>input_sequence_84188
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----------------------------------------------------------------ATGGAGACTTATTGCT
GTCGGCAGAGCCGCGAGCAGCCGGAGGGATCCCAGGGACCACGGGCGGCAGCGGCAGCGGCAGTTTGGGTAGTGGTACCA
GAGGCGGCAGCGT---CGGCAACCTGGGCACCACATCCTTCACCTCGTCGACGCCGCCACCGGCGCCGCCATTCCCTTTC
AGCTCCCTCCCGTCGCAGGACGCGAGCACCATCACCACCAGCAGCAGCAG---GAGCGCGACATCCAGACGCTTCGCCAT
TGCTACGCTTTGCTAATCAAGAACCG--GAGATATTATTGGCC------CTTTGGTATGCGCTATGG-TAG---------
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>chr2B_1_TraesCS2B01G482100
TTTTTCGTTCTGTATCCCAGTTTGTGCTAGCCATCTTATGGCACCTTGTTTAACTTATGTCTGTACTCAGATATTGTTGC
TTCCGCTGACTCGTCTATGATCGAGCACTTGTACTCGAGCCCTCGAGGCCCTTGGCTTGTATTATGATGCTTGTATGACT
TATTTTATTTGTAGAGTTGTGTTGTGATATCTTCTCGTGAGTCCCTGATCTTGATCGTACACGTTTGCGTGTATGATTAG
TGTACGATTGAATCGGGGGCGTTACAGGTTTGCTCGGGCCCCATATCCGTCTCATATTTGGGTTGAATATGGGATGCCGG
TCAGCCTGGGCGTTTTAGGCCCGTTTGAGACGTCTGTTTGGATCAAGAAAACGTGACCGGACAATCCGCCCGGACACGTC
CGTTTGAATCGAGAAAACGTGACCGGACAATCCGTTCGGACGTATGAAGCTGGTTTGAGAGGTCTGGTTGTAGATGCTCT
AAGCTCGGAGTTCAGGCTGTACAAGCACACTCTGAATTA---CATAGAAACTTTTGAGCTGGCGTCGTCTCCGTTGTTTC
GGATGTGTGCACGTACGTACACCTTACATGTGTACGGTGTACCTGCTCGCTTGATTCTGCGAGATATCGTTATCTTGGTT
TGGTTTGGTTAGCTCGCCGGCCGGCGCTTCATGATCTGTG-------CATACCAGCATAATGTTGAAGTACAAACGGATT
CCACAATTCTGGAAAAAAAATTGGTTGGCAGAACAAACTATGTGCTTCATCGTTGATGTACATTATTCATATGTTTATTC
ATAAAGGCACATTGACAAGGTTTACATTGATGACAGAGTAGGAACAAGAACCTGAACATGAACTGAAAGGAAACATGGCG
GACATATAATTGCTACAGATCAAGGCG----CACGGACGTCAGCGGAACGCCGACCGATGTTCTGCTTCCGGCCGGTGCT
AGCTTGCT----------AGAAGTCTACGACGACGACAAGTTGATCAGCTGCAGGTGCATCATCATGGAGACTTATTGCT
GTCGGCAGAGCCGCGAGCAGCCGGAGGGATCCCAGGGACCACGGGCGGCAGCGGCAGCGGCAGTTTGGGTAGTGGTACCA
GAGGCGGCAGCGT---CGGCAACCTGGGCACCACATCCTTCACCTCGTCGACGCCGCCACCGGCGCCGCCATTCCCTTTC
AGCTCCCTCCCGTCGCAGGACGCGAGCACCATCACCACCAGCAGCAGCAG---GAGCGCGACATCCAGACGCTTCGCCAT
TGCTACGCTTTGCTAATCAAGAACCG--GAGATATTATTGGCC------CTTTGGTATGCGCTATGG-TAGCTGTGTCGA
TCTGCGACTCTGCATGAGCTTAGGCTGATCCATGTGCTGCGTTTTATAGGCGAGTTG-----------------------
------------TGGAGCGGGCGGCGTGTCGGGGGTAACAGGTATACGTGTCAGGAGAGGCACATAGGTGGCGGTG----
------------TGGTACGCGGCGGCGGCCGTGG---GACGCGCGCGGGCTCCAGCTCCACCTCAGGGTCACCGGTCACG
GGCGGCCGGGGAGATAAGACGACGCATG-AATGGCATGTGCACGTCGGTGGAGCGAGGAATGGGGCGGATGGCTTCCTTT
GTCTTCTCCGTGGCCGTTGCCGA--CGTGTTGCGCGACCTTGCAGCGGCTACCCCCGGCCGGTAGTACG-AGATTGGGAA
ATTAAGAGACGACCGACGAGGTGGGTG-----------GCTACAGGCCGGCCATGCGAACGTAGGTCTGCAGTACCACA-
---TCAGTCGGGCAAACAAATGAGTGTTGCG------GTAGACGGAAAAGGAAAATATCGGATCATGGTAAAATCTTCAT
TGCAAAGAATGCGTGGTCACATACTG--------------CAACCAGAACCCGAAATTAAAAAAGAGCACAAAT-AACGA
TTATATAGATTCTAGTTGTGTATGCAATCACAAGCCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTAATCGCAG
ATAAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGACATCTTTTTGTACTTTTTG-----------TTTGC---GT
AGTAAAAATAGCCCACAGACTTCTATTTTTATTTTTTTCGTTTTGAACATTTGCATAGTAAGTAAAATAACCCATA-GAT
TACGTTTGCATATAAGTCATGTGTAATTTGAATAGACTTGCAAGCCAAGTTGAGGCAAACTGTCTCATTCATTTCATTAA
CACGTTTGAATCCTCCCTCAGTAAAGAAATAAAAAAAGAGCGT-------------------------------------
----------------------------------------------CCACCATTCGTAAGGGCAGAGCTTTCA-GATGCG
GATGACTCCTCCCGTGGAGAAGAAACCATGATC-GCCGAGAATCTGCGAAATTTGGTCAAGAAAC
>chr2D_480
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-------------------------------------------------------------------------------T
AAGCTCGGAGTTCAGACTGTACTAGCACACTCTGAATTACTACATAGAAACTTCTGAGCTGGCGTCGTCTCCGTTGTTTC
GG------------------------------------------------------------------------------
---TTTGGTTACCTCGCCGGCCGGTGCTTCATGATCTGTATATACCACATACCAGCATAATGTTGAAGTACAAACGGATT
CCACAACTCCGGAATTTTTTTTATTTGGCAGAACAAACTATGTGCTTCATCGTTGACGTACATTATTCATATG-TTATTC
ATAAAGGCACATTGACAAGGTTTACATAGATGACAGAGTAGGAACATGAA----------------AAGGGAACATGGCG
GACATATAGTTGCTACAGATCAAGGCATGCACACGGACGTGAGCGGAACGCGGACCGACGTTCTGCCTCCGGCCGGTGCT
AGCTAGCTTGCTACTAGTAGAAGTCTAA---GACGACAAGTTGATCAGCTGCAGGTGCATGATCATGGAGACTTGTTGCT
GTCGGCAGAGCCGCGAGCAGCGGGAGGGTTCCCAGGGACCACGGGC------GGCAGCGGCAGTTTGGGTAGTGGTACCA
GAGGCGGCAGCGGCACCGGCAACCCGGGCACCAGATCCTTCACCTCGTCGA------------CGCCGCCATTCCCTTTC
AGCTCCCTCCCGTCGCAGGATGCGAGCACCACCACCACCAGCAGCAGCAGGCGGAGCGCGACATCCAGACGCTTCGCCAT
TGCTACGCTTTGCCAATCAAGAACCG--GAGATATTATTCTTGGCCCTGCTTCGGTATGCGCTATGG-TAGCTGTGTCGA
TCTGCGGCTCTGCATGAGCTTAGGCTGATCGATGTGCTGCGTTTTATAGGCGAGTTG-----------------------
------------TGGAGCGGGCGGCGTGTCGGGGGTAACAGG--TACGTGTCAGGAGAGGCGCATAGGTGGCGGCG----
------------TGGTACGCGGCGGCGGCCGTGG---GACGCGCGCGGGCTCCA------CCTCACGGTCACCGGTCACG
GGCGGCCGGGGAGATAAGACGACGCATG-CATGGCATGTGCACGTCGGTGGAGCGGGGAATGGGGCGGATGGCTTCCTTT
GTCTTCTCC-TGGCCGACGTGCTGGCGTGCTGCGCAACCTTGCGGCGGTTACCCCCGCCCGGTAGTACG-AGATTGGGAA
ATTAAGAGACGACCGACGAGGTGAGTGGCTACGACGCAGCTACTGGCCAGCCATGCGCACGTAGGTCTGCAGTACCACTT
CAGTCAGTCTGGCATACAAATGAGTGTTGCG------GTAGAC------GGAAAATATCGGATCATGGTAAAATCTTCAT
TGCAAA-AACGCGTAGTCACATATGCAAGCCCCACCCACTCAACCAGATTCGGAAAAAAAAAGGTATGCGTAAGCAACGA
ATATATAGAGTTTAGTTGCGTTAGCAAACACAAGCCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTATTCGCAG
ATAAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGACATCTTTTTGTATTTTTT----TTTGAACATTTGC---AT
GGTAAAAATAACCCACAGACTTCTTTCTGTATTTTTT--GTTTTCAACATTTGCATAGTAAAATAGCCCACGGTGCTGAT
TAAGTTTGCATC-AAGTCATGTGTAATTTGGATAGACTTGCAAGCCA---------------------------------
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>chr2A_998
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-------------------------------------------------------------ATCATGGAGACTTGTGGTT
GTCGGCGGAGCCGTGGGCAGCGGGAGGGATCCCGGGGACCACGGGT------GGCAGCGGCAGGTTG------GGCACCA
GAGGCGGCACCGGCACCGGCAAGCCGGGCAGCAGGTCCTTCACCTCGTCCACGGCGCCACCGGCGCCGCCCTTCCCTTTC
AGCTCCCTCCCGTCGCAGGACGCGAGCACCAG------CAGCAGCAGCAC---GAGCGCGACGGCCAGACGCTTCGCCAT
TGCTGCGTTTTGCTGATCAAGTACCTTTGGGATAGTCTTGGGC------CTTGGCGTGGTGTGGTAGCTAGCTGTGTCGC
TCTGCAACTCTGCATGAGCTTTGGCTGATCGATGCGCTGCCTTTTATAGGCGAGTTGCCGGAGTTTGAGACGGTTGGTTG
TTCGCCTGGGCGTGCAGCGGGCGGCGTGTCAGGGG-AACACG--TACGTGTCAGGAGAGGCGCATAGGTGGCGGCGCGAG
GCGAAGGCGGTGTGGTACGCGGCGGCGCCCGTGATGAGACGTGCGCGGGCTCA---------------------------
--CGGGCGGGGAGAGAATGCATGCATGGCAATGGCATGTGCACGTCGGTGGAGCGAGGAATGGGGCGGATGGCTTCCTTT
GTCTTCTCCGTGGCCGACGTG--------CTGCGCAACCTTGCGACGGGCACCCCCGGCCGGTAGTACGCAGATTGGGAA
ATTAAGAGACGACCGACGAGGTGAGTGGCCACGACGCAGCTACCGGCCGGCCATGTGAATGTAGGTCTGCAATACCACA-
---TCAGTCGGGCAAACAAATGAGTGTTGCGCGTTGGGTAGAC------GGAAAATTTTGGATCATGGTAAAATCTTCAT
TGCAGAGAA------------------------------------------------AAAAAAGTATGCGAAAA-TAAGA
ACATATAGAATCTATTTCCACTTCCAATCACAAGCCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTATTCGCAG
ATAAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGACATCTTTTTGTATTTTTTTTGTTTTGAACATTTGCATAGT
AGTAAAAATAGCCCACAGACTTCTTTTTGTATTTTTTTT------AACATTTGCATTGTAGAATACTTGCTCCGTTCCAT
AATATAAATTTCTTTCTGTACCTTCATGGGACACCGCGATATGGGAAGTAACTATTCATGTGCAGGCTTTTTATCTGCAG
GCGTTTCTTCTGCATTTGCCTCAGCTTCAACTATCTTCCCATGTTGCCTGCAGGCGTCCCTGCATTTGCCGCAGCTTCAA
CTATCTTCCCATGTTTTTCTGCAGATAGCTCGTCACTGGGCACTGGCCACCATTCGTAATGGCAGAGGTTTTCGGATGCG
AATGACTCCTCCCGTGGAGAAGAAACCATGATCCGCTGAGAATATGCGAAATTCGGTCAAGAA--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
---------------S------S------------------------------S--------------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS--------S------------S--------------S----------------------------------------
------S--S----SSSSSS--SS--------------------------------S----------------S------
---------------------------S------------------S---SSSSSSSSSSSSSSSS----S---------
--------S-----------------S-------------S----------S------S-------S-------------
----S----------------------SSSS-----------------------------S-------------S-----
---------------------S------------------------SSSSSS----------------------------
------------S-----------S--------S-------------------S--------------------------
-------------------------------S------------------------------------------------
-----------------------------------------S----------S---------------------------
------------------------------S-------------------------------------------------
------------------------------------------SS-----------------S------------S-----
------------------------------------------------------SSSSSS-----S--------------
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----------------SS-SSSS------S-----S-------S----S-------------------------------
-----------------------S-------------------S------------------------------------
-------------------------------------------SSSSSS-------------------------------
---------S----S--------SSS----------------------SS-S----SS-----SS-SSSS---S------
S--------S--------S--S---------------------------------------------------S------
----------------------------------------------------S-----S---------------------
------------------------S---S---------S-----S----------------SSS-SS-S----S-S----
--S--------S-----------------------------------SSSSSSSSSS-SS--SSSSS--SS-S--SSS-S
SSSS--SSSS-S-SSSSS-SSS-SSSSS-SSS-SSSSSSSSSS-------------------------------------
-----------------------------------------------------------S-------S---SS-------
S-----------------------------------S------S---------S---------SS
>forward_615
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-----------------------------------GGTGTACCTGCTCGCTTGAT-------------------------
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>reverse_2355
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----------------------------------AAAGAGCGTCCACCATTCGT--------------------------
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