTCAAATTAAGCAACTCTTCATTAAATTTTCCCTCGTGGTAAAATGAATTTATATTTCATCTT
TAATGTGAATTTTTGACATACTTCTAACACACGCCGGTATGCTTGGTATTTGACGTTATTTTTAGTCACTTAGTTTTAGC
CCTAGGCTTTGAGAAATCCTAGTTCCGCCTCTGGAGAAACCGAACCGCTCCCTCGTCCTTGGTTAGACTCGTCCGGACGG
CCCATGGTATT-GCGTGGCCCTGTG----TGCTCGCTCGCCTTTCCCCCAGCGGACCAGTTTCGTCCT------------
C---------------------------GCCCGTC-------------------CCATATATACCCAGACG-CCCTAGTT
TGGTTCAG-CACAGCTAGGGGTGGAAACGGATCGGATGCGGATCGGATAGTGCTCTTGCCACTTCCATTTTCATATTTTC
AAAACGAATACGAATCCGAATACGGATGTTATCGGATACGGATGCGGCTCGGATATTATTCGAATACGGATACGTATCGG
ATATTTTCTTGATTCAGAACGGATACGAATAATATCAACATATTGCTTAAGTAAATCAGTCGATAGCTATGTGACCTGAA
ATAATCAACTTGTGACATACAATAAGTCAATGATAAATAGGTTTATGAATAAATACTATTGTAATGCATAATAATTTATA
AGTTTAATCATATAAAGAGTAAAATTTGACCACTTATTTGGCTTTTATGTTGGATAATTGGAATATTGAGTCTAGAAATT
TGAAAATTACCTCCCATGATCTTATTCGGATACGGATATATCCAGTTCCATATTCATATTTGTCTCAAAATCTCCTATCA
TATTTTATTTTTTATTTGTTTAATAAATTCGGATACGAATAATTTCTATTTCCATTTTGGTTCGGACGCGGATGTTTCGG
ATGCGAATAGGCATTTTTTCGAATACGAATATCAGATATTTATCCGCTACCAATTTCCATCCCTAAGCACAGCAAACACT
CGATCAACCCCCCACTCCCGGCGTACCA------AAAGCAACGACG--------------T--CTACAAGGCCACACGAA
CACCAGATG------------GCCTGCGCCTTCTTCTTCGACGCCGAGCCGGTCGGCGAGCC------------CGGCGT
GCACGCGCTGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCACGGGACTGCGACATCTTCATGTACAGAGGGGACACGC
CCTTCTGCAGCGAGGAGTGCCGCCACGAGCAGATGCACCTCGACGCCGGCTGCGCCAGGCAGGCGGCCAGGGCGGCCGCC
CGGAGGCAGAAGCAGTTCTCTTCGGGAACGGAG-TCCGGGCGTGCGCGCCGGGAGTCCTGGGAGGTGTCCGTCGCGAGCT
AACCGGC-----------------------------------------------------AAACAAGATCTGCGTGCACG
AA---GACGGCGTCGCCCGTGGCCAACAGATCA------GCGCGGGATCGAGGAGACTCTCCTTGGTTGAAGGAGGAAGC
AAG----ACGCGGGTCATCG----GGGTTGCTCACGGCAGGCCGGTGCTGCATGGGCATCAATGTG--------------
-----CAGTGGAAAA-GGAGCTGAACTGGATCTGAAG---TCAATC--AAACATGATACTCCACGGCC------ATAGCC
GGCC-AGGCCATGTGTGCCCCTCGGG---CCTCGGCTCTCCTTTCTTT-----CAGCGTTA--------ATGTCAGTTCT
GTATGAGAGCGAATTTGC-------AA-----------------------------------------------------
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>chr2B_632
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-----------------------------------------------------------------------AACATGGTT
CACGTCGTTTTCGCCGCCGTGGAGCCACGTCTGCCATCG--------GGCGGGCCACCCACCGCATGGCGCCGTGGGTCC
GTG-TCGGAGCCCGGGAATAA-----------------------------------------------------------
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----------------------------------AGAAACCGAGCCGCTCCATGGTCCATGGTTAGCCTCGTCCGGGCGG
CGCATGGTATTTGC--------CTGACCCTGTGGGCTCGTCTCGCCCGCGGCGAGCCTGTTTTATTGCTTCTTCAACCAA
G---------------------------GCAA----------------------CCATATATACCCAG---ACCCCAGTT
TGGTTCAT-CACAGC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAACAC-
---TCATCCTCCCACTCCCGGCGCACCA------AAGACAACGACTCACTGCTAAG---TTAGCTACA----CACACGAG
CACAGGATG------------GCCTGCGCCTTCTTCTTCGACGCTGAGCCGGTCGGCGAGCT------------CGGCGT
GCACGCGCTGGACGCGTGCGCGCTCTGCACCAAGCCGCTGGCGCAGGACAGCGACATCTTCATGTACAGAGGGGACACGC
CCTTCTGCAGCGACGAGTGCCGCCATGAACAAATGCAGCTGGACGCCGCCTGCGCCAGGCAGGCAGCCAGGGCGGCCGCC
CGGAGGCAGAAGCAGTTCTCTTCAGGAACGGAG-GCCGGGCGTGCACGGCGGGAGTCATGGGAGGTGTCCGTCGCGAGCT
AACCGGTGACAGGGCCAAGCTGCCTACG-----------------------CACTTGAGCCAACAAGATCTGCGTGCACG
AC---GACGCCGTCGCCCGTGGCTAACTGATCA------CCGCGGGATCGAAGAGATTCTCCTTGGTTGAAG----AATC
AAG----ACGCGGCTCATCGGCAGGCGTTGCTCACGGCAGGCCGGCGCTGCACGGGCCGCCCGTCAAGTGATTTGGGCAT
AAACTCAGCGGCAAT-GGAGCTGGACTGAATCTGAAGAAGACAATC--AAACTAGATTCTCCGCGGCC------TTAGCC
GGCC-ATGT-----GTGCCCCTCGGC---TCTCCT----------TTT-----CTGCGTTA--------ACGTCAGTTCT
GTATGAGAGCGAATTTGC-------AGTGCCACTTTCAC-----------------------------------------
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>chr2D_687
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----------------------------------------------CGCCGGGCCACCCACCGCATGGCGCCGTGG-TCC
GTG-TCGGGG--CGCGAATAA-----------------------------------------------------------
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----------------------------------AGAAACCGAACCGCTCCCTCGTCCTTGGTTAGGCTCGTGCGGACGG
CGCATGGTATT-GCGTGGCCCTGTG----TGCTCGCTCGTCTTTCTCGCAGCAGGCCTGTTTCGCCCGTCCCCGCACA--
------------------------------AA----------------------CCATATATACCCAGACAACCCTAGTT
TGGTTCAGGCACAGC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------AAACACA
CAATCAACCTCCCACTCCCGGCGCACCA------AAGGCAACGACGCGCTGCTAAG---TTAGCTACA----CGCACCAA
CACATAATG------------GCTTGCGCCTTCTTCTTCGACGCCGAGCCGGTCAGCGAGCC------------CGGCGT
GCACGCCCTGGACGCGTGCGCACTCTGCACCAAGCCGCTGGCAAGGGACAGCGACATCTTCATGTACAGAGGGGACACGC
CCTTCTGCAGCGACGAGTGCCGCCACGAGCAGATGCGGCTCGATGCCGCTTGC------------GCCAGGGCGGCCGCC
CGGAGGCAGAAGCAGTTCTCTACGGGAACTGGG-TCCGGGCGTGCACGCCGGGAGTGCTGGGAGGTGTCCGTCGCCAGCT
AACCGGTGACGGTGCCAGGCTGCCTACG-----------------------CACTAGAGCCAACAAGATGTGCGTGCACG
AAGACGCCGCCGTCGCCCGTGGCCAACTGATCA------GCGCGGGATCGAGGAGACTCGCCTTGGTTGAAG----AAGC
AAG----ACGCGGGCCATCG----GAGTTGCTCCCGGCAGGCCGGCGATGCATGTGCCGCCGGTCAAGTGATTTGGGCAT
AAACGCAGCGG-AAAAGGAGCTGCACTGGATCTGAACAAGTCAACTCAAA-CGAGATTCACCACGCAA------TCAGGC
GGCC-ATGT-----GTGGCCCTCAAC---TCTTTT----------TTTTTT--CCTGCGTTTATATGTCACTTCTGTTCT
GTATGA-AGCGAATTTGC-------AATTGCACTTTCACTGGG---------------------------------T---
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>chr2A_808
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----------------------CTGGCCCTGTGTGCTCGTCCCGCCCGCGCCGAGCCTGTTTTCTCCT------------
C---------------------------GCCGGTCCGTGTTCGTCCCGGCGTAGCCATATATACCCAG---ACCTCAGTT
TGGTTCAG-CACAGC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------AAGCAC-
---TCAACCTCCCACTCCCGGCGCACCA------A---------CCCACTGCCAAG---CTAGCTACG----CGCACGAG
CTCTCCATGGCCGCATCGGTAGCCTGCGCCTTCTTCTTCGACGCCGAGCCGGTCGGCGAGCC------------CGGCGT
GCACGCCCTGGACGCGTGCGCGCTCTGCACCAAGCCGCTGGCAAGGGACAGCGACATCTTCATGTACAGAGGGGACACGC
CCTTCTGCAGCGACGAGTGCCGGCACGAGCAGATGCAGCTGGACGCCGCCTGCGCCAGGCAGGCGGCCAGGGCGGCCGCC
CGGAGGCAGAAGCAGTTCTCTTCAGCAACGGAG-TCCGGGCGTGCACGCCGGGAGTCCTGGGAGGTGTCCGTCGCGAGCT
AAGCGGCGAGAGTGGCAGAGACCGTATG-----------------------TACTTGAGCTAACAAGCTCCGCATGGAAG
AA---GCTGCCGTTGCCCT----------ATCA------GCGCGAGATCGAGGAGACTCTCCTTGGTTGAAG----AAGC
AAG----ACGCGGGCTATCG----GACTCTCTTACGGCAGCGTTGGCA------GGCCGCCGGTCAAGTGATTTGGGCAT
AAACGCAGCGG-AAA-GGAGCTGGACTGGATCTGAAGAAGTCAATC--AA-CAAGATTCTCCACGCAA------TTAGGC
GGCCCATGT-----GTGCCCCGAGCAGTCCCTCGGCTCTCCTTTT-----CTCCTGCGTCA--------GTGTAACTTCT
GTATGATTCCGAATTTGC--------------------------------------------------------------
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>chr2D_886
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------------------------------------------------------CCATATATACCAAGACGACCCTAGTT
TGGTTCAG-CACAGC-----------------------------------------------------------------
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-------------------------------------------------------------------------AAACACT
CAATCAACCTCCCACTCCCGGCGCACCA------AGACCAACAACCCACTGC-AAG---CTAGCTACG----GGCACGAG
CTCGACATGGCCGCATCGGTAGCCTGCGCCTTCTTCTTCGACGCCGAGCCGGTCGGCGAGCC------------CGGCGT
GCACGCGCTGGACGCGTGCGCGCTCTGCACCAAGCCGCTGGCGCGGGACAGCGACATCTTCATGTACAGAGGGGACACGC
CCTACTGCAGCGAGGAGTGCCGCCACGAGCAGACGCAGCTCGACGCCGCCTGCGCCAGGCAGGCGGCCAGGGCGGCCGCC
CGGAGGCAGAAGCAGTTCTCTTCGGGAACGGAG-TCCGGGCGTGCACGCCGGGAGTCCTGGGAGGTGTCCGTCACGAGCT
AACCGGCCAGAGCGGCAGGCTGGGTACG-----------------------T-------CCAACAAGATCTGAGTGCACG
AA---ACCGCCGTCGCCCGTGGCCAACTGATCA------GTGCGGGATCGAGGAGACTCGCCTTGGTTGAAG----AATC
AAG----ACGCGGGTCACCG----GAGTTGCTCACGGCAGGCCGGCGCTGCATGTGCCGCCGATCAGTTG----------
-------------AA-GGGGCTGGACTGGATCTGAAGAAGTCAACC--AGACAAGATTCACCACGCAA------TTAGGC
GGCC-ATGT-----GTGCCCCTCGCAGTCCCTCGGCTCTCCTTTT-----CTCCTGCGTCA--------ATGTCACTTCT
GTATGATAGCGAATTTGCTTTAGGCAATAGCACTTTCACTGGGTAAACTATCAAGCGAATCGACGTATAACATGTCTTTG
TGCAATCTTGTTTCTGTTCATGATTCAGCGTGCTGATGCA-----------AAGCTAATCCGTTGGATGTCTACCACACG
ATTTAAAACTCAATTTTGTTCT-AGACCTGGGGTGTCAAAAACCGAATCCCCATACTAATCTGATGGCTAAACTCGGTC-
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>chr2D_1004
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---------------------GCCTGCGCCTTCTTCTTCGACGCCGAGCCGGTGGGCGAGCCG------------GGCAT
GCCGGCGCTGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCACGCGACAGCGACGTCTTCATGTACAGGGGGGACACGC
CCTACTGCAGCAAGGAGTGCCGGCACGAGCAGATGCACCTCGACGCCGTCTCCGCCAGGCAGG------------CCGCC
CGGAGGCTGCAGCGGTTCTCGTCGGGAGCAGAG-TCCGGGCGTGCACGCC---------AGGGGGTGTCCGTCTCGAGCT
AACCGGCGAGAGTGCCAAGCGACATACGTGCCTGACGAAGAAAGGTTATTATGCTTGAGCCAGCATGATCTCCGTGCACC
AA---GCCGCTGGTGTCCGTGGTTAGCTGATCGAGCAGCGCGCGAGGTCGAGGAGACTTGCCATGCTTGAAG----AAGC
AAG----GGGCGGGTCGCAG----GAGTCGCTCACGGCAGGCCGGCGCTGCATGTGCCGCCTGTCAAGTGATTTGGGCAT
AAACGCAGCGG-AAAAGGGGCTGGATTGGATCTGAAGAAAGTCAAGCAAA-CAAGATTCCCCGCGGTTTAACTTTGAGGC
GGTC-ATGT-----CTGCCCCTCAGT---TTT---------TTTC-----TTTCTGCGTTA--------TTGTCACTTCT
GTAC-A-AGCTCATTTGC-------AATAGCACT----------------------------------------------
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>SNPs
-------S-----------S----------------------------------------S-------------------
--------------------------------------S-----------------------------S-----------
---------S--------------------S-SSSS-----------S--------------------------------
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-------------------------------------S-----------------S------------------------
------------------------------------------------------------------------S-------
-----------------S-------------------------SSSSSSS------------------------------
---------------------------------------------------------------S-------------SS-
--------------------------S-----------------------------------------------------
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--------------------SS-------------------S--------------------------------------
-------SS-S-S-SSSS--SSSSSSSS----------------------------------------------------
-------------S------------------------------------------------------------------
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----------------------------------------------------------------------------S---
----------SS--------S-------------------S-----S-----------------------------S---
-S-------------------------------------------------------------SSSSSSSSSSS------
------------------------------------------------------------------------S-------
----S--------------------S------------------------------------------------------
------------------------------------------S-----------------------S-------------
---S----S--------------------------------------------------S---------------S----
S--------------------S---------S-------------------S----------S-----------------
----------------------------------------------S---------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-------S------------------------------------------S-
-------SS----------------------------S----S----SS---------S--S-------------S---S
--------------------SS----S---S-------S----------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_527
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---------------------------GTTCAGGCCAGGGGTACTTC---------------------------------
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>reverse_4374
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-----------------------------------------------------AAGGTTTGGCCAGGTGAGTC-------
-----
