>input_sequence_84716
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-------------------------------ATGAAGTACATGGGGCAGCTGGTGGTGGCGCTCCTGGCCTTCTGGGCGG
TGGTGCTGATGATGGCGCCGGCCGGCGTGGACGCGGCGACGTGTGACGCGCTGCAGCTGAGCCCGTGTGCGGGCGCGATC
GTCGGGAATGCGGCGCCGACGGCGGTGTGCTGCAGCAGGATGAAGGCGCAGAGGCCGTGCATGTGCCAGTACGCGCACGA
CCCTAACCTGAAGCAGTACGTCAACTCCCCCAACGGCAAGAAGGTCCTGGCCGCCTGCAAGGTGCCCGTGCCATCATGCT
AG------------------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G374300
ATGAGCACCTGTCAACACATTGCCTGGCTTAAGGTGGCCCCAAATGTGATGCGTGGGTAGCTAAATAATAGGAACCGAGG
AAGTGCCATTGCCACTAACCGAAAGGTCGTTGGCTAAATGGAATGGAGCAATTGATCTACGTCGCCCTTTACACTTTCTC
TCTATTATCACATATGAACACGG--------------------------TGGGCACTAGCCCGTCGGTGATGGTGAGTAG
AGTTTCTCTATACTTCGTCTTAAAGGTGGCATAATACCGTAAAT-GGATGGGGTGTGTA---GTGTAAAGTGAGTTAACT
CATAGGTCAAGGAAAAGGGTCGAAGGTCTGCTTTCAGGTCTGATCAAATGCTCTGAAGATAGATACTGAACTAGACATAC
AGGTGTACCACTCCAGTC-------------------------AAAA-CCTGAATACCTTTTAAATCTACATTCAACTCT
TTACGAAATGTTTTATGTTTCTTTGGCTTCGTCAATAAAATGGAAAAACTAGTTAT-GCTCAACTTTTTTGCTGTTCTTT
AACCAGTTAACAAATGTGACATGCAGCACAGCTTAACAAACCTTATCATGGCCGGGCATGCAGTCCACCAACCCTGCTTT
TTTCTCTGGGTTGTGACACTTGTAGTTTCAGAGGCAGTGCGCGTGGCTTTGTTGTGCTAGTAATTGAGTTGCTTTTCAGT
GCGTGCGCCGACTAAACTTGCCAATCCTATGCACTTTCAGATCTCC-TTTTTTCGTAGTGCGTGGACCATTAATTTCTGC
TTCATCGTCATCATGTCTTCCATGAACGCAATGTGATGTGCCGCTGAGGAAAAGGCACATCGTTGCACACTTGTACTGCA
GT-----AGCCGTGGCCATTTGGCCCGTGC-------CTGAACTCTCTTGATCGAAATTCGAAAGCCTATAAATACCACT
GATCTCACCCCCAGACACTCACACCATCCAAAGCCATCTTTGCAC-AAGCCACTAGCTCACTACTCGCTACCAGTCGATC
TACATTTCTTCGTCAGAGTTTCAGAGACGTCATGAAGTACATGGGGCAGCTGGTGGTGGCGCTCCTGGCCTTCTGGGCGG
TGGTGCTGATGATGGCGCCGGCCGGCGTGGACGCGGCGACGTGTGACGCGCTGCAGCTGAGCCCGTGTGCGGGCGCGATC
GTCGGGAATGCGGCGCCGACGGCGGTGTGCTGCAGCAGGATGAAGGCGCAGAGGCCGTGCATGTGCCAGTACGCGCACGA
CCCTAACCTGAAGCAGTACGTCAACTCCCCCAACGGCAAGAAGGTCCTGGCCGCCTGCAAGGTGCCCGTGCCATCATGCT
AGATCGACGT-------CTATGATCGAGACGAGAACGAGAGCCCAGCCAGTGGCATCTCTCTGCAC------CGCTGCAT
GTGCTGCATGTGTTGATGTGTGAGTGTTT-GGTTGTCGTGAGTAGCAACCCCGATGTATCTGTATCTGAAATTCTGAATA
AATGCAG----------------------------------------------TGCTTGCGTGAGCTCCACTAGGTAAGA
GATT----GGCGTTGATGGGAGAAAGAACTGTTCGTTCAAACGGCCGGTCATCATATGTGGCATATGTTTTTCTCGAACG
GGCATGTGATGAGCTCATTTTTTAAGACAAATATAAAAGGATAAGCGCGGCCTCTGCATCATTACGATGCATATAACTAC
ATTTATTAAAACATAAGTATCATCATTCAGTACATAACAAAAGTAGATACTACCACAAACGACGAAAAATTAGAAAATAT
ATCTACACGCATATTCCATAATCGAACCAC--------------------------------------------------
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-------ACTACCTTATCACCTCCGTTTTTGCCAAATTACCCTTCATTAGGATAACCCTCCATATGCATGAACCACACTA
AAATGTTATCTTAAATGACACTTTGTTTTTTCAAGTATATCTCAAAAAAAAATACAAATCTCATATTTATGAGGTCCGTA
TACATCGATTTAACTAAGAAAAACCCTAGAAAAGGTCAGCCGCCAATGGAAAGAATCTTGTTCGCTAGTTAAACTACCCA
TCATCAGCCTACGCACTAAATTTACCGGGCAAAAAAAAACCTAGGCACTAAATCGAGCCAAGCA----------------
-------------------------------------GCTCGTGTGAACTGGATATTCAAGGGAATAGTCCCCAATATTG
TACCCACAAAAATCTCCTTCCA----------------------------------------------------------
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-------------------------------------------------------------GCACGCTATTATAAAATGA
TGTGTACTATAAAGTCAAAGGTGTATATTTTAGTCAAGTATCCTCCCAAAATGTGTGCTACGACCGTCTTCAACTTGAAA
AATGCTATACTGAAGAACCCACTCTTTGTCCTCATTAACCCCTTTCAGAAGCGCGAGTAATTTGGCTGAATCGTAACTTG
AGACAAAGATTTG-------------------------------------------------------------------
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>chr1B_3
--GAGCACCTGTCAAAACATTGCCTGGCTTAAGGTGTCCCTAAATGTGATGCGTGGGTAGCTAAATAATAGGAACCGAGG
AAGTGCCATTCCCACTAACCGAAAGGTCGTTGGCTTAATGAAATGGAGCAATTGGTCTATGTCGCCCTTTACACTTTCTC
TCTATTATCACATATGAACACGTCTATTTGCTGGTGAGAAAGGACACACTGGGCAGCAGCCCGTCAGTGAGGGTGAGTAG
AGTTTCTCTATACTTCGTCTTAAAGGTGGCATAATACCGAAAAATGGAAGGGGGTGTGTAGTGTGTACAGTGAGTTAACT
CATAGGTCAAGGAAAAGGGTCGAAGGTCTGTTTTCAGGGCTGACCAAATGCTCTGAAGATAGATACTGAACTAGACATAC
AGGTGTATCATTCCACTC-------------------------AAAAACCTGAATACATTTTAACTCTACACTCAACTCT
TTACCAAATGTTTTATGTTTCATTCTCTTTGTAAAAATAC-A-ATAAACTAGTTAA-GCTCGACCTTTCCGCTGTTCTTT
AACCAGTTAACAAATGTGACATGCAGCACAGCTTAACAAACCTTATCATG----GGCATGCAGTCCACCAAACCTGCTTT
TTCCTCTGGGTTGTGACACTTGTAGTTTCAGAGGTAGTGCGCGTGGCCTTGTTGTGCTAGTAATTGAGTTGCTTT-CAGT
GCGTGCGTCGACTAAACTTGCCAATCCTCTGCACTTTCAGTTCTCCTTTTTTTCATAGTGCGTGGACCATTAATTTCTGC
CCCATCATCATCATGTCTTCCATGAACGCAATGTGATATGCCCCTGAGGAAAAGGCACATCGTTGCACACTAGTACTGCA
G-----CAGCCGTGGCCATTTGGCCCGTGTCTGAAGTCTGAACTCTCTTAATCAAAATTCAAAAGCCTATAAATACCACT
GATCTCATCCCCAAACACCCACACCATCCAAAGCCATCTTTGCAC-AAGCCACTAGCTCACTACTCACTACCAGTCGATC
TACATTTCATCGTCAGAGTTTCAGAGACGCCATGAAGTACATGGGGCAGCTGGTGGTGGCGCTCCTGGCCTTCTCGGCGG
TGGTGCTGATGATGGCACCGGCGGGCGCGGAGGCCGCGACGTGCGACGCGCTGCAGCTGAGCCCGTGCGCGGGCGCGATC
GTCGGGAACGCGGCGCCGACGGCGGTGTGCTGCAGCAGGATGAAGGCGCAGAGGCCGTGCATGTGCCAGTACGCGCGCGA
CCCCAACCTCAAGCAGTACGTCAACTCCCCCAACGGCAAGAAGGTCCTGGCCGCCTGCAAGGTGCCCGTGCCATCCTGCT
AAATCGACGTCTATGAACTATGATAGGAG---ACGAGATAGCCCAGTCAGTGGCATAATATCTCCCTGCAC---------
--GCTGCAGGTGTTGATATGGGAGTGTTT-GGTTGCCGTGTGCAGTTACCCCGATGTATCTGTATCTGAAATTCTGAATA
AATGCAGTAATAATTATGTATGTTGTTGGTCATCGTGCGTTATGTTCGGATGGTGCTTGTGTGAGCTCCACTAGGTAAGA
GATG----GGCCTTGATGGGAGAAAGAACTGTTCGTTCAAACGGCCGGTCATCATATATGGCATATGTTTTTCCCGAACA
GGCATGTGACATATAACTCATGTTTTTTTTAGATAAAAGGATAAGCTCGGCCTCTGCATCATTACGATGCATATAATTAT
ATTTATTAAAACATACATATCATCATTCGGTACACTACAAAATTAGATAAAGCCACGAACAACAAAAAATTAGAAAATAT
ATCTACACACATATTTTATTATTGGACCACCATCAAAACTGGTTGAATGTTTCATGTCCTACCATCTTTCATCGATTGCA
CCCAATGCT-----------------ATAAGCTCCAGCGCTTTCACATGCTGAATGAAGGACTACATACAAATCCATCAT
GAAGCTCTGAAAGCAACCTGCAAAATTTTAAATTTTTTATTACTCTCTCGAATTATTGCAACAGTTCTAGCTTATAACAT
CCATAGTAAAGCACAAACTATCACTGAGATACGCGCCTTAACTTTAGGATTAACCCAACCAAACTAGCATGCACACAAGC
TCGTTATACTAGTAGGTGGGGGCATGTTAT-------ATGAATCGCACACCAAAGAAAGGTGGCAAACATGTAAGAGCAT
CTCCAGCCGTTGGTCCCACAGGAGGCGCTAAAAATCGCCCCCTGGAGGTGCACCGGTGCTAAACCGCACGCTGGCGGCGT
GATGCCCCCAGTCGTGGCGCCCACGTTTTTATGAAAATTTAAATTACGCCACAAACACAGCGCAAATTCAACCAAACTTC
GGCGAGTACGTTTATATTTAAAAATATTTTACAACAAAGAAAAAAAAAGCTACTAGGCTGCTCCTCGCCGTCTCCCTCGC
CGCTCCTCGCCGCCCGCCACCCGCCGCCCTTGCAGTTCTACATGCCGAGGAGGCTGTAGAACCGCGTGTAGTCGCCGCCG
TCGTCATCGTCGTCGCCGCCGCCGCCGTCCCTGCTGCAACCCTCCCCCGGTTGGCACGGCGGGTTGGACGGTCCGGGGGC
GTCCTCGTCGTCGTCGCTGTCGAGGATCACGACGTCGTGCTCGTCCTCGCGGCCACGTTTGCGGGCGGCTATCTCCTCCA
GGGCCCGGAGCTGCCGGACCATCTCGTCACGGAGGTAGTCGTCTCGCGCCCACTGTAGGGCCTCCTCGTCGGAGAAGCCG
CACCGGGCTATCTCCTCGTACTCCGCGGGGAGGCCGGGCTCCGGCTTGGGCGCGACGAGGACGAGGCGGCCAGAGGGGGG
TGGAGTCGCCGATGCGGACGCCGGAGCTGCGGGTGCGCCCGCTGACAGGCCTGTCCTGGGGCTCCGGCTTGACGGGGCGG
AGGTAGGGAGAGCCGGACGAGCGGTCGGACGAGGAGGAGGACGCCCCGGGCTGCTCCATGCGCCTCGGAGTCCACGAGCT
CCCACGTCGGCGAGAGAAGGACGGGGGAGCGGGGTACTCGAGCCTCGGCGTGTTGCCGCCCTCGATGTACTCGAGGACGG
CCTCCAGCGTGCGCCCAGGCACGCCCCACCATCGGCGCCACCCCTCGGAGTTGAGCCTTCCGGAGGGCACGACACCGTTC
GTGGCCTCGAGTTGTTCGGCATGGCGGCGGCGGAAGTATGGCTCACAGAGCGGGCTGTCGGGGACGTACCGGGGTCCTTC
CCTCGCGGCCCATGGCAGGGAGGCGCGGATATGCGCGATCTCCGCATGCCACGCCGCCCCGGTGGGCGGTGGTGGCACCG
GGACCCCACAAGCGCTGATTCTCCACGCCCCGGGCACCCGCATGTCCGGAGGGACCGGGTACTCGGCCTTGAAGAGGAGC
CGAGCTTCATCCTCGTGAAGGTGGCGGCGGCCGAAGCCGTTCGCCGCCGCGCCGTCGCCTGGGAAGCGCTCGGCCATGCT
TTGAACTGGAGACGGCGAGAGGAGAGAGAGGAAGGGGAGAAATGGCGCGTCGGCAGTGGAGGCTCTGTGCGTGTCTCCTG
CGCGCTGGGGTCGACTTATATAGGCGAAGGCGCCGCGTACGCGTGGCCGCCGCGTGTACGCGTGGCGGGCGAGGGGACGC
GGGTCGTCCGGTCTTCACTGCGCCGCCCGTGAGGCATCAATGGAGGTTGACCAGCGCGGCAGCGCGCGGCAGCTTTGGCA
TTGATTCGCCGCGGGAAACGAGGCGATGAGGACGACGAAGCGGCGAGAAGAGAGACGAGTCACTGGCAAGGAAGGCCCGC
AGCTCTTTCGCGCCAAAAACGATTCGCCCGGCGCCCCCCAGCGCGCCGGGTTCGGGTTGGGTCCGCCGGCGCCAATTTCG
GCTCGAGCCAGTGAAAACTGGGCCCTTGGGGGCGCGACTGGGCCGATTTTTTGGCGCCGGCAGCCAAAAAGTCGCCTGGG
GGGCCTTGTTGGGGGCGCGGCTGGAGATGTTCTAAGAGATAAAAGGTGGTTATTTGTTTCATCTTGGTCACAGAAACAAC
ATTATTTACTACCTTATCACCTCCGTTTTTGCCAAATTACCCTTCATTGGGATGACCCTCCGTATGCATGAACCACACTA
AAATGTTGTCTTAAATGACACTTTGTTTTCTCAAGTATGTTTCAAAC-AAATTACAAACCTTGTATTTACGAGGTCCGTA
TACATCGATTTAACCGAGAAAAATCCTAGAAAAGGTCAGCTGCCAAT-GAAAGAATCTTGTTCGCTAGTTAAACTAAGCA
TCATCAACACAT--------------------------------GCACTAAATCGAGCCAAGCACCCACGCAAAATATAA
AAAATCGAGCCAAGCAGTCCATTTGTCCCTTACCAGAGCTCGTGTGAATTGGATATTCAAGGAAGTTGTCCCTAATATTG
TACCCACAAAAATCTATTTCTGTTAGAATAAATTCGAGGCATACCGTCGATCATCCAAGGACCAAGTAATCACACGAGCA
CGACACCGAGATTTGTTAACGAGGTTCATCGATATGGCTACATCCCCGGGGCTCGACTACGGGCGCTCCTCCCCGTGACA
CCGTCACAATACCGCACACCGGCCACCCGGGCGCCGGCACAAGCCGTCGGCTCCCCCTTGCGCGTCTGTGCTATTATGTT
GGTATAGGTTACATCGTGTGTCTATCCCCGCTATATAAGAGAGGCCTAGGATACAAGTGTCCTACTAGGACACGACTCCA
TATCCTATGTAAACACAATACAACTCATAGTCCAACTGTAACCTACCTTGTACACAATATTCGACACAACTCTAACAAAC
TCCACCTTGGCGAATATTTTCCACCACCATGAATTCGTCAATGCGTCAAACTTCCATGTACATTGGACTTGAGCTTATCC
CGTGAGTACCGCTGCTACTCCAAAGACTCCATGTGACTCCACCTGCAACTTGTAGTCCCTTCTTTTCTTGATCACGGTCA
ACACTCGAGCATAATTAAATTCCTTGTTACTCTAGTTCGTGCTCCCAACTTTCAGAGTATCCGTCAACGCCATCACACAC
CGATCACTGACCTGCGTGAAAGTGAACAACTCACATATTGGATGTCACGCATAAGAGTTACCTGAACTCAACATCACCGC
TCCTTTCTTGACCGCCTGTCTGAAACTTGAAAAAATTCACCGTTGCTTGTAGTCATCCCAAGTCAAATTCGCAGTTGTCT
CACCACATGTATGACCACCAGAGCCCTGGCCCGTCTCCATGTCCCGTGCATACCGCACGCATCGCCGCTATTACTGCGTC
GAGCCTCCGCTGTCCCGGTCGAGTCTCAAGGGTCGCGAGACCACACCACTCAACCCCCACTGCAGAGTACCACCGGTCAT
CACCGACCGATGACGAGTTTCACGCTTCCATCAGACCACTGGGCTCCAGTCCGAACTACGTGCCACTCGCTTTTCCCATC
CACTGAATAGGCTTCGATTCTCTGGATCCTTACACCGTAGCCCCTCAATCAAGCTCCACCTTCAACATGACTCCATGGTA
GATGATCAGTCCACCCTCGCGTCCCGTCGACTTCAAGCTCACATGTGCACCGTCTTGAATCAACCCCATGCCATAGTCTT
GTCGAAGCCACACAAGCCTCGGGCCTGCGTCACGTGTTTCCACGCCCAGAAGTCGGTCACCATCAGCATCACGCTCCTAC
GTCGTCGTCGCCGATTCCACCACCGTCTTCTGTACCAACCGACTTGCGTCGATCCGTCAGACTGCCTAGTCCGACCCAGT
CGAACTCGTTCGACTGTATGACACGCTCATGGCTCTCAAATCGTCTTCCACGAAATTTCCATCCATTCAGACATAATTCC
ATCTTAGCTGACAAGACTTCCCGCAACGCCCTCAAGCATCCCTTTTGTGCCAACAAATCTTCCACCATTGTCTGTCATAA
CTCAAGATTTTCTGTTCCGTGAACTTCTCCACCTCAAACCCGATGTCCGATGACATCATGATTCTTCGTACAACTGACGC
TGCCAAAAATTATCCGAGCTTTCCTCTCATGTGATGCCCAAGTACACAAGCAAATCTGTACTACTAGCAAATTCCAACCA
AAACTTATTTGGCCTTCACGTGATGGCTCGGCTCCTTGCACAAAACTCCGATGCTAGCTTTGCTTTGCCTTGTCCTAAGC
CTTCCCGATGGATTCGTATCATGTATCAATGGATTTCATCTTTCCGGCGATTGATGCCTGCCTATCTCTGTGTCACGTGG
AGACTCGGTCTCCCTTCTTGGTCCAAACAAATCCCGTGTCCAGCTCCTGCCGCTCATGGAACTCTCCAACACATGCAACG
CGCACGCTCCAGGCGTCGTTGCCTCTGAAGAATCCTGTCGCTGCACGCTGCATGACGCCGCTGCCGTTGTGTTCCCTTGA
TCGCCACATCTCCTGCCCACTCGCCGAGACCGATTCGATCTGGGACGCCTCGATGCTTACGGCCGCTTGCTGCTCCGATT
GCTACTTACGCCGTCCGAATAGTTCTCGTTGCCACCGTTCCGATCCGATCAGTTTCAACTTCACAACCGTGATCTTTCGG
CTTCGCTTCCTCTAGATCAACCACCACAGCCTCCTTTAAACCTTGCTCATGATACCACTTGTTAGAATAAATTCGAGGCA
TACCGTCGATCATTCAAGGACCAAGCAATCACACGAGCACGACACCGAGATTTGTTAACAAGGTTCACCGATATGGCTAC
ATCCCCGGGGCTCGACTACGGGCGTTCCTTCCCGTGACACCGTCACAATACCGCACACCGGCCACCCGGGCTCCGGCACA
AGCCGCCGGCTCCCCCTTGCGCGTCTGTGCTATTATGTTGGCATAGGTTACATCGTGTGTCTATCCCCGCTATATAAGAG
AGGCCTAGGATACAAGTGTCCTACTAGGACACGACTCCATATCCTATGTAAACACAATACAACTCATAGTCCAACTGTAA
CCTACCTTGTACATAATATTCGACACAACTCTAACAATTTCTGTT-----------------------------------
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-------------------------------------------------------------GCACACTATTATAAAATGA
TGTGTACTATAAAGTCAAAGGTGCATACTCTAGTCAAGTATCCTCCCAAAACGTGTGGTACGAACATCTCCAACTTGAAA
AATGCTCTATTGAAGAACACACACTTTGTCCTTATCAACCCCTTTCAGAAGTGCGAGTAATTTGGCTGAATCGTAACTTG
AGATAAAGCTTTG-------------------------------------------------------------------
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>chr1D_246
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-------------------------------TAATACTGTAAAA-GGAAGGGGGTGTGAAC------AAGTGAGTTAATT
GATGGGTCATGGAAAAGGGTCGAAGGTCTATTTCCAGGTCTGACCAAATGCTCTGAAGATAAATACTGAACTAGACATAC
AGGTGTACCATTCAAACCCTGAATACCCTTTTTTTTTGCGTGAAAAACCCTGAATACCTTTTAACTCTACACTCAACTCT
TTACCAAATGTTTTAGGTTTGCTTGGCTTTGTAAAAGAAATA-AAAAACTAGTTAGCGCTCGATCTTTTCGCTGTTCTTT
AACCAGTTAACAAATGTGTCATGCAGCACAGCTTAACAAACCTTATCATG----AGCTTGCAGTCCACCCACCTGC--TT
TTTCTCTGGGCTGTGACACTTGTAGTTTAAGAGGTAGTGCGCGTGGCCTTGTTGTGCTAATAATTGAGTTGCTTT-CAGT
GCGTGCGTCGACTAAACTTGCCAATCCTCTGCACTTTCAGATCTCCTTTTTTTCGTAGTGCGTGGACCATTAATTTCTGC
TCCATCATCATCATGTCTTCCATGAACGCAATGTGATGTGCCGCTGAGGAAAAGGCACATCGTTGCACACTTGTACTGCA
CTGCACCAGCCGTGGCCATTTGGCCCGTGTCTGAACTCTGAACTCTCTTGATCGAAATTCGAAAGCCTATAAATACCGCT
GATCTCACCCCCAAACACCCACACCATCCAAGTCCATCTTTGCAC-AAGACACTAGCTCACTAGTCACTACCAGTCGATC
TACATTTCTTCGTCAGAGTTTCAGAGACGCCATGAAGTACATGGGGCAGCTGGTGGTGGCGCTCCTGGCCTTCTCGGCGG
TGGTGCTGATGGTGGCGCCGGCTGGCGTGGACGCAGCGACGTGTGACGCGCTGCAGCTGAGCCCGTGCGCGGGCGCGATC
GTCGGGAACGCGGCGCCCACGGCGGTGTGCTGCAGCAGGATGAAGGCGCAGAGGCCGTGCATGTGCCAGTACGCGCGCGA
CCCCAACCTGAAGCAGTATGTCAACTCCCCCAACGGCAAGAAGGTCCTGGCCGCCTGCAAGGTGCCCGTGCCATCATGCT
AAACTGACGC--ATA---TATGATCGGAG---ACGAGAGAGCCCAGCCAGCAA--------CTCTCAGCAC---------
--GCTGCATGTGTTGATGTCCAAGTGTTTCGGTTGCCGTGTTTAGCTACCCCGATGTATCTGTATCTGAAATTCTGAATA
AATGCAGTAATAATAATGTGTGTTGTTTG------------ATGTTCGGATGGTGTTTGTGTGAGTTCCACTAAGGTAAG
GAGGGATGGGCGTTGATGGGAGAAAGAACTGTTCGTTCAAACGGCCGGTCATCATATATGGCATATGTTTTTCTCGAACG
GGCATGTGACATATAAACTCGTG-TTTTTTAGATAAAAGGATAAGCCCGTCCTCTGCATCATTACTATGCATATAACTAT
ATTTATTAAAACATAAGTATCATCCTTCAGTACACTACAAAAGTAGATAAAGCCACAAACGACAAAAAATTAGAAAATAT
ATCTACACACATATTCTATTATTGGACCACCATCAAAACTGGTTGAATGTATCACGTGCTACCATCTTTCATTGATTGCA
CCCGTAAAAAAAAACACCCAAGTGCAATAAGCTCCAGCGCTTTCGCATGCTGAATTAAGGACTACGTACAGATCCCTCGT
GAAGATATGAAAGCAACCTGTAATTCTTTTTG-TTTTTATTACTCTCTACAATTATTACAACAGTTC-----TATAACGT
CAACAGTAAAGCACAAACTATCACTGAGATATCGA-CTTAACTTTAGGATTAACCCAACCAAACTAGCTTGCAAATAAGT
TTGTTATACTAGTCGCTGGAGGCATGTTGAATGCTACATGAATCGCACACCAAAGAAGGGTGGCAGACATGTAAGAGATA
AAAGACAGTG----------------------------------------------------------------------
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---------------------------------------------------ATTCGTTTCATCTTGGTCACATAAACAAC
ACTATTTACTACTATATCACCTCCGTTTTTGCCAAATTGTCCTTCATTAGGATAACCCTCCATATGCATGAACCACACTA
AAATGTTGTCTTAAATGACACTTTGTTTTTTCAAGTACGTTTCGAAC-AAATTACAAATCTCCTATTTATGAGGTCCGTA
TACATCGATTTAACAGAGAAAAATCCTAGAAAAGGTCAGCTGCCAATGGAAAGAATCTTGTTCGCTAGTTAAACTAAGCA
TCATCGACCTACGCACT---------------------------------------------------------------
-AAATCGAGCCAAGCAGTCCATTTGTCCTTTACGGGAACTCGTGTGAACTGGATTATCAAGGGAGTTCATTTCTTCTCTT
TCTTCCTTCAGCATTTTCTACGTAGAATGCTATGATATTTCATTGATTCTATGATTGTGGATTCGTTTCT----------
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-----------ATTCAGATCATGTATCAATTTTTCCCTGTAAATTCTGTTCATTTCCTTATTTGCTTTTTTATTTGAAGC
AAATGTCTCCATCAAATCTTTGTGATTCTCATTCTTCTACATGGATCCCAACAAGACCCTTTGTGACACTAAGAAGGCTA
AGGTAATTTTGTTTACATCATTTGTGCTCGGTTTGTACCGTATAGGGCATGTCTGCTTCATAGGAATATGAAGTTTTACT
ATGATGACAATTCATCTGTTTGATTCAAATGAATGGACCATAGAAAAATTACATGAATGATTCCTTTGGATTGAGTTTCA
TAATAAAATATAAGAAATTTAACA--------------------------------------------------------
------------------ATCGACCACAACCTCTGCTTTACATTTTTCATTCACAAAGAACGAGATAAAGGCCACAAGTA
ACGTAATGTCAACTCCATCTTATCTTTGCATATAGTTTAACCTCAATTTGACCATGTATTTTAGGATTCCCACATTTTTC
CTATTCCTGTGAATCAAACAACCACTTCTTAACATTCTTGTGTTTTCACAATCATCTGTTTTGCACATGTCAATCAGGAA
AGAAAGCCAGGAGGATGGACTAATGATGGACCATCTAGAAGCAAGCGCCGTCAGAATTTAGACAATGAGGTAAATTTACC
TTCTGGTCTCTCCTTTCTCTTATGTTTGCTCTGGCGCCTGGCCTTTGAGCTATGGCCCTACTATGCTATGCTCCAGCCAC
CGAGCCAACGATCTAGTGCTTGTGTTTGCTGTGGGACATATCTGATAATTTCTCATGTGGATATGATAGTTGGTAATTGG
TTATTTGGTTACTAGTATTTCGTGCTGAATGTGTTGAGTTTTATTTGATGCTCTTAGTACTCCGTACTAGGTTCTGTTGG
TATTTACACATACAAATTTAGAGCTGGGCATTTGTCATTTGCAGATCTTGTAATGGTATGTACTGATGTGGGGATTAGTC
TAATTTTGATTCTATACTTGAGCTTAAGTGCAATCATATTACCAGGACACTTCTCTCTCATTGTCATATTTGATTTTGAA
ACCAAGGAAATTTTAATAGGTTGGACTCGATGAATTGTTTTGGTTGAAATCGCCAGCAAGCACACCTTAAGATTTTTTTG
TTTGTTTTGGATCCCATGCTACAAAGGAAACAATATTTAAGAAAAATTTCTAAAATTTTGAATTATGCACAATTCCTTGA
CCTAAAATCACTCAAAATGTGACGGTTTAATTGTGGAAATGATGACCCATGCTTACACTTACCCATACTGCCTCAAGCCC
TGGACACTCCATGAACCAGGAGGCTCGATCGATCTCTTCCTTAATCATCACAGTCCAAAAACAATATGACCAGTGCACCG
ACGCGCCCCTCTACGTGTAACTCAGCAGCGCACACAGCCGAGACTTTCCTTGATCGTTTCGGCACGCTCATGAATCATGA
TGGGTTCCACTGACCCACTGAGACATCAGTCTGGCCATGTTCACATAGTAAAAAGCGCAACACGTCACATCAGTCTGGCC
ATGTCCGTACCGTCCGATGCGCCACGCGCCGTCTCGATCGGCTGCTAGTGGAGCTCTGTGTCTGCGCGCACCCATGCTTG
ATGCTTCCGCGTTGCACACCTACTACTACTACGTGCCGCAGACGGCCTATAAGACGCACCGTCGACCAGCCCATTCTCCA
CAACCCAGGCACCAGCCAGCTCCTCACCTACGCACAGTCTCACAGACACTGCGCGAGAGCAGCTTCACTACTTCCCTCCC
ATCCGAGCCCAAGAAGCAACAATGGTGGCGTCGAAGGCCACCATCGTCTGCTTCATGGTCGTGACCCTCGCAGCGGCGCT
GCTGGCGGCGCCGGGCGTGGTGGAGGCGGTGACGTGCAGCCCGACGCAGCTGACCCCGTGCGCGCCGGCCATCATCGGGA
ACGCGGCGCCGAGCGCGGCGTGCTGCGGGAAGCTGAAGGCGCACCCGGCGAGCTGCCTGTGCAAGTACAAGAAGGACCCC
AACCTGCAGCGCTACGTCAACTCCCCCAACGGCAAGAAGGTCTTCGCCGCATGCAAGGTCCGCCTGCCA
>chr1A_869
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----------------------------------------------------------TCGAGAGCCTATAAATACCACC
CATCTCACCACAAACGCTCACATCCATCTGAAGCCATACTTGCAG-AAGCCACTAGCTCACTACT-------AGTCGATC
AATCTGTTGTTTCAG-------AAAGACGCCATGAAGTACTTGGGGCAGGTGGTGGTGGCGCTCCTGGCCTTCTCGGCGG
TGGTGCTGATGGTGGCGCCGGCGGGCGCGGAGGCGGCGACCTGCAACGCGCTGCAGCTGACCCCGTGCGCGGGGGCCATC
ATCGGGAGCGCGGCGCCCACGGCGTCGTGCTGCAGCAAGATGAAGGAGCAGCAGCCGTGCATGTGCCAGTACGCGCGCGA
CCCCAACCTGAAGCAGTACGTCGACTCCCCCAACGGCAAGAAGGTCATGGCCGCCTGCAAGGTGCCCGTGCCATCATGCT
AGATCGACGC--ATA---TATGATCGATCCACACGAGAGAGCCCAGCGCGCACGCGCTCCTCTCTGGCCTCTCGCTGCAT
GTTTCATGTGTGTTGATGTGTCAGTGTTT-GCTTGT--------------------------------------------
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>chr1B_869
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----------------------------------------------------------TCGCAAGCCTATAAATACCACT
CATCTCACCCCAAACGCTCACACCCATCTGAAGCCATACTTGCTCAAAGCCAGTAGCTCACTACT-------AGTCGATC
AATCTGTTGTTTCAG-------AGAGACGCCATGAAGTACTTGGCCCAGCTGGTGGTGGCGCTCCTGGCCTTCTCGGCGG
TGGTGCTGATGGTGGCGCCGGCGGGCGCGGAGGGGGCGACCTGCAACGCGCTGCAGCTGACCCCGTGCGCGGGGGCCATC
GTCGGGAACGCGGCGCCCACGGCGTCGTGCTGCAGCAAGATGAAGGAGCAGCAGCCGTGCATGTGCCAGTACGCGCGCGA
CCCCAACCTGAAGCAGTACGTCGACTCCCCCAACGGCAAGAAGGTCATGGCCGCCTGCAAGGTGCCCGTGCCATCCTGCT
AAACCGACGC--ATA---TATGATGGATCCACACGAGTGAGCCCAGCGCGCACGCGCGCCTCTCTGGCCTCTCGCTGCAT
GTTTCGTGTGTGTTGATGTGTCAGTGTTT-GCTTGT--------------------------------------------
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>chr1B_869
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----------------------------------------------------------TCGAAAGCCTATAAATAGCACT
CATCTCACCCCAAACGCTCACACCCATCTGAAGCCATACTTGCAG-TGGCCACTAGCGCACTACT-------AGTCGATC
AATCTGTTGTTTCAG-------AGAGACGCCATGAAGTACTTGGCCCAGCTGGTGGTGGCGCTCCTGGCCTTCTCGGCGG
TGGTGCTGATGGTGGCGCCGGCGGGCGCGGAGGCGGCGACCTGCGACGCGCTGCAGCTCACCCCGTGCGCGGGGGCCATC
GTCGGGAACGCGGCGCCCACGGCGTCGTGCTGCAGCAAGATGAAGGAGCAGCAGCCATGCATGTGCCAGTACGCGCGCGA
CCCCAACCTCAAGCAGTACGTCGACTCCCCCAACGGCAAGAAGGTCATGGCCGCCTGCAAGGTGCCCGTGCCCTCCTGCT
AAACCGACGC--ATGTACTATGATCGATCCACACGAGAGAGCCCAGCGCGCGCGCGC--CTCTCTGGCCTCTCGCTGCAT
GTTTCATGAGTGTTGATGTATG----------------------------------------------------------
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>SNPs
SS-------------S--------------------S---S---------------------------------------
----------S------------------------S----S-------------S----S--------------------
----------------------S--------------------------------SS--------S----S---------
-------------------------------------------S----S----SSSSS----------------------
------------------------------S------------S------------------------------------
----------S----S------------------------------------------------S------S--------
----S----------------S-------S--S--S-----SS------------S-----S--S----S----------
--------------------------------------------------SSSS--------------------------
----------------------------------S------------S---------------------------S----
-------S--------------------S---------------------------------------------------
-S----S-------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-------------S----S-----------------------------------------------S-------------
-----------------------------S--------------------------------------------S-----
----------------------S--------------------------------------------S------------
--------S-------------------------------------------------------------------S---
---S----------------------------------------------------------------------------
---------------------------SS-SSSSSS-----------------------SSSS-S---------------
----------------------------------------S-----S---------------------------------
-----------------------------------------------------------S--------------------
---S-----------------------------------------------------S----------------------
---------SSSSSSS---S---SSSSSSS-S--------------S--------------------------------S
----------------------------------SS-------------SSS-----------S----------------
--------S-------S--S--S-S-------------------------------------------------------
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-------S------------------------------S-S-----SS---S----------S-----------------
--------------SS-------S----------------S-----------------------------------SS--
------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
----------------------------------------------------------------S-S-------------
---------------SS----S----------------------------------------------------------
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-----------------------S---S-----------------------S-----------S-S--------------
------S-----------S---S------------S---------------S----------------------------
--------S-----------------------------------------------------------------------
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>forward_979
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-------------------------------------------------------------------------------T
GATCTCACCCCCAGACACT-------------------------------------------------------------
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>reverse_7812
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---------------------------------------------------TGTGTGCTACGACCGTCTTC---------
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