>input_sequence_84005
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-----------------------------------------------ATGCAAGGTATGGCCCTGGCCATCCAACACTCA
AACTCTCTGATGATGTTGCAATCGGATTCCTCGGAAGCGTTATCTTGCTTGTCCACGGATGCTCTGTGGCGGTTAGCTTA
TGGCCAGTTAGTCTTGGAGATTAAACACTTAGCTGGTAGTAGGGAGTTTGTACCTCAGAAACTTAATCGTTCTCAGAATA
GAGTTGCCGATCGTTTGGCGAACTACAGCCGAACGGAGCGAGCCACCGCTGTCTGGCTTCGTTCAGTACCACCTTGTATT
GAGGACTTGTGGCCTCTCGACCGTAACTCTATGAGCTTGCAATAA-----------------------------------
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>chr3A_1_TraesCS3A01G221600
GACGTTTCGCCCTATCTCACCGAAGGGCAATTGCTGCTTGAACCGGGTGGCTGATTTTCTTGATGAAAACGGTGCTTGGC
GTGTGGATCGCCTTCGTGAGTTTTTTTGGCCTATGGACGTGGAGTACATAGTAAAAATCAGAGCATCGCCCCGTCAGCGT
GGTGATTTCTTGTCCTGGTTCCCGGAGAAATGCGGAGTATTCACGGTGAGGAGTGCTTACAAGCTAGCCACATGTGATCA
CAATGTGTCCTTTGCAAATGG--ATCTTCCAGCTCAAACCCAGAGGGGAATCGTTCACTATGGAACCGAGTTTGGTTGGC
CAATGTGCCTCAAAAGATGAAGATTACAGCTTGGAGAGTGGTTACTGGTACGTTGGCTACTCAACAGTGCAAGAATTACA
GGCATTTGGCTACACGTTCACCGTGTCCTCTCTGTGGGGTGGAGGAGGAGAGTACCTTTCATGCCTTGATCGCTTGCACT
CAGACAAGGATCTTGTGGATCAACATGCGCAGGAGATGGCCGCTTCCTAACGATAACCTACTCATTGATAATGGGAAGGA
ATGGCTAATGCTCCTTCTA-AACTCCTATTCAGAGATGGTCGGAGATATGATTATTATGCTGATTTGGCGTATATGACAA
ATACGTAATGACATCTACCACGGCAGGGAAGTCCCACCCGTGCCTGCTTCGGTTGAGTTTTTGGACAGTTACTATAAATC
AATCAACCTAGCGGGCAAGTTTCCAGTTGAGGATATTATCAAAGGGAAAATGCCTTCGGTGTCCCTTGTGGTGCCGCGCC
AAAAGGCTGTTGTGCCTATTTTGCCTTGGCCGACACCGGCGCAGGGTACGGTGGCCCTGTCCGTCGATGGTTCGTACCAA
CCGGAGGATGGCACCGCGGCGGCCAGGATGGTTCTAAGGAATAGTGAGGGTGTGATCTTATTTGCGGCATACAAATACA-
---TTTTCCATTGCAATGATCCACTGGAGGCGTAACTACATGCGATGATGCAAGGTATGGCCCTGGCCATCCAACACTCA
AACTCTCTGATGATGTTGCAATCGGATTCCTCGGAAGCGTTATCTTGCTTGTCCACGGATGCTCTGTGGCGGTTAGCTTA
TGGCCAGTTAGTCTTGGAGATTAAACACTTAGCTGGTAGTAGGGAGTTTGTACCTCAGAAACTTAATCGTTCTCAGAATA
GAGTTGCCGATCGTTTGGCGAACTACAGCCGAACGGAGCGAGCCACCGCTGTCTGGCTTCGTTCAGTACCACCTTGTATT
GAGGACTTGTGGCCTCTCGACCGTAACTCTATGAGCTTGCAATAAAACTCCCTTTACCCTCGCAAAAAAAAATCTAAACT
TTTGTTTCCTCTAATCAAACAGTTAATTTTTAGCTTTCTCACGCTTCAACTTTCATTCTCCATTTTTAATTCCCCGAACC
AAACACGCTCCCGCATAGGGAGAGGGAGAGAGAGATTGACCATAGGCTTTAGGTGGAATCCGATGCGCGCCAGTGAAGCG
ATCTCACCTGCATGCGTTGTAGTCTCACCCCGACCAGCTGCATAAACCATTGCCCGCAAGTTTGTGCATGTAACCGAAGG
CTGCAATATAGATCGCCATGTGCCATGGCTTGCTTGTAAATTCATGACCGTGAGACCCTAGATCCTTATTATTAGTAGCA
AGGTGTACGGTGTGAACTTGTTCAAACCCCCGCTCTGATCAACCGCGACTCTGCAACTAACTTGAGCTGCTCCTGCTCGT
CACAGGC-----CCTGGCTTACGCTTTTCCGACGAGGCAGTGGATCGTGCTGCAATGCTTCGCATTACTTTTGTTGTGAT
CTCTTACTGATATGAGCTATCTACTCCCTCTGTTTCAGAAATAGTTGTCGCTGGAGGTTTCTAGTTCAACTTTCGCGTAG
TACAGAAATATCCTCGCTTTCCAATTTTGTCCTCGCCGGCCTTCGCACTCGCTCGCTCACTCACTCGCCCAGCCGCACTC
ACTTGCTCGTGCTCTCTCGCGCTTCTCGCCGCTCGCCGGCCTTCCCCTTCTCGCCTGCCTCCCCTCTCCCCGTCGCTCGC
CGGCCTCAGGGCATCTCCATCCGCGCCCCCAGGAAGGCCTCCCCAAACGTTTTTTTTGCGTCGGCGTCGAAAAATCGGCC
CAGTCGCGCCCCCAGGAGCCCGATTTTCGCCGGTCTGGGCCGAAAACAGCGCCGGCGGACCCAGGCCGAACCCGGCGCGC
TGGGGGGCACCCGGGGGCGCCGGGCGTACTTTTTTGGCGCGAAAAAGCCGCGGGCCCGCCGCGTCAGCAACACGGCTCTC
TTCTCGGCTC
>chr3D_1
GACGTTTCGCCCTATCTCACCGAAGGGCAATTGCCGCTTGAACCGGGTGGCTGATGTTCTTGATGAAAACGATGCTTGGC
GTGTGGATCGCCTTCGTGAGTTTTTTTGGCCTATGGACGTGGAGTACATAGTAAAAATCAGAGCATCGCCCCGTCAGCGT
GGTGATTTCTTGTCCTGGTTCCCGGAGAAATGCGGAGTATTCACGGTGAAGAGTGCTTACAAGCTAGCCACATGTGATCA
CAATGCGGCCTTTGCAAATGG--CTCTTCTAGCTCAAACCCAGAGGGGAATCGTTCACTTTGGAACCGAGTTTGGTCGGC
CAACGTGCCTCAGAAGATGAAGATTACAGCTTGGAGAGTGGTTACCGGTACGTTGGCTACTCAACAGTGCAAGAATTACA
GGCATTTGGCCACACGTTCACTGTGTCCTCTCTATGGGGTGGAGGAGGAGAGTACCTTTCATGCCCTGATCGCTTGCACT
CAGGCAAGGATCTTGTGGATCAACATG--------ATGGCCGCTTCCCAACGACGACCTCCTCATTGATAATGTGAAGGA
ATGGCTAATGCTCCTTCTA-AACTCCTGTTCAGAGATGGTCGGAGATATGATTATTATGCTGATTTGGCGTATATGGCAG
ATATGTAATGACATCTACCACGGCAAGGAAGCCCCACCCGTGCCTGCTTCGGTTGAGTTCTTGGACGGTTACTATAAATC
AATCAACCTAGTGGGCAAGTTTTCAGTTGAGGATATTATCAAAGGGAA----CCTTGGGTGTCCCTTTTGGTGCCGCGCC
AAAAGGCGGCTGTGCCTGTTTTGCCTTGGTCGGCCCCGGCGCAGGGTACGGTGGCCCTGTCCGTCGATGGTTCGTACCAA
CCGGAGGATGGCACCGTGGCGGCCGGGATGGTTCTAAGGAATAGCGAGGGTGTGATCTTATTTGCGGCATACAGATACA-
---TTTTCCATTGCAATGGTCCACTAGAGGCGGAACTACATGCGATGATGCAAGGTATGGCCCTGGCCATCCAACACTCA
AACTCTCTGCTGATGTTGCAATCGGATTCCTCGGAAGCGTTATCTTGCCTGTCCACGGATGCTCTGCGGCGGTCAGCTTA
TGGCCAGTTAGTCTTGAAGATTAAACACTTAGCTGGTAGTAGGGAGTTTGTACCTCAGAAACTTAGTCGTTCTCAGAATA
GAGTTGCCGATCGTTTGGCGAACTACAGCCGAACGGAGCGAGCCATCGCTTTCTGGTTTTGTTCAGTACCACCTTGTATT
AAGGACTTGTGGCCTCTCGACTGTAACTTTATGAACTTGCAATAAAACTCTCTTTACCCTCGGAAAAAAA----------
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>chr7D_1
GACGTTTCGCCCTATTACACCCAAGGGTAACTGTCGGCTGAACCGGGTGGCGGATTTTATCGATGATAACGGTGCTTGGC
GTGTTGATCGCCAACAGGAGTTCTTTTGGCCTATGGACGTGGATCACATACTAAAAATCAGAACTTCTCCCCGCAACCGC
GATGATTTTGTCTCCTGGTTCCCGGAGAAGTCTGGAGTTTTCACGGTAAGGAGCGCGTACAAGTTGGCCACATGGGATCA
TAACGTCGCTTTCACTAATGG--CTCATCTAGTACAAACCCGGAGGGTGACCGCTCAGTGTGGAACCGTATTTGGTCGGC
CAATGTGCCTTAGAAGATGAAAATCAATGCCTGGAGAGTGGCAACCGGCACATTGGCAACTCAATAGTGCAAAAATCAGA
GGCACTTGGCTACACGTTCTCTATGCCCTCTCTGTGGGGTGGAGGAGGAGACTACTTTTCATGCTCTGATTGCATACACG
CAGGCGAGGACCTTGTGGATTAACATGCGTAGAAGATGGCCGCTGCCTAATGATGATGTTCTTATCGATAACGAGAAGGA
ATGGCTTATGTTCCTTCTC-AGCTCTTGTTCTGAGGCGGTTGGAGACATGGTGATTTTGCTGATTTGGAGGATATGGCAG
ATCCGTAATGACATATACCATGGCAAGGAAGCCCCTCCTGTGTTGGCCTCGGTAGAGTTCTTGAATAGTTACTATAAATC
TATCAACCTGGCGGGCAAGTTCACAGTGGAGGAGATTGTTAAAGGCAAAATGCCCTCGGTGG-CCTTGGGGCGCCGCGCC
AAAAAGCTTCAGCGACTGTCACGCCGTGGCCGGCACCACCACAAGGTTCCGTGGCCCTGTCCCTCGATGGATCTTTCCAT
CCGGAGGATGGCACTGCGGCGGTTGGGATGGTCCTAAGGAACCACGAAGGGGTGATTCTTTTTGCAGCGTACAGATGTG-
---TCTTTCACTGCAGATTCT--CTCGAGGCGGAACTACATGCGATGATGCAAGGTATGGTGCTGGCTATTGAGCATTCC
AATGCTCCGGTGATACTTCAATCGGACTCTTCTGAAGCGTTGTTATGCCTGTCTACGGATGCTCTCCAGCGTTCAGCTTA
TGGCCACTTAGTATTGGAGATCAAGTACTTATCTGGTAATAGGGAGTTTGTTCCTCGGAAACTTAGTCGTTCTCAGAATA
GAGTTGCCGATCGTCTGGCAAACTATAGCCGTACGGAGCAAGCTACCGCTGTCTGGCTATGCTTAGTTCCTCGTTGTATT
GAGAATGTATGGCCTCTCGACTGTAACTCTATGAATTTGCAATAAAACTCCCTTTAGCCTCGCAAAAAAAA---------
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----------
>chr6B_1
GACGTTTCGGCCTATCTCGCCGAAGGGCAATTGTCGCCTGAACCGGGTGGCTGATTTTATTGATGAAAACGGTGCTTCGC
GGGTGGATCGTCTCTGTGAGTTCTTTTGGCCTATGGACATGGAGTACATATTAAAAATCAGGACATCACCCCGGCAGCGC
GGTGATTTCTTGTCCTGGTTCCCGGAGAAATGCGGAGTATTTACGGTTAAGAGTGCTTACAAGCTAGTCACATGTGACCA
CAATACAACCTTTGCAAATGG--CTCATCTAGCTCAAACCCAGAGGGGAATCGTTCATTATGGAACCGAGTTTGGTCGGC
CAACGTGCCTCAGAAGATGAAGAATACAGTTTGAAGAGTGGTTACCGGTACGCTGGCTACTGAACAATGCAAGAAGTATA
GGCATTTGGCCACACGCTCGCTGTGTCCTCTCTGTGGGGT---GGAGGAGAGTACCTTTCGTGCCTTGATTGCTTGCGCT
CAGGCAAGGATCTTGTGGATCAACATGCGCAGGAGATGGCCGCTTCCCAACGACGAGCTTCTCATTGATAATGTGAAGGA
ATGGCCAATGCTTCTTCTA-AGCTCCTGCTCTGAGGTGGTCGGAGACATGGTTATTATGCTGATTTGG----TGTGGCAT
ATACGTAATGACATCTACCATGGCAAGGAAGCCTCACCCGTGCTTGCTTCGGTTGAGTTCTTGGATAGTTACTACAAATC
AATCAACCTTGCGGGCAAATTCCAAGTGAAGGATATTA-TAAAGGGAAAATGCCTTCGGTGCCCCTTGTGGTGCCGCATC
AAAAGGCTGCTG-GCCTGCTCTACCTTGGCCGGCACTAGCGCAAGGTAC-------------------------------
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----------
>chr3D_3
--CGTTTCGCCCTATATCTCCCAAGGGTAATTGCCGCCTAAACCGGGTGGCTGACTTTATTGATGGAAACGGTGCTTGGC
GAGTGGATCGCCTATGGGAATTTTTTTGGCCTATGGATGTGGAATGCATAGTAAAAATCAGAACATCGCCCCGTCAGCGC
GGTGACTTCTTGTCCTGGTTCCCGGAGAAATGCGGAGTATTCACGTTGAAGAGTGCTTATAAGCTAGCCACATGCGATCA
CAATACGGCTTTTGCAAATGG--CTCGTCCAGCTCAAACCCGGAGGGAAATCGCTCATTATGGAACCGAATTTGGTCGGC
CAACGTGCCTCAGAAAATGAAAATTACAGCTTGGAGAGTGGTCACCAGTACGCTGGCGACTCAAAAGTGCAAGAACTATA
GGCATTTGGCCACACGTTCGCTATGCCCGCTCTGTGGGGTGGAGGAGAAGAGCACCTTTCATGCTTTGATTGCTTGCACT
CAGGCAAGGATCTTGTGGATTAATATGCGCGGGAGATGGCCGCTTCCCAACGACGACCTTCTCATTGATAATGGGAAGGA
ATGGCTAATGTTCCTTCTA-AGCTCATGTTCAGAGGTGGTCGGAGATATGGTGATTATGCTGATTTGGCGTATATGGCAG
ATACGTAATGACATCTACCACGGCAAGGAAGCCCCACCTGTGCTTGCTTCGGTTGA-TTCTTGGATAGTTACTACAAATC
TATCAACCTAGCGGGCAAGTTTACAGTTGAGGATATCATCAAAGGGAAAATGCCTTCGGTGCCCTTTGTGACGCCGCGCC
AAGAGGCTGCTGCGCCTGTTCTGCCTTGGCCGGCACCAGCGCAGGATACGGTGGCCCTGTCCGTCGACGGTTCGTACCAG
CCGGAGGATGGCACCGCGGCCGCCGGGATGGTCCTAAGGAATAGCGAGGG-GTGATCTTATTTGCAGCATACCGATACA-
---TTTTCCATTGCAATGATCCACTGGAGGCGGAACTACATGCGATGATACAAGGTATG-CCCTGGCTATTCAACACCCC
GACTCTCCGGTGATGCTACAATCGGATTCCTCTGAAGCGTTATCATGTC--TCCACGGATGCTCTGCGGCGGTCAGCTTA
TGGCCACTTAGTTTTGGAGATTAAACATTTAGCTGGTAGTAGGGAGTTTGTACCTCAGAAACTTAGTCGCTCTCAGAATA
GAGTTGTCGATCGTTTGGCGAACTACAGCCGATCGGAGCGAGCCACCGCTGTCTGGCTACGCTCAGTACCACCTTGTATT
GAGGACGTGTGGCCTCTCGACTGTAACTCTATGAACTTGCAATAAAACTCCCTTTACCCTCGCAAAAAA-----------
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----------
>chr6D_3
--CGTTTCGCCCCATCACTCCGAAAGGCACTTGCCGCCTGAACAGGGTAGCTTATTTTCTTGATGAAAATGGGGCTTGGC
GGGTGGATCGTCTTCGAGAATTTTTTTGGCCCATGGACGTACTGTATATAACAAAGATCAGATCTTCGCCCTGTATGCGG
AATGATTTCTTGTCCTGGTTCCAGGAGAAGAGCGGGACCTTTACGGTGAAGAGTGCATCCAGACTAGCCACATGTGATCA
TAACACTGCCTTTGCAGGTGG--TTCTTCTAGTTCAGACCCTGAGGGGAATCGCTCGCTGTGGAACCGGATTTGGTCGTC
CAACGTACCACAGAAAATGAACATCACAGCATGGCGAGTGGTTACGGGTACCCTAGCTACTCAACAGTGCAAGAATTACC
GGCATTTGGCCACCCGCTTACTTTGCCCTATCTGTGAGGTGGAGGAGGAGTCTACTTTTCATGCTTTGGTCACTTGCACT
CATGCAAGAATTTCGTGGATCAACATGCTTAGAAGATGGCCTCTTCCAGATGACGATCGCCTCATTCATACTGGGAAGGA
CTGGCTAATGCTCCTACTT-GATTCCTGCTCAGAGATGGTCCGAGACATGGTAATTATGCTAATTTGGCGGATATGGCAG
ATACGCAATGACTGCTATCACGGCAAGGAAGCCCCACCCGTGCCTGCATCGGTTGAGTTCCTGGATAGTTACTATAAATC
CATCAACCTCGCGGGCAAGTTTTCAGCTGAGGAGATTATCAAAGGCAAAATGCCCTCGGTGCCACAGGTGGTGACGCGCC
AAAAGATGGTTGTGCCCGCTATACCATGGCCGGCTCCGGCAAGGGGTACGGTGGCCCTGTCCGTTGATGGTTCGTATAAC
CCACAGGATGGCTCCGCGGCAGCCGGGTGTGTTCTCCGAGACAGTGAGGGTTCAATCTTATTTGCGGCATACAAATATA-
---TTTTCCATTGCAACGATCCACTTGAGGCAGAACTACATGCAATGATGCAAGTTATGGCTCTTTCCATACAACACTCA
AACTCACCGGTGGTGTTGCAATCGCATTCCCTGGAAGCTTTATCCTGCCTATCAACAAATGCTCTGCGGCGGTCAGCTTA
TGGCTAGTTAGTCCTAGAGATTAAACATTTAGCTGGTAGTAGGGAGTTTGTACCTCAGAAAATTACTCATTTTCAGAATA
GAGTTGCCGATCGTTTGGCTTGTTACAGCCGAACGGAGCGAGCCACTGCTGTTTGGCTTTGTTCAGTATCACCTTGTATC
GAGGAATTATGGCCTCTCAACTGTAACTCTATGACTTTGCAATAAAATTCCCTTTACCCTCGCAAAAAGAA---------
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----------
>chr3B_5
----TTTCGCCCCATCACTCCGAAAGGCACCTGTCGCCTAGACAGGGTTGCTGATTTTCTTGATGAAAACAGGGCTTGGC
GGGTGGACCGTCTTCAAGAATTTTTTTGGCCCATGGGCGTACAGTATATAACAAAGATCAGAGCTTCGCCCTGTATGCGG
AATGATTTCTTGTACTGGTTCCCGGAGAAGAGCGGGAACTTTACGCTGAAGAGTGCTTACAGATTAGCCACATGTGATCA
TAACACGGCCTTTGCGGGTGG--TTCTTCTAGCTCAGACCCTGAAGGGAACCGCTCGCTGTGGAACATGATTTGGGCATC
CAACATACCACAGAAAATGAAGATCACAGCTTGGCGAGTGGTTACGGGTACCCTAGCGACTCAACAGTGCAAGGATTACC
GACATTTGGCCACACACTCACTTTGCCCTATCTGTGGGGTAGAGGAGGAGTCTACCTTTCATGCCTTGATCACCTGCACT
CAGGCAAGAATTTTGTGGATCAACATGCGTAGTAGATGGCCTCTTCCGGATGACGATCGCCTCATTCATACTGGGAAGGA
ATGGCTAATGCTCCTACTT-GATTCGTTTTCAGAAATGGTTCGTGACATGGTAATTATGTTGATTTGACGGATATGGCAG
ATACGCAACGACTGCTATCACGGTAAGGAAGCCCCACCCATGCCTGCATCGGTCGAGTTCTTGGATAGTTACTATAAATC
CATCAACCTCGCGGGCAAGTTTTCAGCGGAGGAGATTATCAAAGGCAAGATGCCCTCGGCGCCACAGGTGGTGACGCGCC
AAAAGATGGTTGTGGCCGCTGTACCATGGCCGGCTCCGGCGCGGGGTATGGTCGCCCTGTCCTTGGATGGTTTGTTTAAC
CCACAAGATGGCTCCGCGGCGGCCGGGTGTGTTCTCCGGGACAGTGAGGGCTCAATCTTATTTGCGGCATACAAATATAT
ATATTTTCCACTGCAACGATCCACTTGAGGCAGAACTACATGCAATGATGCAAGGTATGGCTG------TACATCACTCA
AATTCACCGGTGGTGTTGCAATCGGATTCCCTGGAAGCTTTATCCAGCCTATCAACAAATGCTCTACGACGGTCAGCTTA
TGGCCAGTTAGCCCTAGAGATTAAGTATTTAGCTGGTAGTAGGGAGTTTGTACCTCAGAAGATTAGTCGTGTACA----A
GAGTTGCCGATCATTTGGCTTGTTACAGCCGTACGGAGCGAGCCACTGCTGTTTGGCTTCGTTCAGTTCCACCTTTTATC
GAGGATTTGTGGCCTCTCGACTGTAACTCTATAACTTTACAATAAAACTCCCTTTACCCTCGCAAATAAATAAAT-----
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----------
>chr2B_5
----TTTCGCCCCATCACTCCGAAGGGCACCTATCGCCTAAACAGGGTTGCTGATTTCCAAGATGAACACGGGGCTTGCC
GGGTGGACCGTCTTCAAGAATTTGTTTGGCCCATGGACGTACGGTATATTACAAAGATCAGAGCTTCGCCCCGTATGCGG
AATGACTTCTTGTCCTGGTTTGTGGAGAAGTGTGGGAACTTTACTGTGAAGAGTGCTTACAGATTAGCCACATGCGATCA
TAACACAGCTTTTGCAGAGGTGCCTCGTCTAGCTCTGCCCCAGAAGGGTGTCGCTCGTTGTGGAACCGGATATGGGCCTC
AAACGTTCCACAGAAGATGAAGATCACAGCTTGGCGAGTGGTAACGGGTACCCTAGCGACCCAACAGTGCAAGAATTACC
GTCATTTGGCCACACGCTCACTCTGCCCTATCTGTGGGGTAGAGGAGGAGTCTACCTTTCATGCTTTGATCACTTGCACT
CAAGCAAGAACCTTGTGGATCAACATGCGTACAAGATGGCCACGCCCGGACGATGATCGCCTTATTGACACTGGGAAGGA
ATGGCTAATGATTCTACTT-GATTCCTGTACAGAGATGGTTCGTGACATGGTACTTATGCTGATTTGGCGGATATGGCAG
ATACGCAACGATTGCTATCATGGTAAGGAAGCCCCACCCGTGCCTGCGTCGGTTGAGTTCCTGGATAGTTACTATAAATC
CATCAACCTCGCGGGTAAGTTTTCAGCGGAGGAGAATATCAAAGGCAAGATGTCCTCGGCGCCACAGGTGGCGACGCGCC
AAAAGATGGTTACGGCTGTTGCACCTTGGCCGCCTCCGGCGAGGGGTACGGTCGCCTTCTCTATGGATGGTTCGTTCAAC
CCACAAGATGGATCCGCGGCGGCACGGTGTGTTCTCCGAGACAGTGAGGGTTCAATCTTATTTACGGCATACAGATACA-
---TCTTCCACTGCAACGATCCACTTGAGGCAGAGCTTCATGCAATGATGCAACGTATGGCTCTTGCCATACAGCACTCA
AACTCACCGGTGGTGTTGCAATCGGATTCCCGGAAAGCTTTATCCTGCCTATCAACAAATGCTCTACAACGGTTTGCTTA
TGACCAATTAGCCCTTGAGATTAAATTCTTAGCTGGTAGTAGGGAGTTTGTACCTCAGAAGATTAGTCATCTATAAAATA
GAGTTGCCGATCGTTTGGCTTGCTATAGCCGTACGGAGCGAGCCACTGCTGTTTGGCTTGTTTCAGCCCCATCTTGTATC
GAGGATTTGTGGCCTCTCGAATGTAACTCTACAACTATGCAATAAAACTCCCTTTACCCTCGAAAAAAA-----------
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----------
>chr3D_77
----------------------------------------------------------------------------TGGC
GTGTGGATCGCCTTCGGGAGTTGTTTTGGCCTATGGACGTGCAGTACATAGTAAAAATCAGAGCTTCGCCCCGATAGCAT
GGTGACTTCTTGTCCTGGTTCCTGGAGAAATGCGGGATATTCACGATGAAGAGTGCATATAAGTTAGCCACATGCGGACA
TAACACGGCCTTTTCAAGTGG--ATCGTCCAGCTCAAATCCGGATGTGAATCGTTCACTTTGGAACAGGATTTGGTTGGC
CAACGTGCCTCAGAAAATGAAGATTACAGCGTGGCGAGTGGTTACCGGTACTCTAGCTACTCAACAGTGCAAGAATTACA
GGTATTTGGCCACTCGTTCACTATGTCCTATCTGTGGGGTGGAGGATGAGAATACTTTTCATGCCTTGATCGCTTGCACT
CAGGCAAGGATCTTGTGGATCAATATGCGCAGGAGATGGCCGCTTCCAGACGACGACCTCCTCATTGATACTGGAAAGGA
ATGGCTAATGCTCCTTCTT-AATTCTTGTTCAGAGATGGTCGGAGATATGATTATTATGCTGATTTGGCGTATATGGCAG
TTACGCAATGACTTCTATCACGGCAAGGAAGTACCACCCGTGCCTTCGTCGGTTGAGTTCTTGGATAGTTACTATAAATC
TATCAACCTTGCAGGCAAGTTTCCAGTTGAGAATATTATCAAAGGAAAAATGCCTTCGGTGCCCCATGTGGTGTTGCGCC
AAAAGGCGGTTGTGCCCGTTTTGCCCTGGCCGGCACCGGCGC-GGGTACGGTGGCCCTGTCTGTTGATGGTTCGTTCAAC
CCAGAGGATGGCTCCACGGCGGCCGGGTTGGTTCTAAGGAATAGTGAAGGTATAATCTTATTTGTGGCATACAGATATA-
---TTTTCCATTGCAATGAGCCACTAGAGGCAGAACTACACGCGATGATGCAAGGTATGGCCCTGGCCATCCAACACTCA
AA---------------GCAATCGGATTCCTCGGAAGCATTGTTTTGCCTGTCAACGGATGCTCTGCGGCGGTCAGCTTA
TGACCAGTTAGTCTTGGAGATTAAACATTTAGCTGGTAGTACAGATTTTGTACCTCAGAAAATTAGTCGTTCTCGTAATA
GAGTTGCCGATCGTTTGGCTAACTACAGCCGAACGTAGCGAGCCACTGCTGTCTGGCTTCGTTCAGTTCCACCTTGTATC
GAGGACTTGTGGCCTCTCGACTGTAACTCTATGACTTTGCAATAAAACTCTCTTTACCCTTGCAAAAAAAAA--------
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>chr7D_348
--------------------------------------------------------------------------------
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-----------------------------CTTGGCGAGTGGTTACGGGTACCCTAGCGACTCAACAGTGCAAGAATTACC
GACATTTGGCCACACGCTCACTCTGCCCTATCTGTGGGGTAGAGGAGGAGTCTACCTTTCATGCCTTGATTACCTGCACT
CAGGCAAGAATATTGTGGATCAATATGCGGAGTAGATGGCCTCTCCCGGATGATGATCGCCTCATTCATACTGGGAAGGA
ATGGCTAATGCTCCTACTT-GATTCCTGCTCAGAGATGGTTCGTGACATGGTAATTATGCTTATTTGGCGGATATGGCAG
ATACGCAACGACTGCTATCACGGTAAGGAAGCCCCACCCGTGCCTGCATCGGTTGAGTTCTTGGATAGTTACTATAAATC
CATCAACCTCGCGGGCAAGTTTTCAGCGGAGGAGATTATCAAAGGCAAGATGCCCTCGGCGCCACAGGTGGTGACGCGCC
AAAAGATGGTTGTGGCCGCTGTACCATGGCCGGCTCCAGCGAGGGGTATGGTCGCCCTGTCCGTGGATGGTTCGTTCAAC
CCACAAGATGGCTCCGCGGCGGCCGGGTGTGTTCTCCGGGACAGTGAGGGTTCAATCTTATTTGCGGCATACAGATATA-
---TTTTCCACTGCAATGATCCACTTAAGGCAGAACTACATGCAATGATGCAAGGTATGGCTCTTGCCATACAGCACTCA
AATTCTCCGGTGGTGTTGCAATCGGATTCCCTGGAAGTTTTATCCTGTGTATCAACAAATGCTCTACGACAGTCAGCTTA
TGGCCAGTTAGCCCTAGAGATTAAGTTTTTAGCTGGTAGTAGGGATTTTGTACCTCAGAAGATTAGTTGTCTACAGAATA
GAGTTGCCGATCGTTTGGCTTGTTATAGCCGGACAGAGCGAGCCATTGCTGTTTGGCTTCGTTCAGTTTCACCTTGTATT
GAGGACTTGTGGCCTCTCGACTGTAACTCTATAACTTTGCAATAAAACTTCCTTTACCCTTGCAAAAAAAA---------
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>chr7D_374
--------------------------------------------------------------------------------
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-------------------------------------------------------GCTACTCAATAGTGCAAGAATTACA
GGCATTTTGCCACCCGTTCACTATGCCCTATCTGTGGGGTGGAGGAGGAGTCTACTTTTCATGCCTTGATCGCCTGCACT
CAGGCAAGAATCTTGTGAATCAACATGCGTAGGAGATGGCCTCTTCCAGATGACAATCTCCTCATTGATGCTGGGAAGGA
ATGGCTAATGCTCCTTCTT-AATTCCTGTTCAGAGATGGTCAGAGATATGGTTATTATGCTGATTTGGCAGATATGGCAG
ATACGCATTGACTGCTATCACGGCAAGGAAGCCCCACCCGTGCCTGCATCGATTGAGTTTTTGGATAGTTACTATAAACC
CATCAACCTTGCGGGCAAGTTTTCAGTTGAGGACATTATCAAAGGGAAAATGCTCTCGGTGCCACAGGAGGTGTCGCGCC
AAAAGGTGGTTGTGCCCGCTGTGCCCTGGCCGGCTCCGGCTAGGGGTATTGTGGCCCTGTCCGTTGATGGTTCGTTCAAC
CCAGAGGATGGCTCCGCGGCGGCCGGGTGTGTTCTCAAGAACAGTGAGGGT---ATGATCTTTGCGGCATACAGATATA-
---TTTTCCATTGCCACGAGCCACTTGAGGCAGAATTACATGCAATGATGCAAGGTATGGCTCTGGCCATACAACATTCA
AACTCACCGGTGTTGTTGCAATAGGATTCCCTGGAAGCATTATCTTGCCTATCAACAAATGCTCTGCGGCGGTCAGCTTA
TGGCCAGTTAGTCTTGGAGATTAAACATTTAGCTGGTAGTAGGGAGTTTGTACCTAAGAAAATTAGTCGTTTTCAGAATA
GAGTTGCCAATCATTTGGCATGCTATAGCCGAACGGAGCGAGCCACTGCTGTTTGGCTTCGTTCAGTTCCACCTTATATC
GAGAACTTGTGGCCTCTCGACTGTAACTCTATGACTTTGCAATAAAACTCCCTTTACCCTCGCAAAAAAAAA--------
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>chr3A_540
--------------------------------------------------------------------------------
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-------------------------------------------------------------TCATTGGTAATGGGAAGGA
ATGGCTAATGCTCATTCTTTAACTCCTATTCAGAGATGGTTGGAGATATGGTTATTATGCTCATTTGGCGTATTTGGCAG
ATATGTAATGTCCTCTATCATGGCAAGGAAGTTCCACACGTGCCTGCATTGGTTGAGTTTTTGGATAGTTACTATAAATC
TATTAACCTAGCGGGCAAGTTTCCAACGAAGGATATTATCAAAGGGAAAATGCCTTCAGTGCCCCATGTGGCGTTGCGCC
AAAAGGCTGTTGTGCCCCTGTTGCCCTGGCCGGCACCGGCGCAGGGTACGGTGGCCCTGTCCGTTGATGGTTCGTTCCAC
CCAGAGGATGACTCCGCGGCGGCCGGGATGGTTCTAAGGAATAGTGAGGGTGTGATCTTATTTGCGGCATATAGATATA-
---TTTTCCATTGCAATGAGCCACTTGAGGCAGAACTACACGCGATGATGCAAGGTATGGCCCTGGCCATCTAACACTCA
GACTCCCCGGTGATGTTGCAATCGGATTCCTCGGAAGCATTATCTTGCCTGTCAACGGATGCCCTGCGGCGGTCAGCTTA
TGGTCAGTTAGTCTTGGAGATTAAACATTTAGCTGGTATTAGGGAGTTTGTTCCTCAGAAACTTAGTCGTTCTCAGAATA
GAGTTGTCGATCGTTTGGCTAACTACAGCCGAACGGAGTGAGCCACCGGTGTCTGGCTTCGTTCTGTGCCACCTTGTATC
GAGGACTTGTGGCCTCTCGACAATAACTCTATGACTTTGCAATAAAACTCCCTTTACCCTCGCAAAAAAAA---------
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>chr3D_1348
TAAACTCGC-----------------------------------------------------------------------
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---GTTCCCTCTAATCAAACAATTAACTTTCAGCTTTCTCACCCCTCAACACCCATTCCCCATTTCCAATTCCCCGAACC
AAACACGCTGAAGCATAGGGAGAGGGAGAGACAGATTGACCATAGGCTTTAGGTGGAATCCGACGCGCGCCAGTGAAGCG
ATCTCACCTGCATGCGCTGTAGTCTCACCCCGGCCAGCTGCATAAACCATTGCCCGCAAGTTTGTGCATGTAACCGAAGG
CTGCAATATAGATCCCCATGTGCCATGGCTTGCTTGTGAATTCATGACCGTGAGACCCTAGATCTTTATTATTAGTAGCA
AGGTGTACGGTGTAAACTTGTTCAAACTCCCGCTCTGATCAACCGCGACTCTGCAACTAACTTGAGCTGCTCCTGCTCGT
CACAGTGAAGGTCCTGGCTTGCGCTTTTCAGACGAGCCAGTGGATCGTACTGCAATGCGTTGCATTACTTTTGTTGTGAT
TTCTTACCGATATGAGCTAT------------------------------------------------------------
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>SNPs
----------------------------------S---------------------------------------------
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-------S------------------------------------------------------------------------
------------S--------------------------------S----------------------------------
---------------------S----------------------------------------------------------
---S-------------------------------------------------------S--------------------
----------------------------------------------------------------------------S--S
-------------------------S------------------------------------------------------
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-----------------S--------------S-----------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------S-----------------------------------------------
---------S--------------------------------------S-----------------S-------------
-----------------------------------------------------------------S--------------
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---------------------S------------S-------------------------------------SS-SSSSS
SSS---S--------------S----S---S-----------S-S-----SSS-----S------SS-------------
---------SSS-------------------S-------------------------------S----------------
----------------S---------------S-----------------------------------------------
--------------S----------------------S--------------------------S---------------
-------------S-------------S----------------------------------------------------
-----SS-------------S--------S------S-----------S---------S-S-------------------
S------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS
>forward_993
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-------------CAATGATCCACTGGAGGCGT-----------------------------------------------
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>reverse_2306
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-----------------------------------------------------------------AGCAACACGGCTCTC
TTCTC-----
