>input_sequence_84190
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATGTCAGGG
CGCGGCAAGGGCGCCAAGGGGCTGGGCAAGGGCGGCGCCAAGCGCCACCGGAAGATCCTCCGCGACAACATCGA-GGGCA
TCACCAAGCCGGCGATCCGGAGGCTGGCGAGGAGGGGCGGCGTGAAGCGCATCGCCGGCATGGTCTACGCGGAGACCCGC
GGCGTCCTCCATATCTTCCTCGAGGAAGTCATCCGCGACGTCGTCGCCTACACCCAGCACGCCCGCCGCAAGACCGTCAC
CGCCATGGATGTCGTCTTCGCGCTCAAGCGCCAGGGCCGAACCCTCTACGGCTTCGGAGTCTAG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>chr2D_1_TraesCS2D01G212700
AAGGAATGTTGACTATCGTGATTATTAGGAAGTATAGGATAGACATTTATTTCTACCTTGTCTTGTACTGCAAGATGGTT
CATGTACTACTATGTATTTGTTCACGAGGCTCAAGCAATACAACAACAATTCCACCAATCATCTTTCCTCCTACAAATTC
AATGAAATGTCCGTTATCGGAAAAATTAGTACCCCTTCGTCTCAAAACAAGTGTTTTATCTTTAATACAACTTTATACTA
AGTTAATACAAAGTTAAGACACTTATTTTAGATCCCGCAAGAAAAATGACATTTATTTTAGAATGAAGGGAGTACATCAT
TAATCGTGTGTACAAGACGTACATTTTTTTAGCCGTATACAGGACATGCCAACTGTTATGTACCGAGGTGCTTGATCGGA
CGAGACCTGCTAGTACATACATTAATTAGATTATATATCAGCCGAGTATTACTTTATAATTAGCAAAAATCAATAAATAC
AATACCA-GGGCAAAATGATCTTTTCATATCAACATTTAACACCTTTT--TTTTGCGGAATCACATTTAACACCGTTAGT
GGTCAAAATAGATGAAAGTGTCACATAAGGAATACAATTTACATCCAGTGTCAAATAAGGAAGAAACTGTATTTTTTGTG
CCAAATAAAGAAGTAGATTTTAAGAAAGGACCAAATAAAGAATTCTCTCAAAAAAAAAAAAA-------CAGACTCGGCT
GGCTCCAATTGATCAGATGGGCTGCTACCACTAAACGATCAGATGGGTTGCTACCGCTAG---GGCCGCACTAAATCGGT
GGCTCGTTGGTTGC-TGAGTCGCTGAAAACCGACGAGCAGTTTTTTTATTTTTGACAACAAACCGACGAGCAGTTTGGAG
ACTTCCCTCCCAAATCCTT-CCCATTCCCATATAAACTAACCCTCACCCTGAACT---CCCAACCCCATCACAAGCGTCA
----CCCTCCAA------AGCAGTTCCTCTTCTTCCT---AATCACCCTCTCGTAGCGGACCGGAGCGGCGATGTCAGGG
CGCGGCAAGGGCGCCAAGGGGCTGGGCAAGGGCGGCGCCAAGCGCCACCGGAAGATCCTCCGCGACAACATCGA-GGGCA
TCACCAAGCCGGCGATCCGGAGGCTGGCGAGGAGGGGCGGCGTGAAGCGCATCGCCGGCATGGTCTACGCGGAGACCCGC
GGCGTCCTCCATATCTTCCTCGAGGAAGTCATCCGCGACGTCGTCGCCTACACCCAGCACGCCCGCCGCAAGACCGTCAC
CGCCATGGATGTCGTCTTCGCGCTCAAGCGCCAGGGCCGAACCCTCTACGGCTTCGGAGTCTAGATTCCTGCTGTGCTGT
GCTGT------GCTGGTGGCGGTCGTGTTTCTCTTGTGTGATATGTGCCGTGGTAGATGGGATTTACTTCTCTGGCGTGC
GTTTGTGTTCAGTAT-------------------GCGTTCAATAAAACTACTCTGATCCCGAACCCTGACGAAATGCTTC
AGTGCTGAATCGTGTTACCGTTTTTCTAAGACTGACTGATCTGGTCCGTTCCAATCA-------TCACTTAGATTGTATA
GCCGTGTT------GCTAGAATTTTACACTCGAGTTGCAATTTTATCAGTATCTTCT-CACTCAACGCAAACTGTGGGAG
ATCTTTGCCATGTTTTAGTTTGGGTTCAGTGGATCCTGGTAGAGACACGTCCAACCCTAGCCGCCCCTCCAAGCCGCCCC
TCCTCCTCCTCCCTCCCAACCCTAGCCGCCCCTCC-T------CCTCCTCCCTCCTCCTCCCTAGCCGCCCCTCCTCCTC
TTCCCTTCCTCGCCGCCGCCTGAGGCAGCCGCCGGGCAAGCCCGGGGCGCCAAGGATGGTGGCGGCGGGGCCTCGGTTAC
CCTGCCTCTGCGTGGGGAACCCCGGATCTGGAGCGGCGGCTCCATTGGCAAGGCACGGCCGGCTAGCAGCCGTGCGGGGG
GTGGATCTGGCGTCCCAACTGCGTGGGCGGC-GGGATCCGGTGGTCATTGGTGGCCGGTGGCGGTTTCTGCGGTGGCCAG
TGCG-CGCG-TCTGGCGCGTCCCCT---CCTCCCCTGTTCGGTGTGCGTGCCAGCCTCGTCGGGCCGCACTTCCTTGGGT
CGCCGGTTCTGTATAGGAGGCGTTGCTGGTGGCGGGGATCTAGTTCGGGCGAAATCCCTGGTCGGCCATGGCCAGCCGCA
TCGACGGCGACGCCTGAGGGCGCCGTT-CCCTTCCTTGGAGGCGTCGGTATGGACTGATCCCCTCACTTCCCCTTCCCCT
AGGTCTCCCGGGCGAAAGCCCTAACTTTGTTGGGCGGCGACGGCGCTCACGGCGCCGTTCCCTTTTTGAAGGCGCCG
>chr2A_428
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGATTATATATCAGCCGAGTATTACTTTA--ATTAGCAAAAATCACTAAATAC
ATTACCAGGGGCAAAATGATCTTTTCATATCA-CATTTAACACCGTTATATTTTGCGGAATCACATTTAACACCGTTAGT
GGTCAAAATAGATGAAAGTGTCACATAAGGAATAAATTTTACATCCAGTATCAAATAAGGAAGAAACTATATTTTTTGTG
CCAAATAAAGAAATAAATTTTAAGAAAGGACCAAATAAAGAATTCTCTCTCTCTCTCTCAAAAAAATGCCAGATTCGGCT
GGCTCCAATTGATCAGATGGGCTGCTACCCTTAAACGATCAGATGGGTTGCTACCGCTAGATGGGCCGCACCAAATCGGT
GGCTCGTTGGTTGCCTGATTCGCTGAAAACCAACAAGCATTTTT----TTTTTGACAACAAACCGACTAGCAGTTTGGAG
ACTTCCCTCCCAAATCCTTCCCCATTCCCATATAAACTAACCCTCACCCTGAACT---CCCAACCCCATCACAAGCGTCA
----CCCTCCAA------AGCAGTTCCTCTTCTTCCT---AATCACCCTCTCGTAGCGGACCGGAGCGGCGATGTCTGGG
CGCGGCAAGGGCGCTAAGGGGCTGGGCAAGGGCGGCGCCAAGCGCCACCGGAAGATCCTCCGCGACAACATCGA-GG-CA
TCACCAAGCCGGCGATCCGGAGGCTGGCGAGGAGGGGCGGCGTGAAGCGCATCGCCGGCCTCGTCTACGGGGAGACCCGC
GGTGTCCTCCATATCTTCCTCGAGGAAGTCATCCGCGACGTCGTCGCCTACACCCAGCACGCCCGCCGCAAGACCGTCAC
CGCCATGGACGTCGTCTTCGCGCTCAAGCGCCACGGCCGAACCCTCTACGGCTTCGGAGTCTAGATTCCTGCTGTGCTGT
GCT-----------GGTGGGGGTCGTGTTTCTTTTGTGTGATATGTGCCGTGGTCGACGGGATTTACTTCTCTGGCGTGC
GTTTGTGTTCAGTGT-------------------GCGTTCAATAAAACTGCTCTGATCCCC-ATCCTGACGAAATGCTTC
AGTGCTGAATCGTGTTACCGTTATTCTAAGACTGGCTGATCTGATCCGTTTCAATCAGTGCGAATCACTTAAATTGTATA
GCTGTGCT------GCCAGAATTTTACACACGAATTGCAATTTTATAAGTATTTTTT-CACTCAATACAAACTGTGGGAG
ATCTTTGCCATGTTTTAGTTTGGGTTCAGTGG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>chr2B_835
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------TTTTTGACAACAAACCGACGAGCAGTTTGGAG
ACTTCCCTCCGAAATCCTT-CCCATTCCCATATAAACTAACCCTCACCCTGAACT---CCCAACCCCATCACAAGCGTGA
----CCCTCCAA------AGCAGTTCCTCTTCTTCCT---AATCACCCTCTCGTAGCGGACCGGAGCGGCGATGTCTGGG
CGCGGCAAGGGCGCCAAGGGGCTGGGCAAGGGCGGCGCCAAGCGCCACCGGAAGATCCTCCGCGACAACATCCAGGG-CA
TCACCAAGCCGGCGATCCGGAGGCTGGCGAGGAGGGGCGGCGTGAAGCGCATCGCCGGCCTCGTCTACGGGGAGACCCGC
GGCGTCCTCCATATCTTCCTCGAGGAAGTCATCCGTGACGTCGTCGCCTACACCCAGCACGCCCGCCGCAAGACCGTCAC
CGCCATGGACGTCGTCTTCGCGCTCAAGCGCCATGGCCGAACCCTCTACGGCTTCGGAGTCTAGATTCCTGCTG-----T
GCTGT------GCTGGTGACGGTCGTGTTTCTCTTGTGTGATATGTGCCGTGGTAGATGGGATTTACTTCTCTGGCGTGC
GTTTGTGTTCAGTAT-------------------GCGTTCAATAAAACTACTCTGATCCCGAATCCTGACGAAATGCTTC
AGTGCTGAACCGTGTTACCGTTTTTCTAAGACTGATTATTCTGGTCCGTTCCAATCA-------TCACTTAGATTGTATA
GCTGTGCT------GCTAGAATTTTACACACGAATTGCAATTTTATAAGTATTTTTTTCACTCAATACAAACTGTGGGAG
ATCTTTGCCATGTTTTAGTTTGGGTTCAGTGG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>chr2B_869
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--TTCCCTCCTAAATCCTC-------CCAATATAAACCAACCCCC-CACCCTCAAATCCCCAATCCCATCGCAAGCACCA
GACTG--TCCAA------AGCAGCTCCTCTTCTTCCT---AATCACACTCCCCCAAATCC----AGCGGCGATGTCTGGG
CTTGGCAAGGGCGGCAAGGGGCTTGGCAAGGGCGGCGCCAAGCGCCACCGGAAGGTCCTCCGCGACAACATCCAGGG-CA
TCACCAAGCCGGCGATCCGGAGGCTGGCCAGGAGGGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGACCCGC
GGCGTCCTCAAGATCTTCCTTGAGAACGTCATCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCAC
CGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCTATGGCTTCGGAGGCTAGATTCCTGCCG-----T
GCTGTGCCTGTGCTGGTGGCGGTCGTGTGAC-C-TGTGTGATATGTGTCGTGGTGGATGGGGTTTACTTCTCTGGCGTGC
GTTTGTGTCGAGTATTCTGTAATACTACCAGTTTGCGTTCAATGAAAGTACTCTGATCCTGAATTCTGATGAAATTCTTC
AGTGATGAATCGTGTTACCGTTTTTCTAAGACTGACTG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>chr2D_892
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CCCATATAAACCAACCCCC-CGCCCTCAGATCCCCAATCCCATCGCAAGCATCA
GACTCCTCCAAAGCAGGCAGCAGCTCCTCTTCTTCCT---AATCACACTATCT---CGGAGAGGAGCGGCCATGTCTGGG
CGCGGCAAGGGCGGCAAGGGGCTGGGAAAGGGCGGCGCCAAGCGGCA-------GTCCTCCGCGACAACATCCAGGG-CA
TCACCAAGCCGGCGATCCGGAGGCTGGCGAGGAGGGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGACCCGC
GGCGTCCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCAC
CGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGGCCGCACCCTCTACGGCTTCGGAGGCTAGATGCGTGGTG-----T
GCTGT------GCTGGTGGCTGTCGTGTTTCTC-TGTGTGATATGTGCCGTGGTGGATGGGATGTACT-CCCTGTCGTGC
GTTTGTGTTCAGTAGTCTGTAATATCATTA---TGCGTTCAATGAAAATACTCCGATCCTGAGTTCTGACGAAATGCTTC
AGTGATGAA-------ATCGTTTTTATAAGACATACTGATTTGATCCGTTCATTTTTTCT--------TTAGATTGTATA
GCTGTGCCTGTGCAGCTAGAATTTCACAC---AGTTGCAATCTGATCAGTCTTTTGT-CACGCATTGCAATCTG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>chr2A_892
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CCCATATAAACCAACCCCCGCGCCCTCAAATCCCCAATCCCATCGCAAGCATCA
GACTCCCTCCAA------AGCAGCTCCTCTTCTTCCTCCCAATCACACTCCCT---CGGAGAGGAGCGGCCATGTCCGGG
CGCGGCAAGGGCGGCAAGGGGCTGGGAAAGGGCGGCACCAAGCGCCACCGGAAGGTCCTCCGCGACAACATCCAGGG-CA
TCACCAAGCCGGCGATCCGGAGGCTGGCCAGGAGGGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGACCCGC
GGCGTCCTCAAGATCTTCCTCGAGAACGTCATACGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCAC
CGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCTACGGCTTCGGAGGCTAGATGCGTGGTG-----T
GCTGT------GCTGGTGGCGGCCGTGTTTCTC-TGTGTGAT-TGTGCCGTGGTGGATGGGATGTACT-CCCTGTCGTGC
GTTTGTGTTCAGTA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>chr7D_1676
CTCCC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGCCGCCCC
TCCTCCTCCTCCCTCCCAACCCTAACCGCCC---C-T------CCTCCTCCCTTCTCCTCCCTAGTCGCCCCTCCTCCGC
TTCCCTTCCTCGCCGCCGCCTGAGGCAGCCGCAGGGCAAGCCCGGGGCGCCAAGGATGGTGGCGGCGGGGCCTCGGTTGC
CCTGCCTCTGCGTGGGGAACCCCTGATCTGGAGCGGCGGCTCCATTGGCAAGGCACGGCCGGCTAGCAGCCGTGCGGGCG
GTGGATCTGGCATCCCGGTCGTGCGAGCGGCGGG-ATCCGGTGGTCGTTGGCGGCCGGCGGCAGTTTCTGCGGTGACCGG
TGCG-CGCGATCTGGCGCCTCCCCT---CCTTCCCTGTTCGGCGTGCGGGCCAGCCTCGTCGGGCCGCGCTTCCTTGGGT
CGCCGGTTCTGTACAGGAGGCGCTGCTGGTAGTGGGGATCTAGTTCGGGCGAAATCCCTGGTCGGCCATGGCCGGCCGCG
TCGACGGCGACGCCCGAGGGCGTCGTTCCCC-TCCTTGGAGGCGTCGGTATGGACTGATCCCCTCACTTCCCCTTCCCCT
AGGTCTCTCGGGCGAAAGCCCTAACTTTGTTGGGCGGCGACGGCGCTCACGGCGTCGTTCCCTTCTTGAAGGCGCCG
>chr2D_1678
CCATAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CCGCCCC
TCCTCCACCTCCCTTCCAACCCTAGCAGCCTCTCC-T------CCCCCTCCCTCCTCCTCCCTAGCCGCCCCTCCTCCTC
TTCCCTTCCTCGTCGCTGCCTGAGGCAGCCGCCGGGCAAGCTCGGGGCGCCAAGGATGGTGGCGGCGGGGCCTCGGTTGC
CCTGCCTCTGCGTGGGGAATCACAGATCTGGAGCGGCGGCTCCATTGGCAAGATCTGGCCGGCTAGCAGCCGTGTGGGCG
GTGGATCTGGCGTTTCGGCCGCGCGGGCGCCGGG-ATCCCGTGGTCGTTGGCGGCCGGCGGCGGTTTCTGCGGTGGCTGG
TGCG-CGCGATCTGGTGCCTCCCCT---CCTCCCTTGTTCGGCGTGCGGGCCAGCCTCATCGGGCCGCGCTTCCTTGGGT
CTCCGGCTCTGTATAGGAGGCGCTGCTGGTGGCGGGGATCTAGTTCGGGCAAAATCCTTGGTCGGCCATGGCCGGCCGCG
TCGACGGCGACGCCTGAGGGCGTCGTT-CCC-TCCTTGGAGGCGTCGGTATGGACTGATCCCCTCACTTCCCCTTCCCCT
AGGTCTCC-GAGCGAAAGCCCTAACTTTGTTGGGCGGCGACGGCGCTCACGGCGCCATTCCCTTCTTGAAGGCGCCG
>chr6D_1681
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGCCGCCCC
TCCTCCTCCTCCCTCCCAACCCTAGCCGCCTCTCC-T------CCCCCTCCCTCCTCCTCCCTAGCCGCCCCTCCTCCTC
TTCCCTTCCTCGCCGCCACCTGAGGCAGCCGTCGGGCAAGCCCGGGGCGCCAAGGATGGTGGCGGCGGGGCCTCGGTTGC
CCTGCCTCTGCATGGGGAATCACAGATCTGGAGCGGCAGCTCCAGTGGCAAGGCACGGCCGGCTAGCAGCCGTGCAGGCG
GTGGATCTGGCGTCCCGGCCGCGCGGGCGGC-GG-ATCCGGTGGTCGTTGGCGGCCGGCGGTGGTTTCTGCGGTGGCCGG
TGCG-CGCGATCTGGCGCCTCCCCT---CCTCCCCTGTTCGGCGTGCGGGCCAGCCTCGTCGGGCCGTGCTTCCTCGGGT
CGCCGGTTCTGTACAGGAGGCGCTGCTGGCGGCGGCGATCTAGTTCGGGTGAAATCCCTGGTCGGCCATGGCCGGCCGCG
TCGACGGCGATGCCTGAGGGCGTCGTT-CCCCTTCTTGGAGGCGTCGGTATGGACTGATCCCCTCACTTCCCCTTCCCCT
AGGTCTCC-GGGTGAAAGCCCTAACTTTGTTGGGCGGCGACGGCGCTCACGGCGTCGTTCCCTTCTTGAAGGCGCCG
>chr5D_1681
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGCCGCCCC
TCCTCCTACTCCCTCACAACCCTAGCCGCCCCTCC-T------CCTCCTCCCTCCTCCTCCCTAGCCGCCCCTCCTCCTC
TTCCCTTCCTCGCCGCCGCCTGAGGCAGCCGCTGGGCAAGCCCGGGGCACCAAGGATGGTGGCGGTGGGGCCTCGGTTGC
CCTGCTTCTGCGTGGGGAACCCTGGATCTGGAGCGGCGGCTTCATTGGCAAGGCACGGCCCGCTATTAGCCGTGCGGGCG
GTGGATCTGGCGTCCCGGCCGCACGGGCGGC-GGGATCCGATGGTCGTTGGTGGCCGGCGGTGGTTTCTGCGGTGGCCGG
TGCG-CGCGATCTGGCGCCTCCCCT---CC---CCTGTTCGGCGTGCGGGCCAGCCTCGTCGGGCCGCGCTTCTTTGGGT
CGCCGGTTCTGTACAGGAGGCACTGCTGGTGGCGGGGATCTAGTTCGGGCGAAATCCCTGGTCGGCAATGGCTGGCCGCG
TCGACGGCGACGCCTGAGGGCGTCGTT-CCCCTTCTTGGAGGCGTCGGTATGGACTGATCCCCTCACTTCCCCTTCCCCT
AGGTCTGCCGGGCGAAAG-CCTAACTTTGTTGGGCGGCGACGGCGCTCACGACGCCTTTTCCTTCTTGAAGGCGCCG
>chr2D_1683
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CCGCCCC
TCCTCCTCCTCCCTCCCAACCCTAGCCGCCCCTCCTCCTCCTCCCCCCTCCACCCTCCACCCTAGCCGCCCCTCCTCCTC
TTTCCTTCCTCGCCGCCGCCTGAGGCAGCCGCCGGGTAAGCCCGGGGCGCCAAGGATGGTGGCGGTGGGGCCTCGGTTGC
CCTGCCTCTGCGTGGGGAACCCCGGATCTGGAGCGGCAACTCCATTGGCAAGGCACGACCGGCTAGCAGCCGTGCGGGCG
GTGGATCTGGCGTCCCGGCCGCGCGGGCGGC-GGGATCCGGTGGTCGTTGGCGGCCGGCGGCGGTTTCTGCGGTGGCCGG
TGCG-CGCGATCTGGCGCCTCCCCTCCTCC---CCTGATCGGCGTGCGGGCCAGCCTCGTCGGGCCGCGCTTCCTTGGGT
CACCGGTTCTGTACAGGAGGCTCTGCTGGTGGCGGGGATCTAGTTCGGGCGAAATCCCTGGTCGGCCATGGCCAGCTGCG
TCGACGGCGACGCCTGAGGGCGTCGTT-CCCCTCCTTGGAGGCGTCGGTATGGACTGATCCCCTCACTTCCCCTTCCCCT
AGGTCTCCCGGGCGAAAGCCCTAACTTCGTTGGGCGGTGACGGCGCTCACGGCGCCGTTCCCTTCTTGAAGGCGCCG
>chr3A_1695
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CTCCTCCCTCCCAACCCTAGCCGCCCCTCCTT------CCTCCTCCCTCCTCCTCCCTAGCCGCCCCTCCTCCTC
TTTCCTTCCTTGCCGCCGCCTGAGGCAGCCTCCGGGCAAGCCCGGGGCGCCAAGGATGGTGGCGGCGGGGCCTCGGTTGC
CCTGCCTCTGCGTGGGGAACTCCGGATCTGGAGCGGCGGCTTCATTAGCAAGGCACAACCGGCTAGCAGCCGTGCAGGCG
GTGGATCTGGCGTCCCGGCCGCGCGGGCGGT-GGGATCCGGTGGTCCTTGGCGGCCGACGGCGGTTTCTGCGGTGGCCGG
TGCG-CGCGATCTGGTGCCTCCCCTCCTCC---CTTGTTTGGCATGCGGGCCATCCTCGTCGGGCCGCGCTTCCTTGGGT
CGCCGGTTCTGTATAGGAGACGCTGCTAGTGGTGGGGATCTAGTTCGGGCAAAATCCCTGGTCGGCCATGGCCGGCCGCG
TCGACGGCGACGCCTGAGGGCGTCGTT-ACCCTCCTTGGAGGCGTCGGTATGGACTGATCCACTCACTTCCCCTTCCCCT
AGGTCTCCCGGGCGAAAGCCCTAACTTTGTTGGGTGGCAACGGCGCTCACGGCGTCGTTCCCTTCTTGAAGGCACCG
>chr3D_1701
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CCTCCCAACCCTAGCTACCCCTCCTCCTCCCTAGCCGCCTCTCCTCCTCCCTAGCCGCCCCTCCTCCTC
TTCCCTTCCTCGCCGCCGCCTGAGGCAGCCGCCGGGCAAGCCCGGGGCGCCAAGGATGGTGGCGGCGGGGCCTCGGTTGC
CCGGCCTCTGTGTGGGGAACCCCGGATCTGGAGCGGCGGCTTTATTGGCAAGGCACGGCCGGCTAGCAGCCGTGTGGGCG
GTGGATCTGGCGTCCCGGCCGCGCGGGCGGC-GGGATCCGGTGGTCGTTGGCGGCCGGCGGCGGTTTCTGCGGTGGCCGG
TGCG-CGCGATCTGGCGCCTCCCCTCCTCC---TCTGTTTGGCGTGCGGGCCAACCTCGTCGGGCCGCGCTTCCTTGGGT
CGTCGTTTCTGTATAGGAGGCGCTAGTGGTGGCGGGGATCTAGTTCGGGAGAAATCCCTGGTCGGCTATGGCCGGCCGCG
TCGAAGGCGACGCCTGAGGGCGTCGTT-CCCCTCCTTGGAGGCGTCGGTATGGACTGATCCCCTCACTTCCCCTTCCCCT
AGGTCTCCCGGGCGAAAGCCCTAACTTTGTTGGGCGGCGACGGCGCTCACGGCGCCGTTCCCTTCTTGAAGGCGCCG
>chr3D_1703
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TCCCAACCCTAGCCGTC---CC-T------CCTCCTCCCTCCTCCTCCCTAGCCGCCCCTCCTCCTC
CTCCCTTCCTCGCCACCACCTAAGGCAGCCGCCGGGCAAGCCCGGGGCGCCAAGGATGGTGGCGGCGGGGCCTCGGTTAC
CCTGCCTCTGCGTGGGGAACCCCCGATTTGGAGCGGCGGCTCCATTGGCAAGGCACAGCCGGCTAGCAGCCGTGCGGGCG
GTGGATCTACCGTCCTGATCACATGGGCGGC-GGGATCCGGTGGTCGTTGGCGGCCGGCGGCGGTTTCTGCGGTGGCCGG
TGTGCCGCGATCTGGCGCCTCCCCTCCTCC---CCTGTTCGGCGTGCGGGCCAACCTCGTCGGGACGCTCTTCCTTGGGT
CACCGGTTCTGTACAGGAGACGTTGCTGGTGGCGGGGATCTAGTTCGGGAGAAATCCCTGGTCGGCCATGGCCGGCCGCG
TCGACGGCGACGCCTGAGGGCGCCGTT-CCCCTCCTTGGAGGCGACGGTATGGACTGATCCCCTCACTTCCCCTTCCCCT
AGGTCTCCCGGGCGAAAGCCCTAACTTTGTTGGGCGGCGACGGCGCTCACGGCGCCGTTTCCTTCTTGAAGGCGCCG
>chr1D_1709
CCCAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CCGCCC---C-T------CCTTGCCCCTCCTCCTCCCTAGCCGCCCCTCCTCCTC
TTCCCTTCCTCGTCGCCGCCTGAGGCAGCCGCCGGGCAAGCCCGGGGCGCCAAGGATGGTGACGGCGGGGCCTCGGTTGC
CCTGCCTCTGCGTGGGGAACCCCGGGTCTGGAGCGGCGGCTTCATTGGCAAGGCACGGCCAGCTAGCAGCTGTGCGGGCG
GTGGATCTAGCGTCCCGGCCGCGTGGGCGGC-GGGATCCGGTGGTCGTTGGCGACCGGCGGCGGTTTCTGCGGTGGCCGG
TGCA-CGCGATCTGGCGCCTCCCCTCCTCC---CCTGTTTGGCGTGCGGGCCAACCTCGTCGGGCCGCGCTTCCTTGGGT
CGCCGGTTCTGTACAGGAGGCGCTGCTGGTGGCGGGGATCTAGTTCGGGAGAAATCTCTGGTCGGCCATGGCCGGCCGCG
TCGACGGCGACGCCTGAGGGCGCCGTT-CCCCTCCTTGGAGGCGTCAGTATGGACTGATCCCCTCACTTCCCCTTCCCCT
AGGTCTCCCGGGCGAAAGCCCTAACTTTGTTGGGCGGCGACGGCGCTCACGGCGTCGTTCCCTTCTTGAAGGCGCCG
>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------SS--------------S-------
-S------------------------------S-----------S--S--------------------------------
----------------------------------S-S------------S------------------S-----------
------------S--S---------------------------------SSSSSSSSSS--------------S------
-----------------------------SS----------------------------------------S--------
------------------S------------S--S----S----SSSS--------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------------------------------------------------------------S--
-----------------------------------------------------------S-S-------S----------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--S---S----------------------S----------------------S--S---------S--------------
--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------S--S--------------------------S-----------S-------------------S-
------------------S-----------------------S-----S-------------------S-----------
-------------------------------------------------------------------------------S
-------------------------------S------------------------------------------------
----------------------------------------------------------------S------------
>forward_371
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GCCGTATACAGGACATGCCA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_1722
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GAGACACGTCCAACCCTAGC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
