>input_sequence_84086
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------A-------------------------------------------------------------------------
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-------------TGGCGGAGAGGGTGATGAGGCTGGCGTCGCAGCGCGCCGTGGTGATCTTCGGGGCGAGCAACTGCTG
CATGTGCCACGCGGTGAAGACGCTCTTCACCGAGATGGGCGTGAGCTGGACGGTGCACGAGCTGGACAAGGACCCCCGCG
GGAAGGACGTCGAGAGGGCGCTCGCCGGCATGGTTGGCCAGAACCCACCTGTGCCGGCCGTCTTCATCGGCGGCGCGCTC
GTTGGCCCCATCGACAAGGTCATGTCGCTGCACCTCGGCGGCCAGCTGGTGCCGCTCCTCCGCCAAGCCGGTGCCCTCTG
GCTCTGA-------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3B_1_TraesCS3B01G504700
GGCCGGCCTCCCGCCGCCTGCAGCCATCCGCTGCGCCGCAGATCCCAGATCGGTTGCACCACCACACGCCTTGGGGTCCG
CCCCACCCCGGAGACGCGCGGGAGAGGAGATCCCCCGCCACCGCCGTCGGCCCCCGGGCTTAGCCCGGCGGCGTCTTCCG
GCGGCGGCGGCTAGGTTTCTGGCCGCCCGAGTCACCCTAGGGGGAGGACGACGCGGGGGCATCTAGATGCGATCCAGTGT
GCCTTCTTGATTAAGCACTTGGTGCCGAATTTCCATGGTGTAGGACTTATTCTAAGGATATTCAAATGGTACAAAGGGGC
CCTTCACTATTCTTGAGTGCCTGCTGCTTTGTCGGCGTTGGAGATTCATTGCCTACTTATTCGTGTCGATTTATTCGGAC
CTCAACGTGGAGATTCGTGATGATGTTGCGCTGACTCATCAAGAATACAAAGTAGGTTGATTTTTTTTTTTTGCGAGAGA
ACAAAGTAGGTTGATTTATGAAGGGTTTTTAGGCTTTAGTTTAGCCCAGAGAAAACGTGATTCACGATATGCCCACTCCA
AATGGGCACGTATTCTTTGTCACACTGGAATGGCAAAAGAAGGCAATTAGAGTGG-------------------------
--------ATATTCAAACCTAGGTTATCTGGAATTCTAGGTTATTATTGATTGAACGTAAGTCAACTGAAGCATTGGATC
CGATCAATACTACCATCCATTTTTAACGTGCTAGAGAAATAACTAAAGTCTAGTCTATCTCGAATCTTAATTCACCTCCA
GTTTTAGTTATTCGATTCCACATCATTTAAACGTCATAGCACAAAGTTCACAGAGAACGCATATTCTGACCGACTCACAC
TTCTTCGATTTGCCCCATCATCATCTATAAATAGACACCGTTCAGTCACAACCATCATAAACCTCCAAAAGAAACAAACA
G-------------CTAGCTCAAGTAAAGCGAGCTGATCAGATCGTTCGATTTAGGTTCGTAGAGAAAGAGTTAGCAAGT
TGAGCAA-------------------------------------------------------------------------
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-------------TGGCGGAGAGGGTGATGAGGCTGGCGTCGCAGCGCGCCGTGGTGATCTTCGGGGCGAGCAACTGCTG
CATGTGCCACGCGGTGAAGACGCTCTTCACCGAGATGGGCGTGAGCTGGACGGTGCACGAGCTGGACAAGGACCCCCGCG
GGAAGGACGTCGAGAGGGCGCTCGCCGGCATGGTTGGCCAGAACCCACCTGTGCCGGCCGTCTTCATCGGCGGCGCGCTC
GTTGGCCCCATCGACAAGGTCATGTCGCTGCACCTCGGCGGCCAGCTGGTGCCGCTCCTCCGCCAAGCCGGTGCCCTCTG
GCTCTGAACTT-CTGAAGAATTAAGGACAGCAGTGG-------CTGATGTGCAC--------------------------
---------------------------------------------GTGCAGCTACATCATTTTGGAAAGGTCATCAAACA
TATTAACCGTAATGATCTTTCAGTTGTACCACTTGTTGTCATAGCACTGTAACAGAAAGAAAGGATGCTTTGTAAGAGAT
GGGCATTC-TGAGCAATATTAAATGAGCTTATGCTTATCTTGTCGTTGCTA----------A-ATTTGATGATTTGCTTA
ATTTAGCTGGCCGTTGAGCAAAG---------------------------------------------------------
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--------------------------------------------ACCGTGAGAGAATCCACGTTATATTCTCCCCGTAAA
AAAAATATAAGAGCGTAGTCATATATTTCTTTAGGGAGGGAATACATATAATTGGCACCGCATGTGGCTAGGATTCTTGA
TTGATTTAAGATACTGATGTTTGTGCTAACTTTCTTTTGCGGGAAAAACTTTCAATCTATTCATCGTCAATCATTACAGT
ACAACAAACACTAATAAAAATTACATTCAGATCATAGACCACCTAGCGACGACTACAAGCACTGAAGCGAGCCGAAGGCG
CGCTGCTGTCATTACTCCTCCCTTGCCGAAGCTGGGCAAACCTTGTTGTACTAGACAGTCGGGAAGTCGTTGTGCTAAGA
CCCCATAGAACCAATGCAACAGAACTGCAACCGCCACGGATGAAGAGTGTAGATCAAAAGGATCCACCCTGAAGACACAC
AAACGAAAACGAACAACGAACAGATCCGAGCAAATCCACCAAAGACAGATATGCCAGAGACACCTTCACACACCCACCGG
TGATGCTAGACGCATGACCGTAACGGGGACTAGACAGCAAGACCTTTATTCCATCTTCTGGGAGCCGCCGCCGTCTCACG
TTCCTGACTAATACGTCTCCAACGTATCTATAATTTTTATTGTTCCATGCTGTTATATTATCATTCTTGGATGTTTTACA
ATCATTTTATAGAAACTTTACATCATTTTTTGGGACTAACCTATTGACATAGTGCTCAATGCCACTTGTTGTTTTTTTG
>chr3A_240
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-------------------------------------------------------------------------------T
GCCTTCTTGATTAAGCACTTGGTGCCGAATTTCCATGGTGTAGGACTTATTCTAAGGATATTGAAATGGTACAAAGGGAC
CCTTCATTATTCTTGAGTGCCTGCTGCTTTGTCGGCGTTGGAGATTCATTGCCTACTTATTCGTGTCGATTTATTTGGAC
CTCGACGTGGAGATTCGTGATGATGTTGCGCTGACTCGTCAAGAATGCAAAGTAGGTTTATTAATAACGGGG--------
--------------------------TTTTAGGCTTTAGTTTAGCCCAGAGAAAACGTGATTCACG--ATGCCCACTCCA
AATGGGCACGTATTCTTTGTCACACTGGAATGGCAAAAGGAGGCAATTAGAGTGGATATTCTTTTTTTTTTGCGGGGAAT
TAGAGTGGATATTCAAACCTAGGTTATCTGGAATTCTAGGTTATCATTGATTGAACGTAAGTCAACTGAAGCATTGGATC
CGATCAATGCTACCATCCATTTTTAATGTGCTAGAGAGATAACTAAAGTTCAGTCTACCTCGAATCTTAATTCACCTCCA
TTTTTAGTTATTCGATTCCACATCATTTAAACGTCATAGCACAAAGTTCACAGAGAACACATATTCTGACCGACTCACAC
TTCTTCGATTTGCCCCATCATCATCTATAAATAGACACCGTTCAGTCACAACCATCATAAACCTCCAAAAGAAACAAACA
GCATAGATATATGGCTAGCTCAAGTGAAGCGAGCTGATCAGATCGTTAGATTTAGGTTCGTAGAGAAAGAGTTTGCAAGT
TGAGCAA-------------------------------------------------------------------------
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-------------TGGCGGAGAGGGTGAGGCGGCTGGCGTCGCAGCGCGCGGTGGTCATCTTCGGGGCGAGCAACTGCTG
CATGTGCCACGCGGTGAAGACGCTCTTCACGGAGATGGGCGTGAGCTGGACGGTGCACGAGCTGGACAAGGACCCCCGCG
GGAAGGACGTTGAGAGGGCGCTCGCCGGCATGGTTGGCCAGAACCCACCTGTGCCGGCCGTCTTCATCGGCGGCGCGCTC
GTCGGCCCCACCGACAAGGTCATGTCGCTGCACCTCGGCGGCCAGCTCGTGCCGCTCCTCCGCCAAGCCGGCGCTCTCTG
GCTCTGAACTTGCTGAAGAATTAATGACGGCAGTGG-------CTGATGCGTAC--------------------------
---------------------------------------------GTGCGGCTACATCATTTTGGAAAGGTCGTCAAACA
TATTAACGGTCATGATCTTTCAGTTTTACATCTTGTTGTCATAGTACTGTAACAGAAGGAAAGGATGCTTTGTAAGAGGT
GGGCATTC-TGAGCAATATTAAATGGGCTTATGCTTAACTTGTCATTGCTA----------A-ATTTGATGCTTTGCTTA
ATTTAGCTGGCTGCTGTGCTAAG---------------------------------------------------------
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--------------------------------------------ACCATGAGAGAACCAACGTTATA-------------
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>chr3D_660
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----------------------------------------------------GAACGTTAGTCAACTGAAGCATTGGATC
CGATCAATGCTACCATCCATTTTTAATGTACTAGAGAAATAACTAAAGTTCAGTCTATCTCGAATCTTAATTCACCTCCA
GTTTTAGTTATTCGATTCCACGTCATTTAAACGTCATAGCACAAAGCTCACAGAGAACACATATTCTGACCGACTCACAC
TTCTTCGATTTGCCCCATCATCATCTATAAATAGACACCGTTCAGTCACAACCACCATAAACCTCCAAAAGAAACAAACA
GCATAGATA----GCTAGCTCAAGTGAAGCGAGTTGATCAGATCGTTCGATTTAGGTTCGTAGAGAAAGAGTTAGCAAGT
TGAGCAA-------------------------------------------------------------------------
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-------------TGGCGGAGAGGGTGAGGCGGCTGGCGTCGCAGCGCGCGGTGGTCATCTTCGGGGCGAGCAACTGCTG
CATGTGCCACGCGGTGAAGACGCTCTTCACGGAGATGGGCGTGAGCTGGACGGTGCACGAGCTGGACAAGGACCCCCGCG
GGAAGGACGTCGAGAGGGCGCTCGCCGGCATGGTTGGCCAGAACCCGCCTGTGCCGGCCGTCTTCATCGGCGGCGCGCTC
GTCGGCCCCACCGACAAGGTCATGTCGCTGCACCTCGGCGGCCAGCTCGTGCCGCTCCTCCGCCAAGCCGGCGCTCTCTG
GCTCTGAACTT-CCGAAGAATTAACGACAGCGGTTG-------CTGATGCGTAC--------------------------
---------------------------------------------GTGCGGCTACATCATTTAGGAATGGTCGTCAAAGA
TATTAACGGTGATGATCTTTCAGTTGTACCTCTTGTTGCCATA-------------------------------------
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>chr3A_997
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--AGCAA-------------------------------------------------------------------------
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-------------TGGCAGACAGAGTGACGAAGCTGGCGTCGCAGCGGGCGGTGGTGATCTTTGGGGCGAGCAACTGCTT
CATGTGCCACACGGTGAAGACGCTCTTCACAGAGCTGGGCGTGAGCTGGACGGTGCACGAGCTGGACAAGGACCCCCGCG
GGAAGGACGTCGAGAGGGCGCTCGTCGGCATGGTCGGACGGAGCCCGCCGGTGCCAGCCGTCTTCATCGGCGGCAGGCTT
GTCGGCACCACCGACCAGGTCATGACGCTGCACGTCGGCGGCCAGCTCGTGCCGCTCCTCCGCCAGGCCGGCGCCCTGTG
GCTTTGAAGAGTCATGGA---CAGGGACAGCAGTGG-------CTGATGCGTGCGTGCAGTGATGTGTGATCGCAGCCTT
GAAATTGAGCTAAGATAGTGACCAT---GTAGTGCGTGCTCTGCAGTGCAGCTACATAATTTTGGAAAGGTCATCAAACA
TATTAACGGTTATGACCTTTCAGTTGTACCTCTTGTTGTCATGAAAAGAGT------AGAAAGGATGCTTTGTAAGAGAT
GAGCATCC-TGAGCAATATTGAAAGAGCTTATGCCTATTATCTTGTTGCCGTTGCTTAACTA-ATTTGATGCTTTGCTTA
ATCTGGCTGGCTGTTGTGCTAAG---------------------------------------------------------
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--------------------------------------------GCCGCAAGAGAATCCACGGTATAT------------
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>chr3A_997
AGCGATGGCGGACAGAGTGACGAATCTGGCGTCGCAGCGGGCGGTGGTGATCTTCGGAGCGAGCAACTGCTGCATGTGCC
ACGTGGTGAACACACTCTTCACAGAGCTGGGCGTGAGCTGGACGGTGCACGAGCTGGACAAGGACCCCCGCGGGAAGGAC
GTCGAGAGGGTGCTCGTTGGCATGGTCGGACGCAACCCGCCTGCGCCGGCCGTCTTCATCGGCGGCAGACTTGTCGGCAC
CACCGACCAGGTCATGATGCTGCACGTTGGCGGCCAGCTCGTGCTGCTCCTCCGCCAGGCCGGCGCCCTCTGGCTCTGAA
GAGTCAAGGCTCAAGGACAGCAGTGGCTGATGCATGCGTGCAGTTGTGTGTGATCGCTAGAGATCATATGGTGCGTGCAG
TGCAGCTACATAATTTTGGAAAGGTCATCAAACATATTAACGGTCATGATCTTTCAGTTGTACCTCTTTTTGTCATGAAA
ACAGTAGAAAGGATGCTCTGTAAGAGATAAGCATCCTGAGCAATATTAAAAGAGCTTATTCTTGTTATCTTGTTGTCGTT
GCTTAACTAATTTGATGCTTTGGGCGCAGGCTGGGCGCAGGCTGGGCGGCAGCGGCGTTTGACGCGTCGTCATCTTCCTG
AAGGTGCCGCCTTGGGTGAGTTGGGGGTGTGCAGGGGCGATGGGTGTGGTTGTCAAGTGTGTGGCGGCTTTGCAGGTGGA
GGTGGCGCCATGGTCTTCTTGTTGGGGCAGTGCTCTGCTGTTTGGTTGTCCGTTGCCTGACTTGTGGCTGTTTGCTCGCC
GGCTCTCAGTGCCATGGCATGGACGGGATGAAGATAGGGTTCTTTCCCCGTTGGCAGCAACAGGGCATGGAAGGCTTGAA
CTTGGTGCTGATTCCAGCGGGTGCTGTCCTGCTATCTGCATTGGCTGCCTTGGATCCTCTGCTTGCAAGTTCTTCTTCAA
CCTCGCTCAACAACAGCTTCTCTTCCTTGGGTGTGGGTTATTGTGTCTTGATGAGGCTCTTCGTTTGGTGTTCTTAGCGC
AGCAGGTGGGTCGTGCTGAGAATCTCCCATGGTGACCTGGAAGCTTGTACCAATCCTTGCTCAGGGGAACATTGCCACTT
GCCAATGGTACGGCGCCCTTCGATCCAGGGCGAGGAGCAGGGGTCCCCTTCGGAAGTGGAGAGGGTCAGTACGAGGACGG
CGTCCACCTATCGGAGTAGATGAGGGCATGTCCATCTTTGTTGGGCTGTAACTCCCCCTGAAGTTTGCTCTCTGTCAGGG
TTATGGTGCTCCACTCGCGCATTGAAGGGCTTCAGCAACATCAAGCTAGTCTGTACTGCTCATTTCCTGTTTGCTTGTAC
GTGTTGGGGCTAGGAAGTTGTTTCGGGCATCACCTTGTATCTGCCGTCTTTTTTTTTTGTTTTCCTTTTCTTTTGCTTGT
TTGCTATGCTTCGTTGTAACTGTGGGTGTTTGTATCTCCTGGCCGGTTGATGGCTTTGTTAATTCAAAGCCGGGCTCTCC
TTGAGCCTTCGTTCTAAAAAAAACTAATTTGATGCTTTGCTTAATCTGGCTGTCTGTTGTGCTAAAGCCGTGAGAGAGAA
TAATCCACGGTATATATATAACGTTGCTCAGTAAATTGGAGTATATTGTGTCATAGCGCACACGTTTTTGTCGGACTTCT
GAAAATTAAGGACGGCAGTGGCTGGTGCGTACATGCAGTTACGTGTTATCTCAGCCTCAAAATTGAGGTATTAAGCTAGT
GTTCATATAGTGTGTGCAGTGCAGCTACTGATTTTGGAAAGGTCATCGAACATATTAACGACATGATCTTTCAGTTTTAC
CCAACGTCTTGAATAGACAATAGTGGGCTATAGCCCCGCGATAGCGCCGCTATTGGTGATTTAGAGGACTGCCGCTATTT
AAAACAGTGGTTTTACCTCTTGTTGTTATATGACAGGAATGGATGCTTTGTAAGAGATGAGCATCCTGAGCAATATTAAA
GGATTTTTGTTTATCTTTTCGTTGCTTAATTTGATTTGATGTTTTGCTTAATTTAGCTGGTTGTTGTGTTAAAACTTTGA
GAGAATCTACGGTATATATAATGCTCCTTAGTAAATGGAGAATATAGTGTCATATCGTACACCTTTTTTTGGAGCTATAT
AATGGTAGTACATAACTGGAGGTAGATGGACTGATTCAGGGAGGTTAGTATGTTTAGGTAGATGCACTGGTCCAGTGAGC
TCGGATTGCACGAGCTCGGTACTAAGGATCTACCTAGGCTGCATTTGGCATCGCAGTGGATCACTTGTTTGTCCAATAAA
TGTTTTTGTGCCTGCCGTGATCCTTTTTTTTTGGTACACTTTTGTTGCTGATTTTCCGCCGCAGATTAGAAAATAAGTAC
ATTTCAACGCAGTTCAGTAACCACAAACTTAGTGGGTTTAAATAGCAAAATTGATATAAAGGTCTAAAAGAGATACATGG
AGGCTTCTGTAACAAAGTGAACAAGTGTTTTTCATTCTACGTTCTTTTTGGTAATTTCATCCCTATGATGGAGAACTTAA
CAGATACGTCGAGGCTTCTGTAACAAAGTGAACAAGTGTTTTTCACTATCAAGTTCGCACACTAACTAGTTTGAAAGTGA
AATGTGGTCCTGGTATCCATGCATAAGATTGAGGTGGTGTTTGTTTCTTTTATTTTACCCATGTTTGTTGAAGGCACTGC
CCCTCATGACATAGCCTATCATCCCATCCTGAACAAAGTTTTCTTGCCATCTCTCCTTTGATACAATGACAAAATCACCA
TAGGAACAGTGTCGTGTATATACATGTGAATGAAATTTCCATAAAAGGAAAAGAGGTACATGCTGAACTTAAGATTTTCT
TGTTTGGATTTTACAATCTTCAGTGGTTGGCTGGTTGCTTAACTAAAACCTGGTCTAGAAAGGATAAAAGTACAGTCAAG
TCAAGGAATTCGAAATAGTCAACCCGATATCTCTCCCTTTATGATGATCTATCCGCCTGTTTTCCCGGCACGGGATGTAG
GGCATGATAAGAGGAACGACGCCCCTTGTGTTTGATCTTTGTAATATCATCACTGGGTATGACTTCTGTAATAGGAAGGT
ATGTTGCTGACGAGGTAACGGAAATTGATGAGAGAAAAATTATCTAGATGGGTTTGATTGCATCTCCTTTGATTAATGTA
TGTTGTTTCACTGTGTTTAATGCCACTCTTTAGTTTGAAACGTGTTTATGCATGCATTGAATTTGTCATGACTGTCTAAC
AATGTGTGCAACTCTATCTGCAGTGGTGCAAGAGTCATCTTAATAACATCTGTCATTTCATTAAATGAACTTGAAGTGCA
CAGAAGCGTATTGTGAGATATCAACCAGAACTGCAGTGAATCTTCTAAGCTTGACTGCAGTGTTTACAAGATATTTTCCA
ATATGAAGACTTGCTGGTGATGAAGATTTTATCATGGCGATCAGTAGTGTAAAAATTCCTTCGCAAGACAGGTAAGTAAA
AATGAGGAGCAGCAATTGGAACAGAATGACTGAAAGTACAACTTGTGATAGGGAAGCTTCATTTGTGTTCTGGACAGGTA
TGGCTCAAATGATACAACAAGGTGAGCATGTTGAAAGTTAGTTGTGATATCCATCTTTCACATTAAAAGTTATTTATTTT
TTCCAAAACATTTTTGTCCAATCCATCCATCATCACTAGTTCCCTACTTGTAGTTGTCGGGGAGATCGTTAGGCGTGTTT
TCTACTTAATTTTGTGGTATCCATTAGATAAAGGGGTTTTAGATGTGATGCATCATGTCCACAAACTCCACGCCGATGGT
ATTACATCATGTCCACAAACTCCACGCCGATGGTATTACTTCTCACGCACAAATGGCAAAAAACTAGGAATTAGACTGTA
TCTAACCTAGCTTATCAGGAACCTGTTGAATCATCAGCTGAAGCATTGATTCAGTTGGTACCACAAAAGTTAAGCCTATC
TCGAATCTTGATTCTTCACGCCATTTTTCTATGTATGGTACTAACAACAACAGTTCAGCCTGTCCCAAATCTTGATTCTT
CTTCATCTTTACTTATTCGAGACACTATTTAAAAATAAATATCAAGGATCAGCCACTCTCGTGGTCGTAGCTAACTGTAT
GATTTTGGCCTGTCCCAATTCTCAAAAGCAAAGATTACAAAAGGTGGTAGAATAGAACCTTTAGACAGAGAACATATATT
CTTCCCGATTAGCCACATCTCTCATAGTGATTCCCCTGCACCTCAATCAAGCCTGCAACACTACGCCGACCACTCCCTCT
TCACCCGCCGCAGTCATCTATAAATAAGCACCGTTGGGTCATCACCATCATCCACTCCAAGAAACCAGCAACCTACATCA
AGCTCAAGTGAAGTGAGCTGACCAGAATATATCAATCACAAAGCCTGAAGAACAACAGCATACAGGCTAGCCACCAATTC
GCTCGATCTCCAATGGCGGAAAGAGTGACGAAGCTGGCGTCGCAGCGGGCGGTGGTGATCTTCGGGGTGAGCAACTGCTG
CATGTGCCACGCGGTGAAGACGCTCTTCACGGAGCTGGGCGTGAGCTGGGTGGTGCACGAGCTGGACAAGGACCCCCGCG
GGAAGGACGTCGAGAGGGCGCTCGCCGGCATGGTCGGACGGAGCCCGCCCGTGCCTGCGGTCTTCATCGGCGGCAGGCTC
GTCGGCCCCACCGACAAGGTCATGACGCTGCACCTCAGTGGCCAGCTGGTGCCGCTCCTCCGCCAGGCCGGCGCCCTTTG
GCTCTGAACT----GAAGAGTCAGGGACAGCAGTGGGCAGTGGCTG-TGCGTGCGTGCAGTTATGTGTGATCGC------
---------------TAGGGATCAT---ATAGTGCGT-----GCAGTGCGGCTACATAATTTTGGAAAGGTCATCAAACA
TATTAACGGTCATGATCTTTCAGTTGTACCTCTTGTTGTCATATG------ACAGAAGGAAAGGATGCTTTGTAAG-GAA
GAGCATCC-TGAGCAATATCAAATGCGCTTATGCTTATCTTGT-------GTTGCTTAATTTGATTTGATGATTTGCTTA
ATTTAGCTAGCTGTTGTGCTAAGGCCGTTATATATAGTATCATATTGCACACATTTTTCTGGAGCTATAGAATACTCCAT
CGATGACCGGAGTGATTCAGAGAGGTCAGTGTGTTGATGTAGATACCTAATCCAGTGAGCTCAGTTTGATGAGGTAGATG
CACACTGGTCCAATGAGCTCGGTATGGTACTTGTGCTGATGTGGCACGCTGCATTTGAAAGACACTGCTGATGGCATGGC
GTATTCATTTCAATTTCCACCATCAAACTTTGGTGCCTGCCTGCGATGGAACCCAAAACCCTCGAGAGCAAAGCAGAGTC
AAGAACGCAGGAAGCAGGGCAGAGCCAGAAAGGGGAAATTGGGCTGCTGCTACGGCCCGTTTGCCATGTCACTGCTGAAA
AAATCAATATGGGCAGCCTAGGTGGCAGTGGCCTTTAACATTGGCAACACAACAAGGTGAAGTGATTCTTGAGACCTTTC
TTTCACGCTCGAGACAGGAATATAACCCACTTGTAGATATTGTTAGTTATATAGATATACTACTAGATGTGTTAAAAAAA
GATATAATACTAGATGTGTGCACGTACGCTTGGTGATTCGAGTGCGTGGTGGCACATATTCGCGTTATCGTATCCTCCTA
CTTATTCATTCGCTCCTACTGTGGCGCGCCGACGGGGTGGGATGCGATGCGAGCCATAAGAATCCTCGTCGATACTCTAT
ATGCATGTTCCTGGCCGGCCGAGTTGACCTTGATCCATTCAGATGAGAAATGCTCGCCGGGCCGAAAGTTGAACCATGTG
GCCAACACAGACAGATTCGAGGACCTTTCTCCTGGTTTATGCTATAGATTTATTAAGACACAAGTGTGTAGTGCAGACAA
GAACTAGGTTTTGAGACGATACCTGACTAGGAGATAAATCTTTATGTTCCATATATTTTCCCTAGATTATACTCCTATCA
GATTAAGACAAGTTTTAATATTACTAAAGTTTTGCATCCCCATTAGGGTTTCTCTTTCCCTCTTCTGTTTATGGCGGCTA
GGATGCTTATCCCCACCAAGCTTTATCGATGAGCCCGTAGATCCACTTTCCCTTCACCTGCGGCCTGCCGCTCAGTTTTA
CCTTTTGTTGTCATGCGATAGAAGGAATGGATGCTCTGCGTTCTGAGCAATATTAATTGAGCTTATGCTTATCTTGTCGT
TGCTAAATTTGATGCTTTTCTTAATTTAGTTGGGTGTTATGCTAACCGTGAGAGA-------------------------
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>chr3B_998
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---GCAA-------------------------------------------------------------------------
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-------------TGGCAGAAACTGTGACGAAGCTGGTGTCACAGCGGGCGGTGGTGATCTTCGGGGCGAGCAACTGCTG
CATGTGCCACGCAGTGAAGACGCTCTTCACGGAGCTGGGCGTGAGCTGGGTGGTGCACGAGCTGGACAAGGACCCCCGCG
GGAAGGACGTCGAGAGGGCGCTCGCCAGCATGGTCAGACGGAGCCCGCCCGTGCCAGCGGTCTTCATCGGTGGCAGGCTC
GTCGGTCCCACAGACAAGGTCATGACGCTGCACCTCAGTGGCCAGCTGGTGCCGCTCCTCCGCCAGGCCGGCGCCCTTTG
GCTCTGAACT----GAAGAGTCAGGGACAGCAGTGG-------CTG-TGCGTGCGTGCAGTTATGCGTGATCAT------
---------------AAGAGATCAT---ATAGTGCGT-----GCAGTGCAGCTACATAATTTTGGAAAGGTCATCAAACA
TATTAAGGGTCATGATCTTTCAGTTGTACCTCTTGTTGTCATATG------ACAGAAGGAAAGGATGTTTGGCAAGAGAT
GAGCATCC-TGAGCAATATAAAAGGAGCTTATGCTTATCTTGT-------GTTGATTAATTT------------------
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>chr3D_998
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---GCAA-------------------------------------------------------------------------
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-------------TGGCGGAAAGAGTGACGAAGCTGGCATCGCAGCGGGCGGTGGTGATCTTCGGGGTGAGCAACTGCTG
CATGTGCCACGCGGTGAAGACGCTCTTCACGGAGCTGGGCGTGAGCTGGGTGGTGCACGAGCTGGACAAGGACCCCCGTG
GGAAGGACGTCGAGAGGGCGCTCGCCGGCATGGTCGGACGGAGCCCGCCCGTGCCAGCGGTCTTCATCGGCGGCAGGCTC
GTCGGCCCCACAGACAAGGTCATGACGCTGCACCTCAGTGGCCAGCTGGTGCCGCTCCTCCGCCAGGCCGGCGCCCTTTG
GCTCTGAACT----GAAGAGTCAGGGACAGCAGTGG-------CTG-TGCGTGCGTGCAGTTATGTGTGATCCC------
---------------TAGGGATCATATAATAGTGCGT-----GCAGTGCAGCTACATAATTTTGGAAAGGTCATCAAACA
TATTAAGGGTCATGATCTTTCAGTTGTACCTCTTCTTGTCATATG------ACAGAAGGAAAGGATGCTTTGTGTTGCTT
AATATCAAATGAGCAATATCAAATGAGCTTATGCTTATCTTGT-------GTTGCTTAATTCGATTTGATGATTTGCTTA
ATTTAGCTAGCTGTTG----------------------------------------------------------------
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-------------------------------------------------------------------------------
>SNPs
S--SSSSSSSSSSSSSSSSS-SSSSS-SSSS-SSSSSSSS-SSSSSSSSSSSS-S-S-S-SSSSS--SS--SSSS--S-S
S-SSSSSSSSS-S--S-SSSSS----SS-SS-SSSS--SSSSSSSSS-SSSSS-S--S-SSS-S--SS--SS-SSSSSSS
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--------------------------------------------------------------------SSSSSSSSSSSS
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>forward_59
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-----------------------------------------------------GACAGTCGGGAAGTCGTTGT-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
