>input_sequence_84627
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----------------------------------------------------------------------ATGGGGTGCC
AAAAAGTCATCTTAGAGACGGATGCAGTTGCTCTAAAGCAGGCAATTATAAGCGACCTGTACGACTACTCAAGCCTAGGC
GTGCTGTTTAAAGAGATAAGAGCAGTGTTGCAATCAGCTTTTCAATCTTGTAAAGTAGAAACCTGCCCACGGGCATGTAA
TATTTCTGCACACTGTTTAGCTGCTCATGGTGTATGTATGGAGCGGAAGAGCTATCAGATTTGGCTTGATCCGTTTCCGA
GCCATGTAAAAAAACTTGTCGCTGGCGAGTCCAGCTTGCCTGGGTAA---------------------------------
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>chr7A_1_TraesCS7A01G233200
TGTGTTTAGTCGGTTGTCCGGGGCCGGTACGGGTTGGGGCGACGGCGCGGGCTACGGCGGCGTGGCGGCCGTGGCCTTAT
AGGCGGCGCGGAGGGACAGTGGACTCCTCCCTTCTCCTAGATATGAGTTGGCGGCGTGCGGGGCAAGGTACTGGCTACAC
AGGCGACGGCTCTGTCCTAGGTTTTGTGCTTGGGCGGTCTGGGTCT-GGCCTGAGGCGGATCTGAGTTGTCACCCCGAGT
A-----GGTTGGGTCTAGCCTGGGGTGTGCCCGTGAGTAATGTCCTCGCGGATGCGGTGGTCGGTGGTGGTGGTCGTGAC
GTCGCTTCGCCATCCTACTGATCGAT-CCAATGGCCTTAGACTTGGCATCGTTCGAGCTCACCTAGTCGAGGCCAGACGG
GTTTGACTAGGGCA-GCTCGGCTGCGTCCGTCGGCAGTCTTGGGGTCGTGCCC-CCTCCCCGCGCTGGTCCACCGGGATT
A-------------------------------------------------------------------------------
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---ATTTCCTTATTTATTATTTACTTGTTTAGCTTAATTTATTCA-TTTACTTATCTTTTCATTCATTTATTTTCCACTT
T-CTCTTTGTCTTTAGTTGGGTCTT-TTTTTGTTTCAATGTGAATAGAAGAGATATTAGCATGAATAACTCATATTGTTT
GTCCTCAAGCAGAAGGTAGAGTCTAATTTGTATGTTGTTTAAACATGAGACAACACTGACAAATTTGATTAACCTTCTTT
CGATATACATGATAATATATGATGAGGTGAGAACATGACAATAACATGTTCTTTTAGAAGTGCAACAATTTATTTGAGTT
GTGTGAACATTTTGACGATTGGTCTAAGATGAGATGTGGACCATTGGAATTAGCTTCCGCTTTTTGGCGGTTATGACTTG
ATAAATGTATACTAGATGGGCCATGCAACATGAGAGAGGGAGAAAGCAC----------------GCTTTGACCCCTAGA
GAATCAATCCTGCGTGAGCCTACAAGCTGAAGCTCTGGCCATGCTCTATGCTGTGAATGAAGCGTCAAGAATGGGGTGCC
AAAAAGTCATCTTAGAGACGGATGCAGTTGCTCTAAAGCAGGCAATTATAAGCGACCTGTACGACTACTCAAGCCTAGGC
GTGCTGTTTAAAGAGATAAGAGCAGTGTTGCAATCAGCTTTTCAATCTTGTAAAGTAGAAACCTGCCCACGGGCATGTAA
TATTTCTGCACACTGTTTAGCTGCTCATGGTGTATGTATGGAGCGGAAGAGCTATCAGATTTGGCTTGATCCGTTTCCGA
GCCATGTAAAAAAACTTGTCGCTGGCGAGTCCAGCTTGCCTGGGTAATGGAATACATTTGTGTTTCAAAAAAAGAAAGAA
ACATTGATAGACCAAGAGGCTAACGCGTGCTTCACCGCGTCGTTCTTCACTGGTGGGGTTAAGTTTTTT-CCCCTCTAGC
AGACTATTGCGATCGGTTGTTTCGTTTTGATTTTATCTGTCTTGGCTAGGTTTTAATTATGTTCTGCTAAGGTGATGCTA
GAGGCGGTATTTGTTCTAAAAGAAGAGTGGAGTAGTTCGATGCGTTGTTGTGGTGGCCTTACACATTTCAGCCTCAATGT
CATCTGGTGGTCCATGTGTGAGCCCCTTGGGAGCTCCTATTCTACGCTTAAACCATGAAATTGCAGTTATAACGCTCAAA
TGAACCGGCCCACAAACCTCTCGTACGCTCAACTCGGCTCCCTGCTCTGCTCGCTTA--GCATTTTGTGTAGAAAGGCAG
CTATCTTTTTTTCATTTAAAAAAGTTCATTAAACCAAAAGATGTTCATGGATTTT-AAAAAATGTTGCAAACTAAAAAAC
TATGCATTTTAAAATATATTTGGGAATTTAAAAACTATTAATGGATTTCAATTCTTTTCGGCAAATCTTAAATAAAGTTT
GTAAAGTAAAAAATGTTTCAAAGTTTAATAATGTTCATAAAATCTAAAAATATTCATGAATTAAATATTTTTTTGAGATT
TTTAAATATTCATAGTTCTCTATAATGTTCACAATTTTCAATAATGTTCATTAATTAAAATGTGAAAAAAGAAAGTTAAA
AATAGAAAATAGATGAAAAACCAAAAATAATAATAGGAAGAAAAAAACAAGCAGAAGGAGGAACCTCAACAAACAACACA
TATATCCTTACAGGCGGCGCCCAGCGACCCACATCCTCGACACACCAGGATGCTCCAAAGTCTAGAGAGCTTAATATCTA
GAGTAGAAGGTGACGCGCGCTTTGCCACGCCATTCCTCGGTAATGAGTTAAGTCTTTTGTTTAAACGGAATAAGTCTTCT
TTTCTTTATAA
>chr7B_1
TGTGTTTAGTCGGTTGTCCGGGGCCGGTGCATGTTGGGGCGACGGTGTGGTTTACGACGGT--------CGTGGCCCTAC
AGGTGGCGCTGAGTGGCGATGGACTCCTCCCTTCTCCTAGATATGAGTCGGCGGCGTGCGGGGCAAGGTACCGGTACGCG
CGCTAT-GGCTCTATCCAAGGGTTTGTGCTTCGGTGGGTTGGATCTGGGCCCGAGGCGGATCGGAGTTGTCACCCCGAGT
ACGTGAGGTTGGGTCTAGCCTAGGGTGTGGCCATGAGCAATGTCCTCACGGATGCGGTGATCGGTGGTGGTGGTCGTGAC
GTCGCTTCACCATCCTATGGATTGTTGCCGATGGCCTCGGACTTGGCGTTGTTCGAGCTCACCTAGTCGAGGCCAGAGGG
GTTTGACTAGGGCCGGCTCGGCGGCGGCCGTCGACAATCTTGGGGTCATGCCCCCCTCCTTGCACTGGTCCATCGAGACT
AGTTGGGGACCCAAACCCATGGACTGATGTTGGGCTAGGTGTGGAAGGATTGTCTTCTACTCTTCCTACTGGTGTTGGTG
TGTTGTGACATGGATGGTCAACGGTGTAGCGGGACATGGATGCCGAGATGGCGACCCCGAAAGATGGTCAACATGGGTTG
GCTCTTCGGTGGCCACCATGGCGGTACTGGTGGCTCGGCCTCTCAGTCGTTTTGGCAGCGAGCAGTACAGCCGCAAGTGG
CTTGGTCTAGCTCTCCGTCTTTGATAGTAGCGATGCTCAAACCCGAAGCTACAGGTTGATGCTCACCACAGCTATCTTGG
GTTCTTCTTGGTGGCACGGGCGAACTGACGAGAAAAAGATTCACGCCTCCGCACTGATGGCGATGGCGCCTACGGGCCTC
GTTCTCCTCTTAGGGGCATCGTTGTGGTTCTCCCCTTCATGTCAGGGTTCCGAGTGAAGACCCTTGTTCATCTTGGACTC
GACAGCAACGACTCTTACCACTGTATCCCCTCCTGAGTGCGTTGTCGTGGAGCTATCCACGAAAACCCTATTTACAACCT
TTTGCAGGTAATAGCAAATAGTCACTCACGCCATATCCCATGTGGGTTAGCCCATTAGCTGGGTCGCGGCTCTTGTCATT
GCTAGTCTATAGATAGGGATGACACCTGTTGGACTCCTTCCTTATATTTTCCGCCCCATCTTATTTTCCTTTTTTATCGA
TTCATTTCTTTATTTATTATTTACTCGTTTAGCTTAATTTATTTATTTTACTTATCTTTTCATTCATTTTTTTCA---TT
T-CTCTTTTTCTTTCGTTGGGTCTT-TTTTTGTTTCAATGTGAATAGAAGAGATATTAGCATGAATAACTCATATTGTTT
GTCCTCAAGCACAAGGTAGAGTCTAATTTTTATGTTGTTTAAACATGAGACAACATTGACAAATTTGGTTAACCTTCTTT
CGATATACATGATAAT---------------------GCAATAACATGTTCTTTTACAAGTGCAACAATTTATTTGAGTT
GTGTAAACATTTTGACGATTGGTCTAAGATGAGATGTGGACCATTGGAATTAGCTTCCGCTTTTGGGAAATTATGACTTG
ATAAATGTACACTAGATGGGCCATGTGACATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCTGACCCCTTGA
GAACCAATCCTGCATGAGCCTTCCTCTCCTTCCTTGAGTTTGGT------------------------------------
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-----------------------------------------------------------------------------GAA
ACATTCATAGACCAAGAGGCTAACGCGTCA------------TTCTTCACTGGTGGGATTAAGTATTTTTCCCCTCTGGC
AGACTATTGCAGTCGGTTGTTTCATTTTGATTTTATCTGT-TTGGCTAGGTTTTAATTATGTTTTGTTAGGGTGA-GCTA
GAGGTGGTATTTGTTCTAAAAGAAAAGCGGAGTAGTTAGGTGCGTTGTTGTGGTGGCCTTACACATTTCAACCTCGGTGT
CATCTGGTTGT------GTGAGCCCCTTGGGTGCTTCTATTATATGCTTAAACCATGGA---GCAATTATAACTTTCAAA
TGGACCGGCCAACAAACTGCTCGTACAATCAGCTCGGCTCCCTGCTCTCCTCGCTCGCTGCATTTTGTGTAAAAAGGAAG
CTATCTTTTTTCCATTTAAAAAGGTTCATTAAGCCAAAAGATGTTCATGGATTTT-AAAA-ATGTTGCAAAGTAAAAAAC
TATGTATTTTTAAATATATTCAGGAATTTAAAACCTATTAATGGATTTCAATTATTTTTTGCAAATCTTAAATAAAGTTT
GTAAAGTAAAAAATGTTTCAAAGTTTAATAATGTTCATAAAATTTAAAAATATTCATGAATTAAAGAAGTTTTGAGATTT
TTAAAATATTCATAGGTTTCTAAAATGTTCACAATTTTTAATAATGTTCATTAATTAAATGTA--AAAAACAAAGTTAAA
AATAGAAAATAGATGAAAAAACAAAAATAATAAGAAGG-----AAAAAAACAAGCAGGAGGGACCTCAACAAACCACACA
TAT--CCTTACACGTGGGGTCCAGGGAGCCCCATCCTCGACACACCAGGATGCTCCAAAGTCTAGAGAGCTTAGTATCTA
GACTAGAAGGTGACACGGGCTTTGCTGCTCCATTCCTCGGTCACGAGTTAAGTCTTTTGTTTAAACAGAATAAGTCTTGT
TTTCTTTAT--
>chr7D_471
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-------------------------------------------------------------------------------T
A-------------------------------------------------------------------------------
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---ATTTCCTTATTTATTATTTACTTGTTTAGCTTAATTTATTTA-TTTACTTATCTTTTCATTCATTTTTTTCA---TT
TTCTCTTTTCCTTTAGTTGGGTCTTTTTTTTGTTTCAATGTGAATAGAAGAGATATTAGCATGAATAACTCATATTGTTT
GTCCTCAAGCACAAGGTAGAGTCTAACTTTTATGTTGTTTAAACATGAGGCGACATTGACAAATTTCATTAACCTTCTTT
CGATATACATGATAATATATGATGAGGTGAGAACATGGCAATAACATGTTCTTTAAGAAGTGCC---ATTTATTTGAGTT
GTGTGAACATTTTGACGATTGGTCTAAGATGAGATGTGGACCATTGGAATTAGCTTCCGCTTTTTGGCCGCTATGACTTG
ATAAATGCATACTAGATGGGCCATGCAACATGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGCGCTCTGACCC--A
GAATCAATCCTGCGTGAGCCTTCCTTTCCTTCCTTGAGTTTGGT------------------------------------
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-----------------------------------------------------------------------------GAA
ACACTGATAGACCAATAGGCTAACGCGTGCTTCACCGCGTCGTTCTTCACTGGTGGGATTAAGTTTTTTTTTCCTCTAGC
AGACTATTGAGGTTGGTTGTTTTGTTTTGGTTTTATCTGTCTTGGCTAGGTTTTAATTATGTTCTGCTGGGGTGATGCTA
GAGGCGGTATTTGTTCTAAAAGAAGAGTGGAATAGTTCAGTGCGTTGTTGTGGTGGCCTTACACATTTCAGCCTCGATGT
CATCTGGTGGTCAGTGTGTGAGCCCCTTGGGAGTTCCTATTCTACCCTTAAACCATGGAATTGCAGTTATAACGTTCAAA
TGGACCGGCCCACAAACCTCTCGTACGCTCAGCTCGGCTCCTTGCTTTGCTCGCTTA--GCATTTTGTGTAGAAAGGCAG
CTATCTTTTTTACATTT-AAAAAGTTCATTAAACCAAAAGATGTTCATGGATTTTTAAAA-ATGTTGCAAACTAAAAAAC
TATGCATTTTAAAATATATTCAGGAATTTAAAAACTAATAATGGATTTTAATTCTTTTTTGTAAATCTGAAACAAATTTT
GTAAAGTAAAAAATGTTTCAAAGTTTAATAATGTTCATAAAATTTAAAAATATTCATGAATTAAATATTTTTTGAGATTT
TTAAAATATTCGTAGTTCTCTATAATGTTCACAATTTTCAACAATGTTCATTAATTAAAATGTGGAAAAAGAAAGTTAAA
AATAGAAAATAGGTGAAAAACCAAAAATAATAATAAGAAGAAAAAAACAAGCAGAAGGAGGAACCTCAACAAACAACACA
TATATCCTTACAGGCGGCGCCCAGCGACCCACATCATCGACACACCAGGATGCTCCAAAGTCTAGAGAGCTTAGTATCTA
GAGTAGAAGGTGACGCGCGCTTTGCCGCGCCATTCCTCGGTAATGAGTTAAGTCTTTTGTTTAAACGGAATAAGTCTTCT
TTTCTTTAT--
>SNPs
----------------------------S-SS-------------S-S--SS----S---SSSSSSSSS-------S--S
---S-----S---S-S-SS-----------------------------S----------------------S--SSSSSS
S-SSSSS------S---S---S---------S--S--SS---S--------S----------S-----------------
---------------------S-------S--S----S---------S-----------S--------------------
--------S--------SS---S-S----S-------SS--------S-S---------------------------S--
-------------S--------S---S------S--S----------S-----------SS--S--------S--S--S-
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-------------------------------------------S-------------------------S---SSSSS--
--------S-----------------------------------------------------------------------
-----------S-----------------S-------------------------S------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------S----S--SSS-------------------S--------S--
---------------------S-SSSSSSSSS--SSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
---------------------------------------------------------S----------------------
-----------S---------------------------------------------------------S----------
---------------------------------------S-----------------------------------S----
------------SS-------------------------------------------S----------------S-----
--S----------------------------S------------------------------------------------
-----------S------------------------------------------------S-------------------
--------------------SS------------------------------------SS--------------------
-------------------------------------------S-----------------------------SSSSS--
--S-------------------------------------------------------------S---------------
-----------------------------------S--------------------------------------------
-------------------------------------------------------------------------S------
--------------------------S-----------------------------------------------------
---------SS
>forward_1669
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-------------------------------------------------GAGAGGGAGAAAGCACGCTT-----------
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>reverse_2987
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--------------------------ACGCCATTCCTCGGTAATGA----------------------------------
-----------
