>input_sequence_84116
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------ATGAAGTCCGA
CGTCTGCTCCTTCGGCGTCGTGCTCTTCGAGGCGCTCATGGCGCGGCGCCCGGAGATGCTGACTGGGGACCAGGCCGTCG
GCCTCGCCGAGCACGCGCTGGCATGCCACCGGAGCGGCACCCTGCCGGACGCCGTCGACGCGGCGATCAAGGACCAGGTC
GCGCCGGAATGCCTTGAGAAGTTCGCTGAGACCGCCGTGGAGTGTCTCGCGCACCAAGGCACGGAGCGGCCGGCCATGGG
CGACGTGCTATGGAACCTAGAGTTGTCGATGCAGCTGCAGCTGATTAATCCCAATAAGACGTAG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr6A_1_TraesCS6A01G321800
CGTAGGAACTTTTGCCCGTCACGGACAGCCCAGGTGTGCCGGAGATTTCCTTGAA-GTCTCCAGCGATGGCGCCACCGGT
CTCGCCTCGCGCACGCATGGCGCACCTACACGCACGGCTGCACGCCTGCACCCCATGCCAATGCCAGACTGATTCGCCCA
TGCAGATGCACAGGACTAGGTACCCAGCC----GCCAAACGCTCCCCAACACC---------CGCGCTCGTCTCTTCAAC
TCGATCACTCCTCCCTGCCTAACACTAACTGATCACCGATCTCCAAAATAAATGACTCAACTTTGTACTAACTTTAATAT
GAAGTTGGGTCATCTATTTTGGAACGGAGGAGTACGTCCGATGCATGTGTTGGCGGCGGCCATGGGCGGCGCCGCCGCGG
CCATCTGTTGCGTGGCGATGGCGGCATACCTGTACGTCCACAAGAGGAACAAGAAGAAGAGGAAGGGGGAACTCAACAAC
GCCGAGTGGCTGCCGGAGTACCGCTCTCCCGCCCCCC---GCGGCGGCGGCAGGTCGTTCTCGCTGGCCGAGATCAAGGC
GGCGACCCAGAACTTCAGCGAGGCGCAGGTGGTCGGCGCGGGCAGGCAGGGGAAGGTGTTCCGCGGCGTCGTGGACGGCG
GCACCGCGGTGGCCATCAAACTGGCCG---GCCCGTCGCCGGGCCGGAGCGCGCGCGAGCTCCGGGCGGAGATCGAGGCG
CTGTCCGACCTGCGGCACCGGCACCTCGTCCCGCTCCTGGGCTTCTGCTCGGACAGGGAGGAGACCATCCTCGTGTACCG
GTACATGCCGCGGGGCACGCTGCAGCAGCACCTGCGCGCCG---------AGCCGGCGATGCCGTGGTGGCGCCGCCTCG
ACGCGTGCATGGGCGCCGCGCGGGGCCTGCACTGCCTGCACGCCGGCGGCGTCGTCCACGGCGACGTCAAGGCCACCACC
GTCCTCCTCGACGAGAACTGAGTCGCCAAGCTCTCGGACTTCGGCCTCTCCAACTCCAAGGACGCCACGATGAAGTCCGA
CGTCTGCTCCTTCGGCGTCGTGCTCTTCGAGGCGCTCATGGCGCGGCGCCCGGAGATGCTGACTGGGGACCAGGCCGTCG
GCCTCGCCGAGCACGCGCTGGCATGCCACCGGAGCGGCACCCTGCCGGACGCCGTCGACGCGGCGATCAAGGACCAGGTC
GCGCCGGAATGCCTTGAGAAGTTCGCTGAGACCGCCGTGGAGTGTCTCGCGCACCAAGGCACGGAGCGGCCGGCCATGGG
CGACGTGCTATGGAACCTAGAGTTGTCGATGCAGCTGCAGCTGATTAATCCCAATAAGACGTAGCAACGAGCCATATTGG
TGTACAGCAAAATCAAATTATTTTCCCACTAGCAG----------TAGCAGCACAGCCAGGTGCGCCCGCCATAGTTCAT
GCCCTAGAAGAGCTCTCAGATGAAAATGTAAATCATTGCAAATTGCAATGCGATGGTTCGGGTTTTTGAGTTAAAAGATG
ATGGATATGAAAGAGAGAAAAAAAAGATGTAGCAGCACAGCACATGAACTTATTTGAGCAATGGCATGAACTTTGTCAGC
TCTAACTTATTTGAGCCACTTGAACTTGTCATAAAACAATCTGTCGGGTGCAATAACCATCCGGACAACAGCTACAAGCT
CTGGATACCAAATGCATATCTACATTGGTAACCCTGGTCTTTGAGGAGATCTCGTCAGCAGGAACTGCTCAACACATGAT
GCAAAGCAAAGTGATCCTGAAGATATAAATCATATGTCACCCGTTTACGTTGCCATGAGCATGGGATTTCGTGGTGAGTC
TTATGGGCACTTTTCTGATCTTGTGATGCTTGGTCTTCAGTGTGTCTCGACGGAGAAAGAAACCTACGGGTGCCAATGTC
TGAGGAAATTTTGCGCGGAAGCAAGGCATAAAGTGTTTATCTATGCAAGAATAGGTCATTGAACCCGATAAGGCCCCTGA
GAGAGAAAATGGGCAAATAGTGGAAGAGGACGTTTTGGCTCCCGGAAGCATTTCTGAAATTATTTATTTTGATGTTTTTG
TTAGTGTCGCAAGCATGCTTGACAATTTTCATACGAAACAGAGCAATGGTGTTTCGTCAATGAAAAAACAAATTTGGGGT
AACATTTGGTGTTCAAATTAATATATTTTTTGCATAGGCCAAAATGTTTAACCTTTTTTGCCTAAAACTTTGAAGGTAGC
ATTTGGATGTTAATACATAAAAATGTTGTTGAGATTTCTTTTGACATTACAAAATTCATTTTTCACGCATGAGGCAAATT
GGATTTCCAGAAAAGAGTATCCTTTTGTTCTCCC
>chr6B_1
CGTAGGAACTTTGTCCCGTCACGGACAGGCCAGACGTGCCGGAGATTTCCTTCAAAGTCTCCCGCGATGCCGCGATCGGT
TTCGCCTCGCGCACGCATGGCGCACCTGCACGCACGGCTGCACCCCGT--------GTCAATGGCAGACTGATTCGCCCA
TGCAGATGCACAGGACTTGGTACC----C----GCCAAACGCTCCCCAACACC---------CGCGCTCGTCTCTTCAAC
TCGATCGCTCCTTTCTGCCCAAGACTAACTGACCACCGATCTCCCTG-----TGCACTGCCGCACCGAC-----------
-------------------------------GTACGTCCAATGCACGTGTTGGCGGTGGTCATGGGCGGCGCCGCCGCGG
CCATCGGTTGCGTGGCGATGGCGGCATACCTGTACGTCCACAAGAGGAATAAGAAGAGGAGGAAGGGGGAGACCAGCACC
GGCGAGTGGCTGCCGGAGTACCGCTCTCCCGCCCCCC---GCGGCGGCGGCAGGTCCTTCTCGCTGGCCGAGATCAAGGC
GGCGACCCGGAACTTCAGCGAGGCGCTGGTGGTCGGCGTGGGCAGGCGGGGGAAGGTGTTCCGCGGCGTCGTGGATGGCG
GCACCGCGGTGGCCATCAAGCTGGCCG---ACCCGTCGACGGGCCGGAGCGCGCGCGAGTTCCGGGCGGAGATCGAGGTG
CTGTCCAACCTGCGGCACCGGCACCTCGTCCCGCTCCTCGGCTTCTGCTCGGACAAGGAGGAGACCATCCTCGTGTACCG
GTACATGCCGCGCGGCACGCTGCGGGAGCACCTGCGCGGCAAGAGCGGCAAGCCGGTGATGCCGTGGTGGCGCCGCCTCG
ACGCGTGCATGGGCGCCGCGCGGGGCCTGCACTGCCTGCACGCCGGCGGCGTCGTCCACGGCGACGTCAAGACCACCACC
ATCCTCCTCGACGAGAACTGGGTCGCCAAGCTCTCGGACTTTGGCCTCTCCAACTCCAAGCACGCCACGATGGAGTCCGA
CGTCTACTCCTTAGGCGTCGTGCTCTTCGAGGCGCTCATGGCGCGGC---CGGCGCTGCCGCCAGGGGACCAGGCCGTCG
GCCTCGCCGAGCACGCGCTCACATGCCACCGGAACGGCACCCTGCCGGACGCCGTTGACGCGGCGATCAAGGACCAGGTC
GCGCCGGAATGCCTTGAGAAGTTCGCTGAGACCGCCGTGGAGTGCCTCGCGCACCAAGGCACGGAGCGGCCGGCCATGGG
CGACGTGCTATGGAACCTAGAGTTGTCCATGCAGCTGCAGCTGATTAATCCCAAGAGGACGTAACAAGGAGCCGTATTGG
TGTACAGCAAAATCAAAATATT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr6B_1
CGTAGGAACTTTTGGCCGTCACGGACAGGCCAGGTGTGCCGGAGATTTCCTTCAA-GTCTCCCGCGATGGCGCGATCGGT
CTCGCCTCGCGCACGCGTGGCCCACCTGCTCGCACGGCTGCACCCCGT--------GTCAATGGCAGACTGATTCGCCCA
TGCAGATGCACAGGACTTGGTACC----CAGCCGCCAAACGCTCCCCAACACCTGCGCTCGGCGCGCTCGTCTCTTCAAC
TCGATCGCTCCTCTCTGCCTAAGACTAACTGACCACAGATCTCCCTCTGCACTGCACTGCTGCACCGAC-----------
-------------------------------GTACGTCCGATGCACGTGTTGGTGGCGGTCATGGGCGGCGCCGCCGCGG
CCATCGGTTGCGCGGCGAAGGCGACATACCTGTGCGTCAAAAAGAGGATTAAGAAGAAGAAAATGGGGGAGACTAGCAAC
GGCGAGTGGCTGCCGGAGCACCGCTC------------------------------CTTCTCGCTGTCCGAGATCAAGGC
GGCGACCCGGAACTTCAGCGAGGCGCTGGTGGTCGGCGTGGGCAGGCGGGGGAAGGTGTTCCGCGGCGTCGTGGACGGCG
GCACCGCGGTGGCCATCAAGCGGGCGG---ACCCGTCGCCGGGCCGGAGCGCGCGCGAGTTCCGGGCGGAGATCGAGGCG
CTGTCCAACCTGCGACACCGGCACCTCATCCCGCTCCTCGGCTTCTGCTCGGACAGGGAGGAGACCATCCTCGTGTACCG
GTACATGCCGCGCGGCACGCTGCGGGAGCACCTGCGCGGCGAAAGCGGCAAGCCGGTGATGCCGTGGTGGCGCCGCCTCG
ACGCGTGCATGGGCGCCGCGCGGGGCCTGCACTGCCTGCACGCCGGCGGCGTCGTCCACGGCGACGTCAAGGCCACCACC
GTCCTCCTCGACGAGAACTGGGTCGCCAAGCTCTCGGACTTCGGCCTCTCCAACTCCAAGCACGCCACGATGAAGTCCGA
CGTCTACTCCTTAGGCGTCGTGCTCTTCGAGGCGCTCATGGCGCGGC---CGGCGCTGCCGCCAGGGGACCAGGCCGTCG
GCCTCGCCGAACACGGGCTGGAATGCCACCGGAACGGCACCCTGCCGGACGCCGTCGACGCGGTGATCAAGGACCAGGTC
GCGCCGGAATGCCTTGAGAAGTTCGCTGAGACGGCCGTGGAGTGTCTTGCGCACGAAGGCACGGAGCGGCCGGCCATGGG
CGACGTGCTATGGAACCTAGAGTTGTCGATGCAGCTGCAGCTGATTAATCACAAGAGGACGTGACAAGGAGCCGTATTGG
TGTACAACAAAATCAAATGTTCGTCGTGTCGTGGTTTTGGTGCTATAGCAGCACAGCTAGGTGTGCCCACCATAGTTCAC
G-CCTAGAAGAGCTCTCAGATGAAAATTGTAAATC------ATTGCAGTGCGATGGTTCAGGTTTTTGGGTT-AAAGATG
ATGCATATGAAAGAAAAAGG-AAAAGATGTAGCAGCACAACACATGAACTTTTTTGAGCAATGCCATGAACTTTTTCAGC
CCTAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr6D_63
---------------------------------------------------------------GCGATGGCGCGATCGGT
CTCGCCTCGCGCACGCATGGCGCACCTGCACGCACGGCTGCACCCCGT--CCCCGTGTCAATGCCCGACTGATTCGCCCA
TGCAGATGCACAGGACTAGGTACC----CAGCCGCCAAACGCTCCCCAGCACC---------CGCGCTCGTCTCTTCAAC
TCGATCACTCCTCCCTGCCTGACACTAACTGACCACAGATCTCCCTCTGCACTGCC-----GCACCGAC-----------
-------------------------------GTACGTCCGATGCACGTGTTGGCGGCGGTCATGGGCGCCGCCGCCGCGG
CCATCTGTTGCGTGGCGATGGCGGCATACCTGTACGTCCACGAGAGGAACAAGAAGAAGAGGAAGGGGGAACTCAACAAC
GGCGAGTGGCTGCCGGAGTACCGCTCTCCCGCCACCGGCGGCGGCGGCGGCAGGTCGTTCTCGTTCGCCGAGATCAAGGC
GGCGACCCGGAACTTCAGCGAGGCGCAGGTGGTCGGCGTGGGCCGGCGGGGGAAGGTGTTCCGCGGCGTCGTGGACGGCG
GCACCGCGGTGGCCATCAAGCTGGCGGCCGACCCGTCGCCGGGCCGGAGCGCGCGCGAGTTCCGGGCGGAGATCGAGGCG
CTGCCCGACCTGCGGCACCGGCACCTCGTCCCCATCCTCGGCTTCTGCTCGGACAGGGACGAGACGATCCTCGTGTACCG
GTACATGCCGCGCGGCACGCTGCGGGAGCACCTGCGAGGCAAGAACGGCAAGCCGGCGATGCCCTGGTGGCGCCGCCTCG
ACGCGTGCATGGGCGCCGCGCGGGGCCTGCACTGCCTGCACGCCGGCGGCGTCGTCCACGGCGACGTCAAGGCCACCACC
GTCCTCCTCGACGAGAACTGGGTCGCCAAGCTCTCGGACTTCGGCCTCTCCAACTCGAAGCACGTCACGATGAAGTCCGA
CGTCTACTCCTTCGGCGTCGTGCTCTTCGAGGCGCTCATGGCGCGGCGACCGGCGCTGCTGACTGGGGACCAGGCCGTCA
GCCTCGCCGAGCACGCGCTCGCATGCCACCGGAACGGCACCCTGCCGGACGCCGTCGACGCGGCGATCAAGGACCAGGTC
GCGCCGGAATGCCTTGAGAAGTTCGCTGAGACCGCCGTGGAGTGCCTCGCGCACCAAGTCACGGAGCGGCCGGCCATGGG
CGACGTGCTATGGAACCTAGAGTTGTCGATGCAGCTGCAGCTGATTAATCCCAAGAGGACGTAACAACGAGCCATC---G
TGTACAGCAAAATCAAAT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>SNPs
----------------------------S-----------------------S---------S----------S-S----
---------------------------S---------------S--SSSS----S--S----------------------
------------------------SSSS----------------------------------------------------
--------------------------------S-----------SSSSSS-S--S-SSSS-SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S-------------S--------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------S-----------------------------S--------S--------------------------------
-------------------S----------S----------------------------S--------------------
--------------------------------------S-----------------------------------------
------------S----------S-S------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------S---------------------------------------S-------------------
-----S------------------------------------------S----S-S------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-S------S----------------
----------------------S--SSSSSSSSSS----------------------S-----S----S----------S
-S-------------------------SSS--SSSSSSSSS------S-----------S--------S---S-------
---S----------S-S-SSS------------------S-----------S-----------S----------S-----
S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_186
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TGCACAGGACTAGGTACCCA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_1908
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GGGTGCCAATGTC
TGAGGAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
