>input_sequence_84626
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------------------------------------ATGGGCAACGTGGTGGAG---GCGGCGGCCGCGATCTCGCCGGA
GCTCGGCGACGCGCTAGCCAAGGTGGCCGTGTTCGCGCTCGTGCAGGGGCTGGTCTACCTCATCCTGCGCAAGTCCTCGG
ACGTCTTCTCCACGGCCAGCGCGGCGAGGTCGCTCAGCTTCCGGCCGATGCGGAGCATGAGCGTCCGCCGCGTCCTGGCG
GCCTTCTCCGACGTCCCTGTCGGCGTTCCGGATGACGCCGGCTCCTCCGTGACCCCGCAGGCCGGTGATGCTGACCGTGA
CCGGAGGGCAGACTAG----------------------------------------------------------------
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>chr7A_1_TraesCS7A01G167400
TCACATAATCCTACTCGACTTGGTATCCAAAGCATGTCA-TTGTGTTCTTTGGCCGTCAATTGCTTTTTC-------TTA
CAATTCATTTTGCCTCCACATGCCTCACCCGTGTTACCGTGTACACGTCAGCCTGAGGAGGCAAAGCAATGGCTTTCCTT
GTACGATTGACAAAAACTGACCACGAGCA---------------------GCATCGCCTGACTCCCGGTGACTCGCCACT
CGCCAGAGCAAATCGCAGACGCTACAGCT-AGCTGCCTTGTGGCAGCAAGCAATGGACTTGTGAGCCAAGCATGCGCGCA
TGGGGCTGGACGCCATAAACCACCGATCGATGAGCATGCAATTGCTTGGCTTGCAAGAACCGGCCACCG-------CCAC
CACCGCGTCCCGGCGGAAAACATGGCCGCCACGTGAGCTCACGTTATCCTGTCGCTGCATGCCGCCCTGCTAATTCCAGC
CATTAGCTAGGGCCCGGCAAGCAAGAAAGCGCCCGAAAATGGTCGATTGATTTGCCTTTTTCTCATTTCGAGTCGATCGA
GG------------------------------------------------------------------------------
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------------TTAGCCGCAAGCAAATGGAGAGTGCGCCTTCCGAGCCAATGGCCCTGCTATCCATGACTCATGCGTGC
CACCTCGGAGAGGGTACTCCCTCGGAGACGATCGCTTCCCAAAGCGGAGTTGAGAC--CGTTCGTCCAGACACAGGTCCA
TGTGACAGAGACACAA------AGTACACGATGACGAGCGAAGGCAAGGGCAGGCCATGAG----------------GTT
CAGATGTGGGAACAAAACGTGGAGGCTTGCACCACCTCCTTCGCGCGCTTGCGTGCAAGGCTCACGCCGCCGGAAAGGCA
ACTTGACGCAAGCCGCGTGCCGGCCAGCCC----TATATATAAACAACGACCAATCGTACACAGGGCACAGAAGCAGAGC
ACATTCTCTTCGACTGTAAGCCACTTTACACAGTTCGAACGCGCCGGTTCGCAGTCTCGTCGACTGTCATCGTCGGCGGC
CAGTTGAGCTGGTTTAGTTCTTAGCCTCTTAGGG-AATGGGCAACGTGGTGGAG---GCGGCGGCCGCGATCTCGCCGGA
GCTCGGCGACGCGCTAGCCAAGGTGGCCGTGTTCGCGCTCGTGCAGGGGCTGGTCTACCTCATCCTGCGCAAGTCCTCGG
ACGTCTTCTCCACGGCCAGCGCGGCGAGGTCGCTCAGCTTCCGGCCGATGCGGAGCATGAGCGTCCGCCGCGTCCTGGCG
GCCTTCTCCGACGTCCCTGTCGGCGTTCCGGATGACGCCGGCTCCTCCGTGACCCCGCAGGCCGGTGATGCTGACCGTGA
CCGGAGGGCAGACTAGTTGAAGTGCTT--TGTGTTGAACTAATGTACGAGTCAGCGGTGCGTGCTTTCTTAGTTTCTTAG
CTATCGTTTGTAGTGATTGTTCTTAAGAAAGG-TTATATGATGAGCATAAAAAAA-TTGTGTGTGTACAGTCGATTTAAC
TGCAATGGATCATTCGATTTTATTTTAAACGAAATATGCTCCTGTTTCTGGCTGCTTATCGGGTCGATATATAGCTGTTG
CTTTGTGTTCAGCATGGTTTCAATCTTTAGAAAGGCAGACTCCCCTTTTGCAAGATAGCTCCATATATATGGTCCAAAAT
GCAGCCTCCCTTTGTTTTTTGTATATTTTTTTTTGGTAGAGAGACAGCCAATATTAGGTGAATTTTGGTAGAGAGACATG
TAGAGTTATGTGAGAAATTTTCCAAAAACGACGCTTTGGCCGAGTGGTTGAGGCGTGTGCCTGCTAAGTACATGGGCTCT
GCCCGCGAGAGTTCGAATATCTCAGGCGTCGA--ATTTTTTTCTCTATTTTGCTAAATCTGTCGCATGATTTATCAGAAC
GAAGATAGTAATAATAATGATTAAAAAGTTGCAACATGAACCGGTATATATGTGCATGATTTTTTTGGGAAATATCCAAC
TTGTTTTCACTAATTACACCAGACATATTCTATATTGTCGCACAGCTAAATCTGTCGCATGATTTATCAGAACGAAGATA
GTAATAATAATGATTAAAAAGTTGCAACATGAACCGGTATATATGTGCATGATTTTTTTGGGAAATATCCAACTTGTTTT
CGCTAATTACACCAGACATATTCTATATTGTCGCACAGCTAAATTTGTAGCATGATTTATCAGGAGGAAAATAGTAATAA
TAATGATTAAAAAGTTGCAGCATGAACCGGTATATATGTGCATGATTTTTTTGGGGATTTTCGCAACTTAAAGATCCAAC
TTTTTTCGCTGATTACACCTGATCTATTCTATATTGTCGCACAATATGCATAGAGATGGATC
>chr7D_28
---------------------------CAAAGCATGTCATTTGTGTTCTTTGGCCGTCAATTGATTTTCGAGAA---TTG
CAATTCATTTTGCCTCCACGTGGCATGTCTCAC---CCGTGTACACGTCAGGCTGAGGAGGCAAAGCGATGGCTTTCCTC
GGACGATTGACACAAACTGACCACCTTGCGCGGTTTCCCACGAGCAGCTCGCATCGCCTGACTCCTGGTGACTCGCCACT
CGCCAGAGCAAATCGCAGACGCTACAGCTAAGCTGCCTTGTGGCAGCAAGCAATGGACTTGCGAGCCAAGCAAGCGCGCA
TGGGGCTGGACGCCATGCACCGC----CGATGAGCATGCAATTGCTTGTCTTGCAAGAACCGGCCACCG----CCACCAC
CACCGCGTCCGGGCGGAAAACATGGCCGCCACGTGAGCTCACGTTATCCTGTCGCTGCATGCCGCCCTGTTAATTCCAGC
CATTAGCCAGGGCCCGGCAAGCAAGAAAGCGCCCGAAAATGGTCGATTGCTTTGCCTTTTTCTCATTTCGAGTCGACCGA
GG------------------------------------------------------------------------------
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------------TTAGCCGCAAGCAAATGGATAGTGCGCCTTCGGAGCCAGTGGCCCTGCTGCTCATGACTCATGCGTGC
CA-----------------CCTCAGAGACGATCGCTTCCCAAGGCGGAGTTCAGAGCGCGTTCGTCCAGACACAGGTCCA
TGTGACAGAGACACAG--------TACACGATGATGAGCGAAGG----------------------------------TT
CAGATGTGGGAAGAAAACGTGGAGGCTTGCACCACCTCCTACGC-CGCTTGCGTGCAAGCCTCACACCGCCGGAAAAGCA
ACTTGACGCAACCCGCATGCCGGCCACCTCTACATATATATAAACAACGACCAATCGTACACAGGACACAGAAGCGGAGC
ACATTCTCTTCGACTGTAAGCCACTT-ACACATTTCGATCGCGCCGGTTCGTAGTCTCGTCGTGA--CATCGTCGGCGGC
CAGTTGAGCTGGTTTAGTTGTTG--------GGGGAATGGGCAACGTGGTGGAGGCCGCGGCGGCCGCGATCTCGCCGGA
GCTCGGCGACGCGCTGGCCAAGGTGGCCGTGTTCGCGCTGGTGCAGGGGCTGGTCTACCTCATCCTGCGCAAGTCCTCGG
ACGTCTTCTCCACGGCCAGCGCGGCGAGGTCCCTCAGCTTCCGGCCGATGCGGAGCATGAGCGTCCGGCGCGTGCTGGCG
GCCTTCTCCGACGTCCCCGTCGGCGTTCCGGATGATGCCGGCTCGTCCGTGGCGCCGCAGGCCGGTGATGCC------GA
CCGGCGCGCAGACTAGTTGAAGTGTTTTCTGTGTTGAGCTCATGTACGAGTCAGTGGCGCGTGCTTTCTTAGTTTCGTAG
TTATCGTTGGTAGTGGTTGTTCATAAGAAAGGATTGTACGATGAACATAAGAAAGTTTGTGTATGTACAGTAGATTGAAC
TGCAATGGATCGTTCGATTTTAGTTTAAACGAAATCTGCTGCTGTTTCTGGCTGCTTATCGAGGCCG---ATAGCTGTTG
CGTTGTGTTCAGCATGGTTTCAATCTTCAG-AAGGCAGACTCCCCTTTTGCAAGATTGCTCCATATATATGGTCCAAAAT
GCAGCCTCCCTTTGTTTC-------------TTTGGGAGGGAGACAACCAATATTACGTGAATTTTTGTATAG-GACACT
TAGGATTATGTGAGAATCTTTTCAACAACGACGCTTTGGCCGAGTGGTTAAGGCGTGTGCCTGCTAAGTACATGGGCTCT
GCCCGCGAGAGTTCGAATCTCTCAGGCGTCGATATTTTTTT---------------------------------------
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>chr7B_30
-----------------------------AAGCATGTCATTTGACTTCTTTAACCGTCAATTGATCTTCGACAATTTTTA
CAATTCATTTTGCCTCCAC-----ATGCCTCAC---CCGTGTACACGTCGCGCTGAGGAAGCAAAGCAATGGCTTTCCTT
GGACGATTGACAAAAACTAA-----------------CCACGAGCAGCTAGCATCGCCTGACTCCCGGTGACTCGCCACT
CGCTAGAGCAAATCGCAGACGCTACAGCT-AGCTGCCTTGTGGCAGCAAGCAATGGACTTGCGAGCCAAGCAAGCGCGCA
TGGGGCTGTATGCCATGCACCGC----CGATGAGCATGCAATTGCTTGGCTTGCAAGAACCGGCCACCCGCCACCACCAC
CATCGCGTTCGGGCGGAAAACATGGCCGCCACGTGAACCCGCGTTATCCTGTCGCTG----CCGCCCTGTTAATTCCAGC
CATTAGCTAGGGCCCGTCAAGCAAGAAAGCGCCCGAAAATGGTCGATTGATTTGCCTTTTT-TCATTTCGAGTCGATCTA
GGTTAGGGCATCTCCAGCCGTTGGCCCCCCAGGGGGCGTCAAAAAGCGCCGCCTGGGGGTGAGCCGGCGCAAAAAATGGC
CCTGGGGCGAGTCGGCCCCCAGCCGTCGGCCCCAGGGCCGTCCCTAGGCGCGTATTAAAAAAAAGATGAGACGTTCAACG
AAGTTATGATAAAAACTAGTTAAATTTCGGTCAAACATGGTAAATTTCGTCTAAACATGGCAAATTTCGGCGAAATTCGC
CATTTTCATGACATTAACCTAATCTAAAAAAGAAAGGCCCTGAAGTCATCGCCGCCATCGTCGTCGTCGTCGGCCTTCTC
CTCCTTGACGCGGGCGCCCCTGCTGAACCCGGCGTCGCCATGGCGGACTGGCGGCGGCGCGTCATCGTCGTCGTCGTCGT
CGTCGCTGTCGCGTAGGACGACGACCCCGTCTTCATCGCGGTCGCGTCGGCGCTCTTCGAAGCGGCGCAGGGCGGCACGC
TGGCGCTCCTTCACCTTCTCCCGGCGCGCCTTCTCCATCGCAAGGAGTCCTGGCGCGCCCATTCTAGGGCCGCGTCGTCG
TCGTCGAACTCCGCCTTCACCGGCGCAAGCCCCGGCTCCGTCTTCACCGGCGCCAGCCCCGGCTCCGTCTTTGGCTTGAC
GAAGCGCGGAGGAGCCGACGAGGACGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGGTGCTGCGAGTGCGCCGGC
CGAGCGGCGACTCCGCCGGGGGCTCGGCCTTGACGCCGAGCAGGGCCGGAGTGCCGGAGGAGTGCAACGAGGACCGGGAG
GAAGAAGAGGAGGAGGAGGAGCCGAACCTCCTTGGCGCCCATGGCCCGACGCGTCGGTGCTGCGCCGGGGGGTACGCCAA
CGGCGGGTCGTTGCCGCCCTCGAGGTACGTGAGCACGCCCTCGAGTGTGTGGCCGGGGACGCCCCACCAGAGGTGGCGCC
CCTCGCTGTTCTGCCGACCGCCGACCACCAGCGCCGTTGGTGGACGCCAATCGCTGCTGCTGGCGGCGCTCGAAATACGC
CGCCCAGGCCGCGTGGTTGTCAGCGGCGTACTGGGGGAGGGAGAGTTGGGCATCGGTGAGGGACGCGCGCACGATCTCGA
CCTCCTCGGTGAAGTACTTCAGCTTCGCCACGGCGTCGGGCAACAGGGAATGGGTACTCCCCCGGCGCTGAGCCTCCACC
CCGATGGCCCGGCGCGCATGTCCGGCGGCGCCGGGATGTTCGCCTGGAACAGGAGCCAGGACTCCTGTTCGCGGAGCGAA
CGGCGGCTGAAGCCGTTGGCCGCCGCCTCGTCTCCGGGGAAGCGTTCTGCCATGGCAACGGCGGGGCGGGGCGGGCTCGG
GAGAGGTAGAGGGAGGGGCCGGAGGGCGGCGCTCGGGAGAGGCAGGGAGAGGGAGGGGTTGGACGGCGGCGAGGTGGGAC
TGGTCTGGGCACAGGCGAGTGGAGGCCGCTGGCTTTTATAGCCGGGCCGCGCCCGTGTGTACGCATGCGCGGGAAGGGAG
GCGTCGGCGCGCCGAGCCGTGAAGTGCCGCACGTGAGGAATCAATGGCAAGGCTGCCGGTCAGCCTTGCCATTGATTCCC
CGCGGGAAACCGAGGCCGTTGGGGGAACGAGGCGCCGAGTCGCTGACGCGGCTGGCCCGCGTCTTTTTCGCGCCAAAACA
GCTTGCCCCGGCACCCCCCCAGCGCGCCGAGTTCGGGCTGGGTCCGCCGGCGCTGTTTTCGGCCCAAGCCGACGAAAATC
GGGCTCCTGGGGACGCGACTGGGCTGTTTTTTCGGCGCTGGTGTGAAAAAAATGCCTAGGGAGGCCTTTCTGGGACGCGG
CTGGAGATGCCCTTAGCCGCAAGCAAATGGATAGTGCGCCTTCGGAGCCGGTGGCCCTGCTGCTCATGGGTCATGCGTGC
CA-----------------CCTCAGAGACGATAGCTTCCAAAAGCGGAGTTCAGA--GCGTTCGTCCAGACACAGGTCCA
TGTGACAGAGACACAGACACAGAGTACACGATGATGAGCGAAGGCAGGGGCAGGCCATACGGTTCAGTCGTTCAGTCGTT
CAGATGTGGGAAGAAAGCGTGGAGGCTTGCACCACCTCCTTCGCGCGCTTGCGTGCAAGGCTCACGCCGCCCGAAAAGCA
ACTTGACGCAAGCCGCATGCCGGCCACCTCTA----TATATAAACAACGACCAATCACACACAGGACACAGAAGCACACG
C---TCTCTTCGACTGTAAGC----T-ACACATTTCGATCGCGTCGGATCGTAGTCTCGTCGACTGTCATCGTCGGCGGC
CAGTTGAGCTGGTTTAGTTGTTG--------GGG-AATGGGCAACGTGGTGGAG---GCGGCGGCCGCGATCTCGCCGGA
GCTCGGGGACGCGCTGGCCAAGGTGGCCGTGTTCGCGCTCGTGCAGGGGCTGGTCTACCTCATCCTGCGCAAGTCCTCGG
ACGTCTTCTCCACGGCCAGCGCGGCGAGGTCGCTCAGCTTCCGGCCGATGCGGAGCATGAGCGTCCGCCGCGTGCTGGCG
GCATTCTCCGACGTCCCCGTCGGCGTTCCCGACGATGCCGTCTCCTCCGTGGCGCCGCAGGCCGGTGATGCC------GA
CCGGCGGGCAGACTAGTTGAAGTGCTT--TGTGTTGAGCTAATGTACGAGTCAATGGTGCGTGCTTTCTTAGGTTCGTAG
TTATCGTTGGTAGTGGTTGTTCTTAAGAAAGGATTGTATGATGAGCATAAAAAAGCTTGTGTGTGTACAGTAGATTGAAG
TGCAATGGATGATTCGATTTTATCTCAAACGAAATCTGCTGCTGTTTCTGGCTGCTTATCGGGGTGG---ACAGCTGTTG
CTTTGTGTTCAGCATGGTTTCAAT--------------------------------------------------------
----------------------------------------------------ATTACGTGAATTTTTGTAGAAAGACAAT
TAGC-TTATGTGAGAATCTTGTCAACAACGACGCTTTGGCCGAGTGGTTAAGGCGTGTGCCTGCTAAGTACATGGGCTCT
GCCCGCGAGAGTTCGAATCTCTCAGGCGTCGATAATTTTTTCTCCTATTTTGCTAAAT----------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------S----SS----------
-------------------S--S-SSS--SSSSSSS---------------S----------------------------
-S----------------------SSSSS---------------------------------------------------
-------------------------------------------------------------S----------S-------
----------------SS---S-SSSS-----------------------------------------------------
----------S----------------------------------------------------------S----------
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-------------------------------S-----------S------S----------SSS----------------
--SSSSSSSSSSSSSSSSS----S---------------------------S---S------------------------
---------------S------------------S-----------S-----------SS--------------------
------------S---------------------------------------------------------------S---
----------------S---------S-S------------------------------------S--------------
--------------------------S-----S-----S------------S----------------------------
-------------------S--SSSSSSSSS-------------------------------------------------
---------------S----------------------------------------------------------------
-------------------------------------------------------------------------S------
-----------------S-----------------S---------------S-S-----------------SSSSSSS--
----S--------------------------------S----------------S---------------------S---
S-------S------S-------------------S------------------S----------------S----S---
-----------------------------------S----S----------------------S--SSSS----------
---------------------------S--S-------------------------S-----------------------
-----------------SSSSSSSSSSSSSS-----S--S------S---------S---------S-----------SS
---SS-----------SS---S---S-----------------------S------------------------------
------------------S----------------------SSS--------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2536
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------------------------------------TCCCAAAGCGGAGTTGAGAC------------------------
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>reverse_4093
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------------AGTTGCAGCATGAACCGGTA------------------------------------------------
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