>input_sequence_85044
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCT
AACCAAGAAGACATGCCAAACAAGTGGGAGGACGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCGACATCCCGCCATG
TTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCACCGACCGAAATAAATCATGGATGGAAGGGCGGAGATATTTTGTAT
GCCCGAACTATGCTTATGACTGTGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGTTA
CTATAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr6D_1_TraesCS6D01G232900
GCCTTAATCATATGGAAGTGAAGGAGGGAAGTTAGGGAAGTGTAGCTTAGGTGACTTTCCTCCTTCACGTTAGATGTTAG
AGGATCCACTACCGGCAGCCACATGACCGAACTACCGCGGCGGCAGGCAGAGCCACCAATGCTGGTAGATATCACATATT
TGACCTGAGGGCGAAATCAAATCATAAACTGACCTGCTTTCGACAAAATTTCACTCGGCTGACCCTTTCGTGTGGCGCCC
GACAGCTAGGCGCCGCACACTACTATGCAGCGCCTCTGCCTTAGGCGTCGCACCTCCTGCCAGCGTGGCAGCTCTGGTCC
AGTTGCGGCCCCACAGACAGCACTGCAGCGCCTAAGGCTTAGGCGCCACACTGTGTAAAGTGCAGCGCCTATCGCTTGGG
CGCTGCACAGTTTGTGTTCCACTTAGGCTGGCCCGACCCTCTCTCCCCTCCCACCCCACCCCACACACCCCCACCCCACC
CAACCCTTAGACTTGCGCCCCTCCTCTCTTCCCCTCTCCCCCCTCTCAAATCCTTCTCAAATCTTGCAAATCCGGAGTAT
TTGACCATGGATTTCGAAGCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCT
TAAGGTAATCTCCTCCGATCCCCTCGTTTTCATCCATAGGAATTGTCACATTTGCTCAAATCTTGCTACTTTGGGGAAAC
CCTAGTTTTGGCTTGGATTTGCAAATTTGTGTTGAATGATGTTATG-CTTCTTTGCTAATTTGGTATGGTTAGGCTTTCA
TAGTATGCTAGGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGATTGTGGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTGTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCT
AACCAAGAAGACATGCCAAACAAGTGGGAGGACGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCGACATCCCGCCATG
TTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCACCGACCGAAATAAATCATGGATGGAAGGGCGGAGATATTTTGTAT
GCCCGAACTATGCTTATGACTGTGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGTTA
CTAT-AAATGTGTGTCAACACTAACAAAAATTTTGTATGCAGTCACCGCCTCCTCCATGCAAGTACTTCACGTGGATAGA
TCTTGAAGTGCCAGAAGATGTCAAAAAGAACCAATACCAAGATTGTCTTAGGCGGCAACGGCGGTTCGAAGAATCGTTTC
GAAGAGGATTTGAGGAAGAGCGTCGTCAGAAGGAGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCG
AAACGTGCTCGTGAGGAGGAGAGGGTAAGAAAGCTTGCAAAGGCTTGCGAGGCGCAAGAGGAGGACTCGGCCCGTGACAA
GAAGGGGAAATGGCCTCGCTCTACTCAGTAGGGACTTCGCTTCGGTGCACTCGTCGTCAACTATCTTCTACTGAATGTGT
CGTGAACTTGTGAGGGCATGTGAGATGCTGGTGAAGTATCTTCTAGGGCAAGCTGCCATTTGTCATTTGTAATGAATGTG
TCATGAACCATGTCGTAGTAACATTTGAATTGTCTTAAGTTATGAACTCATCGGCATAAAATTTGTGTTTGTTCAAATTG
CTGTGATGCTGCAG---TCAATGTAAGTATTATGTTGTTCCGGTGAAATGAATGTGCTGTAAACTCTGTTTTTTCAGTAA
ACAGCCGTGCAGCGCCCAGAACACAGGCGCTGCACAATACCATGCAGCGCCCAAGGGATAGGCGTCACACAGTACAGTGC
AGCGCCTGGCTCTTGGGCGCTGCCCTCTGACTTGGTAATTTTCGTGGATGGTCAGTGCTGCAAGCCTTCTGTGGCTCT-T
TGGATAGCCATGGCCAGTTGAGCAGCGCCTATGAGACGGGCGCTGCACTGTATGGTGCGGCGCCTAAGCGTGGGGCGCTG
CACAGTACAGTGCA-----GCGCCTGGCTGTTGGGCGCTGCATGTTGGAAATATACCCGAGAGGCAATAATAAAATGGTT
ATTATTGTATTTCCTTGTTCATGATAATTGTCTATTGTTCATGCTATAATTGTATT
>chr3D_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCT
TAAGGTAATCTCCTCCGATCCCCTCGTTTTCATCCATAGGAATTGTCACATTTGCTCAAATCTTGCTACTTTGGGGAAAC
CCTAGTTTTGGCTTGGATTTGCAAATTTGTGTTGAATGATGTTGTG-CTTCTTTGCTAATTTGGTATGGTTAGGCTTTCA
TAGTATGCTAGGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGATTGTGGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTGTAGGCATGGCTTCATCCGGTTCCATGACAAGGCCACCGTGTGCT
AACCAAGAAGACATGCCGAACAAGTGGGGGGACGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCGACATCCCGCCATG
TTGGTGTGGAGATGTTTTCAAGGTGAAGGTGTCCACCGACCGAAATAAATCATGGACGGAAGGGCGGAGATATTTTGTAT
GCCCGAACTATGCTTATGATCGTGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGTTA
CTATCAAATGTGTGTCAACACTAACAAAAATTTTGTATGCAGTCACCGCCTCCTCTATGCAAAAACTTCACGTGGATAGA
TCTTGAAGTGCCAGAAGATGTCAAAAAGGACCAATACCAAGCTTGTCTTAGGCGGCAATGGCGGTTCGAAGAATCGTTCC
GAACAGGATTGGAGGAAGAGCGTCGTCAGAAGGAGAGGATGGAGCGGAAGAAACGAGAGGAGGATAGGGCACGCCAAGCG
AAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAGCTTGCAAAGGCTCGCGAGGCGCAAGAGGAGGACTCGGCCCGTGACAA
GAAGGGGAAATGGCCTCGCTCTACTCAGTAGGGACTTTGTTTCGGTGCACTCGTCGTCAACTATCTTCTACTGAATGTGT
CGTGAACTTGTGAGGGCATGTGAGATGCTGGTGAAGTATCTTCTAGGGCAAGCTGCCATTTGTCATTTGTAATGAATGTG
TCGTGAACCATGTCGTAGTAACGTTTGAATTGTCTTAAGTTATGAACTCATCGGCATAAAATTTGTCTTTGTTCAAATTG
CCGTGATGCTGCAG---TCATTGTAAGTATTATGTTGTTCCGGTGAAATGAATGTGCTGTAAACTCTGTTTTTTCAGTAA
ACAGCCGTGCAGCGCCCAGAACACAGGTGCTGCACTATACCATGCAGCGCCCAAGGGATAGGCGTCACACAGTACAGTGC
AGCGCCTGGCTCTCGGGCGCTGCACTCTGACTTGGTAATTTTCGTGGATGGTCAATGCTGCAAGCCTTCTGTGGCTCT-T
TGGATAGCCATGGCCAGTTGAGCAGCGCCTATGAGATGGGCGCTGCACTGTATGGTGCGGCGCCTAAGCGTGGGGCGCTG
CACAGTACAGTGCA-----TCGCCTGGCTGTTGGGCGCTGCA--------------------------------------
--------------------------------------------------------
>chr3D_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCT
TAAGGTATTCTCCTCCGATCCCCTCGTTTTCATCCATAGGAATTGTCACATTTGCTCAAATCTTGCTACTTTGGGGAAAC
CCTAGTTTTGGCTTGGATTTGCAAATTTGTGTTGAATCATGTTATGTTTTTTTTGCTAATTTGGTATGGTTAGGCTTTCA
TAGTATGCTAGGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGGTTGTGGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTGTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCT
AACCAAGAAGACATGCCGAACAAGTGGGAGGACGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCAACATCCCGCCATG
TTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCACCGACCGAAAGAAATCATGGACGGAAGGGCGGAGATATTTTGTAT
GCCCGAACTATGCTTATGATCGTGCACTTCCAACAAACACCTATGACCAACCACCAGTAAGCTCGAGAAGTAAAATGTTA
CTATCAAATGTGTGTCGACACTAACAAAAATTTTGTATGCAGTCACCGCCTCCTCTATGTAAGTACTTCACGTGGATAGA
TCTTGAAGTGCCAGAAGATGTCAAAAAGGACCAATACCAAGATTGTCTTAGGCGGCGACGACGGTTCGAAGAATCGTTTC
GAAGAGGCTTGGAGGAAGAGCGTCGTCAGAAGGAGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCG
AAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAGCTTGCAAAGGCTCGCGAGGCGCAAGAGGAGGACTCGACACGTGACAA
GAAGGGGAAATGGCCTCGCTCTACTCAGTAGGGACTTCGCTTCGGTGCACTCGTCGTCAACTATCTTCTAATGAATGTGT
TGTGAACTTGTGAGGGCATGTGAGATGTTGGTGAAGTATCTTCTAGTGCAAGCTGCCATTTGTCATTTGTAATGAATGTG
TCATGAACCATGTCGTAGTAATGTTTGAATTGTCTGAAGTTATGAACTCATCGGCATAAAATTTGTGTTTGTTCAAATTG
TTGTGATGCTGCAG---TTATTGTAAGTATTATGATGTTCCGGTGAAATGAACGTGTTGTAAACTTTGTTTTTCCAGTAA
ACAGCCGTGCAGCGCCCAGAACACAGGCGCTGCACTATACTGTGCAGCGCCCAAGGGATAGGCGTCACACAGTACAGTGC
AGCGCCTGGCTCTCGGGCGCTGCACTCTGACTTGGTAATTTTCGTGGATGGTCAGTGCTGCAAGCCTTCTGTGGCTCT-T
TGGATAGCCATGGCCAGTTGAGCAGCGCCTACGAGATGGGCGCTACACTGTATGGTGCGGCGCCTAAGCGTCGGGCGCTG
CACAGTACAGTGCTGTTAGGCGCCTGGCTGTTGGGCGCTGCA--------------------------------------
--------------------------------------------------------
>chr3D_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCT
TAAGGTAATCTCCTCCAATCCCCTCGTTTTCATTCATAGGAATTGTCACATTTGCTCAAATCTTGCTACTTTGGGGAAA-
CCTAGTTTTGGCTTGGATTTGCAAATTTGTGTTGAATCATGTTATG-TTTCTTTGCTAATTTGGTATGGTTAGGCTTTCA
TAGTATACTAGGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGGTTGTGGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTCTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCATGTGCT
AACCAAGAAGACATGCCGAACAAGTGGGAGGACGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCAACATCCCGCCATG
TTGGTGTGGAGATGTTTGCAATGTGAAGGTGTCCACCGACCGAAAGAAATCATGGACGGAAGGGCGAAGATATTTTGTAT
GCCCGAACTATGCTTATGATCGTGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGTTA
CTATCAAATGTGTGTCAACACTAACAAAAATTTTGTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGA
TCTTGAAGTGCCAGAAGATGTCAAAAAGGACCAATGCCAAGATTGTCTTAGGTGGCAACAGCGGTTCGAAGAATCGTTTC
GAAGAGGCTTGGAGGAAGAGCGTCGTCAGAAGGAGAGGATGGAGCGGAAGAAACAAGAGGAGGAGAGGGCACGCCAAGAG
AAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAGCTTGCAAAGGCTCGCGAGGCGCAAGAGGAGGACTCGGCACGTGACAA
GAAGGGGAAATGGCCTCGCTCTACTCAGTAGGGACTTCTCTTCGGTGCACTCGTCGTCAACTATCTTCTAATGAATGTGT
CGTGAACTTGTGAGGGCATGTGAGATGTTGGTGAACTATCTTCTAGGGCAAGCTGCCATTTGTCATTTGTAATGCATGTG
TCGTGAACCATGTCGTAGTAATGTTTGAATTGTCTTAAGTTATGAACTCATCGGCATAAAATTTGTGTTTGTTCAAATTG
CTGTGATGCT---G---TCATTGTAAGTATTATGATGTTCCGGTGAAATGAACGTGCTATAAACTCTGTTTTTCCATTAA
ACAGCCGTGCAACGCCCAGAACACAGGCGCTGCACTATACTGTGCAGCGCCCAAGGGATAGGCGTCACACAGTAGAGTGC
AGCGCCTGGCTCTTGGGCGCTGCACTCTGACTTGGTAATTTTCGTGGATGATCAGTGCTGCAAGCCTTCTGTGGCTCT-T
TGGATAGCCATGGCCAGTTGAGCAGCGCCTATGAGACGGGCGCTGCACTGTATGGTGCGACGCCTAAGTGTTGGGCGCTG
CACAGTACAGTGCA-----GCGCCTGGCTGTTGGGCGCTGCAGTGTTG--------------------------------
--------------------------------------------------------
>chr5D_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCT
TAAGGTAATCTCCTCCGATCCCCTCGTTTTCATCCATAGGAATTGTCACATTTGCTCAAATCTTGCTACTTTGGGGAAAC
CCTAGATTTGGCTTGGATTTGCAAATTTGTGTTGAATGATGTTATG-TTTCTTTGCTAATTTGGTATGGTTAGGCTTTCA
TAGTATGCTAGGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGATTGTGGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTTTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCT
AACCAAGAAGACATGCCGAACAAGTGGGAGGGCGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCGACATCCCGCCATG
TTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCACCGACCGAAATAAATCATGGACGGAAGGGCGGAGATATTTTGTAT
GCCCGAACTATGCTTATGATCGTGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGTTA
CTATCAAATGTTTGTCAACACTAACAAAAATTTTGTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGA
TCTTGAAGTGCCAGAAGATGTCAAAAAGGACCAATACCAAGATTGTCTTAGGCGGCAACGGCGGTTCGAAGAATCGTTTC
GAAGAGGCTTGGAGGAAGAGCGTCGTCAGAAGGAGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCG
AAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAGCTTGCAAAGGCTCGCGAGGCGCAAGAGGAGGACTCGGCCCGTGACAA
GAAGGGGAAATGGCCTCGCTCTACTCAGTAGGGACTTCGCTTCGGTGCACTCGTCGTCAACTATCTTCTACTGAATGTGT
CGTGAACTTGTGAGGGCATGTGAGATGCTGGTGAAGTATCTTCTAGGGCAAGCTGCCATTTGTCATTTGTAATGAATGTG
TCGTGAACCATGTCGTAGTAACGTTTGAATTGTCTTAAGTTATGAACTCATCGGCATAAAATTTGTGTTTGTTCAAATTG
CTGTGATGCT---GCAGTCATTGTAAGTATTATGTTGTTCCGGTGAAATGAATGTGCTGTAAACTCTGTTTTTTCAGTAA
ACAGCCGTGCAGTGCCCAGAACACAGGCGCTGCACTATACCATGCAGCGCCCAAGGGATAGGTGTCACACAGTACAGTGC
AGCGCCTGGCTCTTGGGCGCTGCACTATGACTTGGTAATTTTCGTGGATGGTCAGTGCTGAAAGCCTTCTGTGGCCCTCC
-GGATAGCCATGGCCAGGTCGGCATCGCCTATGAGACGGGCGCTGCACTGTACTGTGCAGTGCCTAGGCGTTGGGCGTCA
CACAGTACTGTGCA-----GCGCCTGTCTGTTGGGCGCTGCA--------------------------------------
--------------------------------------------------------
>chr5D_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCT
TAAGGTAATCTCCTCCGATCCCCTCGTTTTCATCCATAGGAATTGTCACATTTGCTCAAATCTTGCTACTTTGGGGAAAC
CCTAGTTTTGGCTTGGATTTGCAAATTTGTGTTGAATGATGTTATG-CTTCTTTGCTAATTTGGTATGGTTAGGCTTTCA
TAGTATGCTAGGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGATTGTGGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTGTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCT
AACCAAGAAGACATGCCGAACAAGTGGGAGGACGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCGACATCCCGCCATG
TTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCACCGACCGAAAGAAATCATGGACGGAAGGGCGGAGATATTTTGTAT
GCCCGAACTATGCTTATGATCGTGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGTTA
CTATCAAATGTGTGTCAACACTAACAAAAAATTTGTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGA
TCTTGAAGTGCCAGAAGATGTCAAAAAGGACCAATACCAAGATTTTCTTAGGCGGCAACGGCGGTTCAAAGAATCGTTTC
GAAGAGGCTTGGAGGAAGAGCGTCGTCAGAAGGAGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCG
AAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAGCTTGCAAAGGCTCGCGAGGCGCAAGAGGAGGACTCGGCCCGTGACAA
GAAGGGGAAATGGCCTCGCTCTACTTAGTAGGGACTTCGCTTCGGTGCACTCGTCGTCAACTATCTTCTAATAAATGTGT
CGTGAACTTGTGAGGGCATGTGAGATGTTGGTGAACTATCTTCTAGGGCAAGCTGCCATTTGTCATTTGTAATGAATGTG
TCGTGAACCATGTCGTAGTAACATTTGAATTGTCTTAAGTTATGAACTCATCGGCATAAAATTTGTGTTTGTTCAAATTG
CTGTGATGCT---GCAGTCATTGTAAGTATTATGTTGTTCCGGTGAAATGAATGTGCTGTAAACTCTGTTTTTTCAGTAA
ACAGCCGTGCAGCGCCCAGAAAACAGGCGCTGCACTATACTATGCAGCGCCCAAGGGATAGGCGTCACACAGTACAGTGC
AGCGCCTGGCTCTTGGGCACTGCACTATGACTTGGTAATTTTCGTGGATGGTCAGTGCTGAAAGCCTTCTGTGGCCCT-T
-GGATAGCCATGGCCAGGTCGGCAGCGCCTATGAGACGGGCACTGCACTATACTGTACAGCGCCTAGGAGTTGGGCGCTG
CATAGTACAGTGCA-----ACGCCTGTCTTTTGGGCGCTGCA--------------------------------------
--------------------------------------------------------
>chr5D_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCT
TAAGGTATTCTCCTCCGATCCCGTCGTTTTCATCCATAGGAATTGTCACATTTGCTCAAATCTTGCTACTTTGGGGAAAC
CCTAGTTTTGGCTTGGATTTACAAATTTGTGTTGAATCATGTTATG-TTTCTTTGCTAATTTGGTATGGTTAGGCTTTCA
TAGTATGCTAGGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGGTTGTGGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTGTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCT
AACCAAGAAGACATGCCGAACAAGTGGGAGGACGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCAGCATCCCGCCATG
TTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCACCGACCAAAAGAAATCATGGACGGAAGGGCGGAGATATTTTGTAT
GCCCGAACTATGCTTATGATCATGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGTTA
CTATCAAATGTGTGTCAACACTAACAAAAATTTTGTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGA
TCTTGAAGTGCCAGAAGATGTGAAAAAGGACCAATACCAAGATTGTCTTAGGCGGCAACGGCGGTTCGAGGAATCGTTTC
GAAGAGGCTTGGAGGAAGAGCGTCGTCAGAAGGAGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCG
AAAATTGCTCATGAGGAGCAGAGGGCAAGAAAGCTTGCAAAGGCTCGCGAGGCGCAAGAGGAGGACTCGGCACGTGACAA
GAAGGGGAAATGGCCTCGCTCTACTCAGTAGGGACTTCACTTCGGTGCACTCGTCGTCAACTATCTTCTAATGAATGTGT
CGTGAACTTGTGAGGGCATGTGAGATGTTGGTGAACTATCTTCTAGGGCAAGCTGCCATTTGTCATTTGTAATGAATGTG
TCGTGAACCATGTCGTAGTAATGTTTAAATTGTCTTAAGTTATGAACTCATCGGCATAAAATTTGTGTTTGTTCAAATTG
CTGTGATGCT---GCAGTCATTGTAAGTATTATGATGTTTCGGTGAAATGAACGTGTTGTAAACTCTGTTTTTCCAGTAA
ATAGCCGTGCAGCGCCCAGAACACAGGCGCTGCACTATACTGTGCAGCGCCCAAGGGATAGGCGTCACACAGTACAGTGC
AGCGCCTGGCTCTTGGGCGCTGCACTCTGACTTGGTAATTTTCGTGGATGGTCAGTGCTGCAAGCCTTCTGTGGCTCT-T
TGGATAGCCATAGCCAGTTGAGCAGCACCTATGAGACGGGCACTGCACTGTATGGTGCGGCACCTAAGCATTGGGCGCTG
CACAGTATAGTGCA-----GCGC-----TGTTGGGCGCTGCA--------------------------------------
--------------------------------------------------------
>chr1D_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCT
TAAGGTAATCTCCTCCGATCCCCTCGTTTTCATC--TAGGAATTGTCACATTTGCTCAAATCTTGCTACTTTGGGGAAAC
CCTAGTTTTGGCTTGGATTTGCAAATTTGTGTTGAATGATGTTATG-CTTCTTTGCTAATTTGGTATGGTTAGCCTTTCA
TAGTATGCTAGGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGATTGTGGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTGTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACTGTGTGCT
AACCAAGAAGACATGCCGAACAAGTGGGAGGACGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCGACATCCCGCCATG
TTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCACCGACCGAAATAAATCATGGACGGAAGGGCGGAGATATTTTGTAT
GCCCGAACTATGCTTATGATCGTGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAACTGTTA
CTATCAAATGTGTGTCAACACTAACAAAAAATTTGTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGA
TCTTGAAGTGCCAGAAGATGTCAAAAAGGACCAATACCAAGATTGTCTTAGGCGGCAACGGCGGTTCGAAGAATCGTTTC
GAAGAGGCTTGGAGGAAGAGCGTCGTCAGAAGGAGAGGATGGAGCGGAAGAAACGAGAGGAGGAGATGGCACGCCAAGCG
AAACTTGCTCGCGAGGAGGAGAGGGCAAGAAAGCTTGCAAAGGCTCGCGAGGCACAAGAGGAGGGCTCGGCCCGTGACAA
GAAGGGGAAATGGCCTCGCTCTACTCAGTAGGGACTTCGCTTCGGTGCACTCGTCGTCAACTATCTTCTACTGAATGTGT
CGTGAACTTGTGAGGGCATGTGAGATGCTGGTGATGTATCTTCTAGGGCAAGCTGCCATTTGTCATTTGTAATGAATGTG
TCGTGAACCATGTCGTAGTAACGTTTGAATTATCTTAAGTTATGAACTCATCGGCATAAAATTTGTGTTTGTTCAAATTG
CTGTGATGCT---GCAGTCATTGTAAGTATTATGTTGTTCCGGTGAAATGAATGTGCTGTAAACTCTGTTTTTTCAGTAA
ACAGCCGTGCAGCGCCCAGAACACAGGCGCTGCACTATACCATGCAGTGCCCAAGGGATAGGCGTCACACAGTACAGTGC
AGCGCCTGGCTCTTGGACGCTGCACTATGACTTGGTAATTTTCGTGGATGGTCAGTGCTGAAAGCCTTCTGTGGCCCTCT
-GGATAGCCATGGCCAGGTCGGCAGCGCCTGTGAGACGGCCGCTACACTGTACTGTGCAGCGCCTAGGCATTGGGCGTCA
CACAGTACTATGCA-----GCGCCTGTCTGTTGGGCACTGCA--------------------------------------
--------------------------------------------------------
>chr7D_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCT
TAAGGTATTCTCCTCCGATCCCCTCGTTTTCATCCATAGGAATTGTCACATTTGCTCAAATCTTGCTACTTTGGGGAAAC
CCTAGTTTTGGCTTGGATTTGCAAATTTGTGTTGAATCATTTTATG-TTTCTTTGCTAATTTGGTATGGTTAGGCTTTCA
TAGTATGCTAGGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGGTTGTAGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTGTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCT
AACCAAGAAGACATGCCGAACAAGTGGGAGGACGCATCTTTGGACAAGGTGAAGGAGAAAGATGTCAACATCCCGCCATG
TTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCACCGACCGAAAGAAATCATGGATGGAAGGGCGGAGATATTTTGTAT
GGCCGAACTATGCTTATGATCGTGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGTTA
CTATCAAATGTGTGTCGACACTAACAAAAATTTTGTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGA
TCTTGAAGTCCCAGAAGATGTCAAAAAGGACCAATACCAAGATTGTCTTAGGCGGCAACGGCGGTTCAAAGAATCGTTTC
GAAGAGGCTTGGAGGAAGAGCGTCATCAGAAGGAGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCG
AAACTTGCTCGTGAGGAGGAGAAGGAAAGAAAGCTTGCAAATGCTCGCGAGGCGCAAGAGGAGGACTCGGCATGTGACAA
GAAGGGGAAATGGTCTCTCTCTACTCAGTAGGGACTTCGCTTCGGTGCACTCGTCGTCAACTATCTTCTAATGAATGTGT
CATGAACTTGTGAGGGCATGTGAGATGTTGGTGAACTATCTTCTAGGGCAAGCTGCCATTTGTCATTTGTAATGAATGTG
TCGTGAACCATGTCGTAGTAATGTTTGAATTGTCTGAAGTTATGAACTCACCGGCATAAAATTTGTGTTTGTTCAAATTG
TTGTGATGCT---GCAGTCATTGTAAGTATTATGATGTTCCAGTGAAATGAACGTGCTGTAAACTTTGTTTTTCCAGTAA
ACAGCCGTGCAGCGCCCAGAACACAGGTGCTGCACTATATTGTGCAGCGCCCAAGGGATAGGCGTCACACAGTACAGTGC
AGTGCCTGGCTGTTGGGCGCTGCACTCTGACTTGGTAATTTTCGTGGATGGTCAGTGCTGCAAGCCTTCTGTGGCTCT-T
TA-ATAGCCATGGCCAGTTGAGCAGCGTCTACGAGACGGGCGCTGCACTGTATGGTGCGGCGCCTAAGCGTCGGGCGCTG
CACAGTACAGTGCA-----GCGCCTGGCTGTTGGGCGGTGCA--------------------------------------
--------------------------------------------------------
>chr4D_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCT
TAAGGTAATCTCCTCCGATCCCCTCGTTTTCATCCATAGGAATTGTCACATTTGCTCAAATCTAGCTAGTTTGGGGAAAC
CCTAGTTTTGGCTTGGATTTGGAAATTTGTGTTGAATCATGTTATG-TTTCTTTGCTAATTAGGTATGGTTAGGCTT-CA
TACTATGGTACGGTTAGGGTTATGTGTGTTTGATGTTGGTGTTAGGGTTATGCTATGGTTAGGGTTGTGGTTATTGTTAA
GTGGGGGTTAGGGTTAACCAAGAATTCTCGGTTTTGTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCT
AACCAAGAAGACATGCCGAACAAGTGGGAGGACACATCTTTGGACAAGGTGAAGGAGAAAGATGTCAACATCCCGCCATG
TTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCACCGACCGAAAGAAATCATGGACGGAAGGGCAGAGATATTTTGTAT
-GCCGAACTATGCTTATGATCGTGCACTTCCAACTAACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGCTA
CTCTCAAATGTGTGTCAACACTAACAAAAATTTTGTATGCAGTCACCGCCTCCTCTATGCAAATACTTCACGTGGATAGA
TCTTGAAGTGCCAGAAGATGTCCAAAAGGACCAATACCAAGATTTTCTTAGGCGGCAACGACGGTTCGAAGAATCGTTTC
GAAGAGGCTTGGAGGAAGAGCGTCGTCAGAAGGTGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCG
AAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAGCTTGCAAAGGCTCGCGAGGCGCAAGAGGAGGACTCGGCACGTGACAA
GAAGGGGAAATGGCCTCGCCCTACTCAGTAGGGACTTCGCTTCGGTGCACTCGTCGTCAACTATCTTCTAATGAATATGT
CGTGAACTTGTGAGGTTATGTGAGATGTTGGTGAACTATCTTCTAGGGCAAGCTGCCATTTTTCATTTGTAATGAATGTG
TCGTGAACCATGTCGTAGTAATGTTTGAATTGTCTTAAGTTATGAACTCATCGGCATAAAATTTGTGTTTGTTCAAATTG
CTGTGATGCT---GCAGTCATTGTAAGTATTATGATGTTCCGGTGAATTGAACGTGCTGTAAACTCTGTTTTTCCAGTAA
ACAGCAGTGCAGCGCCCAGAACACAGGCGCTGCACTCTACTGTGCATCGCCCAAGGGATAGGCATCACACAGTACAGTGC
AGCGCCTACGTCTTGGGCGCTGCACTCTGACTTAGCAATTTTCGTGGATGGTCAGTGTTGCAAGCCTTCTGTGGCTCTCT
-GGATAGCCATGGCCAGTTGAGCAGCGCCTATGGGACGGGCACTGCACTGTATAGTGCGGCGCCTCAGCGTTGGGCGCTG
CACAGTACAGTGCA-----GCGCCTAACTGTTGGGCACTGCA--------------------------------------
--------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------SS-----------------------------------------------------------
-------------------------------------------------------S------------------------
----------------------------S---------------------------------------------------
----------S---------------------------------------------------------------------
----S--------------------S-------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
-----------------------------------S--------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_391
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TGTGTAAAGTGCAGCGCCTA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_1451
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGAGGAAGAGCGTCGTCAGA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
