>input_sequence_83926
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---------------------------------------------------------------------------ATGGT
ATTGAGTGTTATAATATCGAACTTGACATTCATTGCTCCTAATTTCTGGAATAGTGCGATCGCTTCGTCTGCACAATTAT
TTTTACAAAGACCACCAAGTATTATATTGTATATGGAAATGCTCACTGGTATACCCCTTTCGGTCATCTCATGGAACATT
TCCCTTGCAGCAACAGTTCTCCCAGCACGGAACAACCCATCCAGCATGATGCCATATGTAACAGTGTTAGGTTTAATTCT
CTTGCGCGGCATTTCTCTGAATAGAATCAAAGCATCATTGATCCTTCCATTTCTACAATAGCCATCAAGAATTGA-----
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>chr1B_1_TraesCS1B01G075400
TACCTCATCATTTTGATGTAACCAAAGTTTCAGCAACATACAGAATGAAGCCTTTTCCAGTTACCGGGACAACCACCTAC
TGCTACTTCTAGAGTTCCATATTTCCAGTTCTAGTAAATTCACCTGCGCTTTCTAATCCACCTCAATTCATTAAAAACAC
AGTTTACGTCTAAGCGGTGCTGTCCATCCATGATTAAGCAAGAGCATGAGAAGGGCACAGCCACCTTCTGCTATTT-TCA
GATTACACTAGGTAAAAAGAAGCTGAGATTTGAGGAACAGGAAGAGGGAGACCAACGGGTATGGTGGAGGCACACTCCTC
ACTGTATATATGTGAGTTCCTGAAGTGGGGAGGCGTAAACACAGCGAACCGATGCGATGCTGGGAGCAGTGCTTCGTCCC
ACTCAGTGTGATTTAATCAGCAAAGAAACGTCGAGCACCGGATGACCATTCT----------------------------
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------ACACCGCAGAATGAACTAAATGAAATAGTGACGGATCTACTTTCTGCAAGCAGGCAACTTGGATATCTTATACT
GGCAGGAGGGCCTTGTGTAAAGCAAAAGGTTCAACAATGCTGAGTTAGCCGCATAGACAATGCATCAACTAGTCAACCAA
ATCCATTGAAAAATTGATACTTTGCAGGAAGCAATTCAATGTTTTCCCGATATTTCCCTTCCCTTGAAAAGAGAGACAAC
AGCAAAGAAGTAGTTGAAGCTTCAAGTGAGATGATCTTCCCATCAACTTTAGATAAATAATTCCCGGCCCTGGCAATCTC
ACCTTTTTCCAACAACATTCTGATGATATAATTTATAAGACGAGAGCTGGGAGCACAACCACTCTTCTCCATTGATGAAA
ACATATTGTCAACTTCTTCCACTGATCCTTCCTTTAGAATATTTTTTATCACTATGCCGTAAGTAGAAGCATTAGGCACC
AACCCACTGGCTGATACTGCAGCAAACAAATCGTTAGCTTCTTCTCTTCTCCGAACCTTGAACATTGCATTAATCATGGT
ATTGAGTGTTATAATATCGAACTTGACATTCATTGCTCCTAATTTCTGGAATAGTGCGATCGCTTCGTCTGCACAATTAT
TTTTACAAAGACCACCAAGTATTATATTGTATATGGAAATGCTCACTGGTATACCCCTTTCGGTCATCTCATGGAACATT
TCCCTTGCAGCAACAGTTCTCCCAGCACGGAACAACCCATCCAGCATGATGCCATATGTAACAGTGTTAGGTTTAATTCT
CTTGCGCGGCATTTCTCTGAATAGAATCAAAGCATCATTGATCCTTCCATTTCTACAATAGCCATCAAGAATTGAACTAT
ATGTAACAACATTAGGCTCAATGCCAGCTGACACCATGGCATCAAGCACTCCGAGTGCTTCACCCATCTGGCCGACTAAG
CCATATCCGTCAATCAGTGAACTGAATGTAATGACATTAGGCCTCTCGCCCATGCCTATAACCAAGTCAAAGATACCTTG
TGCATTCATAACCCTTCCTTCTTTGCATAAAGAGTTTATTACTGAATTGAAGAAC-GCAATGTCAGGACGAGGAATACCT
TTGTTCATCATTTCAGACACAAATTCCTTAACTTTAACCAAATCACCATGCATACAAAAACCCTGAATTAGGGAGTGATA
AACAGTTGTGTCCGGCTGAACACCCATATCAGTCATCTCATTGAACTTGTCCATAGCATTGGCCAGCCTACGCAATCTGC
AAAATGCGGCTATTACAGTGGAATAGGTGACTACATTGGGACTCACTCCTTTTTCCCGCATTTCAGTA-AATATGAGCAT
AGCTTCATCCATCATTCCACGTTTAGCATATGCATCAATTAATATGGTGAAAACATGGCAATCGGCTACAAAACCATTGC
TTTCCATTGAATTGAAGAGATCAATCATATCAGCAAAGCATCCCTCAGTGGCATACCCATGAAGCAAAATACGGTACGAG
ACGGCATCCAGTTTGTGGCCCTTGGCAGTCATGGAATAAAATATTTCTGCCGCTTCTTTGCTTCTTCCATGCTTGCAAAG
GGAAGTCATTAACAAGTTGCAAGTGACTGCATTTGGTACAAGACCATGGCTTGTCATTTTTCTAAACATTTTAGCAGCCT
CTTTCAACTGCCCTGATGTGGAATATCCATGGATCATGCAATTATATGTCACTGTGTTGGGTTGAACACCTTTATCGACC
ATCTGCTGAAGGACTAGTTCTGCCTTGTCCATCGCTCTGGCCTTGCACAATGCATCAATGATCAAGTTGTACGTCACCAC
ATCAGGATCAACCCCTTGATGTATCATTTCATGGAAT
>chr1A_11
TTTTT----------ATGTAACCAAAGTTTCAGCAACATACAGAATGAAGCCTTTCA-AGTTATCGGGACAACCACCTAC
AGCTACTTCTAGAGTTCCATATTTGCAGTTCTAGTAAATTCACCTGCGCCTTC-AATCCACCTCAATTCCTTGAAAACAC
AGTTTACGTCTCAGCGGCGCTGTCCATCCATGATTAAGCAAGAGTGTGAGAAGGGCAGAGCGACCTTCTACTATTTTTCA
GATTACACTAGGTAAAAAGAAGCTGGGGTCTGAGGAAGAA-AAGAGGGAGACTAATGGGTATGGTGTTGGCACACACCTC
ATTGTATATATGTGAGCTCCGGAAGCGGAGAGGCGTAAACACAGCGAATCGATGCGAGGCTGGCAGCAGTGCCTCGTCCC
ACTCAGTGTGATTTAATCAGCAACAAAACATTGAGCACTGGATGACCAATTGACAGGTAAAGGTCGCAGCTTGGATTCTT
GGAACAATTTACTATGGAAGAGCAGTAGCGACAGAGAATTGAGGACAGCAGAAATGGAGAGGAATGCACAACATACGCGT
ACGAGAGCAGGACGGTCTCATCAATCAGATCCATCAATTCTCTCTCCTCTGTCACCCAAGGCGGAGTTGGTGTCACGCGC
ACTGAAGCTAAAGGTCACAGCAGTGAATTCTTTGCCGTACCTTACCTACATCATGAAGAAAGTAGTTTTTTATTTGGGAA
GGAAAGTGGTTGAATTTTCAATGGAGTGAAACAGAAAGAAATCATACTGAAAATATTTCTCCTATGTGTATGCAACAGAC
TCCACCAGTGTAACTGGCAGCGTAGAGTGGCATGAACTTGTATATCCAATACTTGAGCATAGCATCAGCCCGCTCAAACA
TCGTTCTTCCAGGACCCATTCGCCCTGACAATAGAGAAAATATCTCAAAGTAAAAGTAAATCCACTTGCATACAGAGCAG
ATCGTTGAGAATGACATGGCTAAAATTGCATGCATATAAAGGAAAATGACTGTTTTAGAGAGATTGCAAAATCTCAGGAA
GCTACTACAAAAGATTGCATTAGTATTCATTGTGGTTACCTTCCCTAATCGCAATCAGAAGCCATTAGCCCCAAAATTGC
AACCATTCATGACTACTTGGTCTAACTTTCCTCACCCATCAAAGATCAAAAGTTCCATAGTCATTTCAAATTCTTGTGGT
TTTGACACACCGCAGAATGAACTCAATGAAATAGTGACAGATCTACTTTCTGCAAGCAGGCAATCTGGATATCTTTTACT
GGCAGGAGGGCCTTGTGGAAAGCAAAAGGTTCAACAATGCTGAGTTAGCCACATAGACAATGCATCAACTAATCAACCAA
ATCCAATGAAAAATTGATACTTTGCAGGAAGCAATTCAATGTTTTCCCGATATTTCCCTTCCCTTGAAAAGAGAGACAAC
AACAAAGAAGTAGTTGAAGCTTCAAGTGAGATGATCTTCCCATCAACTTTAGATAAATAATTCCCAGCCCTGGCAATCTC
ACCTTTTTCCAACAACATTCTGATGATACAATTTATAAGACGAGAGCTGGGAGCACAACCACTCTTCTCCATTGATGAAA
ACATATTGTCAACTTCTTCCACTGATCCTTCTTTTAGAATATTTTCTATCATTATGCCGTAAGTAGAAGCATTAGGCACC
AACCCACTGGCTGATATTGCAGCAAACAAATCATTAGCTTCTTCTCTTCTCCGAACCTTGAACATTGCATTAATCATGGT
ATTGAGTGTTATAATATCGAACTTGACATTCATTGCTCCTAATTTCTGAAATAGTGTGATTGCTTCGTCTGCACAATTAT
TTCTACAAAGACCTCCAAGTATTATATTGTATATGGAAATGCTCACTGGTATACCCCCTTCGATCATCTCATCGAACATT
TTCCTTGCAGCAACAGTTCTCCCAGCACGGAACAACCCATGCAGTATGATGCCATATGTAACAGTGTTAGGTTTAATTCT
CTTGCGCGGCATTTCTCTGAATAGAATCAAAGCATCATCGATCCTTCCATTTCTACAATAGCCATCAAGAAGTGAACTAT
ACGTAACAACATTAGGCTCAATGCCAGCTGATACCATGGCATCAAGCACTCCAAATGCTTTATCCATCTGGCCAATTAAG
CCATATCCATCAATCAGTGAGTTAAATGTAATGACGTCAGGTCTCTCATCTATGCTTATAACCAATTCAAAGATATCTTG
TGCATCCATAACTCTTCCTTCTTTGCATAGACTGTTTATTATTGAACTGAAGAAC-GCAATGTCAGGACGAGGAATACCT
TTGTTCATCATTTCAGACACCAACTCCTTAGCTTTAACCAAATCACCAAGCATACAAAAACCCTGAATTAGGGAGTGATA
AACAACTGTGTTCGGCTGAACACCCATATCAGTCATCTCATTGAACCTGTCCATAGCATCGGCCAGCCTACCCAATCTGC
AAAGTGCGGCTATTACAGTGTAATAGGTGAATACATCGGGACTCACTCCTTTTTCCCGCATTTCAGTA-AATATGAGCAT
AGCTTCATCCATCATTCCACGTTTAGCATATGCATCAATTAATATGGTGAAAACATGGCAGTCGGCTACAAAACCATTGC
TTTCCATTGAGTTGAAGAGATCAATCATATCAGCAAAGCATCCCTCAGTGGCATACCCATTAAGCAAAATACGGTGCGAG
GCAGCATTCGGTTTGTGGCCCTTGGCAGTCATGGAATAAAATATTTCTGCCGCTTCTTTGCTTCTTCGATGCTTGCTAAG
GGAAGTCATCAACGAATTGTAAGTAACAATATCTGGTATAAGACCACGGCTTGTCATTTCTGTCAACATTTTAACAGCCT
CTTTCAACCGCCCTGACGTGGAATATCCATGAATCATGCAATTATAAGTCACTGTATTGGGCTGAACACCTTTATCGACC
ATCTGCCGAAGGACTAGCTCTGCCTTGTCCATTGCTCTGGCCTTGCACAATGCATTAATGATCGAGTTGCACGTCACCAC
ATCAGGATCAACCCCTTGATGTATCATTTCATGGAAT
>chr1D_20
-------------------AACCAAAGTTTCAGCAACATACAGAATGAAGCCTTTTGC---------GACAACCACCTGC
AGCTACTTCAAGAGTTCCATATTTCCACTTCTAGTAAATTCACCGGCGCTTTCTAATCCACCTCAATTCCTT-AAAACAG
AGTTTACATCTAAGCGGCGCTGTCCATCCATGCTTAAGCAAGAGCGTGAGAAGGGCAGAGCGACCTTCTACTATTTTTCA
GAGTACACTAGATAAAAAGAAACTGGGGTCTGAGGAAGAA-AAGAGGGAGACTAATGGGTATGGTGTTGGCACACACCTC
ATTGTATATATGTGAGCTCCTGAAGCGGAGAGGCGTAAACACAGCGAATCGATGCGAGGCTGGCAGCAGTGCCTCGCCCC
ACTCAGTGTGATTTAATCAGCAACAAAACGTTGAGCACTGGATGACCAATTGACAGGTAAAGGTCGCAGCTTGGATTCTT
GGAACAATTTACTATGGAAGAGCAGTAGCGACAGAGAATTGAGGACAGCAGAAATGGAGAGGAATGCACA----------
-----------------------ATCAGATCCATCAATTCTCTCTCCTCTGTCACCCAAGGCGGAGTTGGTGTCACGCGC
ACTGAAGCTAAAGGTCACAGCAGTGAATTCTTTGCCGTACCTTACCTACATCATGAAGAAAGTAGTTTTTTCTTTGGGAA
GGAAAGTGGTTGAATTTTCAATGGAGTGAAACAGAAAGAAATCATACTGAAAATATTTCTCCTATGTGTACGCAACAGAC
TCCACCAGTGTAACTGGCAGCGTAGAGTGGCATGAACTTGTATATCCAATACTTGAGCATAGCACCAGCCCGCTCAAACA
TCGTTCTTCCAGGACCCATTCACCCTGACAATAGAGAAAACATCTCAAAGTAAAAGTAAATCCACTTGCATACAGAGCAG
ATCGTTGAGAATGACATGGCTAAAATTGCATGCATATAAAGGAAAATGACTGTTTTAGAGAGATTGCAAAATCTCAGGTA
GCTGCTACAAAAGATTGCATTAGTATTCATTGTGGTTACCTTCCCTAATCGCAATCAGAAGCCATTAGCCCCAAAATTGC
AACCATTCATGACTACTTGGTCTAACTTTCCTCACCCATCAAAGATCAAAAGTTCCATAGTCATTTCAAATTCTTGTGGT
TTTGACACACCGCAGAATGAACTCAATGAAATAGTGACAGATCTACTTTCTGCAAGCAGGCAATTTGGATATCTTTTACT
GGCAGGAGGGCCTTGTGGAAAGCAAAAGGTTCAACAATGCTGAGTTAGCCGCATAGACAATGCATCAACTAATCAACCAA
ATCCATTGAAAAATTGATACTTTGCAGGAAGCAATTCAATGTTTTCCCGATATTTCCCTTCCCTTGAAAAGAGAGACAAC
AACAAAGAAGTAGTTGAAGCTTCAAGTGAGATGATCTTCCCATCAACTTTAGATAAATAATTCCCGGCCCTGGCAATCTC
ACCTTTTTCCAACAACATTCTGATGATATAATTTATAAGACGAGAGCTGGGAGCACAATCACTCTTCTCCATTGATGAAA
ACATATTGTCAACTTCTTCCACTGATCCTTCTTTTAGAATATTTTCTATCATTATGCCGTAAGTAGAAGCATTAGGCACC
AACCCACTGGCTGATATTGCAGCAAACAAATCGTTAGCTTCTTCTCTTCTCCGAACCTTGAACATTGCATTAATCATGGT
ATTGAGTGTTATAATATAGAACTTGACATTCATTGCTCCTAATTTCTGGAATAGTGTGATTGCTTCGTCTGCACAATTAT
TTCTATAAAGACCTCCAAGTATTATATTGTATATGGAAATGCTCACTGGTATACCCCCTTCGATCATCTCATCGAACATT
TTCCTTGCAGCAACAGTTCTCCCAGCACGGAACAACCCATCCAGTATGATGCCATATGTAACAGTGTTAGGTTTAATTCT
CTTGCGCGGCATTTCTCTGAATAGAATCAAAGCATCATCGATCCTTCCATTTCTACAATAGCCATCAAGAAGTGAACTAT
ACGTAACAACATTAGGCTCAATGCCAGCTGATACCATGGCATCAAGCACTCCAAATGCTTTATCCATCTGGCCAATTAAG
CCATATCCATCAATCAGTGAGTTAAATGTAATGACGTCAGGTCTCTCATCTATGCTTATAACCAATTCAAAGATATCTTG
TGCATCCATAACTCTTCCTTCTTTGCATAGACTGTTTATTATTGAACTGAAGAAT-GCAATGTCAGGACGAGGAATACCT
TTGTTCATCATTTCAGACACCAACTCCTTAGCTTTAACCAAATCACCAAGCATACAAAAACCCTGAATTAGGGAGTGATA
AACAACTGTGTTCGGCTGAACACCCATATCAGTCATCTCATTGAACCTGTCCATAGCATCGGCCAGCCTACCCAATCTGC
AAAGTGCGGCTATTACAGTGTAATAGGTGAATACATCGGGACTCACTCCTTTTTCCCGCATTTCAGTA-AATATGAGCAT
AGCTTCATCCATCATTCCACGTTTAGCATATGCATCAATTAATATGGTGAAAACATGGCAGTCAGCTACAAAACCATTGC
TTTTCATTGAGTTGAAGAGATCAATCATATCAGCAAAGCATCCCTCAGTGGCATACCCATTAAGCAAAATACGGTACGAG
GCAGCATTCGGTTTGTGGCCCTTGGCAGTCATGGAATAAAATATTTCTGCCGCTTCTTTGCTTCTTCCATGCTTGCAAAG
GGAAGTCATCAACGAATTGTAAGTAACAATATCTGGTATAAGACCACGGCTTGTCATTTCTGTCAACATTTTAACAGCCT
CTTTCAACCGCCCTGATGTGGAATATCCATGAATCATGCAATTATATGTCACTGTATTGGGTTGAACACCTTTATCGACC
ATCTGCCGAAGGACTAGCTCTGCCTTGTCCATTGCTCTGGCCTTGCACAATCCATCAATGATCGAGTTGTACGTCACCAC
ATCAGGATCAACCCCTTGATGTATCATTTCATGGAAT
>chr1D_528
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--CAGGGGGGACTTATTGAAAGCAAAAAGTTCAACTTTGCTGAGTTAGCAGCATATGCAATGCGTCAACTAGTCAACCAA
ATCCATCGAAAAATTGATAGTTTGCAGGAAGCAATTCAATGCTTTCCCGATATTTCCCTTTCCTTGAAAAGAGAGACAGC
AACAAAGAAGTAGTTGAAGCTTCAAGTGAGATGACCTTCCCATCAACTTTAGATAAATAATTTCCGGCCTTGGCAATCTC
ACCTTTTTCCAACAACATTCTGATGATAATATTTATAAGACAGGAGTTGGGAATTATACCACTCTTCTCCATTGATGAAA
ACATACTGTCAACTTCTTCCACTGATCCTTCTTTTAGAATATTTTTTATCATTATGCCGTAAGTAGAAGCATTAGGCACC
AACCCACTGGCTGATATTGCAGCAAACAAATCGTTAGCTTCTTCTCTTCTCCGAACCTTGAACATTGCATTAATCATGGC
ATTGAGTGTTATAATGTTGAACTTTACATTCATTGCTCCTAATTTCTGGAACAGTGCGATCGCTTCATCTGCACAATTAT
TTCTACAAAGACCTCCAAGTATTATATTGCATATGGAAATGCTCACTGTTATACCCCTTTCGATCATCTCATGGAACATT
TTCCTTGCATCAACAGTTCTTCCAGCACGAAACAACCCATCCAGTATGATGCCATATGTAACAGTGTTAGGTTTAATTCT
CTTACGCGGCATTTCTCTAAATAGAATCAAAGCATCATTGATCCTTCCATTTCTACAATAGCCATCAAGAAGTGAACTAT
ACGTAACAACATCAGGCTCAATGCCAGCTGATACCATGGCATCAAGCACTCCGAGTGCTTTACCCATCTGGCCGACTAAG
CCATATCCGTCAATCAGTGAACTGAATGTAATGACATCAGGTCTCCCATCTATGCTTATAACCATTTCAAAGATATCTTG
TGCATCCATAACCCTTCCTTCTTTGCATAGAGTGTTTATTATTGAACTGAAGAAC-GCAATGTCAGGACGAGGAATACCT
TTGTTCGTCATTTCAGAAACCAGCCCCTTAGCTTTAACCAAATCACCATGCATACAAAAGCCCTGAATTAAGGAGTGATA
AACAGTTGTGTCCGGCTGAACACCCATATCAGTCATCTCATTGAACTTGTCCATAGCATCGGCCAGCCTACGCAATCTGC
AAAATGCGGCTATTACAGTGGAATAGGTGACTACATCAGGACTCACTCCTTTTTCCCGCATTTCGGTA-AATATGAGCAT
AGCTTCACCCATCATTCCATGTTTAGCATATGCATCAATTAATATGTTGAAAACATAACAGTTGGCTGCAATACCATTGT
CTTCCATTGAATTAAAGAGATTAATCATATCAACAAAGCATCCTTCGGTGGCATATCCATGAAGCAGAATAGAGTATGCG
ATGATATTAGGTTTGAGGCCTTTGGCAGTCATGGAACAAAAAATGTCTAACGCTTCTTTGCTTCTTCCATGCTTGCAAAG
GGAAGTCATTAACGAGCTGCAAGTAACAATATCTGGTATAAGACCCCGGGTTGTCATTTTTCTGAGCATTTTAGTACCCT
CTCTTAACTGCCCTGATTTCGAATATCCATGGATCATGCAATTATATGTCACTTCATTGGGTTGAGCACCATTATCAACC
ATCTGCCGAAGGACAATCTCTGCCTTGTCCATTGCTCTGGCCTTGCACAAGGCATGAATAATCGAGTTAAATGTCACGAC
ATCGGGCACAACCCCTTGATGGATCATTTCATGGAAT
>chr1B_567
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-----------------------------------------GAGTTAGTCTGATATGCAATGTGTCACTTAGTCAACCAA
ATCCATCAAAAAACTGATACTTTGCAGGGAGAAATTTCACATCCTCCTTATATTTCCCTTTCCTTGAAAAGAGAGACAAC
ATCAGTGAAGTAGTTGAAGCTTCAAGTAGCATGTTCTTCCCGTCAAGTTTCAACAAATAAAGTCCGGCCATGGTGATCTC
ACCTTTTTG-AGCAAAATTCTGATAATACTATTTATAAGACGAGAGCAGGGAGCTATACCATTCCTGTCCATTGCTGAGA
ACATATTGTTAGCATCTTCCACTGCTCCATCTTTTAGAATATTTATTATCATTACTCCATAAGTCGAAGCATTAGGAACC
AACCCACTCGCTGATATAGCAGCAAACAAATCTTTAGCTTCCTCTTTTCTTTTAACCTTGTACATTGCATTGATCATGGT
ATTGATTATTGAAATATTGAACTTCACATTCATTGCAACTAATTTCTGGTACAGGTCGATCGCTTCTTCTGCACAATTGT
TTCTAGAAAGACCTGCAAGTATAATATTGTATGTGGAAATGCTCACTGTTATTCCGCTTTCGATCATATCATGGAACATT
TTCCTTGCAGCAACAGTTCTCCCAGCACGAAACAACCCATCCAGTATGATCCCATATGTGGCACTGTCAGGTTTTATTCT
CTTACGTGGCATTTGTCTGAACAGAGTCAAACCATCATCGATCCTTCCATTTCTAGAATAGCCATTAACAAGTGTATTAT
ATGTAACAACATTAGGCTCAATGCCAGCTGACAACATGGCATCAAGTACTCCAAATGCTTTATCCATCTTGCCGACTAAG
CAATGTCCGTCAATCAGTGAGTTAAATGTAATGACATCAGGCTTCCCATCTATGATTATAACCAATTCAAAGATATCTTG
TGCATCCATAATCCTTCCTTCTTTGCACAAATAGTTTATAACTGAATTGAAGAAC-ACAATGTTGGGACGAGGAATACCT
TTGCTTATCATGTCAGAAACTAACTCCTTGGCTTTACCCAAATCACCATGCATACAAAAACCCTGAATTAGGGAGTGATA
AACAGCTGTGTTCGGCTGTACACCCATATCAGTCATCTCATTGAACCTGTCCATAGCATCGGCCAGCCTACCCAATCTGC
AAAGTGCGGCTATTACAGTGGCATAGGTGACTACATTGGGACTCACTCCTTTTTCCCGCATTTCCGCA-AATATGTGCAT
TGCATCATCCATCATTCCGCGTTTAGCATATGCATCAATTAATATGGTGAAAACACGGCAGTCGGCTGCAATACCGTTGC
TTTTCATTGAATTAAAGAGATCAATCATATCAGCAAAGCATCCTTCATTGGCATACCCATGAAGCAAAATACGGTACGAG
ACGGCATCCGGTTTGTGGCCCTTGGCAGTCATGGAATAAAATATTTCCGCCGCTTCTTTGCTTCTTCCATGCTTGCAAAG
GGAAGTCATTAACGAGCTGCAAGTGACTGCATTTGGTACAAGACCATGGCTTGTCATTTTTCTAAACATTTTAGCAGCCT
CTTTCAACTGCCCTGATGTGGAATATCCATGGATCATGCAATTATATGTCACATTATTCGGTTGAGCACCACTATCAACC
ATCTGTTGAAGGACTAGCTCTGCCTTGTCCATTGCTCTGGACTTGCACAACGCATCAATAATCGAGCTATACGTGACCAC
ATTGGGCACAACCCCTTGACGGGTCATTTCATGGAAT
>chr1D_567
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-----------------------------------------GAGTTAGTCTGATATGCAATGTGTCACTTAGTCAACCAA
ATCCATCAAAAAACTGATACTTTGCAGGGAGAAATTTCACATCCTCCTTATATTTCCCTTTCCTTGAAAAGAGAGACAAC
ATCAGTGAAGTAGTTGAAGCTTCAAGTAACATGTTCTTCCCGTCAAGTTTCGACAAATAAAGTCCGGCCATGGTGATCTC
ACCTTTTTCCAGCAAAATTCTGATAATACTATTTATAAGACGAGAGCAGGGAGCTATACCATTCCTGTCCATTGCTGAGA
ACATATTGTTAGCATCTTCCACTGCTCCATCTTTTAGAATATTTATTATCATTACTCCATAAGTCGAAGCATTAGGAACC
AACCCACTCGCTGATATAGCAGCAAACAAATCTTTAGCTTCCTCTTTTCTTTTAACCTTGTACATTGCATTGATCATGGT
ATTGATTATTGAAATATTGAACTTCACATTCATTGCAACTAATTTCTGGTACAAGTCGATCGCTTCTTCTGCACAATTGT
TTCTAGAAAGACCTGCAAGTATAATATTGTATGTGGAAATGCTCACTGTTATTCCGCTTTCGATCATCTCATGGAACATT
TTCCTTGCAGCAACAGTTCTCCCAGCACGAAACAACCCATCCAGTATGATGCCATATGTAGCACTGTCAGGTTTTATTCT
CTTACGTGGCATTTGCCTGAACAGAGTCAAACCATCATCGATCCTTCCATTTCTAGAATAGCCATTAACAAGTGTATTAT
ATGTAACAACATTAGGCTCAATGCCAGCTGACACCATGGCATCAAGTACTCCAAATGCTTTATCCATCTTGCCGACTAAG
CAATATCCGTCAATCAGTGAGTTAAATGTAATGACATCAGGCTTCCCATCTATGCTTATAACCAATTCAAAGATATCTTG
TGCATCCATAACCCGTCCTTCTTTGCACAAATAGTTTATAACTGAATTGAAGAAAAACAATGTTGGGACGAGGAATACCT
TTGCTTATCATGTCAGAAACTAACTCCTTGGCTTTAACCAAATCTACATGCATACAAAACCCCTGAATTAGGGAGTGATA
AACAGTTGTGCCCGGCTGAACACCCATATCAATCATCTCATTGAACTTGTCCATAGCATCGGCCAGCCTACCCAATCTGC
AAAGTGCGGCTATTACAGTGGAATAGGTGACTACATTGGGACTCACTCCTTTTTCCTGCATTTCGGTA-AATATGAGCAT
AGCTTCATCCATCATTCCACGTTTAGCATATGCATCAATTAATATGGTGAAAACATGGCAGTCTGCTACAAAACCATTGC
TTTCCATTGAATTGAAGAGATCAATCATATCAGCAAAGCATCCCTCAGTGGCATACCCATGAAGCAAAATACGGTACGAG
ACGGCATCCGGTTTGTGGCCCTTGGCAGTCATGGAATAAAATATTTCTGCCGCTTCTTTGCTTCTTCCATGCTTGCAAAG
GGAAGTCATTAACGAGCTGCAAGTGACTGCATTTGGTACAAGACCATGGCTTGTCATTTTTCTAAACATTTTAGCAGCCT
CTTTCAACTGCCCTGATGTGGAATATCCATGGATCATGCAATTATATGTCACATTATTCGGTTGAGCACCACTATCAACC
ATCTGTTGAAGGACTAGCTCTGCCTTGTCCATTTCTCTGGCCTTGCACAACGCATCAATAATAGAGCTATACGTGACCAC
ATTGGGCACAACCCCTTGATGGATCATTTCATGGAAT
>chr1A_570
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--------------------------------------------TTAGTCTCATATGCAACGTATCAACTAGTCAACCAA
CT-CATCGAAAAATTGATACTTGGCAGGGAGCAATTTCATGTGCTCCTTATATTTGCCTTTCATTGAGAAGAGAGAAAAC
ATCAATGAAGTAGTTGAAGCTTCAAGTGATATGCTCTTCCCATCAACTTTAGACAAATAATATCCGGCCTTGGCGATCTC
ACCTTTTTCCAACAACAATCTGATGATGTCATTGATGAGACGGGAGCTGGGGACTATACCACTCTTGTCCATTGATGAAA
ACACATTGTTAGCATCTTCCACTACTCCATCTTTTAGAAGATTTTTTATCATTACTCCGTAAGTAGATTCATTAGGCACC
AACCCACGGGCTAATATTCCAGCAAATAGTTCCTTAGCTTCTTCTCTTCTCCCAACCTTGTACATTGCATTGATCATGGT
ATTGACTATTGCAATATTGAACTTCACATTCATTGCACCTAATTTGTGGAACAGGGTGATAGCTTCGTCTGCGCAATTAT
TTCTACAAAAACCTCCAAGTATTATAGCGTATATGGAAAAGGTCACTGTTGTTCCACTTTCGATCATCTCATGGAACATT
TTCCATGCAGCAACAGTTCTCCCAGAACGAAACAACCCATCCAGTATGATGCCATATGTAACAGTGTCAGGTTTAATTCT
CTTTCGCGGCATTTCTCTGAACAGAGTCAAACCATCGTCTATCCTTCCATTTTTAAAATAGCCATCAAGCAGTGTACTGT
AAGTAACAATATCAGGCTCAACACCAACTGATTCCATGGCATTAAGCATTCCGAATGCTTTATCCATCTTGCCGACTAAG
CAATATCCGTCAATCAGTGAACTAAATGTAATGGTATCAGGCCTCTCACCTATGTCTATAACCAAGTCAAAGATATCATG
TGCATCCATAACCCTTCCTTCTTTGCACAGACTGTTTATTACTGAATTGAAGAAC-ACAATGTTAGGACAAGGAATACCT
TTGTTCATCATTTCAGAAACCAGCTCCTTGGCTTTAACCAAATCACCATCGATGCAAAAACCCTGAATCAGGGACTGATA
AACAGGTATGCTTGGCTGTACTCCCATTGCAATCATCTCATCAAATTTGTCCACAGCATCGGTCAACCTACCCATTCTGG
AAAGTGCGGCTATTACAGTGGTATAGGTGACTACATCAGGACTCACTCCTTTTTCCCGCATTTCAGTA-A-TATCAGCAC
AGCTTCATCCATCATTCCACGTTTAGCATATCCATTAATTAATATGTTGAAAACATGGCAGTCGGCTGCAATACCGTTGC
TTTTCATTGAATTAAAGAGATCAATCATATCAGCAAAGCATCCTTCATTGGCATACCCATGAAGCAAAATAGAGTATGAG
ACGACATTAGCTCTGTGGCCTTTGGCAGTCATGGAATCAAATATTTGTCTAGCTTCTTTGCTTCTTCCATGCTTGCAAAG
GGAAGTCATTAACGAGCCGCAGGTAACAATATTTGGTGTAACACCCCGGCTTTTCATTTCTCTGAACATTTTAGCAGCCT
CTTTCAACCGCCCAGATGTGGCATATCCATTGATCATGCAATTATATGTCACTGTATCGGGTTGAGCACCTTTAGCAACC
ATCTGACGAAGGACTAGCTCTGCCTTGTCCATTGCTCTGGCCTTGCACAATGCATCAATAATCGAGTTATACGTCCACAC
ATCGGGCTCAATCCCTTGCTGCATCATTTCATGGAA-
>chr1D_583
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---------------------------------------------------------CAATGCATCTTTTAGTCAACCAA
ATCCATTGAAAAATTGATACTTTGCAGGAAGCAATTCAATGTTTTCCCGGTATTTCCCTTCCCTTGAAAAGAGAGACAAC
AACAAAGAAGTAGTTGAAGCTTCAAGTGAGATGATCTTCCCATCAACTTTAGATAAATAATTCCCGGCCCTGGCAATCTC
ACCTTTTTCCAACAACATTCTGATGACATAATTTATAAGACGAGAATTGGGTGCACAACCACTCTTCTCCATTGATGAAA
ACATATTGTCAACTTCTTCCACTGATCCTTCCTTTAGAATATTTTCTATCATTATACCGTAAGTAGAAGCATTAGGCACC
AACCCACTGGCTGATATTGCAGAAAACAAATCGTTAGCTTCTTCTCTTCTCCGAACCTTGAACATTGCATTAATCATGGT
ATTGAGTGTTATAATATCGAACTTGACATTCCTTGCTCCTAATTTCTGGAATAGTGCGATCGCTTCGTCTGCACAATTAT
TTCTACAAAGACCACGAAGTATTATATTGTATATGGAAATGCTCACTGGTATACCCCTTTCGGTCATCTCATGGAACATT
TCCCTTGCAGCAACAGTTCTGCCAGCACGGAACAACCCATCCAGCATGATGCCATATGTAACAGTGTCAGGTTTAATTCT
CTTGTGTGGCATTTCTCTGAACAGAATCAAAGCATCATTGATCCTTCCATTTCTACAATAGCCATCAAGTAGTGAACTAT
ACGTAACAACATTAGGCTCAATGCCAGCTGATACCATGGCATCAAGCACTCCAAGTGCTTTACCCATCTGGCCGACTAAG
CCATATCCGTCAATCAGTGAACTGAATATAATGACATTAGGCCTCTCGCCCATGCCTATAACCAAGTCAAAGATACCTTG
TGCATTCATAACCCTTCCTTCTTTGCATAAAGAGTTTATTACTGAAGTGAAGAAC-GCAATGTCAGGACGAGGAATACCT
TTGTTCATCATTTCAGAAACAAATTCCTTAACTTTAACCAAATCACCAAGCATACAAAAACCCTGAATTAGGGAGCGATA
AACAGCTGTGTTCGGCTGTACACCCATATCAGTCATCTCATTGAACCTGTCCATAGCATCGGACAGCCTACCCAATCTGC
AAAGTGCGGCTATTACAGTGGAATAGGTGACTACATTGGGACTCACTCCTTTTTCCCGCATTTCAGTA-AATATGAGCAT
AGCTTCATCCATCATTCCACGTTTAGCATATGCATCAATTAATATGGTGAAAACATGGCAGTCGGCTACAAAACCATTGC
TTTCCATTGAATTAAAGAGATCAATCATATCAGCAAAGCATCCTTCATTGGCATACCCATGAAGCAAAATACAGTAGGAG
TTGACATT---TCTGTGGCCTTTGGCAGTCATGGCATCAAAAAATTCTGCAGCTTCTTTGCTTCTTCCATGCTTACAAAG
GTAAGTCATTAAGGCGTTGCAAGTAAAAGTATCTGGTATAAGGCCCCGGCTTTTCATTTCTCTAAACAATTTAGCAGCCT
CTTTCCACCTCCCAGATGTGGAATATCCATGGATCATGCAATTATATGTCACATTATTGGGTTGAACACCTTTGTTAACC
ATCTGCTGAAGCACTAGCTCTGCCTTGTCCATTGCTCTGGCCTTGCACAATGCATCAATGATTGAGCTATATGTCCACAC
ACTGGGCTCAACACCTTGGTGCATCATTTCATGGAA-
>chr1D_589
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---------------------------------------------------------------ATCAACTAGTCAACCAA
ATCCATCAAAAAATTGATACTTTGCAGGGAGCAACTTAATATCCTCCTGATGTTTCCCTTTCCTTGAAAAGAGAGACAAC
ATCAATGAGGCAGTTGAAGCTTCAAGTGAGATACTCTTCCCATCAACTTTAGACAAATAATTTCCAGCCTTGGCTATCTC
ACCTTTTTCCAACAACATTCTGATGATATCATTTATAAGACGGGAACTGGGAACGATACCACTGTTGTCCATTGATGAAA
ACATATTGTCAGCATCTTCCACTGCTCTGTCTTTTAGAAGAATTTTTATCATTACTGCATAAGTAGATTCATTGGGCACC
AAGCTACTGGGTGATATTGCAGCAAACAAATCCTTAGCTTCTTCTCTTCTCCCAACCTTGTACATTGCATTAATCATGGT
ATTGAGTATTGCAATATCAAACTTCACATTCATTGTTCCTAATTTCTGGAACAGGGTGATAGCTTCGTCTGCACAATTAT
TTCTACAAAGACCTCCAAGTATTATACTGTATGTGGAAATACTCACTGTTATTCCACTTTCCGTCATCTCATGGAACATT
TTCCTAGCAGCAACAGTGCTCCCAGAACGAAACAACCCATCCAGTATGATGCCATATGTTACAGTGTCAGGTTTAATTCT
CTTATGCGGCATTTCTCTAAACAGGGTCAAACCATCATCGATCCTTCCGTTTGTACAGTAGCCATTAACAAGTGTATTAT
ATGTAACCACATTAGGCTCAATGCCAAATGATACCATGGAATCAAGCACTCTGAGTGCTTTATCCATCTTATCAACTAAG
CAATATCCGTCAATCAGTGAATTAAATGTAATGACATCAGGCCTCTCACCCATGTCTATAACAAGGTCAAAGATATCATG
TGCATCCATAACCCTGCCTTCTTTGCATAAATAGTTTATCACTGAACTGAAGAAC-GCAATGCTAGGACGAGGAATACCT
TTGTTCATCATTTCAGAAACCAGCTCCTTGGCTTTAACCAAATCACCATGTATACAACAACCCTGAATCAGGGAGTGATA
AACAGCTGTGTCCGGTTGAACTCCCATGGCAATCATCTGACTTAACTTGCCCATAGCATCGGTCAACCTACCCATTCTGG
AAAGTGCGGCTATTACAGTGGAATAGGTGAACGCATCGGGACCTACTCCTTTTTCCCGCATTTCCGTAAA-TATGAGCAT
AGCTTCATCCGTCATTCCATGTTTAGCATACGCATCGATTAATATGTTGAAAACAC-GCAGTCGGCTGCAATGCCATTCC
TTTCCATTGCATTAAAGAGGTCAATCATATCAGCAAAGCATCCTTCAGTAGCATACCCATGAAGCAAAATACGGTATGAG
ACGATATCCGGTTTGTGGCCCTTGGCGGTCATGGAATCAAAAAATTCTGCAGCTTCTTTGCTTCTTCCATGCTTGCAAAG
GGAGGACAGGAAGGAGTTGCAAGTAACAATATCTGGCATAAGACCCCGGCTTTTCATTTCTCTGAACATTTTAGCAGACT
CTTTCAACCGCCCAGATGTGGCATATCCATTGATCATGCAATTATATGTCACTGTATCGGGTTGAGCACCATTAGCAACC
ATCTGCCGAAGGACTAGCTCTGCCCTGTCCATTGCTCTGGCCTTGCACAACGCATCAATGATCGAGCTATATGTCACCAC
ACTGGGCACAATCCCTTGCTGCATCATTTCATGGAAT
>chr1D_589
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---------------------------------------------------------------ATCAACTAGTCAACCAA
ATCCATCGAAAAATTGATACTTTGCAGGGAGCAACTTAATATCCTCCTGATGTTTCCCTTTCCTTGAAAAGAGAGACAAC
ATCAATGAGGTAGTTGAAGCTTCAAGTGAGATCCTCTTCCCATCAACTTTAGACAAATAATTTCCAGCCTTGGCTATCTC
ACCTTTTTCCAACAACATTCTGATGATATCATTTATAAGACAGGAACTGGGAATGATACCACTGTTGTCCATTGATGAAA
ACATATTGTCAGCATCTTCCACTGCTCCGTCTTTTAGAAGATTTCTTATCATTACTGCATAAGTAGATTCATTGGGCACC
AACCCATTGGCTGACATTGCAGAAAACAAATCCTTAGCCTCTTCCTTTCTTTGAACCGTGTACATTGCATTAATCATGGT
ATTGAGTATTTTAATATTTAACTTCACATTCATTGCTCGTAATTTCTGGAACAGTGTGATCGCTTCGTCTGCACACTTAT
TTCTACAAAGACCTCCCAGTATTATATTGTATGTGGAAATGTCCACCGTTGTTCCACTCTCGTTCATCTCATGGAACATT
TTCTTTGCGGCAACAGTTCTCCCAGCACGAAACAACCCATCCAACATGATGCCATATGTAACAGTGCCAGGTTTAATTCT
CTTACGCGGCATTTCTCTAAACAAAGTCAAAGCATCATCAATCCTTCTGTTTTTAAAATAGCCATCAAGAAGTGCACTAT
AAGTAACAACATCAGACTCAACACCAACTGATTTCATGACATCAAGTATTTTGAATGCTTTATCCGTCTTCCCGACTAAG
CAATATCCGTCAATCAGTGAATTAAATGTAATGACATCAGGCCTCTCACCTATGCCTATAACCAAGTCTAAGACATCATG
TGCATCCATAACCCTTCCTTCTTTGCACAGACTGTTTATTACTGAATTGAAGAAC-ACAATGTTAGGCCGAGGAATACCA
CCGTTCATCATTTCAAACATCAGCTCCTTAGCTTTAACCAAATCACCGTCTATGCAACAACCCTGAATCAGTGAGTGATA
AACAGTTGTGTCCGGCTGTACTTCCAAGGCAGTCATCTCATTGAATTTCTCAATAGCATCGGTCAGCCTACCCATTCTGG
AAAGTGCGGCTATTACAATGGAATAGGTGACTACATCTGGACTCACTCCTTGTCCCCGCATTTCAGTA-AATATCAGCAT
AGCTTCTTCTGTCATTCCACGTTTTGCATATCCATTAATTAATATGTTGAAAACATGGCAGTCAGCTGCAATACCGTTGC
TTTCCATTGAATTAAAGAGATCAATCATATCAGCAAAGCATCCTTCACTGGCATACCCATGAAGCAAAATACGGTATGAT
ACGATATCTGGTTTGTGGCCCTTGGCAGTCATGGAATCAAGAAATTCTGCAGCTTCCTTGCTTCTCCCATGCTTGCAAAG
GGAGGCCAGGAACGAGTTGCGAGTGACAATATCTGGTATAAGGTCCCGGCTTTTCATTTCTCTAAGCAATTTAGCAGCCT
CTTTCGACTGCCCAGATGTGGAATATCCATGGATCATGCAATTATATGTCACATTATTGGGTTGAACACCTTTGTTAACC
ATCTGCTGAAGCACTAGCTCTGCCTTGTCCATTGCTCTGGCCTTGCACAATGCATCAATGATTGAGCTATATGTCCACAC
ACTGGGCTCAACACCTTGCTGCATCATTTCATGGAA-
>SNPs
-SSS-SSSSSSSSSS-----------------------------------------S------S----------------
S--------------------------------------------------------------------S--S-------
-----------------S---------------------------S-----------S---S-------S----------
-------------------------S-S-S-------S-SS-----------S--S----------SS-------S----
-S--------------S--------S--S-------------------S--------S-----S--------S-------
-----------------------SS------S------S---------S-SS----------------------------
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-----------------------S--------------S------------------------S-----------S----
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
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-----------------------------------------------------------------------S--------
------------------------------------------------------------S-------------------
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-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------S------------------------------------------------------------------
-------------------------------------------------------S------------------------
-----------------S--------------S------------------------------S----------------
-------------------------------------
>forward_81
-------------------------------------------------------------TACCGGGACAACCACCTAC
T-------------------------------------------------------------------------------
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>reverse_2141
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------------------------------------------------------------CACCCATCTGGCCGACTAAG
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-------------------------------------
