>input_sequence_84165
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-----------------------------------------ATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAG
GGCGGCGCCAAGCGCCACCGGAAGGTACTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCG
GAGGGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGCACCCTCTACGGATTCGGCGGCTAG-----------------------------------------------
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-----------------------------------
>chr1A_1_TraesCS1A01G363000
CAGACTTACTTTGTGGCAATGACGCTAGGAACTAGTTCGCGGCACCGCCGAT-GGATTGCTCCCTTGATGCAAGAAGCCT
AGATGTGGGCAACTAAACAACATGCAAATGTTGGTTGTTTGCCCGTTTTTCCTCGGCCAAGCTCAACTAAAACACAGATG
TAATACATACAAAATCCGTGCAAGCAAGCAAACACTCCCTAAGCAAT---------------------------------
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---------------------GGGGGATGAGAGT--GATTGCACCCACATATTGGACCAAACCATAGACAAAAGTCGTTT
CGCCCCTGAGACATATTATTTGAACAAAAGTTTGCTTTCCAACTGGAGAGGAAACATCTAACCAAATAGGAGAGGCCAAA
AAAAAGAAAGATAAACGACAACTAGCTACTTTGAAGGAAATGCATTTTTGACTCACCCC----------------GCTAT
CTGCTTTCACTCCCTCCATTCCAAAATATAGTGCGTCCGTATTTTTCGAGGTCCAACTTTAACCATAAATTTAACCAATG
AGACCGACTGCGGCGGGAGTAAAAATTATTTAATTAAAAACTTTTTTTGAATACGAATTCACTGATATAATTTGTACTCC
CGTCGCAGTCGGTCTCGTTGATTAAATTTATGATCAAAGTTGAAGCACGAGAATATAGAAATCGCTATATTTTGGAATGG
AATGAGTATGTTTCAAGAAGCAAAGGACCAATGATGGACGGAATGGATTGCAAGAAAC-AAACCCAAATGTTTCGAGCTG
CCGCCCGCGCTCCGCGCATGAAATTTTAGAGCCACATCAGCGATCCCGCCAATCCACCGGCCCAAGCTACCGGCCACGTC
ACGGATCCGCGGCATCTCTCCCCCGGATCGCCATCTTAACCGTCCACTCCATCCGCATCCAACGGCAGGCAGAGGCCTCC
TCCAGCCTCTCGTCCCCGTTAAAACGCCCCTCGCCCCTCCCCGCAAATCACATCACCAGCAGCCACCACCGTCCCTCCGA
TT---CCACATCCGCTCGCAGCTCGA----GATCGTCAGCCATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAG
GGCGGCGCCAAGCGCCACCGGAAGGTACTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCG
GAGGGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGCACCCTCTACGGATTCGGCGGCTAGGCCGCCACCAGATCAGTAGCTAGACTGTCGTTGTTTGGT--AGTACC
AGCAGTGCTCGTGGTCCTCTTGTGT----AATGGCAGCATCTCGCTGCTGTTAACCC---------TTGTTGTCTGGATG
TACTACT-----AGGATGGAATGGAAATTGTAGCAGTTTGCCCTTGAATTCGTTACCTATTCTTTCGGCCTGTTGATGTT
TGTTCGTGCGCG-GGTCAGATATTGCCAGTGCGTTCTTCAGTTGTCTTGCTCTGTAAATTTCGGCCCCCAAATCCGTTTG
TGCTGGCTTCGGTGTTTGGATCCTATTTTGTGTTGCCTCCAGTGTGTGGTGGATTCAAACCAAATCCCACTGTGTTTGGC
TTCTGTGTTTGGTGGATAGAAATCAAATCCTATTTTGTGTTGGTTTCAGTGTTTGGATTCAAA-CCAAATCCTATTTTAC
GTT-GCTTCAGTGTTTGGTGGATTCAAACCAAATCCTATTTGTGTTGGCTTCAGTGTTTGGTGTATTCAGGCTGAGTAAG
CGCTCTTCTGCTGCTCCACCGTGATGTTAAACTTG-TAGTGCTGGAATGTTTTTGAACTATCTGTGACGTCAAACTTGTG
GAATGTGTGCCTCTGTGGGTCTGGTCTCTGGTGGAGAGCTGTTTGCTGCTTGCTGCTTTACTGAACAAGTGCATTTGGAG
AACTGTGTGAAAACACGATCATTTGTTTCGTTGTTACTTGTACGTTATCAAGTTATTAGTATTGCTTGTGAAGAAGACCT
AATTTCTATAGTGATTGGTGAAGGGTTGTTCATCC-----------------TACCCCGTAATTACTGTCGACTTCACTG
GCGAGTGGTGAATTTTGTTTAAGTTTGTTTTCCTGATCGATACAGCAGAGGGCAATTTTTAGCAGCGGGAATGACAGTTT
TTTTTTTT-GCCAGAACAGGCAAATTTTGTGCAAATATAACATACTAAAAATTCGCAGCAATTTCAGAATACCAAAGGCG
CTGAGCATTTACAGAAGCCTCGAACACATCTTTCA
>chr1D_3
GACTTT--CTTTGCGGCGATGACGCTAGGAACTAGTTCGCGGCACCGCCGACGGGATTGCTCCCCTAATGCAAGAAGCCT
AGATGTGGGCAACAAAACAACATGCAGATGTTGGTTTTTTGCCTGTTTTTCCTCGGCCAAGCTCAACTGAAACACAGATG
CAATACATGCAAAATCCATGTAAGCAAGCAAACACTCCCTAAGGGCGTGTTTGGTTGCCGCTGTCAACAGTTCCTGCATC
GCATGAACTTCTCAACCCAGCCTGGTTGAGCAAAAACAGGCCCTAATACGCCATATGCAACTTGATTGGTTGGCTGCATC
CCTAGTCCCTGCATTAGGTAATACGCAAGTGCACTTTGTTTGGTTGGCTGCATTGGCCCTAGCGGCACATGAACACGGCG
TTTGGTTGCATACGGCGTACATGTTGTGCTTACCTTGTACCCTAGTTGGTGAGCTTACCCACAATGATCACACCTAGCAC
ACCAACGCCACAACACAGCAATGGTGACGAACTGGGCGAAGATGATGAAGTTCTTCAGCTTCAGGCCGAATTGACGATCC
ACCTTAGCAACTTCCACTTTGACAACTCCAACCTTGGCATTGTCGACACTACTGCCTCCGTGCTTTCGCACCCAGGCGGA
GTAAGCTTGTTCTGTTGCCTGCTTAGTCTTGAACCCTCTATAGTTGCTGTTGCTATACGATGCCACTTGTGCATTGGCTT
CTTCCCATGAACTATAAACCCCTGGAACCTCATCAATGAACACGGCATACCACTTGCCCTAGCAATGCACAAGAGCAAGA
GTTGAAGCAGCAAATCAATGGAACACAAGTAGCAAGCAAAGTAGCAAACAACAATGGAGCAGAAGAGAAGTAAAGCATGC
ATGATCATACGGCATAACAAGTTCTTCCTAGCACTACCTTGGTGTTAACCTACCACCACATCCAAAAGAGGGTGTTGTCC
TACCACCGCAAGTTCACCATCACCGTGAGGGGTTAGTATATACCACCTCACCAAAATATACAGACCATCAAATAGTTTTT
GAGCCCTAGCTACACAAAATGTACATCGTCATCGTCATCGTCGTTGTCGTCGCCACCACCATCGCCGTCGGGGATCATGC
ACGCTCACAGGCAGCACTACTCTAGTAGTAGTGCTTGCCCAGCCAGCTCCTGAGCCACAGCACCCAGTGAGCGTCGGCCA
TGGCAACAAACCCAACACCCTGGGCCTTGTTGTCAAGCAGGTGGCTGAGAGCTGCCATGAGAGCCTCGTCGCTGAAGCCA
CCATGGGTCATGACAACGCCATACAGGTCAGGGTGGACGTCGAGGGGCTTGCACTCCCTGATGGTTGTTGCCACCTCCTT
CACCGCCTCAGTCATGCTGCAGAAGACATTGATCTCCTCCTCCATCAGGCCTCCTCTCTTCCTCTTCCTATCAACGGGGT
CAAATGGCTTGTCGAAGGGTTTCGCAGAGCGGGCTTGTCAGGGCCATCAAGGATCTCGACGTCCGGGGTCCCAGGGAAGT
CAGGCATGGGAGAACCAAGAGGCTCCCCCGAGCCCATGGCATGCTTCCCAGTTGCCAGCCCGAAGGAGAAGATGTGCTGC
ATCTGGTTGTAGTTCTGGATGGGTGTGTTGAGGAACTCAGCGTCCCTTGGGTGGTCCTAAGAATGAAACACAAGTGTTGT
TAGTTGCGATTAGGAGTAGGCAATGGTGGACAGTATGAAAAGGAAGAGGGCTGTGAGCTAACCGCGACATGGTCGGTGTA
GTGCTCTGCCTCAAGAACTATGGAGCAAGTGTTCTCATCCCATGAGGGCCCGCTAAGGTCTCTCAGCTTGGACACTTGGA
TCCATCGACTTCTCCACTTCCTCAGGTGGTTGTACACCTGGGTGGCAGACACCTCTTGCCCACAGAACTCGAACACCTGC
TTCGCAACGGTGTTCAAGTGCACCTCCTTGAAGCCCTTGTCAGTCCTAACTCCACTAGAGATGAGCTCACACATCTTGTT
CAGCACGAACGTGGACATGAACGGCTGCCACTTCATGTTGTTCGACCTACTATCCTTCTTTGCCTTTGTTGCTGCTAGCT
TGAGTGCAGTGGCAGCAGCAGTAGTTGGCTCAACGAGCACTACTGGCACATAGAGGGAATCAGACTCGAACACCTCTGAA
TCAGGTGCCATTTCGGACATAGGCTGCGAGTCCTCGACAAACGATGGAGCAAACTGGCTGTCGGACACGACAAGGGCCCG
ACTAAGATCTTGCGTCTGTGTGGTCATGTCCTACAATCGTAGCACGCATTGACAGTGAGTATAGCACACAACATACCGGA
CAATCCATGAAAGCAGGAGCATGCATGTACATGGTTCATCACTATCATAGCAAGCACATGACCACCAATAGCTACAAATC
ATAGATCTGAGCATGATTCAACACAAGCACAAGGTTCAACTTCAAACTCTACTACTAATCTAGCATACCAAATGCTTGAA
CATCTAGCCCTACCAGAAATTGTAACCGCAGCATAGCAACCAACCATATCAGCTCACAGATCAGACCACTAATCAACCAT
GCATCAAGATCAAACCCTAGTTGCAACTCAGATCTAGCTAGAAGGAACAGTGAGAAAGGGGGATTGAACTCACAGAGGCC
ATGGCTGCAGCTTGAGGACGAGGGGGGGGCGGTGGTGGAAGATGAACGCCGGCCGGTGAAGGAGCTCCGACGCCGTGGAC
AGCCGGCCGATGAAGATGCGCCGCTTACCTGCTCGCCGGTACCGATGCGCGTCGGCGGGAGAGCGCGAACGGAGGAAGAA
TGGTGGCGGGAGTTGGGGCGGTGAGGGAGGGGCTAAATAGGGGGTGGAGCGGCGGGAGGTGAGCCGAAATCCTCCCGCCG
ATTTTTCGGCGACGCGGGCGAGCTCGCACCATCTCCCCTGCTCGCACGAGGGGAGAAGCGCGTCGCCCTCCCCTGCCTCG
CCCTGGCCAGGCTCGCGAGCTACTGCCGAATCGTGCGTTGCCCCTGGGCCTGGGCTGGACGTGCTTTAAGCTTCGTGCGA
TGCGGGCCGCGCAATGAATGCAGGAAACCAAACGGGCCAAATTCTTTCCGCCCGGGCCAGGCTGGACCTCATGCGGGCAA
CCAAACACGTCCTAAGCAATGGGGGGATGAGAGCGCGACTGCACCCACGGGTTGGACCAAACCATAGACAAAAGTCCTTT
CGCTCCTGAGACATATTGTTTGAACAAAAGTTTGCTTTCCAACTGGAGAGGAGACATCTAACCAAATAGGAGAGGCCCG-
AAAAAAAAAGATAAATGACAACTAGCTACTTTGAAGGAACTTTTTTTTATTAGTTTGATCTACGTACATCCAAATGCTAT
CTGCTTCTTCACAGAAATTGATAGGCGAATACC-----------------------------------------------
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-----GTATGTTGCAAGAAGCAAAGGACCAATGATGGACGGACTGGATTGCAAGAAAC-AAACCCAAATGTTTCGAGCTG
CCGCCCGCGCTCCGCGCA-GAAATTTTAGAGCCACATCAGCGATCCCGCCAATCCACCGGCCCAAGCTATCGGCCACGTC
ACGGATCCGCGGCATCTCTCCCCCGGATCGCCATCTTGACCGTCCACTCCATCCGCATCGAACGGCAGGCACACGCCTCC
TCCGACGTCTCGTCCCCGTTAAAACGCCCTTCGCCCCTCCCCGCAAATCACAGCAGCAGCAGCCACCACCGTTCCTCCGA
TTCCACCACATCCGCTCGCAGCTCGA----GATCGTCAGCCATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAG
GGCGGTGCCAAGCGCCACAGGAAGGTTCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCG
GCGCGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGCACCCTCTATGGCTTCGGCGGCTAGGCCACCACCGGATA------------GTCGTTGTTTGGTACAGTACT
AGCAGTGTTCGTGGTCCTCGGGTCTGAAAAATCGCCGCATCTCGCTGCTGTTTGCCCTGGCCCTGTTTGTTGTCTGGATG
TACT--------AGGATGGAATGGAAATTGCAGCAGTTTACCCTTGAATTCGTCCCTGATA-TGTGGATCTGTTGATGTT
TGTTCATGCGCGTGGTCTGATATTACCAGTGCGTTCTTCAGTTGTCTTGCTCTGTAAATTTCAGCCTCCAAATCAGCTTC
GGATTTGG------------------------------------------------------------------------
--------------------------------------------------------------------ATCCTACTCTGT
GTTGGCTTCAGTGTTGGACTCAACAAATCCTAT-----TTTGTGTTGGCTTCAGTGTTTGCTGGATTCAGGCTGAATAAG
CGCTCTTCTGCTGCTCTATCGTGATGTTAAACTTG-TAGTGCTGGAATGTGTTT-AACTATATGTGACCTCACACTTGTG
CAATGTGTGCCTCTGTGGG-------TCTGGTGGAGAGCTGTTTGCTGCTTTG-------CTGAACAAGTGCATTTGGAG
AACTGTGTTAAAACATGAGCATTTGTTTTGTTCTTACTTGTACATCATCAAGTTATTAGCATTGCTTGTGAAGGAGATCT
ATTTTCTCTGGTGATTGGTGTAGTGTTGCTGTTCATCCTATTACTGCCAGTTTAACCCGTAATTGCTGTTGACTTCGCTG
GCGAGTTGTGAATTTTGTTTAAGTTTGTTTTGCTGATCGATACAGCAGAGGGCAATTTTTAGCAGCGGGCATGGCCGTTT
TTTTTCTGGGCCAGAACAGGTAAATTTTGTGCAAATATAACA--CTAATACCACGCAGCAATTTCAGAATGCCAAAGGCG
CTGAGCATTTACAGAAGCCTCCAACACATCTTTCA
>chr1B_647
GAATA---------------------------------------------------------------------------
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-----GTATGTTGCAAGAAGCAAAGGACCAATGATGGACGGACTGGATTGCATGAAAAAAAAACCAAATGTTTCGAGCTG
CCGCCCGCGCTCCGCGCATGAAATTTTAGAGCCACATCAGCGATCCCGCCAATCCACCGGCCCAAGCTATCGGCCACGTC
AACGATCCGCGGCATCCCTCCCGCGGATCGCCATCTTGACCGTCCACTCCATCCGCATCCAACGGCAGGCACACGCCTCC
TCCAACCTCTCGTCCCCTTTAAAACGCCCTTCGCCCCTGCCCGCAAATCACATCACCAGCAGCCACCACCGTTCCTCCGA
TT---CTACATCTGCTCGCAGCTCGAAGAGGATCGTCAGCCATGTCCGGCCGCGGCAAGGGAGGCAAGGGGCTCGGCAAG
GGAGGCGCGAAGCGCCACCGGAAGGTGCTGCGGGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCCCG
TAGGGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGTGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGATGCCGTCACCTACACCGAGCACGCCCGACGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGCACCCTCTACGGATTCGGCGGCTAGGCCACCACCAGATCAGTAGCCTGATAGTCGG----------------
---------------------GTGT----AGTCGCAGCATCTCGCTGCTGTTTGTCCTG-CCTTGTTTGTTCTCTGGATG
TACTTCTGTACTAGGATGGAATGGAAATTGCAGCAGTTTACCCTTGAATTCG-TACCTAGTCTGTGGGTCTGTTGATGTT
TGTTCGTGCGCGTGGTCAGATGTTACCAGTGCGTTCTTCAGTTGTCTTGCTCTGTAAATTTCAGCCCCCAAATCTGATTG
TGTAGGCTTCGGTGTTTGGATCCTATTTTGTG----------------GTGGATTCAAACCAAACCATATTGTGATTGGC
TTCTGTGTTTGGTGGATAGAAATCAAATCCTATTTTCTGTTGGTTTCAGTGTTTGGATTCAAAACCAAATCCTACTTTTT
GTTGGCTTCAGTGTTTGGTGGATCCAAACCAAATCCTATTTGTGTTGGCTTCAGCGTTTGCTGGATTCAGGCTGAATGAG
CGTTCTTCTGCTGCTCCATCGTGATGTTAAACTTGGTAGTGCTGGAATGTGTTTCAACTATCTGTGGCGTCAAACTTGTG
CAATGTGTGCCTGTGTTGG-------TCTGGTGGAGAACTGTTTGCTGCCTTG-------CTGAACATGTGCATTTGGAG
AATTGTGTTAAAACATGGGCATTTGTTTTGTTGTTACTTGTACATTATCAAGTTATTAGTATTGCTTGTGAAGGGGATCT
AATTTCTCTGGTGATTGGTGAAGTGCTGTTGTTCATCCTTTTATTGCCGGTTGACCGCGTATTTGCTGCTGACTTCGCTG
GCGAGTGGTTAATTTTGTTTAAGTTTGCTTTGCTGATCGATACAGCAGAGGGCAATTTTTA-------------------
---------GCCAGAACAGGTAAATTTTGTGCAAATATAACAAACTAATACTGCACAGCAATTTCAGAATATCAAAGGCG
CTGAGCATTTACAGAAGCCTCAAACACATCTTTCA
>chr1A_771
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--------------------------------------------CCCGCCAATCCACCGGTCCAAGCTTTCGGCCACGTC
ACCAGTCCGCGGCATCCCTCCCCCGGATCGCCATCTCGACCGTCCACTCCATCCGCATCCAACGGCAGGCAGATGCCTCC
TCCAACCTCTCGTCCCCGTTAAAACGCCCCTCGCCCCTCCACGCAAATCACATCACCAGCAGCCACCACCGTTCCTCCGA
TT---CCACATCCGCTCGCAGCTCGA----GATCGTGAGCCATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAG
GGCGGCGCCAAGCGCCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCG
GAGGGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGCACCCTCTACGGATTCGGCGGCTAGG----------------------------------------------
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>chr1A_771
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--------------------------------------------CCCGCCAATCCACCGGT-CAAGCTCTCGGCCACGTC
ACCGATCCGCAGCACCCCTCACCCGGATCGCCATCGTGACCGTCCATTCCATCCGCATCCAACGGCAGGCAGACGCCTCC
TCCACCCTCTCGTCCCCGTTAAAACGCCCCTCGCCCCTCCCCGCAAATCACATCACCAGCAGCCACCACCGTCCCTCCGA
TT---CCACATCCGCTCGCAGCTCGA----GATCGTCAGCCATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGCAAG
GGCGGCGCCAAGCGCCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCG
GCGGGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGCACCCTCTACGGATTCGGCGGCTAGG----------------------------------------------
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>chr1B_771
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--------------------------------------------CCCGCCAACCCACCGGTCGAAGCTTTCGGCCACGTC
ACCGATCCGCGGCATCCCTCCCCCGGATCGCCATCTGGACCGTTCACTCCATCCGCAACCAACGGCAGGCAGACGCCTCC
TCCAACCTCTCGTCCCCGTTAAAACGCCCCTCGCCCCTCCCCGCAAATCACAGCACCAGCAGCCACCACCGTTCCTCCGA
TT---CCACATCCGCTCGCAGCTCGA----GATCGTCAGCCATGTCCGGGCGCGGCAAGGGAGGCAAGGGGCTCGGGAAG
GGCGGCGCCAAGCGCCACAGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCG
GCGCGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTGAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACCGAGCACGCCCGACGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGCACCCTCTACGGCTTCGGCGGCTAGGGCCG------------------------------------------
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-----------------------------------
>chr1B_771
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--------------------------------------------CCCGCCAATCCACCGGTCCAAGCTTTCGGCCACGTC
ACCGATCCGCGGCATCCCTCCCGCGGATCGCCATCTCGACCGTGCACTCCATCCGCATCCAACGGCAGGCACACGCCTCC
TCCAACCTCTCGTCCCCTTTAAAACGCCCTTCGCCCCTGCCCGCAAATCACATCACCAGCAGCCACCACCGTTCCTCCGA
TT---CCACATCTGCTCGCAGCTCGAAGAGGATCGTCAGCCATGTCCGGGCGCGGCAAAGGAGGCAAGGGACTGGGCAAG
GGCGGCGCCAAGCGCCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGCCTGGCGCG
GAGGGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACTGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGTACCCTCTACGGCTTCGGCGGCTAGGTCCG------------------------------------------
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>chr1D_771
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--------------------------------------------CCCGCCAACCCACCGGTCCAAGCTTTCGGCCACGTC
ACTGATCCGCGGCGTCCCTCCCCCGGATCGCCATCTCGACCGTCCACTCCATCCGCATCGAACGGCAGGCACACGCCTCC
GCCAACCTCTCGCCCCCTTTAAAACGCCCCTCGCCCCTCCCCGCAAATCACAGCACCAGCAGCCACCACCGTTCCCCCGA
TT---CCACATCCGCTCGCAGCTCGA----GATCGTCAGCCATGTCCGGCCGCGGCAAGGGAGGCAAGGGGCTCGGCAAG
GGCGGCGCCAAGCGCCACCGGAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCG
GCGGGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCACGGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGCACCCTCTACGGCTTCGGCGGCTAGGGCCG------------------------------------------
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>chr1D_771
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--------------------------------------------CCCGCCAATCCGCCGGTCCAAGCTTCCGGCCACGTC
ACCGATCCGCGGCATCCCGCCCCCGGATCGCCATCTCCACCGTGCACTCCATCCGCATCCAACGGCAGGCAGAGGCCTCC
TCCAACCTGTCGCCCCCTTTAAAACGCCCTTGGCCCCTGCCCGCAAATCACATCACCAGTAGCCACCACCGTTCCTCCGA
TT---CCACAACCGCTCGCAGCTCGA----GATCGGCAGCCATGTCCGGGCGTGGCAAGGGAGGCAAGGGGCTCGGCAAG
GGCGGCGCCAAGCGCCACAGGAAGGTTCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCG
GAGGGGCGGCGTGAAGCGCATCTCAGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGACGCACCCTCTACGGCTTCGGCGGCTAGG----------------------------------------------
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>chr1B_773
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----------------------------------------------CGCCAATCCATCGGTCCAAGCTTTCGGCCACGTC
ACCGATCCGCGGCATCGCTCCCGCGGATCGCCATCTAGACTGTCCACTCCATCCGCATCCAACGGCAGGCACACGCCTCC
TCCAACCTCTCGTCCCCTTTAAAACGCCCTTCGCCCCTGTCCGCAAATCACAGCACCAGCAGTCACCACTGTTCCTCCGA
TT---CCACATCTGCTCGCAGCTCGAAGAGGATCGTCAGCCATGTCCGGCCGCGGCAAGGGAGGCAAGGGGCTCGGCAAG
GGCGGCGCCAAGCGCCACCGGAAGGTCCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCGGCTGGCGCG
GAGGGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAACGTCA
TCCGCGACGCCGTCACCTACACCGAACACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGC
CAGGGCCGCACCCTCTACGGATTCGGCGGCTAGG----------------------------------------------
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-----------------------------------
>SNPs
S-SSS-SS-----S---S---------------------------------S------------S-S-------------
-------------S------------S---------S------S------------------------S-----------
S-------S--------S--S----------------------SSSS---------------------------------
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---------------------------------S----S---------SSS-------------------------S---
---S-------------S----------------------------------S------------------------SSS
-----S---------S-----------------------S-SSS----SSSSSSSSSSS---------------------
------SSS-S-SSSSSS-SSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS-------S-----------------------------S-------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S----------------SS--SS--------------------S
-------S-----------SS-----------S-------------------SS--------------------------
----S-------------------------S--------S-----------------------S-S--S-----------
------------------------S-------------------------------------S-----------S-S---
--S-----------------------------SSSSSSSSSSSSSSSS----------------S-SS-S----S-----
------------------------------------S-------------------------------------S---SS
-----------------------S------------------------------------S--S-----------S----
------------------S-------------------------------S---S-------------------------
S------------------SSSSSSS-------------------------SSSSSSSSS--------------------
--------S------S--S---------S--------------S-----------------------------S---S--
-------S-S-------------S------SS--S-----------------------------S----S------S---
-------------------------------S-------------------------------------S---S-S----
-----S-S------------S---------------------S-----S-S-S---------------------------
---------------------S-------------
>forward_3530
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----------------------------------------------------------------------TTTGTACTCC
CGTCGCAGTC----------------------------------------------------------------------
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-----------------------------------
>reverse_4505
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------------------------GCCAGTGCGTTCTTCAGTTG------------------------------------
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-----------------------------------
