>input_sequence_84302
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----------------------------------------------ATGGGGAAAAGAGGCAGGAGAGGAAGAACAAGGC
AACAAAA-AAAAAATGCCCTGAACTCACAGAGGAGAAACAAGGGACT--GAGCCAGAGGAATATATTTCATCTGCATTCC
AGAGAAAAGATCAAGCAAGCAAACAACAAACTTGGACAGAGAGCTAGGAATGCAGGAAGGGACGCCTGCGTAGCTTCATC
TTGGAGAGGAGGACGCGCTCGTGCTTGTGGACCCATGGCGGCGCCGTGGCGTGCAGAGGTTGTCAGTGAGGATGCTGCCT
GGATCCGCCTGTCAGCCGACGCGGCGTGGGAGGGATGA------------------------------------------
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>chr2B_1_TraesCS2B01G269500
GGCGTGAATCATCAGCTACTGGGTTAGGTCATGGCTGTGACATTTAATGCTATATTGCTGTGCTAACCACTCCTATAACA
CGTATGGCAATAGCAAACAAAACAGGATTACATAACCAAAAAACTATAACAGGCATGAAAATGGGACCTGGTAGCACCAC
ATACATCACTGATTCAATACATGGCACCTCTCTTAGACCAACCTAGCATGGACTTCTAAGAGTTCAGGTTCATCTGTTCA
CCTTTTCGACCAACCATGGATAAAGGTATTTACCTTCTTTCTTACTTAATCTTGAATTATTCAACAAAGTAGTTACTGGA
TGCTACACTTACCTGATAGAACCAAGTCTACCAGGTCAGATCTAGTGAACCTTCGTACAAACCATGAAGCATAACAGGAC
CATCGACACAAGTATGCCATGTCATATACTGCACCCAGATATTCTGTATAGCAGGACAAGAATATTTCACAGTTATACAC
CAGACGATTAGCTGTAAGTCTTACATAAATTCATGCAACAACGAGCGAACGAACTGGCAGCCCAAGAGCAACATTCAGCA
GTGCATTTTTGTTAGTACCGGCATGAAGGTTAACATTGCCCTTGTATGAGACTCTTCTATCTTCCCTGGTTCCAGCAGAA
CCTACACCAGAAGTAAAATTGTTTTATTCATTACTCATCTTCCAACATGCTAGTGCTGAAACAAGAGAGCAGTTTTGAGT
GGAAAACACTGTGGCTAGCTGTCTATTGATAAACAAAAGCAGACTCTCATGCACATATATAATGAATCCATTTTTCCTGG
TAAAAAATGATTTTTC-CCCCACAATTCACAGGGGGGAGTACAACTAAAAAAATCATGGTCGTGGTGTAAAGGAAAATCA
AACCGGGGAATAAGAGAACCAGCCAAACCACAGAATCGAACATCAGGCA-----TAATTCTGGGCGGGCAAGTACGGAAG
AAAAACATGCCAAAGAAGTACAACATTGTTGTCCCATATCTGAGGGATGGGGAAAAGAGGCAGGAGAGGAAGAACAAGGC
AACAAAA-AAAAAATGCCCTGAACTCACAGAGGAGAAACAAGGGACT--GAGCCAGAGGAATATATTTCATCTGCATTCC
AGAGAAAAGATCAAGCAAGCAAACAACAAACTTGGACAGAGAGCTAGGAATGCAGGAAGGGACGCCTGCGTAGCTTCATC
TTGGAGAGGAGGACGCGCTCGTGCTTGTGGACCCATGGCGGCGCCGTGGCGTGCAGAGGTTGTCAGTGAGGATGCTGCCT
GGATCCGCCTGTCAGCCGACGCGGCGTGGGAGGGATGAAGGCAGCACAA---GAGAAGCCAGCTTATAAAAAAGTGACTG
AGATTCTCACTAATTTCAGGCAGCTAAAAAGTAGGCAACCACAACTTTCAAACATGATTTTCATGTGGTTTCCACCCAGG
TTGCAATACGAAGTACAGTGATGCTTTCATCATTTACTCTCTGGAATTAGCTGTCTTTGTAATTCAGCTGATAATATCAT
GAAGCGATGCA-TAAAAAAATGTTGTGTTTCAGCTAAGTAGAGGAGTATGAATCTGCATCTTATTATTGCTAGCTAGAAA
TCTGTCCTTTTTTGCAATGATTGTAGTTTGTAGTTTATTTTCAATTTTTGTGTACTTGGAGAAGAAATTGGTGGACCTAC
CAGAATGGTGACAAGTGAATACGGGTGGTGTTTAATGTGAAAACTTTTGCTGTAGGT-----------------------
--TTGTCTTGCGTGATTAGCAGCCATTGCTATACTGGTTGAACATTGGCTTTCTGTTTGTGTAAAGAACATTTCAGTTGG
GTGACTAAATTTAGTTTATTAGTTTTCCTTTGCACACATTGGGTTGAATTTCATCATTGCACATCGAATGATGCAATTGC
AATCATCCAATTTTGAATTGGATATAAATATGCATTGCTTCCTGCTGGTTTTGATGGCTTTTT-CATTGTTTACAGGTAA
AGTGTAAGTAAATCTGGAAAATCAGCTT-TGCCAGGGGCCTGCTTACTGCTCTGCTCTTGTATGGTAACTGTATTTATAA
TATCATGTTTATACATCGTTTTATTTGTAGGTTTATTTTGGAGCCGAGATCACTTATGGTAAATGAGCAAGAGAAAAAGC
TAAATGATAGTGAGACTGCAATATCGTCGATGCAGGTATGCCTGTGAATGACCCTTGTTCTGTTGTGTCGAAATTTGAAG
GGTAAAATGGATCCTCACTCACATTGGTTTTTATGATGGCTAGACTTCCAAGGAATATCTTGAGAAACAGTTGGGAGAAG
TGGAGAACAACATTAGAGAGCTACTTCAG
>chr2D_1
GGCGTGAATCATCAGCTACTGGGTTAGGTCATGGCCGTGACATTTAATGCTATATTGCTGTGCTAACCACTCCTATGACA
CGTATGGCAATAGCAAACAAAACAGGATTACATAACCAAAAGACTATAACAGGCATGAAAATGGGACCTGGCAGCACCAC
ATACATCACTGATTCAATACATGGCACCTCTCTTAGACCAACCTAGCATGGACTTCTAAGAGTTCAGGTTCATCTGTTCA
CCTTTTCGACCAACCATGGATAAAGGTATTTACCTTCTTTCTTACTCAATCTTAAATTATTTAACAAAGTAGTTACTGGA
TGCTACACTTACCTGATAGAACCAAGTCTACCAGGTCAGATCTAGTGAACCTTCGTACAAACCATGAAGCATAACAGGAC
CATCGACACAAGTATGCCATGTCATATACTGCACCCAGATATTCTGTATAGCAGGACAAGAATAGTTCACAGTTATACAC
CAGACGATTAGCTGTAAGTCTTACATAAATTCATGCAACAACGAGCGAACGAACTGGCAGCCCAAGAGCAACATTCAGCA
GTGCATTTTTGTTAGTACCGGCATGAAGGTTAACATTGCCCTTGGATGAGACTCTTCTATCTTCCCTGGTTCCAGCAGAA
CCTACACCAGAAGTAAAATTGTTTTATTCACTACTCAGCTTCCAACATGCTAGTGCTGAAACAAGAGAGCAGTTTTGAGT
GGAAAACCCTGTGGCTAGCTGTCTATTGATAAACAAAAGCAGACTCTCATGCACATACATAATGAATCCATTTTTCCTGG
TAAAAAATGATTTTTTTCCCCACAATTCACAGGGGGGAGTACAACTAAAAAAATCATGGTCGTGGTGTAAAGGAAAATCA
AACCGGGGAATAAGAGAACCAGCCAAACCACAAAATCGAACATCAGGCACCGCATAATTCTGGGCGGGCAAGTACGGAAG
AAAAACATGCCAAAGAAGTACAACATTTTCGTCCCATATCTGAGGGATGGGGAAAAGAGGCAGGAGAGGAAGAACAAAAC
AACA--ACAAAAAATGCCCTGACCTCACAGAGGAGAAACAAGGGACT--GAGCCAGAGGAATATATTTCATCTGCATTCC
AGAGAAAAGATCAAGCAAGCAAACAACAAACTTGGACAGAGAGCTAGGAATGCAGGAAGGGACGCCTGCGTAGCTTCATC
TCGGAGAGGAGGACGCGCTCGTGCTTGTGGACCCATGGCGGTGCCGTGGCGTGCAGAGGTTGTCAGTGAGGATGCTGCCT
GGATCCGCCTGTCAGCCGACGCGGTGTGGGAGGGATGAAGGCAGCACAAGAGGAGAAGCCAGCTTATAAAAAAGTGACTG
AGATTCTCACTAATTTCAGGCAGCTAAAAAGTAGGCAACCACAACTTTCAAACATGATTTTCATGTGGTTTCCACCCAGG
TTGCAATACGAAGTACAGTGATGCTTTCATCATTTACTCTCTGGAATTAGCTGTCTTTGTAATTCAGCTGATAATATCAT
GAAGCGATGCACTAAAAAAATGTTGTGTTTCAGCTAAGTAGAGGAGTATGAATCTGCATCTTATTATTGCTAGCTAGAAA
TCTGTCCTTTTTTGCAATGATTGTAGTTTGTAGTTTATTTTCAATTTTTGTGTACTTGGAGAAGAAATTGGTGGACCTAC
CAGAATGGTGACAAGTGAATACTGGTGGTGTTTAATGTGAAAACTTTTGCTGTAGGTTTGTTAATTGTCATTGATCCATT
GCCTGTCTTGCGTGATTAGCAGCCATTGCTATACTGGTTGAACATTGGCTTTCTGTTTGTGTAAAGAACATTTCAGTTGG
GTGACTAAATTTAGTTTATTAGTTTTCCTTTGCACACATTGGGTTGAATTTCATCATTGCACATCGAATGATGCAATTGC
AATCATCCAATTTTGAATCGGATATAAATATGCATTGCTTCCTGCTGGTTTTGATGGCTTTTTTCATTGTTTACAGGTAA
AGTGTAAGTAAATCTGGAAAATCAGCTTCTGCCAGGGGCCTGCTTACTGCTCTGCTCTTGTATGGTAACTGTATTTATAA
TATCATGTTTATACATCGTTTTATTTGTAGGTTTATTTTGGAGCCGAGATCACTTATGGTAAATGAGCAAGAGAAAAAGC
TAAATGATAGTGAGACTGCAATATCGTCGATGCAGGTATGCCTGCGAATGACCCTTGTTCTGTTGTGTCGAAATTTGAAG
GGTAAAATGGATCCTCACTCACATTGGTTTTTATGATGGCTAGACTTCCAAGGAATATCTTGAGAAACAGTTGGGAGAAG
TGGAGAACAACGTTAGAGAGCTACTTCAG
>chr2A_1
GGCGTGAATCATCAGCTACTTGGTTAGGTCATGGCCGTGACATTTAATGCTATATTGCTGTGCTAACCACTCCTATGACA
CGTATGGCAATAGCAAACAAAGCAGGATTACATAACCAAAAGACTATAACAGGCATGAAAATGGGACCTGGCAGCACCAC
ACACATCACTGATTCAATACATGGCACCTCTCTTAGACCAACCTAGCATGGACTTCTAAGAGTTCAGGTTCATCTGTTCA
CCTTTTCGACCAACCATGGATAAAGGTATTTACCTTCTTTCTTACTTAATCTTAAATTATTCAACAAAGTAGTTACTGGA
TGCTGCACTTACCTGATAATACCCAGTCTACCAGGTCAGATCTAGTGAACCTTCGTCCAAACCATGAAGCATAACAGGAC
CATTGACACAAGTATGCCATGTCATATACTGCACCCAGATATTCTGTATAGCAGGACAAGAATAGTTCACAGTTATACAC
CAGACAATTAGCTGTAAGTCTTACATAAATTCATGCAACAACGAGCGAACAAACCGGCAGCCCAAGAGCAACATTCAGCA
GTGCATTTTTGTTAGTACCGGCATGAAGGTTAACATTGCCCTTGTTTGAGACTCTTCTATCTTCCCTGGTTCCAGCAGAA
CCTACACCAGAAGTAAAATTGTTTTATTCACTACTCAGCTTCCAACATGCTAGTGCTG----------------------
-------CCTGTGGCTAGCTGTCTATTGATAAACAAAAGCAGACTCTCATGCACATATATAATGAATCCATTTTTCCTGG
TAAAAAATGA-TTTTTTCCCCACAATTCACAGGGGGAAGTACAACTAAAAAAATCACGGTCGTGGTGTAAAGGAAAATCA
AACCGTGGAATAAGAGAACCAGCCAAACCACAGAATCGAACATCAG-----GCATAATTCTGGGCGGGCAAGTACGGAAG
AAAAACATGCCAAAGAAGTACACCATTTTCGTCCCATATCTGAGGGATGGGGAAAAGAGGCAGGAGAGGAAGAACAAGGC
AACA--A-AAAAAATGCCCTGAACTCACAGAGGAGAAACAAGGGACTCTGAGCCAGAGGGATATATTTCACCTGCATTCC
AGAGAAAAGATCAAGCAAGCAAACAACAAACTTGGACAGAGAGCTAGGAATGCAGGAAGGGACGCCTGCGTAGCTTCATC
TCGGAGAGGAGGACGCGCTCGTGCTTGTGGACCCATGGCGGCGCCGTGGCGTGCAGAGGTTGTCAGTGAGGATGCTGCCT
AGATCCGCCTGTCAGCCGACGCGGCGTGGGAGGGATGACGGCAGCACAAGAGGAGAAGCCAGCTTATAAAAAAGTGACTA
AGATTCCCACTAATTTCAGGCAGCTAAAAAGTAGGCAACCACAACTTTGAAACATGATTTTCATGTGGTTTCCACCCAGG
TCGCAATACGAAGTACAGTGATGCTTTCATCATTTACTCTCTGGAATTAGCTGTCTTCGTAATTCAGCTGATAATATCAT
GAAGCGATGCACTAAAAAAATGTTGTGTTTCAGCTAAGTAGAGGAGTATGAATCTGCATCTTATTATTGCTAGCTAGAAA
TCTGTCCTTTTTTGCAATGATTGTAGTTTGTAGTTTATTTTCAATTTTTGTGTACTTGGAGAAGAAATTGGTGGACCTAC
CAGAATGGTGACAAGTGAATACGGGTGGTGTTTAATGTGAAAACTTTTGCTGTAGGTTTGTTAATTGTCATTGATCCATT
GCTTGTCTTGCGTGGCTAGCAGCCATTGCTATACTGGTTGAACATTGGCTTTCTGTTTGTGTACAAAACATTTCAGTTGG
GTGACTAAATTTAGTTTATTAGTTTTCCTTTGCACACATTGGGTTGAATTTCATCATTGCACATCGAATGATGCAATTGC
AATCATCCAATTTTGAATCGGATATAAATATGCATTGCTTCCTGCTGGTTTTGATGGCTTTC-TCATTGTTTACAGGTAA
AGTGTAAGTAAATCTGGAAGATCAGCTTCTGCCAGGGGCCTGCTTACTGCTCTGCTCTTGTATGGTAACTGTATTTATAA
TATCATGTTTTTACATCGTTTTACTTGTAGGTTTATTTTGGAGCCGAGATCACTTATGGTAAATGAGCAAGAGAAAAAGC
TAAATGATAGTGAGACTGCAATATCATCGATGCAGGTATGCCTGCGAATGACCCTTGTTCTGTTGTGTCGAAATTTGAAG
GGTAAAATGGATCCTCACTCACATTGGTTTTTATGATGGCTAGACTTCCAAGGAATATCTTGAGAAACAGTTGGGAGAAG
TGGAGAACAACATTAGAGAGCTACTTCAG
>SNPs
-----------------------------------S----------------------------------------S---
-----------------------------------------S-----------------------------S--------
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-----------------------------------------------------S--------------------------
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----------------------------------------------------------------S---------------
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------------------------------S------S------------------------------------------
-------S------------------------------------------------------------------------
---------------S----------------------------------------------------------------
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---------------------------S-S--------------------------------------------------
----SS--------------------------------------------------------------------------
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-S------------------------------------------------------------------------------
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------------------S-------------------------------------------------------------
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--------------------------------------------S-----------------------------------
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>forward_152
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----------------------------------------------------GCATGAAAATGGGACCTGGT--------
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>reverse_1202
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-TGGAGAGGAGGACGCGCT-------------------------------------------------------------
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>forward_1045
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---------------------------------------------------------------GAGAGGAAGAACAAGGC
AACAA---------------------------------------------------------------------------
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>reverse_2205
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--------------------------------------------TGAATGACCCTTGTTCTGTTGTG-------------
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-----------------------------
