>input_sequence_85062
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---------------------------------------------------------------------ATGAGCGCGAG
CCTTGTTCTTGGCCTCCTGCTCGTCACCACCGTTGCTTGCCATGCTGCGAGGGACATCCCAGCAACTGAGCCCGAGTCCT
ACCGTCCCCAGAACGTCTTTGGGTTTGGTGGCTTCTACCCTGGCCCGTCGGTCAACTGGGTGTTTCCGGGGCCAAACGGC
GTCACACCACAGGTAGGGTTCGGCGGGATGCCGGGCTCTAGCTCCTTCCCTGGCACTGGTGGCTCGTCCGGCAGCAGTGG
CGTGGTCGGCATTCATGGTGCTGCCAATCCCTGA----------------------------------------------
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>chr7D_1_TraesCS7D01G332400
GCCAAATTTACTGTTGTAAAATTCATGGCTGAGTATAAGCTTCAAGTTTTGTCTAATCTTTTCCCTTGTAATTATGCAAT
AACACATCGCTATATATTCCTTGAACTTTCTAGCTTTGTTGTTCTAGTGAAGCCGAAGCTTGTAGCTTTCACTTTTTGCT
CTAGTTAGTTGCACCATATGGTTTTACTTGCCCGATTTTGGACACAATGTATCCAAATTGTAGTTGGCAAAACCTGATCA
ACGCTAGGGATACCTGTCAGCATATATCGCATACATTTGTTGTACTGGACTCTGGAGTCTGGATCACTCTGCTAATAAAT
TATTTCTTGTTAACTGTGCTAAG---------TCATCTTCTATCCCTTGAGTTGAGATCTGTCCTGAAACCTGCCTCTCC
TTTATTGGAGAAATGTTACAGTGTTGTCTGTCGATTCCCTATTGGTTTGTTCTGCCACAAAGCTGAGGATACCTTGAATT
TGCTGCAGACCTACCTGACATGGATCATGGGAGCTTAAATGTGGGTGGTTGGGAAGTTGTGGATGAAAAGTAAATTGGAG
CTTGGTTTCTGTTACGGTCCTGATATGAATGCTCTCGTTTACTGCCTTCT----CCTTGCAATCCTCTGTATGAGCCC--
---CCACTATACACCCAGCATCAAATAGTGTACATAAGTTCAGCATGTCAGGTCTA-GCT-------TTATGGTCTTAAC
TCAAGCTAGAA-GTACACCAACAGAGTAAACATGTATGGTCCCATGGAGATCTGCGGTCCATGTTTTGGTTTGACCGTAG
CCAAAACCTTTGGAGCCACTGGCATAGCTACGCTCACTGGCAGGTGGGTCCTGCCGCAAAGAAACACAAGTTAGGCTCAC
CTTTCAGTTTCAGTCACAGCCAC--CACAACGATCATGCACAGTACACTACACTAGCGGTTATAAAAGAGGGGGATGTGC
AACTTGCTCTTGGCCAAACCAGAAGGTCAGCAAGCAAAAGCAGTAGCAACAATGGAGAGGCGTAGCGGCATGAGCGCGAG
CCTTGTTCTTGGCCTCCTGCTCGTCACCACCGTTGCTTGCCATGCTGCGAGGGACATCCCAGCAACTGAGCCCGAGTCCT
ACCGTCCCCAGAACGTCTTTGGGTTTGGTGGCTTCTACCCTGGCCCGTCGGTCAACTGGGTGTTTCCGGGGCCAAACGGC
GTCACACCACAGGTAGGGTTCGGCGGGATGCCGGGCTCTAGCTCCTTCCCTGGCACTGGTGGCTCGTCCGGCAGCAGTGG
CGTGGTCGGCATTCATGGTGCTGCCAATCCCTGATCGTGTTGTTGTCTGTCTTGGTGTCTAGATGTTTAAGATTTTGCTC
TTTAGAGCTATGCAGGTGCAGCATTCTACCGTGGTGGTAGAGAGTAAGCTTCTTGCTTGCTCTAGTTTAGTAGTATTGTG
TTATGGCTTATGTGTTGTGTGTTGTTTACAAGTGATCTGTGTCCTGTGTCTGTGTAAAAGACTTGTTCTTGGTTGTTATT
TAACCTTGTGTACTTCTTACAGGTTGTATTGCTGTCGTGAGTTCGAAGTCCCATTGCTGTATCTTTGATTTGGAGAGTGA
GGATTTGAACCCATGAGCTGGATCACCACAACCTTGTCCTGTGTTCCGTGTCT-GTCTCTTT-AAGTATTTCCGTCATTC
TTCTCAGTGAGCTTTCAGT-----------------------------ATATCTTGGTTCTTGTTTATTTTCTGTGAGCA
TTCATGGGTTGGTTCAAATTGCGGCATCATCTTTAG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TTATGAATGGCTGGTTCTACTTATCTACTACAAATG
CCA----GTTGTAATGGGAACCGTTGACGAACTTCTAAGTAAACTAACCACTACTTGTACTTACATCATGTTCTTTGTTA
AGATGTTAGTCTTCCTATTTGAGATATGCACTGATTATATCACATAC----TCATGTAGCTAAAAGCCTAAAAGTACC-C
TGTAATTGCTAGTGGCCCTTGATGCTAATTTCTTTGAATGTGAATATGACATCTCGTTTGGGCCTCAATGAAGTATAAGA
AGGGTAAGTCAGCTTTTAGCATATAGGCAGATTAGTTTTCAATTTGAGTTCTATTTAAGAAAAATGCTCCCGATATTAGT
TTA----------------------------------ACTACTGGTATTTGATCTCTGGGTTAAAATATTTACTACTAAA
TATTTCTTGAGATAACAATCC-GTTGCCATTTATTAGCATAAATTTAAGAGTCCAAATAAAGGGGCATCTGTTTCTTGTG
CC-AAAATAAAGCTGAAAATATGGCGTTGGATGTCATCATCAGATTAGGAGTAGTTCTTGAAGAATCCCGCGTGTATG
>chr7A_1
GCCAAATTTACTGTTGTAAAATTCATGGCTGAGTATAAGCTTCAAGTTTTGTCTAATCTTTTCCCTTGCAATTATGCAAT
AACACATCGCTATATATTACTTGAACTTTCTAGCTTTGTTGTTCTAGTGAAGCCGAAGCTTGTAGCTCTCACTCTTTGCT
CTAGTTTGTTGCACCGTATGGTTTTGCTTGCCCGGTTTTGGACACAATGTATCCAAATTGTAGTTGGCAAAACCTGATCA
ACGCTAGGAAAACTTGTCAGTATGTATCACATACATTTGTTGTACTGGACTCTGGAGTCTGGATCACTCTTCTAATAAAT
CATTTCTTGTTAACCGTGAAGC-----------CATCTTCTACCCCTTGAGTTGAGATCTGTTCTGAAACCTGCCTGTCC
TTTATTGGAGAAATGTTACAGTGTTGTCTGTCGATTTCCTATTGGTTTGTTCTGCCACAAAGCTGAGGATGCCTTGAATT
TGCTGCAGACGTACCTGACATGGATCATGGGAGCTTAAATGTGGGTAGTTGGGTAGTTGTGGAGGAAGAGTAAATTGGAG
CTTGGTTCCTGTTACAGTCGTGATATGAATGCTCTCGTTTACTGCAGTCTGAGGCCTTGCAACCCTCGGTATGCGCACCC
AGGCCACTGTACACCCAGCATCAGATA-TGAACATAAGTTCAGTATGTCAAGTCTTAGCTTTATGAATTATGATCTTAAC
TCAAGCTAGAA-GTACACCAACAGAGTAAACATGTATGGTCCCATGGAGATCTGCGGTCCATGTTTTGGTTTGACCGTAG
CCAAAACCTTTGGAGCCACTGGCATAGCTACGCTCACTGGCAGGTGGGTCCTGCCGCAAAGAAACACAAGTTAGGCCCAC
CTTTCAGTTTCAGTCACAGCCAC--CGCAACGATCATGCACAGTACACTACACTAGCGGTTATAAAAGAGGGGGATGTGC
AACTTGCTCTTGGCCAAACCAGATGGTCGGCAAGCAAAAGCAGTAGCAACAATGGAGAGACGTAACGGCGTCAGCGCGAG
CCTTGTTCTTGGCCTCCTGCTCGCCACCACCGTTGCTTGCCATGGTGCAAGGGACATCCCAGCAACTGAGCCCGAGTCCT
ACCGTCCCCAGAACGTCTTTGGGTTCGGTGGTTTCTACCCTGGCCCGTCGGTCAACTGGGTGTTTCCGGGGCCAAACGGC
GTCACGCCACAGGTAGGCTTCGGCGGGATGCCGGGCTCTAGCTCCTTCCCTGGCACTGGTGGCTCGTCCGGCAGCAGTGG
CGTGGTCGGCATTCATGGTGCTGCCAATCCCTGATCGTGTTGTTGTCTGTCTTGGTGTCTTGATGTTTAAGCTTTTGCTC
TTGAGAGCTACGCAGGTGCAGCATTCTACCGTGGTGGTAGAGAGTAAGCTTCTTGCTTGCTCTAGTTTAGCAGTATTGTG
TTATGGCTTATGTGTTGTGTGTTGTTTTCAAGTGATCTGTGTCCCGTGTCTTTGTAAAAGACTTGTTCTTGGTTGTTATT
TAACCTTGTGTACTTCTTAGAGGTTGTATTGCTGTCGTGGGTTCGAAGTCCCATTGCTGTAACTTTGATTTGGAGAGTGA
GGATTTGAACCCATGAGCTGGATCACCACAACCTTGTCCTGTGTTCCGTGTCTCGTCTCTTT-AAGTATTTCCGTCATTC
TTCTCAGTGTGCTTTCAGTTTATTATGTTGTTGATTAAATGCATTTCCATATCTTTGTTCTTGTTTATTTTCTGTGACCA
TTCATAGGTTGGTTCAACTTGCGGCATCATCTTTAGTTATGG--------------------------ACATTGGTTAAG
CACCTGGAAGACTACAGCCAGCCAGTTATAATTGATAATTGTT--GCTCAGTGATAGGTCCCAGCTTGTTTAGAATATTC
GAACTTTTTTGCGTCAAGTTTATGGCCTTTTCCCCTCCTTTTCCTTATGAATGGCTGGTTCT-CTTATCTACTACAAATG
CCGAGAGGTTGTAATGGGAACCGTTGAAGATCTTCCAAGTAAACTAACCACTACTTGTACTTACATCATTTTCTTTGTTG
AGATGCTAGTCTTCCTGTTTGATATATGCACTGATTATATCACACTCATGTTCATGTAGCTAAAAGTCTAAAAGTACCTC
TGTAATTGCTAGTGGCCCTTGATGCTAATTTCTTTGAATGTGAATATGATGTCTCATTTGGGCCTGAACGAAGTATAAGA
AGGGCAAGTCAGCTTTTAGCATTTAAGCCGATTAGTTTCCATTACTAGTTCTCTTCAAGAAAAATGCTCCCGATATTAGT
TTA----------------------------------AC-------------------------------TACTACTAAA
TATTTCTTGAGATGACAATTCAGTTGCCATTTATTAGCATAAATTTAAGAGTCCAAATAGAGGGGCATCTGTTTCTTGTG
CCCAAAACAAAGCCGAAAATACGGCGGTGAATGTCATTGTCAGATTAGGAGTAGTTCTTGAAGAATCCCGCTTGTATG
>chr7B_1
GCCAAATTTACTGTTGTAAAATTCATGGCTGAGTATAAGCTTCAAGTTTTGTCTAATCTTTTCCCTTGCAATTATGCA--
------TCGCTATATATTAATTGAACTTTCTAGCTTTGTTGTTCTAGTGAAGCCGAAGCTTGTAGCTCCCACTCTTTCCT
CTAGTTTGTTGCACCGTATGGTTATGCTTGCCCAGTTTTGGACACAATGTATCCAAATTGTAGTTGGCAAAACCTGATCA
ACACTAGGAAAACTTGTCAGCATATATCGCATATATTTGTTATACTGGACTCTGGAGTCTGGTT-ACTCTACCAATAAAT
TATTTCTTGTTAACCGTGCTAAGGTGCCTAAGTCATCTTCTATCCCTTGAGTTGAGATCTGTTCCGAAACCTGCATGTCC
TTTATTGGAGAAATGTTACAGTGTTGTCTGTCGATTTCCTATTGGTTTGTTCTGCCACAAAGCTGAGGATGCCTTCAATT
TGCTGCAGACCTACCTGACATGGATCATGGGAGCTTAAATGTGGGTAGTTGGGTAGTTGTGG-GGAAGAGTAAATTGGAG
CTTGGCTTCTGTTACGGTCCTGGTATGAATGCTCTTGTTTACTGCAGTCTAAGGCCTTGCAACCCTCGGTATGCGCACCC
AGGCCACTGTACACCCAGCATCAGATA-TGTACATAAGTGCAGTATGTCAAGTCTTGGCT-------TTATGATCTTAAC
TCAAGCTAGAAAGTACACCAACAGAGTAAACATGTATGGTCCCATGGAGATCTGCGGTCCATGTTTTGGTTTGACCGTAG
CCAAAACCTTTGGAGCCACTGGCATAGCTACGCTCACTGGCAGGTGGGTCCTGCCGCAAAGAAACACAAGTTAGGCCCAC
CTTTCAGTTTCAGCCACAGCCATAACACAACGATCATGCACAGTACACTACACTAGCGGTTATAAAAGAGGGGGATGTGC
AACTTGCTCTTGGCCAAACCAGAAGGTCGGCAAGCAAAAGCAGTAGCAACAATGGAGAGGCGTAGCGGCGTGAGCGTGAG
CCTTGTTCTTGGCCTCCTGCTCGCCACCACCGTTGCTTGCCATGGTGCGAGGGACATCCCAGCAACTGAGCCCGAGTCCT
ACCGTCCCCATAACGTCTTTGGGTTCGGTGGTTTCTACCCTGGCCCGTCCGTCAACTGGGTGTTTCCGGGGCCAAACGGC
GTCACACCACAGGTAGGCTTCGGCGGGATGCCGGGCTCTAGCTCCTTCCCTGGCACTAGTGGCTCGTCCGGCAGCAGTGG
CGTGGTCGGCATTCATGGTGCTGCCAATCCCTGATCGTGTTGTTGTCTGTCTTGGTGTCTTGATGTTTAAGA--TTGCTC
TTTAGAGCCATGCAGGTGCAGCATTCTACCGTGGTGGTAGAGAGTAAGCTTCTTGCTTGCTCTAGTTTAGCAGTATTGTG
TTATGGCTTATGTGT---GTGTTGTTTTCAAGTGATCTGTGTCCCGTGTCTTTGTAAAAGACTTGTTCTTGGCTGTTATT
TAACCTTGTGTACTTCTTAGATGTTGTATTGCTGTCGTGGGTTCGAAGTCCCTTTGCTGTATCTTTGATTTGGAGAGTGA
GGGTTTGAACCCATGAGCTGGATCACCACAACCTTGTCCTGTGTTCCGTGTCTCGTCTCTTTTAAGTATTTCCATCATTC
TTCTCAGTGTGCTTTCAGTTTATTATGTTGTTGATGAAATGCATTTCCATATCTTTGTTCTTGTTTATTTTCTGTGACCA
TTCATAGGTTGGTTCAACTTGCGGCATCATCTTTAGTTATGGAACACTGGGTAGCATTGATATTGTGCACATTGGTTAAG
CACCTGGAAGACTACAGCCAGCCAGTTATAATTGATAATTGTTATGCTCAGTGATAGGTCCCAGCTTGTTG----TATTC
GAACTTTTTTGCATCAAGTTTATGGCCTTTTCCCCTCCTTTTCCTTATGAATGGCTGGTTCT-CTTATCTACTACAAATG
CCGAGAGGTTGTAATGGGAACCGTTGAAGATCTTCTAAGTAAACTAACCACTACTTGTACTTACATCATTTTCTTTGTTG
AGATGCTAGTCTTCCTGTTTGATATATGCACTGATTATAT--CACTCATGTTCATGTAGCTAGAAGTCTAAAAGTACCTC
TGTAATTGCTAATGGCCCTTGATGCTAATTTCTTTGAATGTGAATATGATGTCTCATTTGGGCCTCAACGAAGTATAAGA
AGGGCAAGCCAGCTTTTAGCATTTAAGCCGATTAGTTTTCATTACTAGTTCTGTTCAAGAAAAATGCTCCCGATATTAGT
TTAACTACTGGTATTTGATCTTAGGGTTAAAATATCTAC-------------------------------TACTACTAAA
TATTTCTTGAGATAACAATTCAGTTGCCATTTATTAGCATAAATTTAAGAGTCCAAATAGAGGGGCATCTGTTTCTTGTG
CCCAAAACAAAGCCAAAAGTACGGCGATGAATGTCATTGTCAGATTAGGAGTAGTTCTTGAAGAATCCCGCGTGTATG
>SNPs
--------------------------------------------------------------------S-----------
------------------S------------------------------------------------S-----S------
------S--------S---------S--------S---------------------------------------------
--------S-S--S--------------------------------------------------------S---------
--------------S-----------------------------------------------S-------------S---
------------------------------------S---------------------------------S---------
----------------------------------------------S------S---------S---S------------
---------------------------------------------SS---------------S----S-----S--S---
--------S--------------S---S---------------S------S----S----------------S-------
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----------------------------------------------------------------------------S---
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----------------------------S----------------------------------------S----------
-----------------------S--------------------S-----------------------------------
-------------------------S-----S------------------------------------------------
-----------------S--------------------------------------------------------------
------------------------------------------------------------S-------------------
----------------------------------------------------------------------S---------
---------------------------S----------------S------S----------------------------
-------------------S-------------------S----------------------------------------
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---------S---------------------------------------------S---------------------S--
-----S-----------S--------------------------------------------------------------
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--------------------------------------------------------------S-----------------
--S------------------------S--S--------------------------------------S---------S
-----S----------S-----S---------------------SS--------------------S-------------
-------------------------------------------------SS----S------------S-----------
----S-----------------S--S--S------------S-SSS------S--S------------------------
---------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
-------------------S---------------------------------------S--------------------
-------S-----S-------S----S--S-------SS---------------------------------------
>forward_397
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---------------------------------------------------------TCTGTCCTGAAACCTGCCTC---
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>reverse_1766
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-----GGGTTGGTTCAAATTGCGGC-------------------------------------------------------
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