>input_sequence_84936
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-----------ATGTACACAGCCAATGGGAGGCGCTTTGAGGTAGCATTGGTGTACCTCAGCACGACGATCTTCAGCGAG
CTCCTGAGGATGTCCCAGGAGGCGTTTGGCTTCGCAAGCGATGACAAGATCACACTGCGTTGTGATGCCGGAGTGATGG-
AGTATG----TCATGTGCTTGCTCAGGCGAAATGCCTCTGTCGAAGTCGAGAACGCACTGCTGATCTCCATGGTGACATC
TTGTCACTACACTGGTTGCGCAATTCCAACTGTTGGAGCCAGCAAGCAAAT-----------------------------
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----------------------------------------------------------------------TGGTTGTTTG
TAG-----------------------------------------------------------------------------
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------------------------------------------------------------------
>chr5D_1_TraesCS5D01G350200
TGAAGAATGACACAGGAGCTTTGCCTATCATTCAACGGAAAAACAGAGGGTGTACATTCAAGTATGCATACCACATGAGT
TTAACAAATCTTACCTGCCTAGAATTAGATGAAAGAAAACTTCCATTA-ACTGCTGAATAACTAATGGACACCTGCAGAT
TGAGCAACTCAGAAC-------TAGTTACCAAACACTTGAATAATCCTAGATAAAAATCTCAGTTTTGTGAAGAATTAAG
TAGTGAAATATACCTTTCAGAACAGAGTTTGTATTTCTTTCTTTCTGACTTAGAAGTCAAACT-GGGGGGAAAGAGTGAA
ATGGAGACCACATGAGATGCTGGACGTGGATCGGATCACAAGCTGAAAAAACAGTGACATCTGTTGAGCAAATGGATTCA
GGAAGACGAACGCATCTGACCGATCAACAACCAATCTGAGGCCGAAAGTTAAGAGGCGACCGATCATTGACACTGATGAT
ATATAAACCCGATCCATCCAT-ATCCAAATCACAGAATAGATCATGGCCTTGTCT-TCACCAGCTTGCCAAACTGACAAA
TGATATGAGAGCAAACCAATGGTTTAATGCCACCGCTATTGGATCCAGCACGTTCCAAACATTTGGGCCCATCACAATCA
AATCCAAATGAATC--ATACTACAACACTGCATGTGCTGATCCCATGG------CCATGTCTCTTGCCATCTTTTGT-AA
TGACAACTACACTTCACCAT----CACCATGTCCTT--------CCTCTCGGAAATAAATTCAGTGGACGGCTATGCTCA
ACAC--------CATCAGCTCATACACCACCAACTAAGCATTACAGCATCCATAGCTCACTTCTCTGG-TGTTCAGCTGA
AAAACAAGACCCGG----AAACAACCATGATCAGCGCCAAGCGACTTGCTCAATTGGCAAAGAAGTGGCAGAGGATGGCA
GCATTTAAGAGGAAGAGGCTGA------CAACAACAGCCAAAGAAAATGAGAAGTGCAGCATCTCTGTAGCAGTCAAAGG
GCCACTGTGTCATGTACACAGCCAATGGGAGGCGCTTTGAGGTAGCATTGGTGTACCTCAGCACGACGATCTTCAGCGAG
CTCCTGAGGATGTCCCAGGAGGCGTTTGGCTTCGCAAGCGATGACAAGATCACACTGCGTTGTGATGCCGGAGTGATGG-
AGTATG----TCATGTGCTTGCTCAGGCGAAATGCCTCTGTCGAAGTCGAGAACGCACTGCTGATCTCCATGGTGACATC
TTGTCACTACACTGGTTGCGCAATTCCAACTGTTGGAGCCAGCAAGCAAAT-----------------------------
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----------------------------------------------------------------------TGGTTGTTTG
TAGCTCCTGAAGAACATGCATGCAGAG--CCTGTTCTTGTTCTCTGTTTTCTGTAGTTTACCTGGATAGCGTA-GATAG-
---TTAGATATAAGCAAC--GGAGAAGGAAAATTGCTGTGTAATGCACTATAATCTTGCAAGCAATCAAGCAGCAACGCC
AGTAGATGCAGTTGTTTTTCTTGTAGATATACATTGCATTCAGTGAATAAATAATTGATGCAACTGTTCATT-CAGATGC
CAATAATTCCAT--------------------------------------------------------AGCCAGGTTATT
AGGGGGGAAAG---------------------------------------------------AATGATGAAATTT-----
----------------------------------TGAGAGAAGCTATTAAAGGGCCATCGGGACTTTGAGATAAGAAATA
AGCAAGTAGTACATAAATCACAAAAGAAAAGATAAATTAGTACTTACCAGTGTATGGAAGATTTTATTCTTAAAAAGGAA
ATCATCAACGTTTAAACGTTACTGAACAACTGGACACCCCTGAATCCAAACAACTTTGCATTAGGCAGTTGGCAGCCTGA
AAATACTCAAGGACAATTACGCC-------ACCTGGCATGTGTTTGTTACTCATAATCTTCAGCTT---CATTTGAAACC
ATGGTTAGCAGGCTTGCTTGCAGGCTTGGAAGATCAAACACTTGTGAAACAAACACTCAAGACATTTGTTAATCAATGTC
AATTTGTTCATGTCAGTGTGTGAACATTTGTATGTATCTTCATCA---------AACTAAAGGACATGCAAAATATATAG
ATGCATGGTGCATGAATTAAAATAGAAGCCATGTAATACAGCACGACAAAAGTAACATTCATATTATTACTAACAGAACT
TGGTGCCAAACAAATTACGTTGTACAAAATTAGTTATAGCGAGCATGCACACAGGGCACACCTTGATAGCAACTATTACT
ACTACTCACGAGTTAAGACAGACTCGATCGCTGACAAGTAGCGTAATAC--------ATACATAAGTAGTTGTTCTTGGC
TCGACAACAATGATGCAGCAAACTACGTAAGGAAGACAACTAAGGATACATCAACTACCCTCCTTC
>chr5D_1
TGAAGAATGACATAGGAGCTTTGCCTATCATTGAACACGAAAACAGAGGGTATAGATTCAAGTATGCATACCACATGAGT
TTAACAAATGTTACCTGCCTAGAATTAGATGAAAGAAAACTTCCATTAAACTGCTGAATAACTAATGGACACCTGCAGAT
TGAGCAACTGAGAACTAGTTAGTAGTTACCAAACACTTGAATAATCCTAGATAAAAATCTCAGTTTTGTGAAGAATTAAG
TAGTGAAATATACCTTTCAGAACAGAGTTTGTATTTCTTTCTTTCTGACTTAGAAGTCAAAATGGGGGAAAAAGAGTGAA
ATGGA---------------------TGGATCAGATCACAAGCTGAAAAAACAGCGACATCTGTTGAGCAAATGGATTCA
GGCAGACGAACGCATCTGACCGATCAACAACCAATCTGAGGCCGAAAGTTAAGAGGCGACCGATCATTGACAGTGATAAT
ATCTCAACCCGATCCATCCAT-ATCCAAATCACAGAATAGATCATGGCCTTGTCT-TCACCAGCTTGCCAAACTGACAAA
TGATATGAGAGCAAACCAATGGTTTAATGTCACTGCTATTGGATCCAGCATGTTCCAAACATTTGACCCCATCACAATCT
AATCCAAATGAATC--ATACTACAACACTGCATGTGCTGATCCCATGGCCATGACCATGTCTCTTATCATCTTTTGT-AA
TGACAACTACACTCCACCCT----CACCATGTCCTT--------CCTCTCGGAAAAAAATTCAGTGAACGGCTATGCTCA
ACAC--------CATCAGCTCATACACCACCAACTAAGCATTGCAGCATCCATACCTCACTTCTCTGG-TTTCCAGCTGA
AAAACAAGAGCCGG----AAACAACCATGGTCAGCGCCAAGCGACTTGCTCAATTTGCAAAGAAGTGGCAGAGGATGGCA
GCATTTAAGAGGAAGAGGCTGA------CAACA---GCCAAAGAAGATGAGATGTGCTGCATCTCTGTAGCAGTC-AAGG
GCCACTGTGTCATGTACACAGCCAATGGGATGCGCTTTGAGGTAGCATTGGTGTACCTCAGCACGACGATCTTCAGCGAG
CTCCTGAGGATGTCCCAGGAGGCGTTGGGCTTCGCAAGCGATGGCAAGATCACACTGCCTTGTGATG-----------G-
AGTATG----TCATGTGCTTGCACAGGAGAAATGCCACT-TCGAAGTCGAGAACGCGCTGCTGAGCTCCATGGTGACTTC
TTGTCACTACACTGGTTGCACAATTCTAACTGTTGGAG--------CAAAT-----------------------------
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----------------------------------------------------------------------TGGCTGTTTG
TAGCTCCTGAAGAACATGCATGCAGAG--CATGTTCTTGTCCTCTGTTTTCTGTAGTTTACCTGGATAGTGTA-GATAG-
---GTAGATATAAGAAAT--GGAGAAGGAAAATTGCTGTGTATTGCACTATAATCTTGCAAGCAATCAAGCAGCAACGCC
AGTAGCCGCAGTTGTTTTTCTCGTAGATATACATTGCATTCAGTGAATAAATATTTGATGCAACTGTTCATT-TAGATGC
CAATAGTTCCAT--------------------------------------------------------AGCCAGGTTATT
AGGGGGAAAAG---------------------------------------------------AATGATGAAATTT-----
----------------------------------TGAGAGAAGCTATTAAAGGGCCATCGGGACTTTGGGATAAGAAATA
AGCAAGTAGTACATAAATCACAAAAGAAAAGATAAATTAGTACTTACCAGTGTATGGAAGATTTTATTCTTAAAATGGAA
ATCATCAACGTTTAAACATTACTGAACAACTGGACACCCCTGAATCCAAACAACTTTGCATTAGGCAGTCGGCAGACTGA
AAATACTCAAGGACAATTACGCC-------ATCTGGCATGTGTTTGTTAATCATAATCTTCAGCTT---CATTTGAAACC
ATGGTTAGCAGGCTTGCTTGCAGGCTTGGAAGATGAAACACTTGTGAAACAAACACTCAAGACATTTGTTAATCAATGTC
AATTTGTTCATGTCAGCTTGTGAACATTTGTATGCATCTTCATCA---------AACTAAAGGACGGGCAAAATATATAG
ATGCATGGTGCATGAATTAAAATAAAAGGCATGTAATACAGAACGACAAAAGTAACATTCATATTATTACTAACAGAACT
TGGTGCCAAACAAATTACGTTGTACAAAATTAGTTATAGCGAGCAAGCGCACA-GGCACAGCTTGATAGCAACTATTACT
ACTACTCAAGAGTTAAGACAGACTCGATCGCTGACAAGTAGCGTAATACACTAATGCATACATAAGTAGTTGTTCTTGGC
TCGACAACGATGATGCAGCAAACTACATAAGGAAGCCAAAT-AGGATACATCAACAACCCTCCTTC
>chr5B_1
TGAAGAATGACACAGGAGCTTTGCCTATCATTGAACGGAAAAACAGAGGGTGTACATTCAAGTATGCATATCACATGAGT
TCAACAAATGTTACCTGCCTAGAATTAGATGAAAGAAAACTTCCATTAAACTGCTGAATAGCTAATGTACACCTGCAGAT
TGAGCAACTGAGAACTAGTTA-------TCAAACACTTGAATAATCCTAGATAAAGATCTCAGTTTTGTGAAGAATTAAG
TAGTGAAATATACCTTTCAGAACAGAGTTTGTATTTCTTT--------CTTAGAAGTCAAAATGGGGGAAAAAGAGTGAA
ATGGAGACCACATGAGATGCTGGACGTGGATCAGATCACAAGCTGAAAAAACAGCGACATCTGTTGAGCAAATGGATTCA
GGCAGACGAACGCATCTAACCGATCAACAACCAATCTGAGGCCAAAAGTTAAGAGGCGACCGATCATTGACACTGATGAT
ATATCAACCCGATTCATCCAT-ATCCAAATCACAGAATAGATCATGGCCTTGTCT-TCACCAGCTTGCCAAACTGACAAA
TGATATGAGAGCAAACCAATGGTTTAATGCCACCGCTATTGGATCCAGCATGTTCCAAACATTTGGCCCCATCACAATCA
AATCCAAATGAATC--ATAGTACAACACTGCATGTGCTGATCCCATGGCCATG------TCTCTTGCCATCTTTTGT-AA
TGACAACTACACTTCACCAT----CACCATGTCCTT--------CCTCTCGGAAATAAATTCAGTGAACGGCTATGCTCA
ACAC--------CATCAGCTCATACACCACCAAAC-AGCATTACAGCATCCATAGCTCACTTCTCTGG-TTTCCAGCTGG
AAAACAAGACCCGG----AAACAACCATGATCAGCGCCAAGCGACTTGCTCAATAGGCAAAGAAGTGGCAGAGGATGTCA
GCATTTAAGAGGAAGAGGCTGA------CAACAACAGCCAAAGAAAATGAGAAGTGCAGCATCTCTGTAGCAGTC-AAGG
GCCACTGTGTCATGTACACAGCCAATGGGAGGCTCTTTGAGGTAGCATTGGTGTACCTCAGCACGACGATCTTCAGCGAA
CTGCTGAGGATGTCCCAGGAGGCGTTTGGCTTCGCAAGCGATGACAAGATCACACTGCCTTGTGATGCCGGAGTGATGG-
AGTATG----TCATGTGCTTGCTCAGGCGAAATGCCTCCGTCGAAGTCGAGAACGCACTGCTGATCTCCATGGTGACATC
TTGTCACTACACTGGTTGCGCAATTCCAACTGTTGGAGCCAGCAAGCAAAT-----------------------------
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----------------------------------------------------------------------TAGTTGTTTG
TAGCTCCTGAAGAACATGCATGCAGAG--CCTGTTCTTGTTCTCTGTTTTCTGTAGTTTACCTGGATAGTGTA-GATAG-
---TTAGATATAAGCAAT--GGAGAAGGAAAATTGCTGTGTAATGCACTATAATCTTGCAAGCAATCAAGCAGCAACGCC
AGTAGACACAGTTGTTTTTCTTATAGATATACATTGCATTCAGTGAATAAATAATTGATGCAACTGTTCATT-CAGATGC
CAATAGTTCCAT--------------------------------------------------------AGCCAGGTTATT
AGGGGGAAAAG---------------------------------------------------AATGATGAAATTT-----
----------------------------------TGAGAGAAGCTATTAAAGGGCC-TCGGGACTTTGGGATAAGAAATA
AGTAAGTAGTACATAAATCACAAAAGAAAAGATAAATTAGTACTTACCAGTGTATGGAAGATTTTATTCTTAAAAAGGAA
ATCATCAACGTTTAAACATTACTGAACAACTGGACAACCCTGAATCCAAACAACTTTGCATTAGGCAGTCGGAAGCCTGA
AAATACTCAAGGACAATTACGCC-------ATTTGGCATGTGTTTGTTAGTCATAATCTTCAGCTT---CATTTGAAACC
ATGGTTAGCAGGCTTGCTTGCAGGCTTGGAAGATGAAACACTTGTGAAACAAACACTCAAGACATTTGTTAATCAATGTC
AATTTGTTCATGTCAGCCTGTGAACATTTGTATGCATCTTCATCA---------AACTAAAGGACAGGCAAAATATATAG
ATGCATGGTGCATGAATTAAAATAAAAGGCATGTAATACAGAACGACAAAAGTAACATTCATATTATTACTAACAGAACT
TGGTGCCAAACAAATTACGTTGTACAAAATTAGTTATAGCGAGCAAGCGCACAGGGCACAGCTTGATAGCAACTATTACT
ACGACTCAAGAGTTAAGACAGACTCGATCGCTGAAAAGTAGCATAATACACTAATGCATACATAAG---------TTGGC
TCGACAACGATGATGCAGCAAACTACATAAGGAAGCCAAAT-AGGATACATCAACAACCCTCCTTC
>chr5B_1
TGAATAATGACATAGGAGCTTTGCCTGTCATTGAACAGAAAAACAGAGGGTGTAGATTCAAGTATGCATACCACATGAGT
TTAACAAATGTTACCTGCCTAGAGTTAGATGAAAGAAAACTTCCATTAAACTGCTGAATAACTAATTGACACCTGCAGAT
TGAGCAAATGAGAACTAGTTA-------CCAGACACTTGAATAATCCTAGATAAAAACCTCAGCTTTGTGAAGAATTAAG
TAGTGAAATATACCTTTCAGAACAGAGTTTGTATTTCTTTCTTTCTGACTTAGAAGTCAAAATGGGGGAAAAAGAGTGAA
ATGGAGACTACATGAGATGATGGACGTGGATCGGATCACAAGCTGAAAAAACAGCGACATCTGTTGAGCAAATGGATTCA
GGAAGACGAACGCATCTGACCGATCAACAACCAATCTGAGGCCAAAAGTTAAGAGGCGACCGATCATTGAAACTGATGAT
ATATCAACCCGATCCATCTGT-ATCCAAATCACAGAATAGATCATGGCCTTGTCT-TCACCAGCTTGCCAAACTGACAAA
TGATATGAGAGCAAACCAATGGTTTAATGCCACGGCTATTGGATCCAGCATGTTCCAAACATTTGGCCCCATCACAATCA
AATCCAAATGAATC--ATACTACAACACTGCATGTGTTGATCCCATGGCCATG------TCTCTTGCCATCTTTTGT-AA
CGACAACTACACTTCACCAT----TACCATGTCCTT--------CCTCTCGGAAGTAAATTCAGTGAATGGCTATGCTCA
ACAC--------CATCAGCTCATATACCACCAACTAAGCATTACAGCATCCATAGCTCACTTCTCTGG-TTTCCAGCTGA
AAAACAAGACCCGG----AAACAACCATGATCAGCGCCAAGCGACTTGCTCAATTGGCAAAGAAGTGGCAGAGGATGGCA
GCATTTAAGAGGAAGAGGCTGA------CAACAACAGCCAAAGAAAATGAGAAGTGCAGCATCTCTGTAGCAGTC-AAGG
GCCACTGTGTCATGTACACAGCCAATGGGAGGCGCTTTGAGGTAGCATTGGTGTACCTCAGCACGACGATCTTCAGC---
---CTGAGGATGTCCCAGGAGGCGTTTGGCTTCGCAAGCGATGGCAAGATCACACTGCCTTGTGATGCCAGAGTGATGGG
AGTATG----TCATGTGCTTGCTCAGGCGAAATGCCTCTGTCGAAGTCGAGAACGTGCTGCTGATCTCCATGGTGACATC
TTGTCACGACACTGGTTGCGCAATTCCAGCTGTTGGAGCCAGCAAGCGAAT-----------------------------
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----------------------------------------------------------------------TGGTTGTTTG
TAGCTCCTGAAGAACATGCATGCAGAG--CCTGTTCTTGCTCTCTGTTTTCTGTAGTTTACCTGGATAGTGTGC-ATAG-
---TTAGATATAAGCAAT--GGAGAAGGAAAATTGCTGTGTAATGCACTATAATCTTGCAAGCAATCAAGCAGCAACGCC
AGTAACCGCAGTTGTTTTTCTCGTAGATATACATTGCATTCAGTGAATAAATAATTGATACAACCGTTCATT-TAGATGC
CAATAGTTCCAT--------------------------------------------------------AGCCAGGTTATT
AGGGGGAAAAG---------------------------------------------------AATGAATAAGTGCCATGA
CCAGGTGATACAAGAGCATTTTTGAATGATGAAATGAGAGAAGCTATTAAAGGGCCATCAGGACTTTGGGATAAGAAATA
AGCAAGTAGTACATAGATCACAAAATAAAAGATAAATTAGTAATTAGCAGTGTAAGGAAGGTTTTCTTCTTAAAATGGAA
ATCATCAACGTTTAAACGTTACTGAACAACTGGACACCCCTGAATCCAAACAACTTCGCATTAGGCAGTCGGCAGCCTGA
AAATACTCAAGGACAATTACGCC-------ATTTGGCATGTGTTTGTTACTCATAATCTTCAGCTT---TATTTGAAACC
ATGGTTAGCAGGCTTGCTTGCAGGCTTGGAAGATGAAACACTTGTGAAACAAATACTCAAGACATTTGTTAATCAATGTC
AATTTGTTCATGTCAGCCTGTGAACATTTGTATGCATCTTCATCA---------AACTAAAGGACAGGCAAAATATATAG
ATGCATGGTGCATGAATTAAAATAACAGGCATGTAATACAGAACGACAAAAGTAACATTCATATTATTACTAACAGAACT
TGGTGCCAAACAAATTACGTTGTACAAAATTAGTTATAGCGAGCAAGCGCACAGGGCACAGCTTGATAGCAACTATTACT
ACTACTCAAGAGTTAAGACAGACTCGATCGCTGACAAGTAGCGTAATACACTAATGCATACATAAGTAGTTGTTCTTGGC
TCGACAATGATGATGCAGCAAACTACATAAGGAAGCCAAAT-AGGATACATCAACAACCCTCCTTC
>chr5D_453
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-------------------------------------------------------------GATCATTGCCACTGATGAT
ATCTAAAAGTAATCCTTCCATAATCTGAATCACAGAACAGAAAATGGCCTTATCCCTCACCAGCTTGCTACACTGACAGA
TGATATGAGAGCAAACCTATGCTTTG-----------------------ATGCTCCAAACATTT-GGCCCAGCACAATCT
AATCCAAATTAATC--ATACTACAACATTGCATGTGTTGATCCCATGGTCTTT------TCCCCTGTTATCTTTTCT-GA
TGACAACTAC--TTCACAGC----CACAATGTCTTT--------CCTCTGGGCTATAAATTCAGCAAACGACTATGATTG
ACAC--------CATCAGCTCATACACCACCAACTAAGCATTACATCAGGCATAGCTCACTTTTCTGAATTTCCAGCTGA
AAAATAAGACCCGTAATCAACCAACCATGATCAGCACCACGTGACTTGCTCAGTTGGCAAAGAAGTGGCAGAGGATGGCT
GCACTTAAGAGGAATAAGCTGACGACAGCAACA---ACCAAAGAAGATGAGAAGTGCTGCATCTCTGTAGAAGTC-AAGG
GCCACTCTGTCATGTACACAACTGATGGGAGGCGCTTCGAGGTACCATTGGTGTACCTCAGAACGACGACCTTCAGTGAG
TTCCTGACGATGTCCCAGGAAGAGTTTGGCTTCTCAAGCCATGGCAAGATCACACTGCCTTGTGTTGCCGAAGTGATGG-
AGTATG----TCATATGCTTGCTCAGGAGAAATGCCTCTGCCGAGGTCGAGAACGCGTCGCTGAGCTCTATGGTGACATC
TTGTCACCACATTGGTTGCACAATGCCAACTGTTGGAGCCAACAAGCAAAC-----------------------------
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----------------------------------------------------------------------TTGCTATTTG
TAGCTCCTGAAGAACATGCATGCAGAG--CTTGTTCTTGTCCTCTGTTTTCAATAGTTTACTTTGATAGTTGA-------
---------------------------------------GTAATGCACTGCAATCTTGAAAGCAATCAACCGGGAACATA
TT-----------------------------CATTGTATACAGTGAATAAATAATTGCTGCACCTGTTCATT-TAGATGT
CGATTTATCAATACTGCTTTCATAAAGCTGAATGGAAAATACACAAGTTTTAATACACCTATCATCTAAGCCAGGTTATT
AGGGGAAAATAGAATGAATAAGTGACATGACCAGGTGATACAATCATACAGGAGCCATTTTCAATGATGAACCTT-----
----------------------------------TCAGATAAACTTTCAAAGGGCCATCGGGAACTTGGGATAAGGCATA
ATCAAGTAGCATATAAATCACAAAATAAAAGAGAAAATAGTACTTACAGTACAAGGAAGA--TTTGTTCTTAAAATAGAA
ATCATCAAAGTTTAAATGTTACTGAAGAACTGAACACCCCTGAATCTATACAACTTTGCATACGGCAGTGGGCAGCCTGA
AAATACTCAATGACAATTGTGCCAGCACAGATTTGGCATGTGTTTGCTATTCGTAATTGTCACCTATACTATTTGAAACC
ATGGTTAGCAGGCTTG------------GAAGATCAAACACTTGTGAAACAAACACTCAAGACTTTCGTCAATCAACGTC
AATTTGTTCATGTCAACATGTGAACATCTGCATGTATCACTGCACCATCATCAGAAATAAAGGGCAGGCAAAATATATAG
ATGCATGGTGCATGAATTAAAATAGAAGCTTTGTAATACAATATGACAAAAGTAACATTTAGATTATTAATAACAGAACT
TGGTGCCATACAAATTAAATTGTACGAAATTAGTTATAGC----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr5D_453
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-------------------------------------------------------------GATCATTGACACTGATGAT
ATCTCAACCTGATCCATCCAC-ATCCAAATCACAGAACAGATCACCGCCTTGTCCCTCACCAGCATGCCAAACTGACAAA
TGATATGAGAGCAAACCAATGGTCTATGCTATG-----TTGGATCCAGCATGTTCCCC----------------------
-------------C--ATCACACAACACTGTATGTGCTGATCAC-TGGCCATG------TCCCTTGCCATCTTTTGT-AA
TTACAACTACACTTCAACGT----CACGATGTCCTT--------CCGCTTGGCTATAAATTCAGCAAACGGATATGCTCA
AAAC--------CATCAGCTCATACAGCACCAACAGAGCATTACAGCATCCATACCTCACTTATTCAAATTTCTAGCTGA
AAAACAAGACCCAG----AAACAACCATGATCAGCGCCAAGCGACTTGCTCAATTGGCAAAGAAGTGGCAGAGGATGGCA
GCAAGCGG----AAGAGGCT---GACAGCAACA---GCCATAGAAGAAACAGAGTGCTGCATCTCTGTAGCGGTC-AAGG
GCCACTGTGTCATGTACACGGTTGATGAGAGCCGCGTCGAGGTACCATTGGTGTACCTCAGCACGACGATCTTCAGCAAG
CCCCTGAAGATGTCCCAGGAGGAGTTTGGCTTCGCTAGCGATGGCAAGATCACACTGCCTTGTGATGCCAGAGTGATGG-
AGTATATATATCATGTGCTTGCTCAGGAGAAATGCCTCTCCCGAGGTTGAGAATGCGTTGCTGAGCTCTGTGGTGGCATC
TTGACAACACACTGGTTGCGCAATGCAAACCGTTGGAGCCAGCAAACAA-------------------------------
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--------------------------------------------------------------------ATTTGCTATCTG
TAGCTCCTGAAGAACATACATTCAGAG--CCTGTTCTTGTCCTCTGTTTTCTGTAGTTCACCTGGATAGTGTA-GATAGA
AAGTTTAATGTAGGCAAT--AGGAGAGGGACAAAATTGTGTTT-----TACAATCTTGCAAGCAATCAAGCAGGAACACC
AGCAGTCACTATTGTTCTTCTCTTACATATACATAGCATACATTGAATAAATAATGGATGTGTCTGTTCAAGCTAGATGC
CAATAGTTCCAT--------------------------------------------------------A-----------
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------------------------------------------------------------------
>chr5D_574
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------------------------TATTGCTACCACTATTGGCTCCAGCATGCCCCAAACATTTGGCCCCATCACAATCT
ACTCCAAAGTGATC--ATGCTGCAACACTGCATGCGCTGATCACATGGCCTTG------TCCCTGGCCAACTCTTCAGAG
TGACAACTACTCTTCACCAG----CACAATGCCCTT--------CACCTTGCCTATAAATTCAGGGAGCGGCTAAGCTCA
ATACCATCACTTCATCAGCTCATCGACCACCAACTGAGCACTACAACACCCATAGCTCACTTTCTCTGGAGCTGA----A
AAAACAAGACCCAG----AACAAACCATGATTAGCACGAAGAGACTTGCTCAACTGGGAAAGAAGTGGCAAAGGGTGGCG
GCACTTGGGAGGAAGAGGCT---CACAGTGACA---GCCAAAGAAGATGAAGAATGCTGCACCTCTGGAGTGGTA-AAGG
GCCACTGCATCACGTACACGGCCGACGGAAGCCGTTTCGAGGTCCCGTTGGTGTACCTCAGCACGATGGTCTTCGGAGAG
CTCCTAAGAGTGTCCCAGGAAGAGTTTGGTTTCGCAAGCAAAGGAAAGATCACACTGCCTTGTGATGCCGCAGTGATGG-
AGTATG----TCATGTGCTTGCTCAGCAGAGATGCCTCTGCCGAGGTCAAGAAGGCATTGCTGAGTTCTATGGTGATATC
TTGCCACTACACTGTTTCTGTGATGCCAACTGTTGGAGACAGCCAGAAAATTTGCTGTTCGTAACTGCTGAAAAACATGC
GTGCAGAGACCCTAATGTTGTCTTCTGCTTGTTGTAGTTTATACCTGGATAGTGTATGAGAGTTAGATAATAGGCAATAG
GAAAAGGAAATTGTTATGTAAAGCTTTTTGATCATGCAAGCAACCAAGCAG-----------------------------
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>chr5B_577
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---------------------------TGCTACCACTATTGGCTCCAGCATGCCCCAAACATTTGGCCCCATCACAATCT
ACTCCAAAGTGATC--ATGCTGCAACACTGCATGCACTGATCACATGGCCTTG------TCCCTGGCCAACTCTTCACAG
TGACAACTACTCTTCACCAG----CACAATGCCCTT--------CACCTTGCCTATAAATTCAGGGAGCGGCTAAGCTCA
ATACCATCACTTCATCAGCTCATCCACCACCAACTGAGCACTACAACACCCATAGCTCACTTTCTCTGGAGCTGA----A
AAAACAAGACCCAG----AACCAACCATGATTAGCACGAAGAGACTTGCTCAACTGGCAAAGAAGTGGCAGAGGGTGGCG
GCACTTGGGAGGAAGAGGCT---CACAGTGACA---GCCAAAGAAGATGAAGAATGCTGCACCTCTGGAGTGGTA-AAGG
GCCACTGCATCATGTACACGGCCCACGGAAGCCGTTTCGAGGTCCCGTTGGTGTACCTCAGCATGATGGTCTTCGGAGAG
CTCCTAAGAGTGTCCCAGGAAGAGTTTGGTTTCGCAAGCAATGGAAAGATCACACTGCCTTGTGATGCCGCAGTGATGG-
AGTATG----TCATGTGCTTGCTCAGCAGAGATGCCTCTGCTGAGGTCGAGAAGGCATTGCTGAGTTCTATGGTGATATC
TTGCCACTACACTGTTTCTGTGATGCCAACTGTTGGAGACAGCCAGAAAAATTGCTGTTCGTAACCGCTGAAAAACATGC
GTGC-----CCCTAATGTTGTCTTCTGCTTGTTGTAGTTTATACCTGGATAGTGTAAGAGAGTTAGATAATAGGCAATAG
GAAAAGGAAATTGTTATGTAAAGCTTTTTTATCATGCAAGCAACCAAGCAG-----------------------------
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>chr5A_577
--------------------------------------------------------------------------------
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---------------------------TGCTACCACTATTGGCTCCAGCATGCCCCAAACATTTGGCCCCATCACAATCT
ACTCCAAAGTGATC--ATGCTGCAACACTGCATGCGCTGATCACATGGCCTTG------TCCCTGGCCAACTCTTCACAG
TGACAACTACTCTTCACCAG----CACAATGCCCTT--------CACCTTGCCTATAAATTCAGGGAGCGGCTAAGCTCA
ATACCATCACTTCATCAGCTCACCCACCACCAACTGAGCACTACAACACCCATAGCTCACTTTCTCTGGAGCTGA----A
AAAATAAGACCCAG----AACCAACCATGATTAGCATGAAGAGACTTGCTCAACTGGCAAAGAAGTGGCAGAGGGTGGCG
GCACTTGGGAGGAAGAGGCT---CACAGTGACA---GCCAAAGAAGATGAAGAATGCTGCACCTCTGGAGTGGTA-AAGG
GCCACTGCATCATGTACACGACCGACGGAAGCCGTTTCGAGGTCCCGTTGGTGTACCTCAGCATGATGGTCTTCGGAGAG
CTCCTAAGAGTGTCCCAGGAAGAGTTTGGTTTCGCAAGCAATGGAAAGATCACACTGCCTTGTGATGCCGCAGTGATGG-
AGTATG----TCATGTGCTTGCTCAGCAGAGATGCCTCTGCCGAGGTTGAGAAGGCATTGCTGAGTTCTATGGTGATATC
TTGCCACTACACTGTTTCTGTGATGCCAACTGTTGGAGCCAGCCAGCAAATTTGCTGTTCGTAACCCCTGAAAAACATGT
GTGCAGAGACCCTAATGTTGTCTTCTGCTTGTTGTAGTTAATACCTGGATAGTGTAAGAGAGTTAGATAATAGGCAATAG
GAAAAGGAAATTGTTATGCAAAGCTTTTTGATCATGCAAGCAAGCAAGCAG-----------------------------
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>chr5B_604
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------------------------------------------------------CCAAACATTTGGCCCCATCACAATCT
AATCCAAACTAATCATATGCTGCAACACTGCATGTGCTGATCCCATGGCCTTG------TCCCTTGCCAACTCTTCTCAA
TGACAGCTGCACTTCACCATGCATCACCATGCCCTTCCCCTCGCCACCTTGTCTATAAATTCAGTAAGCTGCTG-GCTCA
ATATCATCACTTCATCAGCTCATCCACCAACTGAGAGTTGCGACA--------AGCTCACTCCTTCAAGTTCTCACA---
-----AAGACAGAG----AGCCAACCATGGCCGGTGCCAAGAGACTTTCTCAACTGGCAAAGAAGTGGCAGAGGGTGGAA
GCACTCGGGAGGAAGAGGCT---CACAGGGTCA---GCCAAAGAGGATCAAGACTGCTGCAGTTTTGTACCAGCC-AAGG
GCCACTGTGTCATTTACACGGCCGACGGGACGCGTTTCGAGGTGCCCTTGGTGTACCTCAGCACCACGGTCTTCAGCGAG
CTCCTGAGGATATCTCAGGAGGAGTTTGGCTTTGCAAACAAAGGCAAGATCACACTGCCTTGTGATGCTGCAGTGATGG-
AGTATG----TCATGTGCTTGCTCAGGAGAAATGCCTCCATCGAGGTCGAGAGTGCATTGCTCAGCTCTATGGTGACGTC
TTGCCACTACACTGGCTGCGCCATGCCTACTGTTGGAGCCAGCCAACAGATTTGCTGTTTGTAGCTTCTGAAGAAGATGC
ATGAAGAAGCCCTGGCGATGTATTTTTTCTTGTTTAGTTTG--CCTGGATAGTGTAAGATAGTTAGATAACAGACAATAG
GAGCAGGAAAATTGTATGTATAGCAATCTGATCATTAAAGCAACAAAGCAGTACTCTGGGCATTCTTCTCTTAAATTTTA
GTTTCATACAACTCTACAATGGACCAAAAATGGTTGTGACTCTACTTTTAGATGTCGATAGTTTCATCCTGCTGCACAGA
GAATACGCAACAAGTCTCCATACAATCTATCATCTAGGCCTCTGGAAAATAAATACAGTACCATCAACAAAATAAGTAGG
TAAAAATTACAAAATGGAATAGAAACCAGGGTTTGCTCTACAAGTATTTAGGGGTATAAGGCAGATCTATTTTTGGGGGT
AAAAAGAGTGATAGTTAACTGTTACTGAAAAGCTGAATGTTCTACCCACAAAACTTTACAGAAGGTAATGTCGGTGCAAG
ATATAGATGCCAGTTATTCACTTCACAAATGCAGCTGGTTCAAGGTCCAAAGGAAAGTGCAGAGAAGGAGCTACGGAATG
GCTTCTTCATGCAATGGTAGATCATCAACAGAACTCAGTGATGACACTGTTCAGCAAGTTATGTGTGTTGCATCAATTAA
CACAGTCCCTTTCACACCTAATCAAAATGTTAAAAACACGCTAAAGTACAATCATATAGATCCAAGTAAGTTTCTCACCT
GCTAAAGGAAGACTATAACTCTGAATTTAGTCCAAATACTTGTGTTTGAGAAACCCAACTACTAACTGGAAACGACACAT
TGAAATTGTTATGAATACAAACGGAACCCAAGATGCATCAGCGACATGTGCTTTCAGCTTAAAAATCAAACATATCATGT
GCTAGACCGAAGCAAATTTTTCAACTCGATGTCAACAGAGAATAGATTGATCAGGTGCATGAACAATGCACGTAAGAAAG
CACATAGATGGTGCAAGTGAGTGCTCACCGTCGCCGAAATTGATCAATCCCTGAATCTGGAACCCATCGCTGTCCCCTCC
CCACAAGTTGCCAATGCCATGTTCCCGACACGCCTCTTGTTCGCTACGCGCCTACATGGTTTGGTATGGCAGCCACGAAT
GATAAGAAAGCCAACAAATGTCTACCCAGTTACGACTATAGGCTCCAGCATACACCAAACATTTGGCCCCACCACAATCT
AATCCAAATCAATCATGTTGTGACATTGCATGCCCTGATCCCATGGCCTTGTCCCCTGCCAGCTATTCTCGCCTTTCCCC
TCGCCTATAAATTCAGCATGCGGCGAGCTCAACGCCATCACTTATTCATCAGCACAACCACCACCAACTGAGCATTGCAA
CATCCATCCCACTTCTTCAGATTTCCAGCTGAAAACACAAAGGCCAAGAAACCAACCATGGTCAGCGCCAAGAGACTTTC
TCAACTGGCAAAGAAGTGGCAGAGGGTGGAAGCACTCGGGAGGAAGAGGCTCACCGTTTCAGCCAAAATAGATCAAGACT
GCTGCAGTTCTGTACCACCCAAGGGTCGCTGTGTCATGTACACGAGTGACGGGAGGCGTTTCGAAGTACTGTTGGAGTAC
CTCAGCATGACGGTGTTCAGCGAGCTCCTCAGGATATCGCAGGAGGAGTTTGGTTTTAGAAGCGATGGCAAGATCACATT
GCCTTGTGATGCGGCAGTGATGGAGTATGTCATGTGCTTGCTCAGGAGAAATGCATCTGCCGAGGTCAAGAGTGCATTGC
TGAGCTCCATGGTGACGCCTTGCCACTACACTGGCTGTGCGATTCCTACTGTCGGAGCCAGCCAGCAGATTTGCTGTCTG
TAGCTTCTCAAGAACATGCATGCAGAGGCCCTGATGATGTCCTCTGTTTTGAGTACTTTGCCTGGGTAGTGTAAGATAG-
---TTAGACAGTAGATAATAGGAGCAGGAAAATTG-TATGTATAGCAATCTGATCATCAATGCAACAAAGCAGCA-----
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>chr5D_665
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-------------------------------------TGATCACATGGCCTTG------TCCCTGGCCAACTCTTCACAG
TGACAACTACTCTTCACCAG----CACAATGCCCTT--------CACCTTGCCTATAAATTCAGGGAGCGGCAAAGCTCA
ATACCATCACTTCATCAGCTAATCCACCACCAACTGAGCACTACAACACCCATAGCTCACTTTCTCTGGAGCTGA----A
AATACAAGACCCAG----AACCAACCATGATTAGCACGAAGAGACTTGCTCAACTGGCAAAGAAGTAGCAGAGGGTGGCG
GCACTTGGGAGGAAGAGGCT---CACAGTGACA---GCCAAAGAATATGAAGAATGCTGCACCTCTGGAGTGGTA-AGGG
GCCACTGCATCATGTACACGGCCGACAGAAGCCGTTTCGAGGTCCCGTTGGTGTACCTCAGCACGATGGTCTTTGGAGAG
CTCCTAAGAGTGTCCCAGGAAGAGTTTGGTTTCGCAAGCAATGGAAAGATCACACTGCCTTGTGATGCCGCAGTGATGG-
AGTATG----TCATGTGCTTGCTCAGCAGAGATGCCTCTGCCGAGGTCGAGAAGGCATTGCTGAGTTCTATGGTGATATC
TTGCCACTACATTGTTTCTGTGATGCCAACTGTTGGAGACAGCCAGAAAATTTGCTTTTCGTAACCGCTGAAAAACATGC
GTGCAGAGACCCTAATGTTGTTTTCTGCTTGTTGTAGTTTATACCTGGATAGTGTAAGAGAGTTAGATAATAGGCAATAG
GAAAAGGAAATTGTTATGTAAAGCTTTTTGATCATGCAAGCAACCAAGCAG-----------------------------
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>SNPs
--------------------------------S-----------------------------------------------
---------S----------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------------------------------------------------------S------SS----------
------------------------------------------------------S-------------------------
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--------------------------------------------------S-----------------------------
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------------------------------------------------------------------S-------------
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---------------------------------------------------------------------------S----
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----------------------------------------------------------S---------------------
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---------------------------------------------------------------------S----------
-----------------S--------------------------------------------------------------
------S-------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
----------------SS------------------------------------------------S-------------
-----------------------------------------S--------------------------------------
---------------------------------------------S--S-----------S-------------------
--------S-----------------------------------------------------------------------
--------S-----------------S--------S---S-S-------------S----------
>forward_611
--------------------------------------------------------------------------------
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-------------------------------ACCGCTATTGGATCCAGCAC-----------------------------
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>reverse_4209
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------------------------------------------------ACACAGGGCACACCTTGATAG-----------
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------------------------------------------------------------------
