>input_sequence_84136
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ATGCAGGCTCAGCTGAAGGATCTCTCTATGCTTTTGATGGCA
TTCTTCTTTGCTATCACAACACCCGCCGGGATCGCTGCAGGTTCCGCCATGGCATCATTCTACGACCCGTACAGCCCCCG
TGCGTTGGTGGTGGAGGGTATTCTTAATGCCACGTCGGCTGGTATACTGATCTATATGGCACTGGTGGATCTCATCGCGG
CTGATTTTCTTGGCCGGAGGATGAGCAACAGCCCAACCATCTTGCAGGTTGGCGCATATGTCTCCCTGTTTCTTGGGGCC
CTAGCTATGGCATCCCTTGCAATCTGGACTTAG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr7D_1_TraesCS7D01G413400
TTCAAATATATACAGTCAAATGTTTATGTTAACACTGTCTTCTAGTAGGAAGTAAGAGTTATTCGCAAAAAAAGAGTAGG
AAGTAAGAGTTTAGTTAGTATGGGATTTTCACTATATAACGAATAGGTAAACATGTGTCACAACACTAATACTCATCACT
TAAGCTAGTGCAGTGGTATACGAGGAAATAATGGTCAAGACTAATTAATAAAGCTAGCTTAGTATTTGTTTGATACATAT
ACTTATTCATTTCTTTATATTATTTTCACTCCAACATGTCATCCTACTATGAGTAGTGTGCATGCTTTTACTTGACAACT
GTTTTTTATTTGAAAAATTGTAATTTTTATTAAGTTTTAATCACCAACATGTCATACCATGGATCTAGAGTTGCGCATAC
TGAAAGGAGAGCAGCTCACGTTGTTTTTCATCAGGGTAAATAGTATGTCACTATTGTTCCTAAACCC-------------
----------------------------------------------TAACTCCAAATTTTCTTATCTTATAACCTATTTT
TTTGTTTTTCTTA----------------------TACCAAATTTTACGTAGTGAATCAATATGAATATA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ACTATTTGTATTCCAAACGTAATTTGTTTATGAAGCGATTTTAAGATTACC
TCGGGTGCAGAATAACTTATTCTGCACCCTGGGTGATGAATAA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TCATTTGCTGC
ACGTATGGCCAACCTTCAAGATTTTGGAACTTGGAATTGTATCACACTCAGTGATCATCAGGCTATCACTGGGTGTTTCG
CAGAGCACGTGTACCATCAAGCGTCTGGTTGCTGCCCTT------CACCAGTTCTTTGAGGGTTTCGCACTGGGGTGACT
GCATTTCTCAGGTTAATTAACTATCTCCATTTTCCCA-AATCATGTTTAAGTGTGGTCTTTCAGAAAATGAAAAGATGA-
----TTTTTCAAAGCCTTTGTATTGTAATTGAGATGTACCTGCTCAACCAATAATAGTACGTATGTGCTAAACATAACAG
TTCCTCACTTTAAGCAAGGTATGTCATGAAACAAATCTATGCAGGCTCAGCTGAAGGATCTCTCTATGCTTTTGATGGCA
TTCTTCTTTGCTATCACAACACCCGCCGGGATCGCTGCAGGTTCCGCCATGGCATCATTCTACGACCCGTACAGCCCCCG
TGCGTTGGTGGTGGAGGGTATTCTTAATGCCACGTCGGCTGGTATACTGATCTATATGGCACTGGTGGATCTCATCGCGG
CTGATTTTCTTGGCCGGAGGATGAGCAACAGCCCAACCATCTTGCAGGTTGGCGCATATGTCTCCCTGTTTCTTGGGGCC
CTAGCTATGGCATCCCTTGCAATCTGGACTTAGTTAGTGTTGGTGATTGGTGTGAGTATCTATACATACTTGAAATGACT
-GAGATGAAAAATAAGATGAAGGATTGGAGTTGTAGAAGCTGGATGTACACATGGCATTCAATGCACTAGGAGTTGCTCT
ATAGTCCCTTGGAGAAATGGAGAAGCTGCTTCTTTTTTCGTTGGTTCTTTTGTTTCTTGTTCTTGACATGGTAGTGGTTG
GATGTAAAGGTGCCTTTGTTGGTAATAAACAACAAAGTCCCTCTTTGTGATGCATTGTGAATTTGTGATGGATGGTGACA
CAGGAGATGAATTAGTACCGGGGATGAGGAGCTCCAGGAACTGACTTTGTTCAAGTCACTAGCTCACATTTGAAATCGT-
AATTATGCCACAAGTTCACTGCACGGATCCAAAGTGTGACGCAACCTACTCCATCTGATTGCACCTCCATGCGGTGATTC
TGGTTTCATCTCCTGCCGTCACCCCCCATAAACTCATCGTGATATAGTGCATTGGTTTTTGGTTTGAACTGCTATTTCGA
CTTCGTTTGGAGCGCATGCAGTTCAATTGTTCCTCTTGTATCTTTCCTTCATTTTAATAGTTAATTAAAATCCATTAAAA
ATGAATAATACATTCCCTTTTAAACCTTTATTTTTGAAATTATTGTGAAGAGTTAATTGCTATAATGAATAGTACTGAAC
TATGTGTCATTCTCATTCATGATGTTCACATATTTATGCAATCCCCAGAGGGGCTGTTCCAAGAAGAAGAGAGGGGGAGA
GGACCTTACTGCAATAAGTAAACCCAACTAACCACATATTAATTTACTCTTAACACTTCACCTAATCACCTCCTATCCTT
GTTGTCATACACCATCTTGTTCAAAGTCTCCTCGAAGAACCATGTAGGGAAAATATATATGTGAGGAGATATACATAACT
GGCCATGAAAAACTCCTTCCAAAAACCAAGTGAGAATATAAGGAGAAAATGACATATCATAATACTTGTATTATT
>chr7A_376
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------ACCATGGATCTAGAGTTGCGCATAC
TGAAGGGAGAGCAGCCCACGTTTTATTTCATCAGTGTATATAGTATGTCACTATTATTCTCACAAAAAAGTACTACATTC
GTATAGAATCTCCACCATTATGATATGTTAGATTCGGATTGACAAATACCAACCATTATACTTATTTTCCAAGGTATATG
GTGAGTGGAGGAATGTTTCTCGTACTTCACAAAACTACTCAAATTAAACTGATGCATTAATTTGAATTAATTGCAATGCA
TGCATGCTTGTCGACTAGATGAGTAGGAATATTACATGCATTGGTGTGTTCCTTTTTAATTCTTGCATGCAGTGATTTAA
TGGCCCCCGGAATCTTCAAATGAGATTGAGATGAGCCCTTTAAATTGAGACAAGCCCTATAAACCGGAAAGGATGGAGTA
CTAGATTATTGTGAGGATCGATGTACAACTAAGGAAATTAAATGAAGACCATGATTAATTAAGGGCCTAGATACTTTGAA
TTCGTCAAATCCTTGCTCTTTATTGTTAGCAGTATATACTACCATCTGGAACCTTGTCAGTTTAAGCACGTACTGCTTAT
AGGCTCCACTTCTAACTTTTTGAATCGATAATAGTTGTGATACAAAATTGATTTTACTTTCTAGAGAAAAGGTAGTGCTT
CTTAGAAGATCTTATTTACTATATGTCTATATATGTAGCTGTATTTACCATAAATCTCTTTCTTTGAGCGAATACATCTG
TATTTAGTACTGCGTTAATGTAGCCAGCCATATGATCAATAGAAAATATATTTTAGGTGATGTGGACTATGTTAATCAAG
CCAGTCATATGATCAATGAAAAAAATATTTTAGCTGGTGTGTGGATTAATACAATGGCCTATTTTCATGTGGTTTAATAA
TGTAATGAATGGCCAACCTTCAAGATTTATAGTCATTTGATGCATGTATATATGCCTAATTATTTATAGTCATTTGCTGC
ATGTATGGACAACCTTCAAGATTTTGGAACTTGGAATTGTATCACACTCGGTGATCATCGGGCTATCACTAGGTATTTCG
CAGAGCACGTGTACAATCAAGCCTCTGGTTGCTGCCCTCTCCTTCCACCAGTTCTTTGAGGGTTTTGCACTGG-GTGACT
GCATTTCTCAGGTTAATTAACTATCTCCATTTTCTCCTAATCATGCTTAAGTGTGGTCTTTCAGAAAATGAAAAGAGGTG
TGTTTTCTTCAAAACCTTCGTATTGTAATTGAGATGTACCTGCTCAACCAATAATAGTAC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr7A_940
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TACATATGTGCTAAATATAATAG
TTCCTCACTTTAAGCAAGGTATGTCATGAAACAAATCTACGCAGGCTCAGCTGAAGGATCTCTCTATGCTTTTGATGGCG
TTCTTCTTTGCCATCACAACACCCGCCGGGATCGCTGCAGGCTCCGCCATGGCATCATTCTACAACCCGTACAGCCCCCG
TGCTTTGGTGGTGGAGGGTATTCTTAATGCCATGTCGGCTGGTGTACTGATCTATATGGCACTGGTGGATCTCATCGCGG
CTGATTTTCTTGGTCGGAGGATGAGCAACAACCCGACCATCTTGCAGGTTGGTGCATATGTCTCCCTGTTTCTTGGGGCC
ATAGCCATGGCATCCCTTGCTATCTGGACTTAGT----GTTGGTGGTTGGTGTGAGTATCTATACATACTTGAAATGACT
AGAGATGGAAAATAAGATGAAGGATTGGAGTTGTAGAAGCTGGACGTACACATGGCTTTCAATGCACTAGGAGTTGCTCT
ATAGTCCCTTGGAGAAATGGAGAAGCTGCTTCTTTTTTCGTTGGTTCTTTTGTTTCTTGTTCTTAACATGGTAGTGGTGG
GACGCAAAGGTGCCTTTGTTGGTAATAAACAACAAAGTCCCTCTTTGTCATGCATTGTGAATTTGTGATGGATGGTGATA
CAGGAGATGAATTAGTGTTGGGGATAAGGAGCTCCAGGAACTGACTTTGTTCCCGTCACAAGCTCACATTTAAAATCGGG
AATTATGCCACAAGTTCACTGCACGGATCCAAAGTGCGACCCAACCTACTCCATCCGATTGCACTTCCATGCAGTGATTC
TGGTTTCATCTCCTACCGTCACACCC-ATAAACTCCTCGCAATATAGTGCATTGGTTTTTGGTTTGAATTGCTATTTCGA
CTTCGTTTGGAGCGCATGCAGTTCAATTGTTCCTCTTGTATCCTTCCTTCATTTTAATAGTTAATTAAAAATGAATTTT-
-------ATATATTCCCTTTTAAACCTTTATTTTTTAAATTATTGCAAAGAGTTAATTGCTAGAATGAATAGTACTGAGC
TATGTGTCGTTCTCATTCATGATGTTCACATATTTGTGCAATCCCCAGAGGGGCTGTTCCAAGAAGAAGAGAGGGGGAGG
GGACCTTACGGCAATAAGTAAACCCAACTAACCACATATTAATTTACTCTCAACACTTGCCCTAATCACCTCTTATCCTT
GTTGTCATACATCATCTTGTATAAAGTCTCCTCCAAGAACCATGCAGGGAAA----ATATGTGAGGAGATATACATAACT
GGCCATGAAAATCTCCTTCCAAAAACCAAGTGGGAATATAAGGAGAAAACGACATATCATAATACTTGTATTA--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
----S----------S------S-S---------S---S----------------S---SS-S-SSS-------------
------------------------------------------------S-SS-S-S-S-S-----S--SS--SS---S-S
S-SSS-SSSSSS--------------------------SS--S--S-SS-SS--S--S---S-----SS-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S--S----SS-S----SS-S----SSS-S-SS--S--SSSSSSSS-SSSS
SSSS-SSS-SSS--SS-SS-SSSSSS-SS-SSS--SS-SSSS--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------S----------------------------------------S---------S----------S---S-----
--------------S-------S---------------S--------------------------S-------S------
----------------------------------S-S--------S------------------------------S-S-
------S------S----S-----------------------------------------S-----------S----S--
---------------------------------------S---------------------------------------S
-----------S-----------------------------S---------------------S----------------
---S----------------------------S----------S------------------------------------
-------------S----------------S---S-----------------S---------------------------
S----S--------------S-------------SSSS-------S----------------------------------
-------S------------------------------------S-----------S-----------------------
----------------------------------------------------------------S-------------S-
--S-S-------------------------------------------S-----------------------------S-
----------------SSS------S--------------------------SS-----S-----------S------S-
------------------------------------S---S--------------S--------S-------S-------
--------------S-------S---S--------S---SS---------------------------S-----------
------------------------------------------S---------------------------SSS-S-SSSS
SSSSSSS---S------------------------S---------SS---------------S---------------S-
--------S--------------------------S-------------------------------------------S
---------S----------------------------------------S-------SS------------S-------
-----------S--------SS-----------S----------S-------SSSS------------------------
-----------S--------------------S----------------S-----------------------SS
>forward_423
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AAGGAGAGCAGCTCACGTTG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_2465
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CTCCATGCGGTGATTC
TGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
