>input_sequence_84629
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------------ATGGCGGGGAAGCTCTACCAGCTCATGGCCAGGCTGCACCTGGCCAAGGGACGGGCGTCGGCGGACGT
GCCCAAGGGCCACTTCGCGGTCTACGTCGGCAAGCAGCGGAAGCGGTTCGTCATCCCGACGGCGTACCTGAGGCACCCGT
CCTTCCTCGTGCTGCTCAAGCGGGTGGAGGACGAGTTCGGCTTCGACCACCGCGCCGGCGGCGGCCTCACCATCCCCTGC
TCAGAGGGCTACTTCGCCGACATCGTCGGCGGCTGCTCATCCTCCTCCCCACCA---GTGGACTACCACTAG--------
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>chr7A_1_TraesCS7A01G315300
GCTGGTCAAGAACTTTGGAGAATCCGTCGCATCGCTCC-AAACGCTCATGCAAATGATGCACC-CCCATGTGTTCCTTGG
TCCATTTCCACA---------------TCCAGGCAATTTGCACACGGCCTTCAATTCTCTGGTGCAGATCGCCGGCGGAT
GGGTGGCCAATTCGCACACGCCCTTCGGTCTTGATCAATTCCGTCGACGGCCTTGCAATCATGCCGGCCGCAACTCAACC
ACTCTGCCATTCCCAAAACACAAAAATATAACGTCATGTCATTCGAATTTTACAAACAAACAAAAAAAACTGAAACACAT
TCGAATTTTACAGAAACTGGAAACCAAA-GGGC------AACCGAACCCAAAACACAAAGAA--GAGCATATATAAATAT
AATTCTTTGTTGAAAATCCTCGACAGAGAAGAGCCACAGGTCTTCGCCTCAGATCACCGGCTCGTCACCGCCACGTCGGG
ATCCGAAGTGCGTCAAGCGTGCGGT-------------------------------------------------------
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-----------------------------------GTCGCTGAGACGAGCGGCAGCCATGGCCCATGGCCGGAGCTGCAT
GCCTCTCCAAGCCTCGACCTGCTTCACCAACCTCACCTCACCGTGCGTACGAGGCACGTACAATGCACTTGTACTGCCGC
CTCTCGACACACTGGCCCGCCCATTCACGTCTCTGCAGCCAGCTATAGCACGGGGATTGATTTGATAAAATATCAATGCA
-----TGCAATGCAGATACCCACACATAGATATGGACAGTGCACTCCC-----CATGTGCCATGTCCAGCTTAGCAACAA
AGAAACCACCACACAACTTGTTGCAGCGCACGCCATGCTGCACGCTCAGCTCAGATCAGCCCGCCTCTTGATGATTACCT
CCGGTAGAGCAGAGCAGAGTATCTCCACCCCGATGCCGGAGCTATAAATACGGGGCTAGCCTCAGTTCCCACCACTCTTC
ACCATTTCTCCAGTCTTCTCGTGCAACCGAAACAACATAC------AAGCAGCTCAGTCTTGTTTGCTGGAAGCTCAGTG
GGAAGGGGATCAATGGCGGGGAAGCTCTACCAGCTCATGGCCAGGCTGCACCTGGCCAAGGGACGGGCGTCGGCGGACGT
GCCCAAGGGCCACTTCGCGGTCTACGTCGGCAAGCAGCGGAAGCGGTTCGTCATCCCGACGGCGTACCTGAGGCACCCGT
CCTTCCTCGTGCTGCTCAAGCGGGTGGAGGACGAGTTCGGCTTCGACCACCGCGCCGGCGGCGGCCTCACCATCCCCTGC
TCAGAGGGCTACTTCGCCGACATCGTCGGCGGCTGCTCATCCTCCTCCCCACCA---GTGGACTACCACTAGATATA---
TAGCAGCTCATCCGACCACACCGGCGCCGGCGCATGCATCGGCCGGTCCAGACATCGTTATGATCACTGCTGCTTAGATT
ACTACATTAGGACGGATACATTGTGTTATTAGCTGAGGATTAATTCTTCTTGGAACTTGGCATTAGTACTCATCAATGTA
CTGTTGCATTTGCTTGAACCCTGTAATC-ACTCGTCACATTAAGGGATATGAGAAAGTCTGCTGCTCTCATCTCATCACA
TTGCAATTTTCTCCAGATCGATGTTCGATGTTGGTTGCTTACAGTTTCTACCATAGGAA--CCAAAGGTTTTTCTGTTAG
GACTCTACAGTCTAGAGACGACGATACCGTAGGATACAAATACTGGCTAAGGCCTGCTTTGGTTCATAGGGTAAAAAAAT
AGTAGGAATAAGAAAGTCATAGGAAATGAGATGACATGTATCTCAAATCTTATGAGTAGGAATAGGAAAGAAGATGCCCT
TTAATTCACGTCATATGTTTTTTTCCATTGAATCTAGGCTAATGTTTATTTTCCTATGAAATATGGAGGATAAGAAGAAT
TTCTTCATAGGAATAGGATTTCATTCCTACAAACAAAAGGGTTCTAAAGGAATTTTTTCTATAGAAATCCTATCCTATGA
AATTCCTACAAGATTCCTCTAAACCAAAGGAGGCCTAAATACATTTAGTGCCACTGTGTCCGCGACTCGATTCAGAAGAC
GTGAGTTCAATTCAGGCTTTCCTCTGCCTATCAGTACCACTATTCCACCACTTTATTACACGATAT-TAGGCAGTAGATG
ATTTTCTCAGTTTTTTTTTG-CGTGGATGGTTTCCTTAACTTG-ATAGGCAGTAGATTTTCTTTTAAAAAGAAGGATTAC
CCTGGTCTCTGCATCATTTCGATGTACACAACCATTGATAGGCAGTAGATGATGAATAATGTCAATCTACTCCTGATACC
ACACACTTGGGGTGGTTCCATATCTTAACGAAAAACCCCTT
>chr7B_1
GCTGGTCAAGAACTTTGGAGAATCCGTCGCGTCGCTCCAAAACGCTCATGCAAATGATGCACCTCCCATGTGTTCCTTGG
TCCATTTCCACAACAACCTAAAAACAATCCAGGCAATTTGCACGCGACCTTCAATTCTCTGGTGCTGATCGCCGGCGGAT
GGGTGGCCAATTCGCACACGTCCTTCGGTCTCGATCCATTCCGTCGACGGCCTTGAAATCATGCCGGCCGCAACTCAACT
ACCCTGCCATTCCCAAAACACAAAATTATAATGTCATGACATTCGAATTTTACAAAAAAAAAAACTG----GAAACGCAT
TCGAATTTTACAGAAACTGGAAACCCAA-AGGGCAATCGAATCGAATCCAAAACACAAAAACTGGAGC--ATATAAATCC
AATTATTTGTTGAAAATCGTGGATAGAGAAGAGCCACAGGTCTTCGCCTCAGATCACCGGCTC---ACCGCCGCGTCGGG
ATCCGAAGTGCGTCAAGCGTGTGG--------------------------------------------------------
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----------------------------------CGTCGCTCAGACGAGCGGCAGCCATGGCCCATGGCCGGGGATGCAT
GGCTCTCCAAGTCTCGGCCTGGTTCACCAACCTCA-----CCGTGCGTACGAGGCACGTACAATGCACTTGTACTGCCGC
CTCTTGACACACTGGCCCGCCCATTCACGTCTCTGCAGCCAGCTATAGCACCGGGACTGGTTTGATTAAATATCAATGCA
-----TGCAGATAC---ACACATAGATATATAGGGACAGTACACTCCCAGTCTCATGTGCCATGTCCAGCTTAGCAAAAA
AGAAACCGCCACACAACCAGTTGCAGCGCATGCCATGCTGCACGCTCAGCTCAGATCAGACCACCTCTTGATGATTGCCT
CCACTAGAGCAGAGCAGAGTATCTCCACGCCGATGCCGGAGCTATAAATACGGGGCTAGCCTCGGTTCCCACCACACTTC
AG--------------TCTTGTGCAACCGAAACAACATACTA---CAAGCAGCCCGGTCTTGTTTGCTGGAAGCTCAGCG
GGGAGGAGATCAATGGCGGGGAAGCTCTACCAGCTCATGGCCAGGCTGCACCTGGCCAAGGGACGGGCGTCGGCGGACGT
GCCCAAGGGCCACTTCGCGGTCTACGTCGGCGAGCAGCGGAAGCGGTTCGTCATCCCGACGGCGTACCTGAGGCACCCGT
CCTTCCTCGTGCTGCTCAAGCGGGTGGAGGACGAGTTCGGCTTCGACCACCGCACCGGCGGCGGCCTCACCATCCCCTGC
TCAGAGGGCGACTTCGCCGACATCGTCGGTGGCTGCTCATCCTCCTCCTCCCCGGCGGTGGATTACCACTAGATATGTA-
--GCAGCTCGTCCGACCACACCGGCGCCGGCGCATGCATCGGCCTGTCCAGCCATTGATATGATCACTGC----TAGATT
GCTACATTAGGACGGATACATTTTGTTATTAGCTGAGGAATAGTTATTCTTGGAACGTGGCATTAGTACTCATCAATGTA
CTGTTGCATTTGCTTGAACCCTGTAAATTACTCGTCACATTAAGGGATATGAGAAAGTCTGCTGCTCTCATCTCATCACA
TTGCAATTTTCTCCAGATCGGTGTTCGATGTTGGTTGCTTACAGTTTGTACCATAGGAAAGCCAAAGGTTTTTCTGTTAG
GAGT---------------GACGATACAGTGGGACACGAATACTAG----------------------------------
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----------------------------------CTAAATACATTCAGTGCCACTGTGTTCGCTATTCAACTCAGAAGAC
CTGAATTCACTTCAGGCTTTCCTCTGCCTATCAGTACCTTTATTCCGCCACTTTATTACACGATATATAGGCAGTAGATC
ATTCTCTCAGCTTTTTCTTAACGTGGATGGTTTTCTTAACTTTGATGCAGTAGAT-TTTTCTTTTAAAAAGAAGGATTAC
CCGGACCTCTGCATCACTTTGATGCACACAACTATTGATAGGCAGTAGATGATGAATAATGTCAATCTACTTCCAATATC
ACACACTTAAG--GGTTTCATGT-TTAACAAAAAACCGCTT
>chr7D_1
GCTGGTCAAGAACTTTGGAGAATCCGTCGCATCGGTCC-AAACGCTCATGCAAATGATGCACC-CCCATGTGTTCCTTGG
TCCATTTCCACA---------------TCCAGGCAATTTGCACACGACCTTCAATTCTCTGGTGCAGATCGCCGGCGGAT
GGGTGGCCAATTCGCACACGTCCTTCGGTCTCGATCAATTCCCTCGACGGCCTTGCAATCATGCCGGCCGCAACTCAACT
ACTCTGCCATTCCCAAAGCACAAAATTATAACGTCGTGTCATTCGAATTTTACGAACAGAAAAGGTG----GAAACGCAT
TCGAATTTTACAAAAACTGGAAACCCAAGGGGC------AATCGAACCCAAAACACAAAAACCGGAGCATATATAAATAT
AATTCTTTGTTGAAAATCCTCGACAGAAAAGAGCCACAGGTCTTCAGCTCAGAGCACCGGCTC---ACCGCCACGTCGGG
ATCCGAAGTGCGTCAAGCGTGTGGTGTCGCTCGGGGCAAAATTGACAAATTTGACCTATGGATGAAATCAAATCACAGAA
TGAATTGCCCATGAAACTATTTCACGCGGCTGACCTTTTTGTATGACGCCTGACACAAAGACGCCACACTACACTGTGCA
ACGCCTCACAGATAGGCGCTACACGCCTGGCCAGCGTCGCACCCGTGTGATCCGAAAATTACTAATTCAGTGTGCAGCGC
CTGAGAGCTAGGCGCCACACTATACTTCTTGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGCAACCACTAGTGCAAC
GCATGAGAGCTAGGCGCCACACTATACAGTGCAGCACCTGAGAGCTAGGCGCCACACTATACAGTGCGGCGCCTAGCTTT
TAGGCTCTGCACAATGACTTAGCAATTTTTAGGCAGTCTGGGGTGCAACGCTGGCCAGGCGTGTAGCGCCTATCTGTGAG
GCGTTGCACAGTATAGTGTGGCGCCTTCGTGTCGGGCGTTACACAAAAAGATCAGCCGCGTGAAATAGTTTCACGGGCAG
TTCATTCTATGATTTAATTTCATGTCAAATTTGTCGTCGCTCGGACGAGCGGCAGCCATGGCCCATGGCCGGAGCTGCAT
GCCTCTCCAAGCCT------------------------------------------------------------------
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>chr7D_529
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----CTCCAAGCCTCGACCTGGCTCACCAACCTCAGCTCACCGTG-----------CGTACAATGCACTTGTACTGCCGC
CTCTCGACACACTGGCCCGCCCATTCACGTCTCTGCAGCCAGCTATAGCACGGGGATTGATTTGATTAAATATCAATGCA
TGCAATGCAGATAC---ACACATAGATATCTAGGGACAGTACACTCCC------ATGTGCCATGTGCAGCTTAGCAACAA
AGAAACCGCCACACAACCAGTTGCAGCGCACGCCATGCTGCACGCTCAGCTCAGATCAGACCACCTCTTGATGATTGCCT
CCAGTAGAGCAGAG---------------------CCGGAGCTATAAATACGGAGCTGGCCTCGGTTCCCACCACTCTTC
ACCATCACTCCAGTCTCGAGCAACACACACACCACAAACATCAACCAAGCAGCCCAGTCTTGTTTGCTGGA---------
---AGGAGATCAATGGCGGGGAAGCTCTACCAGCTCATGGCCAGGCTGCACCTGGCCAAGGGGCGGGCGTCGGCGGACGT
GCCTAAGGGCCACTTCGCGGTCTACGTCGGCGAACAGCGGAAGCGGTTCGTCATCCCGACGGCGTACCTGAGGCACCCGT
CCTTCCTCGTGCTGCTCAAGCGGGTGGAGGACGAGTTCGGCTTCGACCACCGCGCCGGCGGCGGCCTCACCATCCCCTGC
TCAGAGGGCGACTTCGCCGACATCGTCGGTGGCTGCTCGTCCTCCTCCTCCCCGGCGGTGGATTACCACTAGATATGTAG
TAGCAGCTCATCCGACCACACCGGCGCCGGCGCATGCATCGGCCGGTCCAGCCATCGATATGATCACTGC----TAGATT
GCTACATTAGGACGGATACATTTTGTTATTAGCTGAGGATTAATTCTTCTTGGAACGTGGCATTAGTACTCACCAATGTA
CTGTTGCATTTGCTTGAACCATGTAAATTACTCGTCACATTAAGGGATATAAGTAATTCTGCTGTTCTCATCTCATCACA
TTGCAATTTTCTCCGGATCCATGTTCGATGTTGGTTGCTTACAGTTTGTACCATAGGAAAGCCAAAGGTTTTTCTGTTAG
GAGT---------------GACGATACAGTGGGACACGAATACTAG----------------------------------
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----------------------------------CTAAATACATTCAGTGCCACTGTGTTCGAGATTCAACTCACAAGAC
CTGAATTCACTTCAGGCTTTCCTCTGCCTATCAGTACCACGATTCCACCACTTTATTACACGATATATAGGCAGTAGATC
ATTCTCTCAGCTTTTT-TTAACGTGGATGGTTTTCTTAACTTC-ATGCAGTAGTT-TTTTCTTTTAAAAAGGAGGATTAC
CCGGACCTCTGCATCATTTTGATGCACACAACCATTGATAGGCAGTAGATGATGAATAATGTCAATCTACTCCCAATATC
ACACACTTAAG--GGTTCCATGTCTTAACAAAAAACCGCTT
>SNPs
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----------------------------------------------S---------------------------------
--------------------S----------S-----------------------------------------------S
-------------------------S----------------------------------S---SSSSSSS-----S---
-------------------------S---------------S-----------------S-S------------------
---------------------------------------------------------------SSS--------------
---------------------S----------------------------------------------------------
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-----------------------------------------S--------------------------------------
---------------------S-------------S--------------------------------------------
------------------------------------------------------------------S-------------
---------SSSSSSSS--S--S-S---S---S-------S---------------------------------------
-------S---------SS----------------------------------------S--S-------------S---
--S-------------------------S----------------------------------S----------------
-----SS------------S---------------------------------S------------------------S-
--S---S-------------------------------------------------------------------------
-------------------------------S------------------------------------------------
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---------S-------------------S------------------S-S--S--------S-------------S---
---------------------------------------------------S-----S------------SSSS------
S---------------------S---------------------------------S-----------------------
--------------------------SS----------------------------------------------------
-----------------------------------------------S--------------------------------
--S-SSSSSSSSSSSSSSS--------S--S---S--S------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-------------S-----S--S-S---------
S---S----S---------------------------------------------------------------------S
---S------S-----S--S-------------S--------S---SSSSSSS-SS------------------------
--S-SS-------------S----S------------------------------------------------SS---S-
--------SS-SS--------S-------S-------S---
>forward_1156
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----------------ACCTGCTTCACCAACCTCAC--------------------------------------------
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>reverse_2620
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-----------------------------------------------------------CCGCGACTCGATTCAGAAGA-
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